You are viewing a plain text version of this content. The canonical link for it is here.
Posted to commits@uima.apache.org by re...@apache.org on 2013/01/11 00:12:37 UTC

svn commit: r1431721 [9/19] - in /uima/sandbox/uimafit/trunk: uimafit-examples/src/main/java/org/apache/uima/fit/examples/experiment/pos/ uimafit-examples/src/main/java/org/apache/uima/fit/examples/getstarted/ uimafit-examples/src/main/java/org/apache/...

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/FsIndexFactory.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/FsIndexFactory.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/FsIndexFactory.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/FsIndexFactory.java Thu Jan 10 23:12:33 2013
@@ -47,220 +47,210 @@ import org.apache.uima.util.XMLInputSour
 /**
  */
 public final class FsIndexFactory {
-	  public static final int STANDARD_COMPARE = FsIndexKeyDescription.STANDARD_COMPARE;
+  public static final int STANDARD_COMPARE = FsIndexKeyDescription.STANDARD_COMPARE;
 
-	  public static final int REVERSE_STANDARD_COMPARE = FsIndexKeyDescription.STANDARD_COMPARE;
+  public static final int REVERSE_STANDARD_COMPARE = FsIndexKeyDescription.STANDARD_COMPARE;
 
-	private FsIndexFactory() {
-		// Factory class
-	}  
-	  
-	/**
-	 * Create index configuration data for a given class definition using reflection and the
-	 * configuration parameter annotation.
-	 */
-	public static FsIndexCollection createFsIndexCollection(Class<?> componentClass) {
-		List<FsIndex> anFsIndexList = new ArrayList<FsIndex>();
-
-		// Check FsIndexCollection annotation
-		org.apache.uima.fit.descriptor.FsIndexCollection anIndexCollection =
-			getInheritableAnnotation(org.apache.uima.fit.descriptor.FsIndexCollection.class, componentClass);
-		if (anIndexCollection != null) {
-			anFsIndexList.addAll(asList(anIndexCollection.fsIndexes()));
-		}
-
-		// Check FsIndex annotation
-		org.apache.uima.fit.descriptor.FsIndex anFsIndex =
-			getInheritableAnnotation(FsIndex.class, componentClass);
-		if (anFsIndex != null) {
-			if (anIndexCollection != null) {
-				throw new IllegalStateException("Class ["+componentClass.getName()+"] must not " +
-						"declare "+org.apache.uima.fit.descriptor.FsIndexCollection.class.getSimpleName() +
-						" and "+FsIndex.class.getSimpleName()+" at the same time.");
-			}
-
-			anFsIndexList.add(anFsIndex);
-		}
-
-		FsIndexCollection_impl fsIndexCollection = new FsIndexCollection_impl();
-
-		// Process collected FsIndex annotations
-		for (FsIndex anIdx : anFsIndexList) {
-			// Collect index keys
-			List<FsIndexKeyDescription> keys = new ArrayList<FsIndexKeyDescription>();
-			for (FsIndexKey anIndexKey : anIdx.keys()) {
-				keys.add(createFsIndexKeyDescription(anIndexKey.featureName(),
-						anIndexKey.comparator()));
-			}
-
-			// type and typeName must not be set at the same time
-			if (!anIdx.typeName().equals(FsIndex.NO_NAME_TYPE_SET)
-					&& anIdx.type() != FsIndex.NoClassSet.class){
-				throw new IllegalStateException("Class ["+componentClass.getName()+"] must not " +
-						"declare an "+org.apache.uima.fit.descriptor.FsIndex.class.getSimpleName() +
-						" with type and typeName both set at the same time.");
-			}
-
-			String typeName;
-			if (!anIdx.typeName().equals(FsIndex.NO_NAME_TYPE_SET)) {
-				typeName = anIdx.typeName();
-			}
-			else if (anIdx.type() != FsIndex.NoClassSet.class) {
-				typeName = anIdx.type().getName();
-			}
-			else {
-				throw new IllegalStateException("Class ["+componentClass.getName()+"] must not " +
-						"declare an "+org.apache.uima.fit.descriptor.FsIndex.class.getSimpleName() +
-						" with neither type nor typeName set.");
-			}
-
-			fsIndexCollection.addFsIndex(createFsIndexDescription(anIdx.label(), anIdx.kind(),
-					typeName, anIdx.typePriorities(),
-					keys.toArray(new FsIndexKeyDescription[keys.size()])));
-		}
-
-		return fsIndexCollection;
-	}
-
-	public static FsIndexDescription createFsIndexDescription(String label, String kind,
-			String typeName, boolean useTypePriorities, FsIndexKeyDescription... keys)	{
-		FsIndexDescription_impl fsIndexDescription = new FsIndexDescription_impl();
-		fsIndexDescription.setLabel(label);
-		fsIndexDescription.setKind(kind);
-		fsIndexDescription.setTypeName(typeName);
-		fsIndexDescription.setKeys(keys);
-		return fsIndexDescription;
-	}
-
-	public static FsIndexCollection createFsIndexCollection(FsIndexDescription...descriptions) {
-		FsIndexCollection_impl fsIndexCollection = new FsIndexCollection_impl();
-		fsIndexCollection.setFsIndexes(descriptions);
-		return fsIndexCollection;
-	}
-
-	public static FsIndexKeyDescription createFsIndexKeyDescription(String featureName) {
-		return createFsIndexKeyDescription(featureName, STANDARD_COMPARE);
-	}
-
-	public static FsIndexKeyDescription createFsIndexKeyDescription(String featureName,
-			int comparator) {
-		FsIndexKeyDescription_impl key = new FsIndexKeyDescription_impl();
-		key.setFeatureName(featureName);
-		key.setComparator(comparator);
-		key.setTypePriority(false);
-		return key;
-	}
-
-	/**
-	 * System property indicating which locations to scan for index descriptions. A list of
-	 * locations may be given separated by ";".
-	 */
-	public static final String FS_INDEX_IMPORT_PATTERN = "org.uimafit.fsindex.import_pattern";
-
-	/**
-	 * Index manifest location.
-	 */
-	public static final String FS_INDEX_MANIFEST_PATTERN = "classpath*:META-INF/org.uimafit/fsindexes.txt";
-
-	private static String[] indexDescriptorLocations;
-
-	/**
-	 * Creates a {@link FsIndexCollection} from descriptor names.
-	 *
-	 * @param descriptorNames
-	 *            The fully qualified, Java-style, dotted descriptor names.
-	 * @return a {@link FsIndexCollection} that includes the indexes from all of the specified files.
-	 */
-	public static FsIndexCollection createFsIndexCollection(String... descriptorNames) {
-		List<Import> imports = new ArrayList<Import>();
-		for (String descriptorName : descriptorNames) {
-			Import imp = new Import_impl();
-			imp.setName(descriptorName);
-			imports.add(imp);
-		}
-		Import[] importArray = new Import[imports.size()];
-
-		FsIndexCollection fsIndexCollection = new FsIndexCollection_impl();
-		fsIndexCollection.setImports(imports.toArray(importArray));
-		return fsIndexCollection;
-	}
-
-	/**
-	 * Creates a {@link FsIndexCollection} from a descriptor file
-	 *
-	 * @param descriptorURIs
-	 *            The descriptor file paths.
-	 * @return A {@link FsIndexCollection} that includes the indexes from all of the specified files.
-	 */
-	public static FsIndexCollection createTypeSystemDescriptionFromPath(
-			String... descriptorURIs) {
-		List<Import> imports = new ArrayList<Import>();
-		for (String descriptorURI : descriptorURIs) {
-			Import imp = new Import_impl();
-			imp.setLocation(descriptorURI);
-			imports.add(imp);
-		}
-		Import[] importArray = new Import[imports.size()];
-
-		FsIndexCollection fsIndexCollection = new FsIndexCollection_impl();
-		fsIndexCollection.setImports(imports.toArray(importArray));
-		return fsIndexCollection;
-	}
-
-	/**
-	 * Creates a {@link FsIndexCollection} from all index descriptions that can be found via the
-	 * {@link #FS_INDEX_IMPORT_PATTERN} or via the {@code META-INF/org.uimafit/fsindexes.txt} files
-	 * in the classpath.
-	 *
-	 * @return the auto-scanned indexes.
-	 */
-	public static FsIndexCollection createFsIndexCollection()
-			throws ResourceInitializationException {
-		List<FsIndexDescription> fsIndexList = new ArrayList<FsIndexDescription>();
-		for (String location : scanIndexDescriptors()) {
-			try {
-				XMLInputSource xmlInput = new XMLInputSource(location);
-				FsIndexCollection fsIdxCol = getXMLParser().parseFsIndexCollection(xmlInput);
-				fsIdxCol.resolveImports();
-				fsIndexList.addAll(asList(fsIdxCol.getFsIndexes()));
-				LogFactory.getLog(FsIndexFactory.class).debug(
-						"Detected index at [" + location + "]");
-			}
-			catch (IOException e) {
-				throw new ResourceInitializationException(e);
-			}
-			catch (InvalidXMLException e) {
-				LogFactory.getLog(TypeSystemDescription.class).warn(
-						"[" + location + "] is not a index descriptor file. Ignoring.", e);
-			}
-		}
-
-		return createFsIndexCollection(fsIndexList.toArray(new FsIndexDescription[fsIndexList
-				.size()]));
-	}
-
-	/**
-	 * Get all currently accessible index descriptor locations. A scan is actually only
-	 * performed on the first call and the locations are cached. To force a re-scan use
-	 * {@link #forceIndexDescriptorsScan()}.
-	 *
-	 * @return an array of locations.
-	 * @throws ResourceInitializationException
-	 *             if the locations could not be resolved.
-	 */
-	public static String[] scanIndexDescriptors() throws ResourceInitializationException {
-		if (indexDescriptorLocations == null) {
-			indexDescriptorLocations = resolve(scanImportsAndManifests(FS_INDEX_MANIFEST_PATTERN,
-					FS_INDEX_IMPORT_PATTERN));
-		}
-		return indexDescriptorLocations;
-	}
-
-	/**
-	 * Force rescan of type descriptors. The next call to {@link #scanIndexDescriptors()} will rescan
-	 * all auto-import locations.
-	 */
-	public static void forceIndexDescriptorsScan() {
-		indexDescriptorLocations = null;
-	}
+  private FsIndexFactory() {
+    // Factory class
+  }
+
+  /**
+   * Create index configuration data for a given class definition using reflection and the
+   * configuration parameter annotation.
+   */
+  public static FsIndexCollection createFsIndexCollection(Class<?> componentClass) {
+    List<FsIndex> anFsIndexList = new ArrayList<FsIndex>();
+
+    // Check FsIndexCollection annotation
+    org.apache.uima.fit.descriptor.FsIndexCollection anIndexCollection = getInheritableAnnotation(
+            org.apache.uima.fit.descriptor.FsIndexCollection.class, componentClass);
+    if (anIndexCollection != null) {
+      anFsIndexList.addAll(asList(anIndexCollection.fsIndexes()));
+    }
+
+    // Check FsIndex annotation
+    org.apache.uima.fit.descriptor.FsIndex anFsIndex = getInheritableAnnotation(FsIndex.class,
+            componentClass);
+    if (anFsIndex != null) {
+      if (anIndexCollection != null) {
+        throw new IllegalStateException("Class [" + componentClass.getName() + "] must not "
+                + "declare "
+                + org.apache.uima.fit.descriptor.FsIndexCollection.class.getSimpleName() + " and "
+                + FsIndex.class.getSimpleName() + " at the same time.");
+      }
+
+      anFsIndexList.add(anFsIndex);
+    }
+
+    FsIndexCollection_impl fsIndexCollection = new FsIndexCollection_impl();
+
+    // Process collected FsIndex annotations
+    for (FsIndex anIdx : anFsIndexList) {
+      // Collect index keys
+      List<FsIndexKeyDescription> keys = new ArrayList<FsIndexKeyDescription>();
+      for (FsIndexKey anIndexKey : anIdx.keys()) {
+        keys.add(createFsIndexKeyDescription(anIndexKey.featureName(), anIndexKey.comparator()));
+      }
+
+      // type and typeName must not be set at the same time
+      if (!anIdx.typeName().equals(FsIndex.NO_NAME_TYPE_SET)
+              && anIdx.type() != FsIndex.NoClassSet.class) {
+        throw new IllegalStateException("Class [" + componentClass.getName() + "] must not "
+                + "declare an " + org.apache.uima.fit.descriptor.FsIndex.class.getSimpleName()
+                + " with type and typeName both set at the same time.");
+      }
+
+      String typeName;
+      if (!anIdx.typeName().equals(FsIndex.NO_NAME_TYPE_SET)) {
+        typeName = anIdx.typeName();
+      } else if (anIdx.type() != FsIndex.NoClassSet.class) {
+        typeName = anIdx.type().getName();
+      } else {
+        throw new IllegalStateException("Class [" + componentClass.getName() + "] must not "
+                + "declare an " + org.apache.uima.fit.descriptor.FsIndex.class.getSimpleName()
+                + " with neither type nor typeName set.");
+      }
+
+      fsIndexCollection.addFsIndex(createFsIndexDescription(anIdx.label(), anIdx.kind(), typeName,
+              anIdx.typePriorities(), keys.toArray(new FsIndexKeyDescription[keys.size()])));
+    }
+
+    return fsIndexCollection;
+  }
+
+  public static FsIndexDescription createFsIndexDescription(String label, String kind,
+          String typeName, boolean useTypePriorities, FsIndexKeyDescription... keys) {
+    FsIndexDescription_impl fsIndexDescription = new FsIndexDescription_impl();
+    fsIndexDescription.setLabel(label);
+    fsIndexDescription.setKind(kind);
+    fsIndexDescription.setTypeName(typeName);
+    fsIndexDescription.setKeys(keys);
+    return fsIndexDescription;
+  }
+
+  public static FsIndexCollection createFsIndexCollection(FsIndexDescription... descriptions) {
+    FsIndexCollection_impl fsIndexCollection = new FsIndexCollection_impl();
+    fsIndexCollection.setFsIndexes(descriptions);
+    return fsIndexCollection;
+  }
+
+  public static FsIndexKeyDescription createFsIndexKeyDescription(String featureName) {
+    return createFsIndexKeyDescription(featureName, STANDARD_COMPARE);
+  }
+
+  public static FsIndexKeyDescription createFsIndexKeyDescription(String featureName, int comparator) {
+    FsIndexKeyDescription_impl key = new FsIndexKeyDescription_impl();
+    key.setFeatureName(featureName);
+    key.setComparator(comparator);
+    key.setTypePriority(false);
+    return key;
+  }
+
+  /**
+   * System property indicating which locations to scan for index descriptions. A list of locations
+   * may be given separated by ";".
+   */
+  public static final String FS_INDEX_IMPORT_PATTERN = "org.uimafit.fsindex.import_pattern";
+
+  /**
+   * Index manifest location.
+   */
+  public static final String FS_INDEX_MANIFEST_PATTERN = "classpath*:META-INF/org.uimafit/fsindexes.txt";
+
+  private static String[] indexDescriptorLocations;
+
+  /**
+   * Creates a {@link FsIndexCollection} from descriptor names.
+   * 
+   * @param descriptorNames
+   *          The fully qualified, Java-style, dotted descriptor names.
+   * @return a {@link FsIndexCollection} that includes the indexes from all of the specified files.
+   */
+  public static FsIndexCollection createFsIndexCollection(String... descriptorNames) {
+    List<Import> imports = new ArrayList<Import>();
+    for (String descriptorName : descriptorNames) {
+      Import imp = new Import_impl();
+      imp.setName(descriptorName);
+      imports.add(imp);
+    }
+    Import[] importArray = new Import[imports.size()];
+
+    FsIndexCollection fsIndexCollection = new FsIndexCollection_impl();
+    fsIndexCollection.setImports(imports.toArray(importArray));
+    return fsIndexCollection;
+  }
+
+  /**
+   * Creates a {@link FsIndexCollection} from a descriptor file
+   * 
+   * @param descriptorURIs
+   *          The descriptor file paths.
+   * @return A {@link FsIndexCollection} that includes the indexes from all of the specified files.
+   */
+  public static FsIndexCollection createTypeSystemDescriptionFromPath(String... descriptorURIs) {
+    List<Import> imports = new ArrayList<Import>();
+    for (String descriptorURI : descriptorURIs) {
+      Import imp = new Import_impl();
+      imp.setLocation(descriptorURI);
+      imports.add(imp);
+    }
+    Import[] importArray = new Import[imports.size()];
+
+    FsIndexCollection fsIndexCollection = new FsIndexCollection_impl();
+    fsIndexCollection.setImports(imports.toArray(importArray));
+    return fsIndexCollection;
+  }
+
+  /**
+   * Creates a {@link FsIndexCollection} from all index descriptions that can be found via the
+   * {@link #FS_INDEX_IMPORT_PATTERN} or via the {@code META-INF/org.uimafit/fsindexes.txt} files in
+   * the classpath.
+   * 
+   * @return the auto-scanned indexes.
+   */
+  public static FsIndexCollection createFsIndexCollection() throws ResourceInitializationException {
+    List<FsIndexDescription> fsIndexList = new ArrayList<FsIndexDescription>();
+    for (String location : scanIndexDescriptors()) {
+      try {
+        XMLInputSource xmlInput = new XMLInputSource(location);
+        FsIndexCollection fsIdxCol = getXMLParser().parseFsIndexCollection(xmlInput);
+        fsIdxCol.resolveImports();
+        fsIndexList.addAll(asList(fsIdxCol.getFsIndexes()));
+        LogFactory.getLog(FsIndexFactory.class).debug("Detected index at [" + location + "]");
+      } catch (IOException e) {
+        throw new ResourceInitializationException(e);
+      } catch (InvalidXMLException e) {
+        LogFactory.getLog(TypeSystemDescription.class).warn(
+                "[" + location + "] is not a index descriptor file. Ignoring.", e);
+      }
+    }
+
+    return createFsIndexCollection(fsIndexList.toArray(new FsIndexDescription[fsIndexList.size()]));
+  }
+
+  /**
+   * Get all currently accessible index descriptor locations. A scan is actually only performed on
+   * the first call and the locations are cached. To force a re-scan use
+   * {@link #forceIndexDescriptorsScan()}.
+   * 
+   * @return an array of locations.
+   * @throws ResourceInitializationException
+   *           if the locations could not be resolved.
+   */
+  public static String[] scanIndexDescriptors() throws ResourceInitializationException {
+    if (indexDescriptorLocations == null) {
+      indexDescriptorLocations = resolve(scanImportsAndManifests(FS_INDEX_MANIFEST_PATTERN,
+              FS_INDEX_IMPORT_PATTERN));
+    }
+    return indexDescriptorLocations;
+  }
+
+  /**
+   * Force rescan of type descriptors. The next call to {@link #scanIndexDescriptors()} will rescan
+   * all auto-import locations.
+   */
+  public static void forceIndexDescriptorsScan() {
+    indexDescriptorLocations = null;
+  }
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/JCasBuilder.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/JCasBuilder.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/JCasBuilder.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/JCasBuilder.java Thu Jan 10 23:12:33 2013
@@ -29,97 +29,98 @@ import org.apache.uima.jcas.JCas;
  * 
  */
 public class JCasBuilder {
-	private final StringBuilder documentText = new StringBuilder();
-	private final JCas jcas;
+  private final StringBuilder documentText = new StringBuilder();
 
-	/**
-	 * Create a new JCas builder working on the specified JCas. The JCas must not have any content
-	 * yet.
-	 * 
-	 * @param aJCas
-	 *            the working JCas.
-	 */
-	public JCasBuilder(JCas aJCas) {
-		jcas = aJCas;
-	}
-
-	/**
-	 * Append a text.
-	 * 
-	 * @param aText
-	 *            the text to append.
-	 */
-	public void add(String aText) {
-		documentText.append(aText);
-	}
-
-	/**
-	 * Append a text annotated with the specified annotation. The created annotation is returned and
-	 * further properties can be set on it. The annotation is already added to the indexes.
-	 * 
-	 * @param aText
-	 *            covered text
-	 * @param aClass
-	 *            annotation type
-	 * @param <T>
-	 *            annotation type
-	 * @return annotation instance - can be used to set features or determine offsets
-	 */
-	@SuppressWarnings("unchecked")
-	public <T> T add(String aText, Class<T> aClass) {
-		Type type = getType(jcas, aClass);
-		int begin = documentText.length();
-		add(aText);
-		int end = documentText.length();
-		AnnotationFS fs = jcas.getCas().createAnnotation(type, begin, end);
-		jcas.addFsToIndexes(fs);
-		return (T) fs;
-	}
-
-	/**
-	 * Add an annotation starting at the specified position and ending at the current end of the
-	 * text. The created annotation is returned and further properties can be set on it. The
-	 * annotation is already added to the indexes.
-	 * 
-	 * @param <T>
-	 *            annotation type
-	 * @param aBegin
-	 *            begin offset.
-	 * @param aClass
-	 *            annotation type
-	 * @return annotation instance - can be used to set features or determine offsets
-	 */
-	@SuppressWarnings("unchecked")
-	public <T> T add(int aBegin, Class<T> aClass) {
-		Type type = getType(jcas, aClass);
-		int end = documentText.length();
-		AnnotationFS fs = jcas.getCas().createAnnotation(type, aBegin, end);
-		jcas.addFsToIndexes(fs);
-		return (T) fs;
-	}
-
-	/**
-	 * Get the current "cursor" position (current text length).
-	 * 
-	 * @return current text length.
-	 */
-	public int getPosition() {
-		return documentText.length();
-	}
-
-	/**
-	 * Get the JCas.
-	 * 
-	 * @return the JCas.
-	 */
-	public JCas getJCas() {
-		return jcas;
-	}
-
-	/**
-	 * Complete the building process by writing the text into the CAS. This can only be called once.
-	 */
-	public void close() {
-		jcas.setDocumentText(documentText.toString());
-	}
+  private final JCas jcas;
+
+  /**
+   * Create a new JCas builder working on the specified JCas. The JCas must not have any content
+   * yet.
+   * 
+   * @param aJCas
+   *          the working JCas.
+   */
+  public JCasBuilder(JCas aJCas) {
+    jcas = aJCas;
+  }
+
+  /**
+   * Append a text.
+   * 
+   * @param aText
+   *          the text to append.
+   */
+  public void add(String aText) {
+    documentText.append(aText);
+  }
+
+  /**
+   * Append a text annotated with the specified annotation. The created annotation is returned and
+   * further properties can be set on it. The annotation is already added to the indexes.
+   * 
+   * @param aText
+   *          covered text
+   * @param aClass
+   *          annotation type
+   * @param <T>
+   *          annotation type
+   * @return annotation instance - can be used to set features or determine offsets
+   */
+  @SuppressWarnings("unchecked")
+  public <T> T add(String aText, Class<T> aClass) {
+    Type type = getType(jcas, aClass);
+    int begin = documentText.length();
+    add(aText);
+    int end = documentText.length();
+    AnnotationFS fs = jcas.getCas().createAnnotation(type, begin, end);
+    jcas.addFsToIndexes(fs);
+    return (T) fs;
+  }
+
+  /**
+   * Add an annotation starting at the specified position and ending at the current end of the text.
+   * The created annotation is returned and further properties can be set on it. The annotation is
+   * already added to the indexes.
+   * 
+   * @param <T>
+   *          annotation type
+   * @param aBegin
+   *          begin offset.
+   * @param aClass
+   *          annotation type
+   * @return annotation instance - can be used to set features or determine offsets
+   */
+  @SuppressWarnings("unchecked")
+  public <T> T add(int aBegin, Class<T> aClass) {
+    Type type = getType(jcas, aClass);
+    int end = documentText.length();
+    AnnotationFS fs = jcas.getCas().createAnnotation(type, aBegin, end);
+    jcas.addFsToIndexes(fs);
+    return (T) fs;
+  }
+
+  /**
+   * Get the current "cursor" position (current text length).
+   * 
+   * @return current text length.
+   */
+  public int getPosition() {
+    return documentText.length();
+  }
+
+  /**
+   * Get the JCas.
+   * 
+   * @return the JCas.
+   */
+  public JCas getJCas() {
+    return jcas;
+  }
+
+  /**
+   * Complete the building process by writing the text into the CAS. This can only be called once.
+   */
+  public void close() {
+    jcas.setDocumentText(documentText.toString());
+  }
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/JCasFactory.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/JCasFactory.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/JCasFactory.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/JCasFactory.java Thu Jan 10 23:12:33 2013
@@ -38,147 +38,144 @@ import org.xml.sax.SAXException;
 /**
  */
 public final class JCasFactory {
-	private JCasFactory() {
-		// This class is not meant to be instantiated
-	}
-
-	/**
-	 * Creates a new JCas for the automatically derived type system. See
-	 * {@link TypeSystemDescriptionFactory#createTypeSystemDescription()}
-	 */
-	public static JCas createJCas() throws UIMAException {
-		return CasCreationUtils.createCas(createTypeSystemDescription(), null, null).getJCas();
-
-	}
-
-	/**
-	 * Creates a new JCas from type system descriptor files found by name
-	 */
-	public static JCas createJCas(String... typeSystemDescriptorNames) throws UIMAException {
-		return CasCreationUtils.createCas(createTypeSystemDescription(typeSystemDescriptorNames),
-				null, null).getJCas();
-	}
-
-	/**
-	 * Creates a new JCas from type system descriptor files.
-	 *
-	 * @param typeSystemDescriptorPaths
-	 *            paths to type system descriptor files
-	 */
-	public static JCas createJCasFromPath(String... typeSystemDescriptorPaths) throws UIMAException {
-		return createJCas(createTypeSystemDescriptionFromPath(typeSystemDescriptorPaths));
-	}
-
-	/**
-	 * Create a new JCas with a new type system defined by the classes provided
-	 * 
-	 * @param typeSystemClasses
-	 *            should be classes generated by JCasGen
-	 *            
-	 * @deprecated This is not the method you want to use. If you declare only one type per XML type
-	 *             descriptor, you'll end up with LOTS of these. Use
-	 *             {@link TypeSystemDescriptionFactory#createTypeSystemDescription(String...)} or
-	 *             automatic type system detection with
-	 *             {@link TypeSystemDescriptionFactory#createTypeSystemDescription()}.
-	 */
-	@Deprecated
-	public static JCas createJCas(Class<?>... typeSystemClasses) throws UIMAException {
-		return createJCas(createTypeSystemDescription(typeSystemClasses));
-	}
-
-	/**
-	 * Create a new JCas for the given type system description
-	 */
-	public static JCas createJCas(TypeSystemDescription typeSystemDescription) throws UIMAException {
-		return CasCreationUtils.createCas(typeSystemDescription, null, null).getJCas();
-	}
-
-	/**
-	 * This method creates a new JCas and loads the contents of an XMI file into it.
-	 *
-	 * @param xmiFileName
-	 *            a file name for an XMI file.
-	 */
-	public static JCas createJCas(String xmiFileName, TypeSystemDescription typeSystemDescription)
-			throws UIMAException, IOException {
-		return createJCas(xmiFileName, typeSystemDescription, true);
-	}
-
-	/**
-	 * This method creates a new JCas and loads the contents of an XMI or XCAS file into it.
-	 *
-	 * @param xmlFileName
-	 *            a file name for an XML file containing XMI or XCAS content.
-	 * @param isXmi
-	 *            if true, than assume XMI format. Otherwise, assume XCAS.
-	 */
-	public static JCas createJCas(String xmlFileName, TypeSystemDescription typeSystemDescription,
-			boolean isXmi) throws UIMAException, IOException {
-		JCas jCas = createJCas(typeSystemDescription);
-		loadJCas(jCas, xmlFileName, isXmi);
-		return jCas;
-	}
-
-	/**
-	 * This method passes through to {@link #loadJCas(JCas, String, boolean)}
-	 *
-	 * @param xmiFileName
-	 *            a file name for an XMI file
-	 */
-	public static void loadJCas(JCas jCas, String xmiFileName) throws IOException {
-		loadJCas(jCas, xmiFileName, true);
-	}
-
-	/**
-	 * This method takes a JCas, resets it, and loads it with the contents of an XMI or XCAS file
-	 *
-	 * @param xmlFileName
-	 *            a file name for an XML file containing XMI or XCAS content.
-	 * @param isXmi
-	 *            if true, than assume XMI format. Otherwise, assume XCAS.
-	 */
-	public static void loadJCas(JCas jCas, String xmlFileName, boolean isXmi) throws IOException {
-		FileInputStream inputStream = new FileInputStream(xmlFileName);
-		loadJCas(jCas, inputStream, isXmi);
-	}
-
-	/**
-	 * This method passes through to {@link #loadJCas(JCas, InputStream, boolean)}
-	 */
-	public static void loadJCas(JCas jCas, InputStream xmiInputStream) throws IOException {
-		loadJCas(jCas, xmiInputStream, true);
-	}
-
-	/**
-	 * This method takes a JCas, resets it, and loads it with the contents of an XMI or XCAS input
-	 * stream
-	 *
-	 * @param xmlInputStream
-	 *            should contain the contents of a serialized CAS in the form of XMI or XCAS XML
-	 * @param isXmi
-	 *            if true, than assume XMI format. Otherwise, assume XCAS.
-	 */
-	public static void loadJCas(JCas jCas, InputStream xmlInputStream, boolean isXmi)
-			throws IOException {
-		jCas.reset();
-		try {
-			CAS cas = jCas.getCas();
-			if (isXmi) {
-				XmiCasDeserializer.deserialize(xmlInputStream, cas);
-			}
-			else {
-				XCASDeserializer.deserialize(xmlInputStream, cas);
-			}
-		}
-		catch (SAXException e) {
-			IOException ioe = new IOException(e.getMessage());
-			ioe.initCause(e);
-			throw ioe; // NOPMD
-			// If we were using Java 1.6 and add the wrapped exception to the IOException
-			// constructor, we would not get a warning here
-		}
-		finally {
-			IOUtils.closeQuietly(xmlInputStream);
-		}
-	}
+  private JCasFactory() {
+    // This class is not meant to be instantiated
+  }
+
+  /**
+   * Creates a new JCas for the automatically derived type system. See
+   * {@link TypeSystemDescriptionFactory#createTypeSystemDescription()}
+   */
+  public static JCas createJCas() throws UIMAException {
+    return CasCreationUtils.createCas(createTypeSystemDescription(), null, null).getJCas();
+
+  }
+
+  /**
+   * Creates a new JCas from type system descriptor files found by name
+   */
+  public static JCas createJCas(String... typeSystemDescriptorNames) throws UIMAException {
+    return CasCreationUtils.createCas(createTypeSystemDescription(typeSystemDescriptorNames), null,
+            null).getJCas();
+  }
+
+  /**
+   * Creates a new JCas from type system descriptor files.
+   * 
+   * @param typeSystemDescriptorPaths
+   *          paths to type system descriptor files
+   */
+  public static JCas createJCasFromPath(String... typeSystemDescriptorPaths) throws UIMAException {
+    return createJCas(createTypeSystemDescriptionFromPath(typeSystemDescriptorPaths));
+  }
+
+  /**
+   * Create a new JCas with a new type system defined by the classes provided
+   * 
+   * @param typeSystemClasses
+   *          should be classes generated by JCasGen
+   * 
+   * @deprecated This is not the method you want to use. If you declare only one type per XML type
+   *             descriptor, you'll end up with LOTS of these. Use
+   *             {@link TypeSystemDescriptionFactory#createTypeSystemDescription(String...)} or
+   *             automatic type system detection with
+   *             {@link TypeSystemDescriptionFactory#createTypeSystemDescription()}.
+   */
+  @Deprecated
+  public static JCas createJCas(Class<?>... typeSystemClasses) throws UIMAException {
+    return createJCas(createTypeSystemDescription(typeSystemClasses));
+  }
+
+  /**
+   * Create a new JCas for the given type system description
+   */
+  public static JCas createJCas(TypeSystemDescription typeSystemDescription) throws UIMAException {
+    return CasCreationUtils.createCas(typeSystemDescription, null, null).getJCas();
+  }
+
+  /**
+   * This method creates a new JCas and loads the contents of an XMI file into it.
+   * 
+   * @param xmiFileName
+   *          a file name for an XMI file.
+   */
+  public static JCas createJCas(String xmiFileName, TypeSystemDescription typeSystemDescription)
+          throws UIMAException, IOException {
+    return createJCas(xmiFileName, typeSystemDescription, true);
+  }
+
+  /**
+   * This method creates a new JCas and loads the contents of an XMI or XCAS file into it.
+   * 
+   * @param xmlFileName
+   *          a file name for an XML file containing XMI or XCAS content.
+   * @param isXmi
+   *          if true, than assume XMI format. Otherwise, assume XCAS.
+   */
+  public static JCas createJCas(String xmlFileName, TypeSystemDescription typeSystemDescription,
+          boolean isXmi) throws UIMAException, IOException {
+    JCas jCas = createJCas(typeSystemDescription);
+    loadJCas(jCas, xmlFileName, isXmi);
+    return jCas;
+  }
+
+  /**
+   * This method passes through to {@link #loadJCas(JCas, String, boolean)}
+   * 
+   * @param xmiFileName
+   *          a file name for an XMI file
+   */
+  public static void loadJCas(JCas jCas, String xmiFileName) throws IOException {
+    loadJCas(jCas, xmiFileName, true);
+  }
+
+  /**
+   * This method takes a JCas, resets it, and loads it with the contents of an XMI or XCAS file
+   * 
+   * @param xmlFileName
+   *          a file name for an XML file containing XMI or XCAS content.
+   * @param isXmi
+   *          if true, than assume XMI format. Otherwise, assume XCAS.
+   */
+  public static void loadJCas(JCas jCas, String xmlFileName, boolean isXmi) throws IOException {
+    FileInputStream inputStream = new FileInputStream(xmlFileName);
+    loadJCas(jCas, inputStream, isXmi);
+  }
+
+  /**
+   * This method passes through to {@link #loadJCas(JCas, InputStream, boolean)}
+   */
+  public static void loadJCas(JCas jCas, InputStream xmiInputStream) throws IOException {
+    loadJCas(jCas, xmiInputStream, true);
+  }
+
+  /**
+   * This method takes a JCas, resets it, and loads it with the contents of an XMI or XCAS input
+   * stream
+   * 
+   * @param xmlInputStream
+   *          should contain the contents of a serialized CAS in the form of XMI or XCAS XML
+   * @param isXmi
+   *          if true, than assume XMI format. Otherwise, assume XCAS.
+   */
+  public static void loadJCas(JCas jCas, InputStream xmlInputStream, boolean isXmi)
+          throws IOException {
+    jCas.reset();
+    try {
+      CAS cas = jCas.getCas();
+      if (isXmi) {
+        XmiCasDeserializer.deserialize(xmlInputStream, cas);
+      } else {
+        XCASDeserializer.deserialize(xmlInputStream, cas);
+      }
+    } catch (SAXException e) {
+      IOException ioe = new IOException(e.getMessage());
+      ioe.initCause(e);
+      throw ioe; // NOPMD
+      // If we were using Java 1.6 and add the wrapped exception to the IOException
+      // constructor, we would not get a warning here
+    } finally {
+      IOUtils.closeQuietly(xmlInputStream);
+    }
+  }
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/ResourceCreationSpecifierFactory.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/ResourceCreationSpecifierFactory.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/ResourceCreationSpecifierFactory.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/ResourceCreationSpecifierFactory.java Thu Jan 10 23:12:33 2013
@@ -34,132 +34,130 @@ import org.apache.uima.util.XMLParser;
 /**
  */
 public final class ResourceCreationSpecifierFactory {
-	private ResourceCreationSpecifierFactory() {
-		// This class is not meant to be instantiated
-	}
-
-	/**
-	 * Parse a ResourceCreationSpecifier from the URL of an XML descriptor file, setting additional
-	 * configuration parameters as necessary.
-	 * 
-	 * @param descriptorURL
-	 *            The URL of the XML descriptor file.
-	 * @param parameters
-	 *            Any additional configuration parameters to be set. These should be supplied as
-	 *            (name, value) pairs, so there should always be an even number of parameters.
-	 * @return The ResourceCreationSpecifier for the XML descriptor with all the configuration
-	 *         parameters set.
-	 */
-	public static ResourceCreationSpecifier createResourceCreationSpecifier(URL descriptorURL,
-			Object[] parameters) throws UIMAException, IOException {
-		return createResourceCreationSpecifier(new XMLInputSource(descriptorURL), parameters);
-	}
-
-	/**
-	 * Parse a ResourceCreationSpecifier from XML descriptor file input, setting additional
-	 * configuration parameters as necessary.
-	 * 
-	 * @param xmlInput
-	 *            The descriptor file as an XMLInputSource.
-	 * @param parameters
-	 *            Any additional configuration parameters to be set. These should be supplied as
-	 *            (name, value) pairs, so there should always be an even number of parameters.
-	 * @return The ResourceCreationSpecifier for the XML descriptor with all the configuration
-	 *         parameters set.
-	 */
-	public static ResourceCreationSpecifier createResourceCreationSpecifier(
-			XMLInputSource xmlInput, Object[] parameters) throws UIMAException, IOException {
-		ConfigurationParameterFactory.ensureParametersComeInPairs(parameters);
-
-		ResourceCreationSpecifier specifier;
-		XMLParser parser = UIMAFramework.getXMLParser();
-		specifier = (ResourceCreationSpecifier) parser.parseResourceSpecifier(xmlInput);
-		setConfigurationParameters(specifier, parameters);
-
-		return specifier;
-	}
-
-	/**
-	 * Parse a ResourceCreationSpecifier from an XML descriptor file, setting additional
-	 * configuration parameters as necessary.
-	 * 
-	 * @param descriptorPath
-	 *            The path to the XML descriptor file.
-	 * @param parameters
-	 *            Any additional configuration parameters to be set. These should be supplied as
-	 *            (name, value) pairs, so there should always be an even number of parameters.
-	 * @return The ResourceCreationSpecifier for the XML descriptor with all the configuration
-	 *         parameters set.
-	 */
-	public static ResourceCreationSpecifier createResourceCreationSpecifier(String descriptorPath,
-			Object[] parameters) throws UIMAException, IOException {
-		return createResourceCreationSpecifier(new XMLInputSource(descriptorPath), parameters);
-	}
-
-	/**
-	 * Create configuration parameter declarations and settings from a list of (name, value) pairs.
-	 * 
-	 * @param specifier
-	 *            The ResourceCreationSpecifier whose parameters are to be set.
-	 * @param configurationData
-	 *            The configuration parameters to be set. These should be supplied as (name, value)
-	 *            pairs, so there should always be an even number of parameters.
-	 */
-	public static void setConfigurationParameters(ResourceCreationSpecifier specifier,
-			Object... configurationData) {
-		if (configurationData == null || configurationData.length == 0) {
-			return;
-		}
-		
-		ConfigurationParameterFactory.ensureParametersComeInPairs(configurationData);
-
-		ConfigurationParameter[] configurationParameters = new ConfigurationParameter[configurationData.length / 2];
-		Object[] configurationValues = new Object[configurationData.length / 2];
-
-		for (int i = 0; i < configurationValues.length; i++) {
-			String name = (String) configurationData[i * 2];
-			Object value = configurationData[i * 2 + 1];
-			ConfigurationParameter param = ConfigurationParameterFactory.createPrimitiveParameter(
-					name, value.getClass(), null, false);
-			configurationParameters[i] = param;
-			configurationValues[i] = ConfigurationParameterFactory.convertParameterValue(param, value);
-		}
-		setConfigurationParameters(specifier, configurationParameters, configurationValues);
-	}
-
-	/**
-	 * This method passes through to
-	 * {@link #setConfigurationParameters(ResourceMetaData, ConfigurationParameter[], Object[])}
-	 */
-	public static void setConfigurationParameters(ResourceCreationSpecifier specifier,
-			ConfigurationParameter[] configurationParameters, Object[] configurationValues) {
-		setConfigurationParameters(specifier.getMetaData(), configurationParameters,
-				configurationValues);
-	}
-
-	/**
-	 * This method sets the configuration parameters of a resource. The length of
-	 * configurationParameters and configurationValues should be equal
-	 * 
-	 * @param configurationParameters
-	 *            an array of configuration parameters
-	 * @param configurationValues
-	 *            an array of configuration parameter values
-	 */
-	public static void setConfigurationParameters(ResourceMetaData metaData,
-			ConfigurationParameter[] configurationParameters, Object[] configurationValues) {
-		ConfigurationParameterDeclarations paramDecls = metaData
-				.getConfigurationParameterDeclarations();
-		ConfigurationParameterSettings paramSettings = metaData.getConfigurationParameterSettings();
-		for (int i = 0; i < configurationParameters.length; i++) {
-			if (paramDecls != null
-					&& paramDecls.getConfigurationParameter(null,
-							configurationParameters[i].getName()) == null) {
-				paramDecls.addConfigurationParameter(configurationParameters[i]);
-			}
-			paramSettings.setParameterValue(configurationParameters[i].getName(),
-					configurationValues[i]);
-		}
-	}
+  private ResourceCreationSpecifierFactory() {
+    // This class is not meant to be instantiated
+  }
+
+  /**
+   * Parse a ResourceCreationSpecifier from the URL of an XML descriptor file, setting additional
+   * configuration parameters as necessary.
+   * 
+   * @param descriptorURL
+   *          The URL of the XML descriptor file.
+   * @param parameters
+   *          Any additional configuration parameters to be set. These should be supplied as (name,
+   *          value) pairs, so there should always be an even number of parameters.
+   * @return The ResourceCreationSpecifier for the XML descriptor with all the configuration
+   *         parameters set.
+   */
+  public static ResourceCreationSpecifier createResourceCreationSpecifier(URL descriptorURL,
+          Object[] parameters) throws UIMAException, IOException {
+    return createResourceCreationSpecifier(new XMLInputSource(descriptorURL), parameters);
+  }
+
+  /**
+   * Parse a ResourceCreationSpecifier from XML descriptor file input, setting additional
+   * configuration parameters as necessary.
+   * 
+   * @param xmlInput
+   *          The descriptor file as an XMLInputSource.
+   * @param parameters
+   *          Any additional configuration parameters to be set. These should be supplied as (name,
+   *          value) pairs, so there should always be an even number of parameters.
+   * @return The ResourceCreationSpecifier for the XML descriptor with all the configuration
+   *         parameters set.
+   */
+  public static ResourceCreationSpecifier createResourceCreationSpecifier(XMLInputSource xmlInput,
+          Object[] parameters) throws UIMAException, IOException {
+    ConfigurationParameterFactory.ensureParametersComeInPairs(parameters);
+
+    ResourceCreationSpecifier specifier;
+    XMLParser parser = UIMAFramework.getXMLParser();
+    specifier = (ResourceCreationSpecifier) parser.parseResourceSpecifier(xmlInput);
+    setConfigurationParameters(specifier, parameters);
+
+    return specifier;
+  }
+
+  /**
+   * Parse a ResourceCreationSpecifier from an XML descriptor file, setting additional configuration
+   * parameters as necessary.
+   * 
+   * @param descriptorPath
+   *          The path to the XML descriptor file.
+   * @param parameters
+   *          Any additional configuration parameters to be set. These should be supplied as (name,
+   *          value) pairs, so there should always be an even number of parameters.
+   * @return The ResourceCreationSpecifier for the XML descriptor with all the configuration
+   *         parameters set.
+   */
+  public static ResourceCreationSpecifier createResourceCreationSpecifier(String descriptorPath,
+          Object[] parameters) throws UIMAException, IOException {
+    return createResourceCreationSpecifier(new XMLInputSource(descriptorPath), parameters);
+  }
+
+  /**
+   * Create configuration parameter declarations and settings from a list of (name, value) pairs.
+   * 
+   * @param specifier
+   *          The ResourceCreationSpecifier whose parameters are to be set.
+   * @param configurationData
+   *          The configuration parameters to be set. These should be supplied as (name, value)
+   *          pairs, so there should always be an even number of parameters.
+   */
+  public static void setConfigurationParameters(ResourceCreationSpecifier specifier,
+          Object... configurationData) {
+    if (configurationData == null || configurationData.length == 0) {
+      return;
+    }
+
+    ConfigurationParameterFactory.ensureParametersComeInPairs(configurationData);
+
+    ConfigurationParameter[] configurationParameters = new ConfigurationParameter[configurationData.length / 2];
+    Object[] configurationValues = new Object[configurationData.length / 2];
+
+    for (int i = 0; i < configurationValues.length; i++) {
+      String name = (String) configurationData[i * 2];
+      Object value = configurationData[i * 2 + 1];
+      ConfigurationParameter param = ConfigurationParameterFactory.createPrimitiveParameter(name,
+              value.getClass(), null, false);
+      configurationParameters[i] = param;
+      configurationValues[i] = ConfigurationParameterFactory.convertParameterValue(param, value);
+    }
+    setConfigurationParameters(specifier, configurationParameters, configurationValues);
+  }
+
+  /**
+   * This method passes through to
+   * {@link #setConfigurationParameters(ResourceMetaData, ConfigurationParameter[], Object[])}
+   */
+  public static void setConfigurationParameters(ResourceCreationSpecifier specifier,
+          ConfigurationParameter[] configurationParameters, Object[] configurationValues) {
+    setConfigurationParameters(specifier.getMetaData(), configurationParameters,
+            configurationValues);
+  }
+
+  /**
+   * This method sets the configuration parameters of a resource. The length of
+   * configurationParameters and configurationValues should be equal
+   * 
+   * @param configurationParameters
+   *          an array of configuration parameters
+   * @param configurationValues
+   *          an array of configuration parameter values
+   */
+  public static void setConfigurationParameters(ResourceMetaData metaData,
+          ConfigurationParameter[] configurationParameters, Object[] configurationValues) {
+    ConfigurationParameterDeclarations paramDecls = metaData
+            .getConfigurationParameterDeclarations();
+    ConfigurationParameterSettings paramSettings = metaData.getConfigurationParameterSettings();
+    for (int i = 0; i < configurationParameters.length; i++) {
+      if (paramDecls != null
+              && paramDecls.getConfigurationParameter(null, configurationParameters[i].getName()) == null) {
+        paramDecls.addConfigurationParameter(configurationParameters[i]);
+      }
+      paramSettings.setParameterValue(configurationParameters[i].getName(), configurationValues[i]);
+    }
+  }
 
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/SofaMappingFactory.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/SofaMappingFactory.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/SofaMappingFactory.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/SofaMappingFactory.java Thu Jan 10 23:12:33 2013
@@ -25,45 +25,45 @@ import org.apache.uima.analysis_engine.m
 /**
  */
 public final class SofaMappingFactory {
-	private SofaMappingFactory() {
-		// This class is not meant to be instantiated
-	}
+  private SofaMappingFactory() {
+    // This class is not meant to be instantiated
+  }
 
-	/**
-	 * This method creates a sofa mapping which is useful for mapping view names in individual
-	 * components used in aggregate analysis engines to the view names used by the aggregate.
-	 * 
-	 * WARNING: in version 0.9.12 the ordering of the parameters was changed! The order used to be
-	 * aggregateSofaName, componentKey, componentSofaName. This was changed because it seemed an
-	 * unnatural ordering.
-	 * 
-	 * @param componentKey
-	 *            the key/name used by the aggregate analysis engine for the component whose view is
-	 *            being mapped.
-	 * @param componentSofaName
-	 *            the sofa name used by the the component
-	 * @param aggregateSofaName
-	 *            the view name that the component name is mapped to and used by the aggregate
-	 *            analysis engine
-	 * @return a sofa mapping with the componentSofaName mapped to the aggregateSofaName
-	 */
-	public static SofaMapping createSofaMapping(String componentKey, String componentSofaName,
-			String aggregateSofaName) {
+  /**
+   * This method creates a sofa mapping which is useful for mapping view names in individual
+   * components used in aggregate analysis engines to the view names used by the aggregate.
+   * 
+   * WARNING: in version 0.9.12 the ordering of the parameters was changed! The order used to be
+   * aggregateSofaName, componentKey, componentSofaName. This was changed because it seemed an
+   * unnatural ordering.
+   * 
+   * @param componentKey
+   *          the key/name used by the aggregate analysis engine for the component whose view is
+   *          being mapped.
+   * @param componentSofaName
+   *          the sofa name used by the the component
+   * @param aggregateSofaName
+   *          the view name that the component name is mapped to and used by the aggregate analysis
+   *          engine
+   * @return a sofa mapping with the componentSofaName mapped to the aggregateSofaName
+   */
+  public static SofaMapping createSofaMapping(String componentKey, String componentSofaName,
+          String aggregateSofaName) {
 
-		SofaMapping sofaMapping = new SofaMapping_impl();
-		sofaMapping.setComponentKey(componentKey);
-		sofaMapping.setComponentSofaName(componentSofaName);
-		sofaMapping.setAggregateSofaName(aggregateSofaName);
-		return sofaMapping;
-	}
+    SofaMapping sofaMapping = new SofaMapping_impl();
+    sofaMapping.setComponentKey(componentKey);
+    sofaMapping.setComponentSofaName(componentSofaName);
+    sofaMapping.setAggregateSofaName(aggregateSofaName);
+    return sofaMapping;
+  }
 
-	/**
-	 * create a sofa mapping using the component class rather than the component name
-	 */
-	public static SofaMapping createSofaMapping(Class<? extends AnalysisComponent> componentClass,
-			String componentSofaName, String aggregateSofaName) {
+  /**
+   * create a sofa mapping using the component class rather than the component name
+   */
+  public static SofaMapping createSofaMapping(Class<? extends AnalysisComponent> componentClass,
+          String componentSofaName, String aggregateSofaName) {
 
-		return createSofaMapping(componentClass.getName(), componentSofaName, aggregateSofaName);
-	}
+    return createSofaMapping(componentClass.getName(), componentSofaName, aggregateSofaName);
+  }
 
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/TypePrioritiesFactory.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/TypePrioritiesFactory.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/TypePrioritiesFactory.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/TypePrioritiesFactory.java Thu Jan 10 23:12:33 2013
@@ -18,51 +18,51 @@
  */
 package org.apache.uima.fit.factory;
 
+import static org.apache.uima.fit.util.CasUtil.UIMA_BUILTIN_JCAS_PREFIX;
+
 import org.apache.uima.resource.metadata.TypePriorities;
 import org.apache.uima.resource.metadata.TypePriorityList;
 import org.apache.uima.resource.metadata.impl.TypePriorities_impl;
 
-import static org.apache.uima.fit.util.CasUtil.UIMA_BUILTIN_JCAS_PREFIX;
-
 /**
  */
 
 public final class TypePrioritiesFactory {
-	private TypePrioritiesFactory() {
-		// This class is not meant to be instantiated
-	}
-
-	/**
-	 * Create a TypePriorities given a sequence of ordered type classes
-	 *
-	 * @param prioritizedTypes
-	 *            a sequence of ordered type classes
-	 */
-	public static TypePriorities createTypePriorities(Class<?>... prioritizedTypes) {
-		String[] typeNames = new String[prioritizedTypes.length];
-		for (int i = 0; i < prioritizedTypes.length; i++) {
-			String typeName = prioritizedTypes[i].getName();
-			if (typeName.startsWith(UIMA_BUILTIN_JCAS_PREFIX)) {
-				typeName = "uima." + typeName.substring(UIMA_BUILTIN_JCAS_PREFIX.length());
-			}
-
-			typeNames[i] = typeName;
-		}
-		return createTypePriorities(typeNames);
-	}
-
-	/**
-	 * Create a TypePriorities given a sequence of ordered type names
-	 *
-	 * @param prioritizedTypeNames
-	 *            a sequence of ordered type names
-	 */
-	public static TypePriorities createTypePriorities(String... prioritizedTypeNames) {
-		TypePriorities typePriorities = new TypePriorities_impl();
-		TypePriorityList typePriorityList = typePriorities.addPriorityList();
-		for (String typeName : prioritizedTypeNames) {
-			typePriorityList.addType(typeName);
-		}
-		return typePriorities;
-	}
+  private TypePrioritiesFactory() {
+    // This class is not meant to be instantiated
+  }
+
+  /**
+   * Create a TypePriorities given a sequence of ordered type classes
+   * 
+   * @param prioritizedTypes
+   *          a sequence of ordered type classes
+   */
+  public static TypePriorities createTypePriorities(Class<?>... prioritizedTypes) {
+    String[] typeNames = new String[prioritizedTypes.length];
+    for (int i = 0; i < prioritizedTypes.length; i++) {
+      String typeName = prioritizedTypes[i].getName();
+      if (typeName.startsWith(UIMA_BUILTIN_JCAS_PREFIX)) {
+        typeName = "uima." + typeName.substring(UIMA_BUILTIN_JCAS_PREFIX.length());
+      }
+
+      typeNames[i] = typeName;
+    }
+    return createTypePriorities(typeNames);
+  }
+
+  /**
+   * Create a TypePriorities given a sequence of ordered type names
+   * 
+   * @param prioritizedTypeNames
+   *          a sequence of ordered type names
+   */
+  public static TypePriorities createTypePriorities(String... prioritizedTypeNames) {
+    TypePriorities typePriorities = new TypePriorities_impl();
+    TypePriorityList typePriorityList = typePriorities.addPriorityList();
+    for (String typeName : prioritizedTypeNames) {
+      typePriorityList.addType(typeName);
+    }
+    return typePriorities;
+  }
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/TypeSystemDescriptionFactory.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/TypeSystemDescriptionFactory.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/TypeSystemDescriptionFactory.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/TypeSystemDescriptionFactory.java Thu Jan 10 23:12:33 2013
@@ -20,6 +20,7 @@ package org.apache.uima.fit.factory;
 
 import static org.apache.uima.UIMAFramework.getXMLParser;
 import static org.apache.uima.util.CasCreationUtils.mergeTypeSystems;
+
 import java.io.IOException;
 import java.io.InputStream;
 import java.net.URL;
@@ -45,207 +46,202 @@ import org.springframework.core.io.suppo
 /**
  */
 public final class TypeSystemDescriptionFactory {
-	private TypeSystemDescriptionFactory() {
-		// This class is not meant to be instantiated
-	}
-
-	/**
-	 * System property indicating which locations to scan for type descriptions. A list of locations
-	 * may be given separated by ";".
-	 */
-	public static final String TYPE_IMPORT_PATTERN = "org.apache.uima.fit.type.import_pattern";
-
-	/**
-	 * Type manifest location.
-	 */
-	public static final String TYPE_MANIFEST_PATTERN = "classpath*:META-INF/org.uimafit/types.txt";
-
-	private static String[] typeDescriptorLocations;
-
-	/**
-	 * Creates a TypeSystemDescription from a list of classes belonging to a type system - i.e.
-	 * classes generated by JCasGen. It is expected that for each of the classes passed to this
-	 * method, an XML type description exists with the same name as the class and in the same
-	 * package. It is further expected, that each of these type system descriptors declares
-	 * a single type, for which a JCas wrapper class has been generated, which has been passed to
-	 * this method.
-	 *
-	 * @param typeSystemClasses
-	 *            The type system class objects. Should be classes generated by JCasGen.
-	 * @return A TypeSystemDescription that includes all of the specified Annotation types.
-	 * @deprecated This is not the method you want to use. If you declare only one type per
-	 * XML type descriptor, you'll end up with LOTS of these. Use {@link 
-	 * #createTypeSystemDescription(String...)} or automatic type system detection with 
-	 * {@link #createTypeSystemDescription()}.
-	 */
-	@Deprecated
-	public static TypeSystemDescription createTypeSystemDescription(Class<?>... typeSystemClasses) {
-		TypeSystemDescription typeSystem = new TypeSystemDescription_impl();
-		List<Import> imports = new ArrayList<Import>();
-		for (Class<?> typeSystemClass : typeSystemClasses) {
-			Import imprt = new Import_impl();
-			imprt.setName(typeSystemClass.getName());
-			imports.add(imprt);
-		}
-		Import[] importArray = new Import[imports.size()];
-		typeSystem.setImports(imports.toArray(importArray));
-		return typeSystem;
-	}
-
-	/**
-	 * Creates a TypeSystemDescription from descriptor names.
-	 *
-	 * @param descriptorNames
-	 *            The fully qualified, Java-style, dotted descriptor names.
-	 * @return A TypeSystemDescription that includes the types from all of the specified files.
-	 */
-	public static TypeSystemDescription createTypeSystemDescription(String... descriptorNames) {
-		TypeSystemDescription typeSystem = new TypeSystemDescription_impl();
-		List<Import> imports = new ArrayList<Import>();
-		for (String descriptorName : descriptorNames) {
-			Import imp = new Import_impl();
-			imp.setName(descriptorName);
-			imports.add(imp);
-		}
-		Import[] importArray = new Import[imports.size()];
-		typeSystem.setImports(imports.toArray(importArray));
-		return typeSystem;
-	}
-
-	/**
-	 * Creates a TypeSystemDescription from a descriptor file
-	 *
-	 * @param descriptorURIs
-	 *            The descriptor file paths.
-	 * @return A TypeSystemDescription that includes the types from all of the specified files.
-	 */
-	public static TypeSystemDescription createTypeSystemDescriptionFromPath(
-			String... descriptorURIs) {
-		TypeSystemDescription typeSystem = new TypeSystemDescription_impl();
-		List<Import> imports = new ArrayList<Import>();
-		for (String descriptorURI : descriptorURIs) {
-			Import imp = new Import_impl();
-			imp.setLocation(descriptorURI);
-			imports.add(imp);
-		}
-		Import[] importArray = new Import[imports.size()];
-		typeSystem.setImports(imports.toArray(importArray));
-		return typeSystem;
-	}
-
-	/**
-	 * Creates a {@link TypeSystemDescription} from all type descriptions that can be found via the
-	 * {@link #TYPE_IMPORT_PATTERN} or via the {@code META-INF/org.uimafit/types.txt} files in the
-	 * classpath.
-	 *
-	 * @return the auto-scanned type system.
-	 */
-	public static TypeSystemDescription createTypeSystemDescription()
-			throws ResourceInitializationException {
-		List<TypeSystemDescription> tsdList = new ArrayList<TypeSystemDescription>();
-		for (String location : scanTypeDescriptors()) {
-			try {
-				XMLInputSource xmlInputType1 = new XMLInputSource(location);
-				tsdList.add(getXMLParser().parseTypeSystemDescription(xmlInputType1));
-				LogFactory.getLog(TypeSystemDescription.class).debug(
-						"Detected type system at [" + location + "]");
-			}
-			catch (IOException e) {
-				throw new ResourceInitializationException(e);
-			}
-			catch (InvalidXMLException e) {
-				LogFactory.getLog(TypeSystemDescription.class).warn(
-						"[" + location + "] is not a type file. Ignoring.", e);
-			}
-		}
-
-		return mergeTypeSystems(tsdList);
-	}
-
-	/**
-	 * Get all currently accessible type system descriptor locations. A scan is actually only
-	 * performed on the first call and the locations are cached. To force a re-scan use
-	 * {@link #forceTypeDescriptorsScan()}.
-	 *
-	 * @return an array of locations.
-	 * @throws ResourceInitializationException
-	 *             if the locations could not be resolved.
-	 */
-	public static String[] scanTypeDescriptors() throws ResourceInitializationException {
-		if (typeDescriptorLocations == null) {
-			typeDescriptorLocations = resolve(scanImportsAndManifests(TYPE_MANIFEST_PATTERN,
-					TYPE_IMPORT_PATTERN));
-		}
-		return typeDescriptorLocations;
-	}
-
-	/**
-	 * Force rescan of type descriptors. The next call to {@link #scanTypeDescriptors()} will rescan
-	 * all auto-import locations.
-	 */
-	public static void forceTypeDescriptorsScan() {
-		typeDescriptorLocations = null;
-	}
-
-	/**
-	 * Scan patterns from manifest files and from the specified system property.
-	 *
-	 * @param manifestPatterns pattern matching the manifest files.
-	 * @param importProperty system property containing additional patterns.
-	 * @return array or all patterns found.
-	 */
-	public static String[] scanImportsAndManifests(String manifestPatterns, String importProperty)
-			throws ResourceInitializationException {
-		ArrayList<String> patterns = new ArrayList<String>();
-
-		// Scan auto-import locations
-		patterns.addAll(Arrays.asList(System.getProperty(importProperty, "").split(";")));
-
-		// Scan manifest
-		for (String mfUrl : resolve(manifestPatterns)) {
-			InputStream is = null;
-			try {
-				is = new URL(mfUrl).openStream();
-				@SuppressWarnings("unchecked")
-				List<? extends String> lines = IOUtils.readLines(is);
-				patterns.addAll(lines);
-			}
-			catch (IOException e) {
-				throw new ResourceInitializationException(e);
-			}
-			finally {
-				IOUtils.closeQuietly(is);
-			}
-		}
-
-		return patterns.toArray(new String[patterns.size()]);
-	}
-
-	/**
-	 * Resolve a list of patterns to a set of URLs.
-	 *
-	 * @return an array of locations.
-	 * @throws ResourceInitializationException
-	 *             if the locations could not be resolved.
-	 */
-	public static String[] resolve(String... patterns) throws ResourceInitializationException {
-		Set<String> locations = new HashSet<String>();
-		PathMatchingResourcePatternResolver resolver = new PathMatchingResourcePatternResolver();
-		try {
-			// Scan auto-import locations. Using a set to avoid scanning a pattern twice.
-			for (String pattern : new TreeSet<String>(Arrays.asList(patterns))) {
-				String p = pattern.trim();
-				if (p.length() == 0) {
-					continue;
-				}
-				for (Resource r : resolver.getResources(pattern)) {
-					locations.add(r.getURL().toString());
-				}
-			}
-			return locations.toArray(new String[locations.size()]);
-		}
-		catch (IOException e) {
-			throw new ResourceInitializationException(e);
-		}
-	}
+  private TypeSystemDescriptionFactory() {
+    // This class is not meant to be instantiated
+  }
+
+  /**
+   * System property indicating which locations to scan for type descriptions. A list of locations
+   * may be given separated by ";".
+   */
+  public static final String TYPE_IMPORT_PATTERN = "org.apache.uima.fit.type.import_pattern";
+
+  /**
+   * Type manifest location.
+   */
+  public static final String TYPE_MANIFEST_PATTERN = "classpath*:META-INF/org.uimafit/types.txt";
+
+  private static String[] typeDescriptorLocations;
+
+  /**
+   * Creates a TypeSystemDescription from a list of classes belonging to a type system - i.e.
+   * classes generated by JCasGen. It is expected that for each of the classes passed to this
+   * method, an XML type description exists with the same name as the class and in the same package.
+   * It is further expected, that each of these type system descriptors declares a single type, for
+   * which a JCas wrapper class has been generated, which has been passed to this method.
+   * 
+   * @param typeSystemClasses
+   *          The type system class objects. Should be classes generated by JCasGen.
+   * @return A TypeSystemDescription that includes all of the specified Annotation types.
+   * @deprecated This is not the method you want to use. If you declare only one type per XML type
+   *             descriptor, you'll end up with LOTS of these. Use
+   *             {@link #createTypeSystemDescription(String...)} or automatic type system detection
+   *             with {@link #createTypeSystemDescription()}.
+   */
+  @Deprecated
+  public static TypeSystemDescription createTypeSystemDescription(Class<?>... typeSystemClasses) {
+    TypeSystemDescription typeSystem = new TypeSystemDescription_impl();
+    List<Import> imports = new ArrayList<Import>();
+    for (Class<?> typeSystemClass : typeSystemClasses) {
+      Import imprt = new Import_impl();
+      imprt.setName(typeSystemClass.getName());
+      imports.add(imprt);
+    }
+    Import[] importArray = new Import[imports.size()];
+    typeSystem.setImports(imports.toArray(importArray));
+    return typeSystem;
+  }
+
+  /**
+   * Creates a TypeSystemDescription from descriptor names.
+   * 
+   * @param descriptorNames
+   *          The fully qualified, Java-style, dotted descriptor names.
+   * @return A TypeSystemDescription that includes the types from all of the specified files.
+   */
+  public static TypeSystemDescription createTypeSystemDescription(String... descriptorNames) {
+    TypeSystemDescription typeSystem = new TypeSystemDescription_impl();
+    List<Import> imports = new ArrayList<Import>();
+    for (String descriptorName : descriptorNames) {
+      Import imp = new Import_impl();
+      imp.setName(descriptorName);
+      imports.add(imp);
+    }
+    Import[] importArray = new Import[imports.size()];
+    typeSystem.setImports(imports.toArray(importArray));
+    return typeSystem;
+  }
+
+  /**
+   * Creates a TypeSystemDescription from a descriptor file
+   * 
+   * @param descriptorURIs
+   *          The descriptor file paths.
+   * @return A TypeSystemDescription that includes the types from all of the specified files.
+   */
+  public static TypeSystemDescription createTypeSystemDescriptionFromPath(String... descriptorURIs) {
+    TypeSystemDescription typeSystem = new TypeSystemDescription_impl();
+    List<Import> imports = new ArrayList<Import>();
+    for (String descriptorURI : descriptorURIs) {
+      Import imp = new Import_impl();
+      imp.setLocation(descriptorURI);
+      imports.add(imp);
+    }
+    Import[] importArray = new Import[imports.size()];
+    typeSystem.setImports(imports.toArray(importArray));
+    return typeSystem;
+  }
+
+  /**
+   * Creates a {@link TypeSystemDescription} from all type descriptions that can be found via the
+   * {@link #TYPE_IMPORT_PATTERN} or via the {@code META-INF/org.uimafit/types.txt} files in the
+   * classpath.
+   * 
+   * @return the auto-scanned type system.
+   */
+  public static TypeSystemDescription createTypeSystemDescription()
+          throws ResourceInitializationException {
+    List<TypeSystemDescription> tsdList = new ArrayList<TypeSystemDescription>();
+    for (String location : scanTypeDescriptors()) {
+      try {
+        XMLInputSource xmlInputType1 = new XMLInputSource(location);
+        tsdList.add(getXMLParser().parseTypeSystemDescription(xmlInputType1));
+        LogFactory.getLog(TypeSystemDescription.class).debug(
+                "Detected type system at [" + location + "]");
+      } catch (IOException e) {
+        throw new ResourceInitializationException(e);
+      } catch (InvalidXMLException e) {
+        LogFactory.getLog(TypeSystemDescription.class).warn(
+                "[" + location + "] is not a type file. Ignoring.", e);
+      }
+    }
+
+    return mergeTypeSystems(tsdList);
+  }
+
+  /**
+   * Get all currently accessible type system descriptor locations. A scan is actually only
+   * performed on the first call and the locations are cached. To force a re-scan use
+   * {@link #forceTypeDescriptorsScan()}.
+   * 
+   * @return an array of locations.
+   * @throws ResourceInitializationException
+   *           if the locations could not be resolved.
+   */
+  public static String[] scanTypeDescriptors() throws ResourceInitializationException {
+    if (typeDescriptorLocations == null) {
+      typeDescriptorLocations = resolve(scanImportsAndManifests(TYPE_MANIFEST_PATTERN,
+              TYPE_IMPORT_PATTERN));
+    }
+    return typeDescriptorLocations;
+  }
+
+  /**
+   * Force rescan of type descriptors. The next call to {@link #scanTypeDescriptors()} will rescan
+   * all auto-import locations.
+   */
+  public static void forceTypeDescriptorsScan() {
+    typeDescriptorLocations = null;
+  }
+
+  /**
+   * Scan patterns from manifest files and from the specified system property.
+   * 
+   * @param manifestPatterns
+   *          pattern matching the manifest files.
+   * @param importProperty
+   *          system property containing additional patterns.
+   * @return array or all patterns found.
+   */
+  public static String[] scanImportsAndManifests(String manifestPatterns, String importProperty)
+          throws ResourceInitializationException {
+    ArrayList<String> patterns = new ArrayList<String>();
+
+    // Scan auto-import locations
+    patterns.addAll(Arrays.asList(System.getProperty(importProperty, "").split(";")));
+
+    // Scan manifest
+    for (String mfUrl : resolve(manifestPatterns)) {
+      InputStream is = null;
+      try {
+        is = new URL(mfUrl).openStream();
+        @SuppressWarnings("unchecked")
+        List<? extends String> lines = IOUtils.readLines(is);
+        patterns.addAll(lines);
+      } catch (IOException e) {
+        throw new ResourceInitializationException(e);
+      } finally {
+        IOUtils.closeQuietly(is);
+      }
+    }
+
+    return patterns.toArray(new String[patterns.size()]);
+  }
+
+  /**
+   * Resolve a list of patterns to a set of URLs.
+   * 
+   * @return an array of locations.
+   * @throws ResourceInitializationException
+   *           if the locations could not be resolved.
+   */
+  public static String[] resolve(String... patterns) throws ResourceInitializationException {
+    Set<String> locations = new HashSet<String>();
+    PathMatchingResourcePatternResolver resolver = new PathMatchingResourcePatternResolver();
+    try {
+      // Scan auto-import locations. Using a set to avoid scanning a pattern twice.
+      for (String pattern : new TreeSet<String>(Arrays.asList(patterns))) {
+        String p = pattern.trim();
+        if (p.length() == 0) {
+          continue;
+        }
+        for (Resource r : resolver.getResources(pattern)) {
+          locations.add(r.getURL().toString());
+        }
+      }
+      return locations.toArray(new String[locations.size()]);
+    } catch (IOException e) {
+      throw new ResourceInitializationException(e);
+    }
+  }
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/UimaContextFactory.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/UimaContextFactory.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/UimaContextFactory.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/UimaContextFactory.java Thu Jan 10 23:12:33 2013
@@ -26,24 +26,24 @@ import org.apache.uima.resource.Resource
 /**
  */
 public final class UimaContextFactory {
-	private UimaContextFactory() {
-		// This class is not meant to be instantiated
-	}
+  private UimaContextFactory() {
+    // This class is not meant to be instantiated
+  }
 
-	/**
-	 * Create a new UimaContext with the given configuration parameters set.
-	 * 
-	 * @param configurationParameters
-	 *            The parameters to be set.
-	 * @return The new UimaContext.
-	 * @throws ResourceInitializationException
-	 *             If the context could not be created.
-	 */
-	public static UimaContext createUimaContext(Object... configurationParameters)
-			throws ResourceInitializationException {
-		AnalysisEngine engine = AnalysisEngineFactory.createPrimitive(NoOpAnnotator.class,
-				null, configurationParameters);
-		return engine.getUimaContext();
-	}
+  /**
+   * Create a new UimaContext with the given configuration parameters set.
+   * 
+   * @param configurationParameters
+   *          The parameters to be set.
+   * @return The new UimaContext.
+   * @throws ResourceInitializationException
+   *           If the context could not be created.
+   */
+  public static UimaContext createUimaContext(Object... configurationParameters)
+          throws ResourceInitializationException {
+    AnalysisEngine engine = AnalysisEngineFactory.createPrimitive(NoOpAnnotator.class, null,
+            configurationParameters);
+    return engine.getUimaContext();
+  }
 
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/initializable/Initializable.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/initializable/Initializable.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/initializable/Initializable.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/initializable/Initializable.java Thu Jan 10 23:12:33 2013
@@ -33,7 +33,7 @@ import org.apache.uima.resource.Resource
  * is instantiated, it is useful to provide it a {@code UimaContext} so that it can initialize
  * itself based on configuration parameters.
  * </p>
- *
+ * 
  * <p>
  * As an example, consider the component {@link XWriter} which has a member variable of type
  * {@link XWriterFileNamer} which is an interface that provides a way for {@code XWriter} to come up
@@ -48,13 +48,13 @@ import org.apache.uima.resource.Resource
  * {@code XWriterFileNamer} does not have to implement {@code Initializable} if it has no need for
  * the initialize method.
  * </p>
- *
+ * 
  */
 public interface Initializable {
 
-	/**
-	 * This method will be called automatically if the implementing class is instantiated with
-	 * InitializableFactory.
-	 */
-	public void initialize(UimaContext context) throws ResourceInitializationException;
+  /**
+   * This method will be called automatically if the implementing class is instantiated with
+   * InitializableFactory.
+   */
+  public void initialize(UimaContext context) throws ResourceInitializationException;
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/initializable/InitializableFactory.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/initializable/InitializableFactory.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/initializable/InitializableFactory.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/initializable/InitializableFactory.java Thu Jan 10 23:12:33 2013
@@ -23,55 +23,53 @@ import org.apache.uima.resource.Resource
 
 /**
  * Please see {@link Initializable} for a description of how this class is intended to be used.
- *
- *
+ * 
+ * 
  * @see Initializable
  */
 public final class InitializableFactory {
-	private InitializableFactory() {
-		// This class is not meant to be instantiated
-	}
-
-	/**
-	 * Provides a way to create an instance of T. If the class specified by className implements
-	 * Initializable, then the UimaContext provided here will be passed to its initialize method.
-	 */
-	public static <T> T create(UimaContext context, String className, Class<T> superClass)
-			throws ResourceInitializationException {
-		Class<? extends T> cls = getClass(className, superClass);
-		return create(context, cls);
-	}
-
-	public static <T> Class<? extends T> getClass(String className, Class<T> superClass)
-			throws ResourceInitializationException {
-		try {
-			Class<? extends T> cls = Class.forName(className).asSubclass(superClass);
-			return cls;
-		}
-		catch (Exception e) {
-			throw new ResourceInitializationException(new IllegalStateException("classname = "
-					+ className + " superClass = " + superClass.getName(), e));
-		}
-	}
-
-	public static <T> T create(UimaContext context, Class<? extends T> cls)
-			throws ResourceInitializationException {
-		T instance;
-		try {
-			instance = cls.newInstance();
-		}
-		catch (Exception e) {
-			throw new ResourceInitializationException(e);
-		}
-		initialize(instance, context);
-		return instance;
-	}
-
-	public static void initialize(Object object, UimaContext context)
-			throws ResourceInitializationException {
-		if (object instanceof Initializable) {
-			((Initializable) object).initialize(context);
-		}
-	}
+  private InitializableFactory() {
+    // This class is not meant to be instantiated
+  }
+
+  /**
+   * Provides a way to create an instance of T. If the class specified by className implements
+   * Initializable, then the UimaContext provided here will be passed to its initialize method.
+   */
+  public static <T> T create(UimaContext context, String className, Class<T> superClass)
+          throws ResourceInitializationException {
+    Class<? extends T> cls = getClass(className, superClass);
+    return create(context, cls);
+  }
+
+  public static <T> Class<? extends T> getClass(String className, Class<T> superClass)
+          throws ResourceInitializationException {
+    try {
+      Class<? extends T> cls = Class.forName(className).asSubclass(superClass);
+      return cls;
+    } catch (Exception e) {
+      throw new ResourceInitializationException(new IllegalStateException("classname = "
+              + className + " superClass = " + superClass.getName(), e));
+    }
+  }
+
+  public static <T> T create(UimaContext context, Class<? extends T> cls)
+          throws ResourceInitializationException {
+    T instance;
+    try {
+      instance = cls.newInstance();
+    } catch (Exception e) {
+      throw new ResourceInitializationException(e);
+    }
+    initialize(instance, context);
+    return instance;
+  }
+
+  public static void initialize(Object object, UimaContext context)
+          throws ResourceInitializationException {
+    if (object instanceof Initializable) {
+      ((Initializable) object).initialize(context);
+    }
+  }
 
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/locator/JndiResourceLocator.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/locator/JndiResourceLocator.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/locator/JndiResourceLocator.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/locator/JndiResourceLocator.java Thu Jan 10 23:12:33 2013
@@ -31,34 +31,34 @@ import org.apache.uima.resource.Resource
 
 /**
  * Locate an object via JNDI.
- *
+ * 
  */
 public class JndiResourceLocator extends Resource_ImplBase implements ExternalResourceLocator {
-	public static final String PARAM_NAME = "Name";
-	@ConfigurationParameter(name = PARAM_NAME, mandatory = true)
-	private String jndiName;
-
-	private Object resource;
-
-	@SuppressWarnings("rawtypes")
-	@Override
-	public boolean initialize(ResourceSpecifier aSpecifier, Map aAdditionalParams)
-			throws ResourceInitializationException {
-		if (!super.initialize(aSpecifier, aAdditionalParams)) {
-			return false;
-		}
-
-		try {
-			InitialContext ctx = new InitialContext();
-			resource = ctx.lookup(jndiName);
-		}
-		catch (NamingException e) {
-			throw new ResourceInitializationException(e);
-		}
-		return true;
-	}
-
-	public Object getResource() {
-		return resource;
-	}
+  public static final String PARAM_NAME = "Name";
+
+  @ConfigurationParameter(name = PARAM_NAME, mandatory = true)
+  private String jndiName;
+
+  private Object resource;
+
+  @SuppressWarnings("rawtypes")
+  @Override
+  public boolean initialize(ResourceSpecifier aSpecifier, Map aAdditionalParams)
+          throws ResourceInitializationException {
+    if (!super.initialize(aSpecifier, aAdditionalParams)) {
+      return false;
+    }
+
+    try {
+      InitialContext ctx = new InitialContext();
+      resource = ctx.lookup(jndiName);
+    } catch (NamingException e) {
+      throw new ResourceInitializationException(e);
+    }
+    return true;
+  }
+
+  public Object getResource() {
+    return resource;
+  }
 }

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/package-info.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/package-info.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/package-info.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/factory/package-info.java Thu Jan 10 23:12:33 2013
@@ -20,3 +20,4 @@
  * Factories to create different kinds of UIMA resource specifiers.
  */
 package org.apache.uima.fit.factory;
+

Modified: uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/pipeline/CpePipeline.java
URL: http://svn.apache.org/viewvc/uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/pipeline/CpePipeline.java?rev=1431721&r1=1431720&r2=1431721&view=diff
==============================================================================
--- uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/pipeline/CpePipeline.java (original)
+++ uima/sandbox/uimafit/trunk/uimafit/src/main/java/org/apache/uima/fit/pipeline/CpePipeline.java Thu Jan 10 23:12:33 2013
@@ -39,100 +39,91 @@ import org.xml.sax.SAXException;
 /**
  */
 public class CpePipeline {
-	/**
-	 * Run the CollectionReader and AnalysisEngines as a multi-threaded pipeline.
-	 *
-	 * @param readerDesc
-	 *            The CollectionReader that loads the documents into the CAS.
-	 * @param descs
-	 *            Primitive AnalysisEngineDescriptions that process the CAS, in order. If you have a
-	 *            mix of primitive and aggregate engines, then please create the AnalysisEngines
-	 *            yourself and call the other runPipeline method.
-	 */
-	public static void runPipeline(final CollectionReaderDescription readerDesc,
-			final AnalysisEngineDescription... descs) throws UIMAException, SAXException,
-			CpeDescriptorException, IOException {
-		// Create AAE
-		final AnalysisEngineDescription aaeDesc = createAggregateDescription(descs);
-
-		CpeBuilder builder = new CpeBuilder();
-		builder.setReader(readerDesc);
-		builder.setAnalysisEngine(aaeDesc);
-		
-		StatusCallbackListenerImpl status = new StatusCallbackListenerImpl();
-		CollectionProcessingEngine engine = builder.createCpe(status);
-		
-		engine.process();
-		try {
-			synchronized (status) {
-				while (status.isProcessing) {
-					status.wait();
-				}
-			}
-		}
-		catch (InterruptedException e) {
-			// Do nothing
-		}
-
-		if (status.exceptions.size() > 0) {
-			throw new AnalysisEngineProcessException(status.exceptions.get(0));
-		}
-	}
-
-	private static class StatusCallbackListenerImpl
-		implements StatusCallbackListener
-	{
-
-		private final List<Exception> exceptions = new ArrayList<Exception>();
-		private boolean isProcessing = true;
-	
-		public void entityProcessComplete(CAS arg0, EntityProcessStatus arg1)
-		{
-			if (arg1.isException()) {
-				for (Exception e : arg1.getExceptions()) {
-					exceptions.add(e);
-				}
-			}
-		}
-	
-		public void aborted()
-		{
-			synchronized (this) {
-				if (isProcessing) {
-					isProcessing = false;
-					notify();
-				}
-			}
-		}
-	
-		public void batchProcessComplete()
-		{
-			// Do nothing
-		}
-	
-		public void collectionProcessComplete()
-		{
-			synchronized (this) {
-				if (isProcessing) {
-					isProcessing = false;
-					notify();
-				}
-			}
-		}
-	
-		public void initializationComplete()
-		{
-			// Do nothing
-		}
-	
-		public void paused()
-		{
-			// Do nothing
-		}
-	
-		public void resumed()
-		{
-			// Do nothing
-		}
-	}
+  /**
+   * Run the CollectionReader and AnalysisEngines as a multi-threaded pipeline.
+   * 
+   * @param readerDesc
+   *          The CollectionReader that loads the documents into the CAS.
+   * @param descs
+   *          Primitive AnalysisEngineDescriptions that process the CAS, in order. If you have a mix
+   *          of primitive and aggregate engines, then please create the AnalysisEngines yourself
+   *          and call the other runPipeline method.
+   */
+  public static void runPipeline(final CollectionReaderDescription readerDesc,
+          final AnalysisEngineDescription... descs) throws UIMAException, SAXException,
+          CpeDescriptorException, IOException {
+    // Create AAE
+    final AnalysisEngineDescription aaeDesc = createAggregateDescription(descs);
+
+    CpeBuilder builder = new CpeBuilder();
+    builder.setReader(readerDesc);
+    builder.setAnalysisEngine(aaeDesc);
+
+    StatusCallbackListenerImpl status = new StatusCallbackListenerImpl();
+    CollectionProcessingEngine engine = builder.createCpe(status);
+
+    engine.process();
+    try {
+      synchronized (status) {
+        while (status.isProcessing) {
+          status.wait();
+        }
+      }
+    } catch (InterruptedException e) {
+      // Do nothing
+    }
+
+    if (status.exceptions.size() > 0) {
+      throw new AnalysisEngineProcessException(status.exceptions.get(0));
+    }
+  }
+
+  private static class StatusCallbackListenerImpl implements StatusCallbackListener {
+
+    private final List<Exception> exceptions = new ArrayList<Exception>();
+
+    private boolean isProcessing = true;
+
+    public void entityProcessComplete(CAS arg0, EntityProcessStatus arg1) {
+      if (arg1.isException()) {
+        for (Exception e : arg1.getExceptions()) {
+          exceptions.add(e);
+        }
+      }
+    }
+
+    public void aborted() {
+      synchronized (this) {
+        if (isProcessing) {
+          isProcessing = false;
+          notify();
+        }
+      }
+    }
+
+    public void batchProcessComplete() {
+      // Do nothing
+    }
+
+    public void collectionProcessComplete() {
+      synchronized (this) {
+        if (isProcessing) {
+          isProcessing = false;
+          notify();
+        }
+      }
+    }
+
+    public void initializationComplete() {
+      // Do nothing
+    }
+
+    public void paused() {
+      // Do nothing
+    }
+
+    public void resumed() {
+      // Do nothing
+    }
+  }
 }