[GitHub] [beam] kennknowles opened a new issue, #19141: Tensor flow Chicago taxi failing for 117MB data with IndexOutOfBoundException on Flink MemorySegment

[GitBox <gi...@apache.org>]

kennknowles opened a new issue, #19141:
URL: https://github.com/apache/beam/issues/19141

   Relevant Stack trace: 
   
    
   ```
   
   [flink-runner-job-server] ERROR org.apache.beam.runners.flink.FlinkJobInvocation - Error during job
   invocation BeamApp-goenka-1114034940-664c45b0_33f1a6cc-adad-47ec-8742-0fbb2617d705. org.apache.flink.client.program.ProgramInvocationException:
   Job f80127168dd5f8eea7c071539e642cc8 failed. at org.apache.flink.client.program.rest.RestClusterClient.submitJob(RestClusterClient.java:265)
   at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:464) at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:452)
   at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:427) at org.apache.flink.client.RemoteExecutor.executePlanWithJars(RemoteExecutor.java:216)
   at org.apache.flink.client.RemoteExecutor.executePlan(RemoteExecutor.java:193) at org.apache.flink.api.java.RemoteEnvironment.execute(RemoteEnvironment.java:173)
   at org.apache.beam.runners.flink.FlinkJobInvocation.runPipeline(FlinkJobInvocation.java:117) at org.apache.beam.repackaged.beam_runners_flink_2.11.com.google.common.util.concurrent.TrustedListenableFutureTask$TrustedFutureInterruptibleTask.runInterruptibly(TrustedListenableFutureTask.java:111)
   at org.apache.beam.repackaged.beam_runners_flink_2.11.com.google.common.util.concurrent.InterruptibleTask.run(InterruptibleTask.java:58)
   at org.apache.beam.repackaged.beam_runners_flink_2.11.com.google.common.util.concurrent.TrustedListenableFutureTask.run(TrustedListenableFutureTask.java:75)
   at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
   at java.lang.Thread.run(Thread.java:748) Caused by: org.apache.flink.runtime.client.JobExecutionException:
   Job execution failed. at org.apache.flink.runtime.jobmaster.JobResult.toJobExecutionResult(JobResult.java:146)
   at org.apache.flink.client.program.rest.RestClusterClient.submitJob(RestClusterClient.java:262) ...
   13 more Caused by: java.lang.Exception: The data preparation for task 'GroupReduce (GroupReduce at GenerateStatistics/RunStatsGenerators/CommonStatsGenerator/CombinePerKey/GroupByKey)'
   , caused an error: Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due
   to an exception: null at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:479) at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:368)
   at org.apache.flink.runtime.taskmanager.Task.run(Task.java:712) ... 1 more Caused by: java.lang.RuntimeException:
   Error obtaining the sorted input: Thread 'SortMerger Reading Thread' terminated due to an exception:
   null at org.apache.flink.runtime.operators.sort.UnilateralSortMerger.getIterator(UnilateralSortMerger.java:650)
   at org.apache.flink.runtime.operators.BatchTask.getInput(BatchTask.java:1108) at org.apache.flink.runtime.operators.GroupReduceDriver.prepare(GroupReduceDriver.java:99)
   at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:473) ... 3 more Caused by: java.io.IOException:
   Thread 'SortMerger Reading Thread' terminated due to an exception: null at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:831)
   Caused by: java.lang.IndexOutOfBoundsException at org.apache.flink.core.memory.HybridMemorySegment.put(HybridMemorySegment.java:232)
   at org.apache.flink.runtime.memory.AbstractPagedOutputView.write(AbstractPagedOutputView.java:192) at
   org.apache.beam.runners.flink.translation.wrappers.DataOutputViewWrapper.write(DataOutputViewWrapper.java:48)
   at java.io.DataOutputStream.write(DataOutputStream.java:107) at java.io.ByteArrayOutputStream.writeTo(ByteArrayOutputStream.java:167)
   at org.apache.beam.sdk.coders.LengthPrefixCoder.encode(LengthPrefixCoder.java:58) at org.apache.beam.sdk.coders.IterableLikeCoder.encode(IterableLikeCoder.java:98)
   at org.apache.beam.sdk.coders.IterableLikeCoder.encode(IterableLikeCoder.java:60) at org.apache.beam.sdk.coders.Coder.encode(Coder.java:136)
   at org.apache.beam.sdk.coders.KvCoder.encode(KvCoder.java:71) at org.apache.beam.sdk.coders.KvCoder.encode(KvCoder.java:36)
   at org.apache.beam.sdk.util.WindowedValue$FullWindowedValueCoder.encode(WindowedValue.java:529) at org.apache.beam.sdk.util.WindowedValue$FullWindowedValueCoder.encode(WindowedValue.java:520)
   at org.apache.beam.sdk.util.WindowedValue$FullWindowedValueCoder.encode(WindowedValue.java:480) at org.apache.beam.runners.flink.translation.types.CoderTypeSerializer.serialize(CoderTypeSerializer.java:83)
   at org.apache.flink.api.java.typeutils.runtime.TupleSerializer.serialize(TupleSerializer.java:125) at
   org.apache.flink.api.java.typeutils.runtime.TupleSerializer.serialize(TupleSerializer.java:30) at org.apache.flink.runtime.operators.sort.LargeRecordHandler.addRecord(LargeRecordHandler.java:214)
   at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ReadingThread.go(UnilateralSortMerger.java:982)
   at org.apache.flink.runtime.operators.sort.UnilateralSortMerger$ThreadBase.run(UnilateralSortMerger.java:827)
   [grpc-default-executor-21] INFO org.apache.beam.runners.flink.FlinkJobInvoker - Invoking job BeamApp-goenka-1114035621-e0778462_36ecd5e4-ead8-4ef0-a689-4b82e7b0194a
   
   ```
   
    
   
   Imported from Jira [BEAM-6060](https://issues.apache.org/jira/browse/BEAM-6060). Original Jira may contain additional context.
   Reported by: angoenka.


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