Build failed in Jenkins: beam_PostCommit_Python2 #454

[Apache Jenkins Server <je...@builds.apache.org>]

See <https://builds.apache.org/job/beam_PostCommit_Python2/454/display/redirect?page=changes>

Changes:

[ankurgoenka] [BEAM-8217] Encode str to bytes py3 in sdk harness status server

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[...truncated 392.41 KB...]
    Not uninstalling apache-beam at <https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python,> outside environment <https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/build/gradleenv/1866363813>
    Can't uninstall 'apache-beam'. No files were found to uninstall.
  Running setup.py develop for apache-beam
Successfully installed apache-beam
apache_beam/__init__.py:84: UserWarning: You are using Apache Beam with Python 2. New releases of Apache Beam will soon support Python 3 only.
  'You are using Apache Beam with Python 2. '
Starting expansion service at localhost:8096
log4j:WARN No appenders could be found for logger (org.apache.beam.vendor.grpc.v1p21p0.io.netty.util.internal.logging.InternalLoggerFactory).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
WARNING:root:Make sure that locally built Python SDK docker image has Python 2.7 interpreter.
Unable to find image 'jenkins-docker-apache.bintray.io/beam/flink-job-server:latest' locally
docker: Error response from daemon: unknown: Repo 'apache' was not found.
See 'docker run --help'.
ERROR:root:Starting job service with ['docker', 'run', '-v', u'/usr/bin/docker:/bin/docker', '-v', '/var/run/docker.sock:/var/run/docker.sock', '--network=host', 'jenkins-docker-apache.bintray.io/beam/flink-job-server:latest', '--job-host', 'localhost', '--job-port', '42741', '--artifact-port', '55389', '--expansion-port', '50257']
ERROR:root:Error bringing up job service
Traceback (most recent call last):
  File "apache_beam/runners/portability/job_server.py", line 124, in start
    self._process.poll())
RuntimeError: Job service failed to start up with error 125
Traceback (most recent call last):
  File "/usr/lib/python2.7/runpy.py", line 174, in _run_module_as_main
    "__main__", fname, loader, pkg_name)
  File "/usr/lib/python2.7/runpy.py", line 72, in _run_code
    exec code in run_globals
  File "<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/transforms/external_test.py",> line 230, in <module>
    ExternalTransformTest.run_pipeline_with_portable_runner(pipeline_options)
  File "<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/transforms/external_test.py",> line 185, in run_pipeline_with_portable_runner
    pipeline_options, ExternalTransformTest.expansion_service_port, True)
  File "<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/transforms/external_test.py",> line 213, in run_pipeline
    result = p.run()
  File "apache_beam/testing/test_pipeline.py", line 107, in run
    else test_runner_api))
  File "apache_beam/pipeline.py", line 420, in run
    return self.runner.run_pipeline(self, self._options)
  File "apache_beam/runners/portability/portable_runner.py", line 243, in run_pipeline
    job_service = self.create_job_service(options)
  File "apache_beam/runners/portability/portable_runner.py", line 161, in create_job_service
    return server.start()
  File "apache_beam/runners/portability/job_server.py", line 84, in start
    self._endpoint = self._job_server.start()
  File "apache_beam/runners/portability/job_server.py", line 124, in start
    self._process.poll())
RuntimeError: Job service failed to start up with error 125

> Task :sdks:python:test-suites:portable:py2:crossLanguagePythonJavaFlink FAILED

> Task :sdks:python:test-suites:direct:py2:mongodbioIT
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/mongodbio_it_test.py>:68: FutureWarning: WriteToMongoDB is experimental.
  known_args.batch_size)
INFO:root:==================== <function annotate_downstream_side_inputs at 0x7f1e9ee1d398> ====================
INFO:root:==================== <function fix_side_input_pcoll_coders at 0x7f1e9ee1d488> ====================
INFO:root:==================== <function lift_combiners at 0x7f1e9ee1d500> ====================
INFO:root:==================== <function expand_sdf at 0x7f1e9ee1d578> ====================
INFO:root:==================== <function expand_gbk at 0x7f1e9ee1d5f0> ====================
INFO:root:==================== <function sink_flattens at 0x7f1e9ee1d6e0> ====================
INFO:root:==================== <function greedily_fuse at 0x7f1e9ee1d758> ====================
INFO:root:==================== <function read_to_impulse at 0x7f1e9ee1d7d0> ====================
INFO:root:==================== <function impulse_to_input at 0x7f1e9ee1d848> ====================
INFO:root:==================== <function inject_timer_pcollections at 0x7f1e9ee1d9b0> ====================
INFO:root:==================== <function sort_stages at 0x7f1e9ee1da28> ====================
INFO:root:==================== <function window_pcollection_coders at 0x7f1e9ee1daa0> ====================
INFO:root:Running (ref_AppliedPTransform_Create documents/Read_3)+((ref_AppliedPTransform_WriteToMongoDB/ParDo(_GenerateObjectIdFn)_5)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/AddRandomKeys_7)+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/ReshufflePerKey/Map(reify_timestamps)_9)+(WriteToMongoDB/Reshuffle/ReshufflePerKey/GroupByKey/Write))))
INFO:root:Running ((WriteToMongoDB/Reshuffle/ReshufflePerKey/GroupByKey/Read)+(ref_AppliedPTransform_WriteToMongoDB/Reshuffle/ReshufflePerKey/FlatMap(restore_timestamps)_14))+((ref_AppliedPTransform_WriteToMongoDB/Reshuffle/RemoveRandomKeys_15)+(ref_AppliedPTransform_WriteToMongoDB/ParDo(_WriteMongoFn)_16))
INFO:root:Writing 100000 documents to mongodb finished in 53.385 seconds
INFO:root:Missing pipeline option (runner). Executing pipeline using the default runner: DirectRunner.
INFO:root:Reading from mongodb beam_mongodbio_it_db:integration_test_1568305840
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/mongodbio_it_test.py>:83: FutureWarning: ReadFromMongoDB is experimental.
  | 'Map' >> beam.Map(lambda doc: doc['number'])
INFO:root:==================== <function annotate_downstream_side_inputs at 0x7f1e9ee1d398> ====================
INFO:root:==================== <function fix_side_input_pcoll_coders at 0x7f1e9ee1d488> ====================
INFO:root:==================== <function lift_combiners at 0x7f1e9ee1d500> ====================
INFO:root:==================== <function expand_sdf at 0x7f1e9ee1d578> ====================
INFO:root:==================== <function expand_gbk at 0x7f1e9ee1d5f0> ====================
INFO:root:==================== <function sink_flattens at 0x7f1e9ee1d6e0> ====================
INFO:root:==================== <function greedily_fuse at 0x7f1e9ee1d758> ====================
INFO:root:==================== <function read_to_impulse at 0x7f1e9ee1d7d0> ====================
INFO:root:==================== <function impulse_to_input at 0x7f1e9ee1d848> ====================
INFO:root:==================== <function inject_timer_pcollections at 0x7f1e9ee1d9b0> ====================
INFO:root:==================== <function sort_stages at 0x7f1e9ee1da28> ====================
INFO:root:==================== <function window_pcollection_coders at 0x7f1e9ee1daa0> ====================
INFO:root:Running ((ref_AppliedPTransform_assert_that/Create/Read_7)+((ref_AppliedPTransform_assert_that/Group/pair_with_0_11)+(assert_that/Group/Flatten/Transcode/0)))+(assert_that/Group/Flatten/Write/0)
INFO:root:Running ((ref_AppliedPTransform_ReadFromMongoDB/Read_3)+((ref_AppliedPTransform_Map_4)+((ref_AppliedPTransform_assert_that/WindowInto(WindowIntoFn)_8)+((ref_AppliedPTransform_assert_that/ToVoidKey_9)+((ref_AppliedPTransform_assert_that/Group/pair_with_1_12)+(assert_that/Group/Flatten/Transcode/1))))))+(assert_that/Group/Flatten/Write/1)
INFO:root:Running (assert_that/Group/Flatten/Read)+(assert_that/Group/GroupByKey/Write)
INFO:root:Running (assert_that/Group/GroupByKey/Read)+((ref_AppliedPTransform_assert_that/Group/Map(_merge_tagged_vals_under_key)_18)+((ref_AppliedPTransform_assert_that/Unkey_19)+(ref_AppliedPTransform_assert_that/Match_20)))
INFO:root:Read 100000 documents from mongodb finished in 21.919 seconds
mongoioit27515
mongoioit27515

> Task :sdks:python:test-suites:dataflow:py2:postCommitIT
test_bigquery_tornadoes_it (apache_beam.examples.cookbook.bigquery_tornadoes_it_test.BigqueryTornadoesIT) ... ok
test_datastore_wordcount_it (apache_beam.examples.cookbook.datastore_wordcount_it_test.DatastoreWordCountIT) ... ok
test_autocomplete_it (apache_beam.examples.complete.autocomplete_test.AutocompleteTest) ... ok
test_leader_board_it (apache_beam.examples.complete.game.leader_board_it_test.LeaderBoardIT) ... ok
test_datastore_write_limit (apache_beam.io.gcp.datastore.v1new.datastore_write_it_test.DatastoreWriteIT) ... SKIP: GCP dependencies are not installed
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/runners/dataflow/dataflow_runner.py>:696: BeamDeprecationWarning: BigQuerySink is deprecated since 2.11.0. Use WriteToBigQuery instead.
  kms_key=transform.kms_key))
test_game_stats_it (apache_beam.examples.complete.game.game_stats_it_test.GameStatsIT) ... ok
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/gcp/bigquery_file_loads.py>:793: BeamDeprecationWarning: options is deprecated since First stable release. References to <pipeline>.options will not be supported
  temp_location = p.options.view_as(GoogleCloudOptions).temp_location
test_wordcount_it (apache_beam.examples.wordcount_it_test.WordCountIT) ... ok
test_streaming_wordcount_it (apache_beam.examples.streaming_wordcount_it_test.StreamingWordCountIT) ... ok
test_user_score_it (apache_beam.examples.complete.game.user_score_it_test.UserScoreIT) ... ok
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/gcp/bigquery_test.py>:577: BeamDeprecationWarning: options is deprecated since First stable release. References to <pipeline>.options will not be supported
  streaming = self.test_pipeline.options.view_as(StandardOptions).streaming
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/gcp/bigquery.py>:1145: BeamDeprecationWarning: options is deprecated since First stable release. References to <pipeline>.options will not be supported
  experiments = p.options.view_as(DebugOptions).experiments or []
test_wordcount_fnapi_it (apache_beam.examples.wordcount_it_test.WordCountIT) ... ok
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/gcp/bigquery.py>:1145: BeamDeprecationWarning: options is deprecated since First stable release. References to <pipeline>.options will not be supported
  experiments = p.options.view_as(DebugOptions).experiments or []
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/gcp/bigquery_file_loads.py>:793: BeamDeprecationWarning: options is deprecated since First stable release. References to <pipeline>.options will not be supported
  temp_location = p.options.view_as(GoogleCloudOptions).temp_location
test_avro_it (apache_beam.examples.fastavro_it_test.FastavroIT) ... ok
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/gcp/bigquery.py>:1142: BeamDeprecationWarning: options is deprecated since First stable release. References to <pipeline>.options will not be supported
  self.table_reference.projectId = pcoll.pipeline.options.view_as(
test_hourly_team_score_it (apache_beam.examples.complete.game.hourly_team_score_it_test.HourlyTeamScoreIT) ... ok
test_bigquery_read_1M_python (apache_beam.io.gcp.bigquery_io_read_it_test.BigqueryIOReadIT) ... ok
test_value_provider_transform (apache_beam.io.gcp.bigquery_test.BigQueryStreamingInsertTransformIntegrationTests) ... ok
test_multiple_destinations_transform (apache_beam.io.gcp.bigquery_test.BigQueryStreamingInsertTransformIntegrationTests) ... ok
test_copy (apache_beam.io.gcp.gcsio_integration_test.GcsIOIntegrationTest) ... ok
test_copy_batch (apache_beam.io.gcp.gcsio_integration_test.GcsIOIntegrationTest) ... ok
test_copy_batch_kms (apache_beam.io.gcp.gcsio_integration_test.GcsIOIntegrationTest) ... ok
test_copy_batch_rewrite_token (apache_beam.io.gcp.gcsio_integration_test.GcsIOIntegrationTest) ... ok
test_copy_kms (apache_beam.io.gcp.gcsio_integration_test.GcsIOIntegrationTest) ... ok
test_copy_rewrite_token (apache_beam.io.gcp.gcsio_integration_test.GcsIOIntegrationTest) ... ok
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/fileio_test.py>:232: FutureWarning: MatchAll is experimental.
  | 'GetPath' >> beam.Map(lambda metadata: metadata.path))
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/fileio_test.py>:243: FutureWarning: MatchAll is experimental.
  | 'Checksums' >> beam.Map(compute_hash))
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/fileio_test.py>:243: FutureWarning: ReadMatches is experimental.
  | 'Checksums' >> beam.Map(compute_hash))
test_bqfl_streaming (apache_beam.io.gcp.bigquery_file_loads_test.BigQueryFileLoadsIT) ... SKIP: TestStream is not supported on TestDataflowRunner
test_multiple_destinations_transform (apache_beam.io.gcp.bigquery_file_loads_test.BigQueryFileLoadsIT) ... ok
test_one_job_fails_all_jobs_fail (apache_beam.io.gcp.bigquery_file_loads_test.BigQueryFileLoadsIT) ... ok
test_big_query_read (apache_beam.io.gcp.bigquery_read_it_test.BigQueryReadIntegrationTests) ... ok
test_big_query_read_new_types (apache_beam.io.gcp.bigquery_read_it_test.BigQueryReadIntegrationTests) ... ok
test_transform_on_gcs (apache_beam.io.fileio_test.MatchIntegrationTest) ... ok
test_file_loads (apache_beam.io.gcp.bigquery_test.PubSubBigQueryIT) ... SKIP: https://issuetracker.google.com/issues/118375066
test_streaming_inserts (apache_beam.io.gcp.bigquery_test.PubSubBigQueryIT) ... ok
<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/apache_beam/io/gcp/big_query_query_to_table_pipeline.py>:73: BeamDeprecationWarning: BigQuerySink is deprecated since 2.11.0. Use WriteToBigQuery instead.
  kms_key=kms_key))
test_parquetio_it (apache_beam.io.parquetio_it_test.TestParquetIT) ... ok
test_streaming_data_only (apache_beam.io.gcp.pubsub_integration_test.PubSubIntegrationTest) ... ok
test_streaming_with_attributes (apache_beam.io.gcp.pubsub_integration_test.PubSubIntegrationTest) ... ok
Runs streaming Dataflow job and verifies that user metrics are reported ... ok
test_job_python_from_python_it (apache_beam.transforms.external_test_it.ExternalTransformIT) ... ok
test_big_query_legacy_sql (apache_beam.io.gcp.big_query_query_to_table_it_test.BigQueryQueryToTableIT) ... ok
test_big_query_new_types (apache_beam.io.gcp.big_query_query_to_table_it_test.BigQueryQueryToTableIT) ... ok
test_big_query_standard_sql (apache_beam.io.gcp.big_query_query_to_table_it_test.BigQueryQueryToTableIT) ... ok
test_big_query_standard_sql_kms_key_native (apache_beam.io.gcp.big_query_query_to_table_it_test.BigQueryQueryToTableIT) ... ok
test_big_query_write (apache_beam.io.gcp.bigquery_write_it_test.BigQueryWriteIntegrationTests) ... ok
test_big_query_write_new_types (apache_beam.io.gcp.bigquery_write_it_test.BigQueryWriteIntegrationTests) ... ok
test_big_query_write_schema_autodetect (apache_beam.io.gcp.bigquery_write_it_test.BigQueryWriteIntegrationTests) ... SKIP: DataflowRunner does not support schema autodetection
test_big_query_write_without_schema (apache_beam.io.gcp.bigquery_write_it_test.BigQueryWriteIntegrationTests) ... ok
test_metrics_fnapi_it (apache_beam.runners.dataflow.dataflow_exercise_metrics_pipeline_test.ExerciseMetricsPipelineTest) ... ok
test_metrics_it (apache_beam.runners.dataflow.dataflow_exercise_metrics_pipeline_test.ExerciseMetricsPipelineTest) ... ok
test_datastore_write_limit (apache_beam.io.gcp.datastore_write_it_test.DatastoreWriteIT) ... ok

----------------------------------------------------------------------
XML: nosetests-postCommitIT-df.xml
----------------------------------------------------------------------
XML: <https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/nosetests.xml>
----------------------------------------------------------------------
Ran 45 tests in 4318.043s

OK (SKIP=4)
Worker logs: https://console.cloud.google.com/dataflow/jobsDetail/locations/us-central1/jobs/2019-09-12_09_26_12-11592687509176475619?project=apache-beam-testing
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FAILURE: Build completed with 2 failures.

1: Task failed with an exception.
-----------
* Where:
Build file '<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/test-suites/portable/py2/build.gradle'> line: 131

* What went wrong:
Execution failed for task ':sdks:python:test-suites:portable:py2:crossLanguagePortableWordCount'.
> Process 'command 'sh'' finished with non-zero exit value 1

* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights.
==============================================================================

2: Task failed with an exception.
-----------
* Where:
Build file '<https://builds.apache.org/job/beam_PostCommit_Python2/ws/src/sdks/python/test-suites/portable/py2/build.gradle'> line: 105

* What went wrong:
Execution failed for task ':sdks:python:test-suites:portable:py2:crossLanguagePythonJavaFlink'.
> Process 'command 'sh'' finished with non-zero exit value 1

* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights.
==============================================================================

* Get more help at https://help.gradle.org

Deprecated Gradle features were used in this build, making it incompatible with Gradle 6.0.
Use '--warning-mode all' to show the individual deprecation warnings.
See https://docs.gradle.org/5.2.1/userguide/command_line_interface.html#sec:command_line_warnings

BUILD FAILED in 1h 12m 57s
111 actionable tasks: 86 executed, 22 from cache, 3 up-to-date

Publishing build scan...
https://gradle.com/s/z3k22vnxkcy5o

Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure

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