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Posted to issues@spark.apache.org by "Charles Gariépy-Ikeson (JIRA)" <ji...@apache.org> on 2016/06/08 20:58:21 UTC
[jira] [Created] (SPARK-15831) Kryo 2.21 TreeMap serialization bug
causes random job failures with RDDs of HBase puts
Charles Gariépy-Ikeson created SPARK-15831:
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Summary: Kryo 2.21 TreeMap serialization bug causes random job failures with RDDs of HBase puts
Key: SPARK-15831
URL: https://issues.apache.org/jira/browse/SPARK-15831
Project: Spark
Issue Type: Bug
Reporter: Charles Gariépy-Ikeson
This was found on Spark 1.5, but it seems that all Spark 1.x brings in the problematic dependency in question.
Kryo 2.21 has a bug when serializing TreeMap that causes intermittent failures in Spark. This problem cause be seen especially when sinking data to HBase using a RDD of HBase Puts (which internally have TreeMap).
Kryo fixed the issue in 2.21.1. Current work around involves setting "spark.kryo.referenceTracking" to false.
For reference see:
Kryo commit: https://github.com/EsotericSoftware/kryo/commit/00ffc7ed443e022a8438d1e4c4f5b86fe4f9912b
TreeMap Kryo Issue: https://github.com/EsotericSoftware/kryo/issues/112
HBase Put Kryo Issue: https://github.com/EsotericSoftware/kryo/issues/428
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