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Posted to issues@arrow.apache.org by "Yaron Gvili (Jira)" <ji...@apache.org> on 2022/06/07 12:49:00 UTC
[jira] [Created] (ARROW-16770) Arrow Substrait test fails with SIGSEGV, possibly due to gtest 1.11.0
Yaron Gvili created ARROW-16770:
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Summary: Arrow Substrait test fails with SIGSEGV, possibly due to gtest 1.11.0
Key: ARROW-16770
URL: https://issues.apache.org/jira/browse/ARROW-16770
Project: Apache Arrow
Issue Type: Bug
Components: C++
Reporter: Yaron Gvili
I built Arrow using the instructions in the Python development page, under the pyarrow-dev environment, and found that `arrow-substrait-substrait-test` fails with SIGSEGV - see gdb session below. The same Arrow build and runs correctly on my system, outside of pyarrow-dev. I suspect this is due to something different about gtest 1.11.0 as compared to gtest 1.10.0 based on the following observations:
# The backtrace in the gdb session shows gtest 1.11.0 is used.
# The backtrace also shows the error is deep inside gtest, working on an `UnorderedElementsAre` expectation.
# My system, outside pyarrow-dev, uses gtest 1.10.0.
{noformat}
$ gdb --args ./release/arrow-substrait-substrait-test
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Reading symbols from ./release/arrow-substrait-substrait-test...
(gdb) run
Starting program: /mnt/user1/tscontract/github/rtpsw/arrow/cpp/build/debug/release/arrow-substrait-substrait-test
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/lib/x86_64-linux-gnu/libthread_db.so.1".
[New Thread 0x7ffff41ff700 (LWP 115128)]
Running main() from /home/conda/feedstock_root/build_artifacts/gtest_1647154636757/work/googletest/src/gtest_main.cc
[==========] Running 33 tests from 3 test suites.
[----------] Global test environment set-up.
[----------] 4 tests from ExtensionIdRegistryTest
[ RUN ] ExtensionIdRegistryTest.RegisterTempTypes
[ OK ] ExtensionIdRegistryTest.RegisterTempTypes (0 ms)
[ RUN ] ExtensionIdRegistryTest.RegisterTempFunctions
[ OK ] ExtensionIdRegistryTest.RegisterTempFunctions (0 ms)
[ RUN ] ExtensionIdRegistryTest.RegisterNestedTypes
[ OK ] ExtensionIdRegistryTest.RegisterNestedTypes (0 ms)
[ RUN ] ExtensionIdRegistryTest.RegisterNestedFunctions
[ OK ] ExtensionIdRegistryTest.RegisterNestedFunctions (0 ms)
[----------] 4 tests from ExtensionIdRegistryTest (0 ms total)
[----------] 21 tests from Substrait
[ RUN ] Substrait.SupportedTypes
[ OK ] Substrait.SupportedTypes (0 ms)
[ RUN ] Substrait.SupportedExtensionTypes
[ OK ] Substrait.SupportedExtensionTypes (0 ms)
[ RUN ] Substrait.NamedStruct
[ OK ] Substrait.NamedStruct (0 ms)
[ RUN ] Substrait.NoEquivalentArrowType
[ OK ] Substrait.NoEquivalentArrowType (0 ms)
[ RUN ] Substrait.NoEquivalentSubstraitType
[ OK ] Substrait.NoEquivalentSubstraitType (0 ms)
[ RUN ] Substrait.SupportedLiterals
[ OK ] Substrait.SupportedLiterals (1 ms)
[ RUN ] Substrait.CannotDeserializeLiteral
[ OK ] Substrait.CannotDeserializeLiteral (0 ms)
[ RUN ] Substrait.FieldRefRoundTrip
[ OK ] Substrait.FieldRefRoundTrip (1 ms)
[ RUN ] Substrait.RecursiveFieldRef
[ OK ] Substrait.RecursiveFieldRef (0 ms)
[ RUN ] Substrait.FieldRefsInExpressions
[ OK ] Substrait.FieldRefsInExpressions (0 ms)
[ RUN ] Substrait.CallSpecialCaseRoundTrip
[ OK ] Substrait.CallSpecialCaseRoundTrip (0 ms)
[ RUN ] Substrait.CallExtensionFunction
[ OK ] Substrait.CallExtensionFunction (0 ms)
[ RUN ] Substrait.ReadRel
Thread 1 "arrow-substrait" received signal SIGSEGV, Segmentation fault.
0x00005555555b02e6 in testing::internal::MatcherBase<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&>::MatchAndExplain (listener=0x7fffffffb3a0, x=...,
this=<optimized out>) at /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/x86_64-conda-linux-gnu/include/c++/10.3.0/bits/shared_ptr_base.h:1324
1324 get() const noexcept
(gdb) bt
#0 0x00005555555b02e6 in testing::internal::MatcherBase<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&>::MatchAndExplain (listener=0x7fffffffb3a0, x=...,
this=<optimized out>) at /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/x86_64-conda-linux-gnu/include/c++/10.3.0/bits/shared_ptr_base.h:1324
#1 testing::internal::UnorderedElementsAreMatcherImpl<std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&>::AnalyzeElements<__gnu_cxx::__normal_iterator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const*, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > > > (listener=0x7fffffffb640,
element_printouts=0x7fffffffb3b0, elem_last=..., elem_first=..., this=0x555555765610) at /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/include/gmock/gmock-matchers.h:3504
#2 testing::internal::UnorderedElementsAreMatcherImpl<std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&>::MatchAndExplain (this=0x555555765610, container=..., listener=0x7fffffffb640)
at /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/include/gmock/gmock-matchers.h:3464
#3 0x00005555555af714 in testing::internal::MatcherBase<std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&>::MatchAndExplain (listener=0x7fffffffb640, x=..., this=0x7fffffffb620)
at /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/x86_64-conda-linux-gnu/include/c++/10.3.0/bits/shared_ptr_base.h:1324
#4 testing::internal::MatcherBase<std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&>::Matches (x=..., this=0x7fffffffb620) at /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/include/gtest/gtest-matchers.h:270
#5 testing::internal::PredicateFormatterFromMatcher<testing::internal::UnorderedElementsAreMatcher<std::tuple<char const*, char const*> > >::operator()<std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > > (this=this@entry=0x7fffffffbae0,
value_text=value_text@entry=0x5555555b79f1 "dataset.files()", x=...) at /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/include/gmock/gmock-matchers.h:1544
#6 0x0000555555598a2b in arrow::engine::Substrait_ReadRel_Test::TestBody (this=<optimized out>) at /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/include/gmock/gmock-matchers.h:3533
#7 0x00007ffff7c20d3e in void testing::internal::HandleExceptionsInMethodIfSupported<testing::Test, void>(testing::Test*, void (testing::Test::*)(), char const*) ()
from /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/lib/libgtest.so.1.11.0
#8 0x00007ffff7c21011 in testing::Test::Run() () from /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/lib/libgtest.so.1.11.0
#9 0x00007ffff7c213a7 in testing::TestInfo::Run() () from /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/lib/libgtest.so.1.11.0
#10 0x00007ffff7c21abc in testing::TestSuite::Run() () from /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/lib/libgtest.so.1.11.0
#11 0x00007ffff7c2228e in testing::internal::UnitTestImpl::RunAllTests() () from /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/lib/libgtest.so.1.11.0
#12 0x00007ffff7c216ae in testing::UnitTest::Run() () from /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/lib/libgtest.so.1.11.0
#13 0x00007ffff7c3f06f in main () from /mnt/soft1/tscontract/pkg/miniconda3/envs/pyarrow-dev/lib/libgtest_main.so.1.11.0
#14 0x00007ffff5b840b3 in __libc_start_main (main=0x7ffff7c3f030 <main>, argc=1, argv=0x7fffffffc0d8, init=<optimized out>, fini=<optimized out>, rtld_fini=<optimized out>, stack_end=0x7fffffffc0c8)
at ../csu/libc-start.c:308
#15 0x00005555555780f1 in _start () at /mnt/user1/tscontract/github/rtpsw/arrow/cpp/sr
{noformat}
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