svn commit: r1662484 - /incubator/taverna/site/trunk/content/introduction/taverna-in-use/systems-biology.md

[br...@apache.org]

Author: brenninc
Date: Thu Feb 26 15:33:01 2015
New Revision: 1662484

URL: http://svn.apache.org/r1662484
Log:
Added MetWare

Added:
    incubator/taverna/site/trunk/content/introduction/taverna-in-use/systems-biology.md

Added: incubator/taverna/site/trunk/content/introduction/taverna-in-use/systems-biology.md
URL: http://svn.apache.org/viewvc/incubator/taverna/site/trunk/content/introduction/taverna-in-use/systems-biology.md?rev=1662484&view=auto
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--- incubator/taverna/site/trunk/content/introduction/taverna-in-use/systems-biology.md (added)
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+Title:     Systems biology
+Notice:    Licensed to the Apache Software Foundation (ASF) under one
+           or more contributor license agreements.  See the NOTICE file
+           distributed with this work for additional information
+           regarding copyright ownership.  The ASF licenses this file
+           to you under the Apache License, Version 2.0 (the
+           "License"); you may not use this file except in compliance
+           with the License.  You may obtain a copy of the License at
+           .
+             http://www.apache.org/licenses/LICENSE-2.0
+           .
+           Unless required by applicable law or agreed to in writing,
+           software distributed under the License is distributed on an
+           "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+           KIND, either express or implied.  See the License for the
+           specific language governing permissions and limitations
+           under the License.
+
+Taverna is used by various projects and researchers for investigations into systems biology:
+
+ - [ENFIN – Enabling Systems Biology[(/introduction/taverna-in-use/biology#enfin) – 
+      calling of wrapped tools within workflows
+ - [Manchester Centre for Integrative Systems Biology](/introduction/taverna-in-use/biology/manchester-centre-for-integrative-systems-biology/)
+      (MCISB) – modelling metabolomic pathways
+ - [Systems Biology Operational Software](/introduction/taverna-in-use/biology#sb-os) 
+      (SB.OS) – a live DVD based on Ubuntu Linux that comes with a comprehensive list of Systems Biology Software 
+      (including Taverna)
+ - [MetWare](#metware) - applications, databases and workflows for metabolomics
+ - [Tav4SB](/introduction/taverna-in-use/biology#tav4sb) - Taverna workflows for systems biology, 
+      in particular for analysis of the kinetic models of biological systems
+ - [CCPN](/introduction/taverna-in-use/biology#ccpn) - Taverna is used to encapsulate and combine protocols between 
+      WeNMR (Worldwide e-Infrastructure for NMR and structural biology) portals and CCPN's 
+     (Collaborative Computing Project for NMR) software. 
+
+<a name="metware"></a>
+##MetWare
+
+The MetWare project provides applications, databases and workflows for metabolomics. 
+The MetWare project is a collaboration between several metabolomics groups in the Netherlands and Germany.
+
+The work involving Taverna workflows is done by 
+   [Steffen Neumanns group (Bioinformatics &amp; Mass Spectrometry)](http://www.ipb-halle.de/en/research/stress-and-developmental-biology/all-staff/).
+
+They developed a Web-based player of Taverna workflows and also have uploaded their workflows on myExperiment at 
+   <http://www.myexperiment.org/users/937/workflows>.
+
+[Software project page](http://sourceforge.net/apps/mediawiki/metware/index.php?title=Main_Page) can be found at Sorceforge.
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