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Posted to issues@spark.apache.org by "Sean Owen (JIRA)" <ji...@apache.org> on 2014/09/17 09:41:33 UTC
[jira] [Commented] (SPARK-3563) Shuffle data not always be cleaned
[ https://issues.apache.org/jira/browse/SPARK-3563?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14136899#comment-14136899 ]
Sean Owen commented on SPARK-3563:
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I am no expert, but I believe this is on purpose, in order to reuse the shuffle if the RDD partition needs to be recomputed. You may need to set a lower spark.cleaner.ttl?
> Shuffle data not always be cleaned
> ----------------------------------
>
> Key: SPARK-3563
> URL: https://issues.apache.org/jira/browse/SPARK-3563
> Project: Spark
> Issue Type: Bug
> Components: core
> Affects Versions: 1.0.2
> Reporter: shenhong
>
> In our cluster, when we run a spark streaming job, after running for many hours, the shuffle data seems not all be cleaned, here is the shuffle data:
> -rw-r----- 1 tdwadmin users 23948 Sep 17 13:21 shuffle_132_34_0
> -rw-r----- 1 tdwadmin users 18237 Sep 17 13:32 shuffle_143_22_1
> -rw-r----- 1 tdwadmin users 22934 Sep 17 13:35 shuffle_146_15_0
> -rw-r----- 1 tdwadmin users 27666 Sep 17 13:35 shuffle_146_36_1
> -rw-r----- 1 tdwadmin users 12864 Sep 17 14:05 shuffle_176_12_0
> -rw-r----- 1 tdwadmin users 22115 Sep 17 14:05 shuffle_176_33_1
> -rw-r----- 1 tdwadmin users 15666 Sep 17 14:21 shuffle_192_0_1
> -rw-r----- 1 tdwadmin users 13916 Sep 17 14:38 shuffle_209_53_0
> -rw-r----- 1 tdwadmin users 20031 Sep 17 14:41 shuffle_212_26_0
> -rw-r----- 1 tdwadmin users 15158 Sep 17 14:41 shuffle_212_47_1
> -rw-r----- 1 tdwadmin users 42880 Sep 17 12:12 shuffle_63_1_1
> -rw-r----- 1 tdwadmin users 32030 Sep 17 12:14 shuffle_65_40_0
> -rw-r----- 1 tdwadmin users 34477 Sep 17 12:33 shuffle_84_2_1
> The shuffle data of stage 63, 65, 84, 132... are not cleaned.
> In ContextCleaner, it maintains a weak reference for each RDD, ShuffleDependency, and Broadcast of interest, to be processed when the associated object goes out of scope of the application. Actual cleanup is performed in a separate daemon thread.
> There must be some reference for ShuffleDependency , and it's hard to find out.
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