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Posted to commits@mxnet.apache.org by GitBox <gi...@apache.org> on 2020/01/20 02:59:07 UTC
[GitHub] [incubator-mxnet] heaseny opened a new issue #17384: Error in numpy
unit test
heaseny opened a new issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384
## Description
When I ran the test nosetests -s -v tests/python/unittest/test_numpy_interoperability.py:test_np_fallback_ops
, it raised error "TypeError: No loop matching the specified signature and casting
was found for ufunc inv"
### Error Message
nosetests -s -v tests/python/unittest/test_numpy_interoperability.py:test_np_fallback_ops
test_numpy_interoperability.test_np_fallback_ops ... [INFO] Setting test np/mx/python random seeds, use MXNET_TEST_SEED=94434600 to reproduce.
ERROR
======================================================================
ERROR: test_numpy_interoperability.test_np_fallback_ops
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/mxnet/anacondaenv/anaconda3_mxnet/envs/mxnet_daily_py3/lib/python3.6/site-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/home/mxnet/workspace/source/intel-mxnet/tests/python/unittest/common.py", line 215, in test_new
orig_test(*args, **kwargs)
File "/home/mxnet/anacondaenv/anaconda3_mxnet/envs/mxnet_daily_py3/lib/python3.6/site-packages/mxnet-1.6.0-py3.6.egg/mxnet/util.py", line 321, in _with_np_shape
return func(*args, **kwargs)
File "/home/mxnet/anacondaenv/anaconda3_mxnet/envs/mxnet_daily_py3/lib/python3.6/site-packages/mxnet-1.6.0-py3.6.egg/mxnet/util.py", line 505, in _with_np_array
return func(*args, **kwargs)
File "/home/mxnet/workspace/source/intel-mxnet/tests/python/unittest/test_numpy_interoperability.py", line 1916, in test_np_fallback_ops
check_interoperability(op_list)
File "/home/mxnet/workspace/source/intel-mxnet/tests/python/unittest/test_numpy_interoperability.py", line 1881, in check_interoperability
_check_interoperability_helper(name, *workload['args'], **workload['kwargs'])
File "/home/mxnet/workspace/source/intel-mxnet/tests/python/unittest/test_numpy_interoperability.py", line 1851, in _check_interoperability_helper
out = onp_op(*args, **kwargs)
File "/home/mxnet/anacondaenv/anaconda3_mxnet/envs/mxnet_daily_py3/lib/python3.6/site-packages/numpy/linalg/linalg.py", line 1730, in cond
invx = _umath_linalg.inv(x, signature=signature)
TypeError: No loop matching the specified signature and casting
was found for ufunc inv
-------------------- >> begin captured logging << --------------------
root: INFO: NumPy-shape semantics has been activated in your code. This is required for creating and manipulating scalar and zero-size tensors, which were not supported in MXNet before, as in the official NumPy library. Please DO NOT manually deactivate this semantics while using `mxnet.numpy` and `mxnet.numpy_extension` modules.
common: INFO: Setting test np/mx/python random seeds, use MXNET_TEST_SEED=94434600 to reproduce.
--------------------- >> end captured logging << ---------------------
----------------------------------------------------------------------
Ran 1 test in 0.005s
FAILED (errors=1)
Dispatch test: heaviside
Dispatch test: spacing
Dispatch test: linalg.cond
## To Reproduce
### Steps to reproduce
nosetests -s -v tests/python/unittest/test_numpy_interoperability.py:test_np_fallback_ops
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[GitHub] [incubator-mxnet] haojin2 commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
haojin2 commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-580906058
Since it's an issue related to numpy itself, we can probably change our test to skip this test for earlier numpy versions without having to change the requirements for just this one test, what do you think?
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[GitHub] [incubator-mxnet] TaoLv commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
TaoLv commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-578503102
Can we close this issue now or do you think we need another fix? I notice that mxnet requires numpy 1.16.0 - 2.0.0: https://github.com/apache/incubator-mxnet/blob/master/python/setup.py#L33
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[GitHub] [incubator-mxnet] heaseny commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
heaseny commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-578337820
Thank for your solution, I tried and found the case could be successfull with latest numpy.
------------------
Thanks,
Xuecun
-------- 原始邮件 --------
发件人：Hao Jin <no...@github.com>
时间：2020年1月25日 05:56
收件人：apache/incubator-mxnet <in...@noreply.github.com>
抄送：heaseny <ya...@aliyun.com>,Mention <me...@noreply.github.com>
主题：Re: [apache/incubator-mxnet] Error in numpy unit test (#17384)
>@heaseny Hi, I just got the chance to try this out, and I was able to hit the same error, I'll be working on a fix for this, thanks for reporting the issue!
>
>—
>You are receiving this because you were mentioned.
>Reply to this email directly, view it on GitHub, or unsubscribe.
>
>[ { "@context": "http://schema.org", "@type": "EmailMessage", "potentialAction": { "@type": "ViewAction", "target": "https://github.com/apache/incubator-mxnet/issues/17384?email_source=notifications\u0026email_token=AIR7JIWEN7NUJB3NAEL4F5TQ7NPW7A5CNFSM4KI5OIXKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEJ4GYHI#issuecomment-578317341", "url": "https://github.com/apache/incubator-mxnet/issues/17384?email_source=notifications\u0026email_token=AIR7JIWEN7NUJB3NAEL4F5TQ7NPW7A5CNFSM4KI5OIXKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEJ4GYHI#issuecomment-578317341", "name": "View Issue" }, "description": "View this Issue on GitHub", "publisher": { "@type": "Organization", "name": "GitHub", "url": "https://github.com" } } ]
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[GitHub] [incubator-mxnet] haojin2 commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
haojin2 commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-578317341
@heaseny Hi, I just got the chance to try this out, and I was able to hit the same error, I'll be working on a fix for this, thanks for reporting the issue!
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[GitHub] [incubator-mxnet] heaseny commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
heaseny commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-578544269
I think the requirement of numpy in setup.py should be updated due to this issue. Can I get further feedback?
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[GitHub] [incubator-mxnet] haojin2 commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
haojin2 commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-576454166
Hi, I'm not able to reproduce with latest master branch, which branch were you using? and what kind of build are you using?
```
nosetests -s -v tests/python/unittest/test_numpy_interoperability.py:test_np_fallback_ops
test_numpy_interoperability.test_np_fallback_ops ... Dispatch test: heaviside
Dispatch test: spacing
Dispatch test: linalg.cond
ok
----------------------------------------------------------------------
Ran 1 test in 0.007s
OK
```
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[GitHub] [incubator-mxnet] heaseny commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
heaseny commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-581006263
Thanks for your suggestion, this makes sense, I will close this issue.
------------------
Thanks,
Xuecun
-------- 原始邮件 --------
发件人：Hao Jin <no...@github.com>
时间：2020年2月1日 04:50
收件人：apache/incubator-mxnet <in...@noreply.github.com>
抄送：heaseny <ya...@aliyun.com>,Mention <me...@noreply.github.com>
主题：Re: [apache/incubator-mxnet] Error in numpy unit test (#17384)
>Since it's an issue related to numpy itself, we can probably change our test to skip this test for earlier numpy versions without having to change the requirements for just this one test, what do you think?
>
>—
>You are receiving this because you were mentioned.
>Reply to this email directly, view it on GitHub, or unsubscribe.
>
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[GitHub] [incubator-mxnet] heaseny closed issue #17384: Error in numpy unit
test
Posted by GitBox <gi...@apache.org>.
heaseny closed issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384
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[GitHub] [incubator-mxnet] haojin2 commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
haojin2 commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-578335214
@heaseny Have you tried with the latest 1.18 version of numpy? I think it should solve the issue, after some investigation I found that the error is caused by numpy 1.17 being not able to handle the same input case.
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[GitHub] [incubator-mxnet] TaoLv commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
TaoLv commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-581036652
> Since it's an issue related to numpy itself, we can probably change our test to skip this test for earlier numpy versions without having to change the requirements for just this one test, what do you think?
I‘m afraid it's a real issue that the users may encounter in their use cases.
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[GitHub] [incubator-mxnet] heaseny commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
heaseny commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-576484737
The test can fail with numpy==1.16.4, so should I upgrade my numpy?
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[GitHub] [incubator-mxnet] haojin2 commented on issue #17384: Error in numpy
unit test
Posted by GitBox <gi...@apache.org>.
haojin2 commented on issue #17384: Error in numpy unit test
URL: https://github.com/apache/incubator-mxnet/issues/17384#issuecomment-576485062
I have 1.18.1, I'll try with my numpy downgraded.
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