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Posted to commits@ctakes.apache.org by ja...@apache.org on 2013/11/14 20:57:47 UTC
svn commit: r1542043 [1/3] - in /ctakes/branches/ctakes-3.1.1: ./
ctakes-assertion-res/ ctakes-assertion-zoner-res/ ctakes-assertion-zoner/
ctakes-assertion/ ctakes-chunker-res/ ctakes-chunker/
ctakes-clinical-pipeline/ ctakes-constituency-parser-res/ ...
Author: james-masanz
Date: Thu Nov 14 19:57:46 2013
New Revision: 1542043
URL: http://svn.apache.org/r1542043
Log:
[maven-release-plugin] prepare release ctakes-3.1.1-rc1
Modified:
ctakes/branches/ctakes-3.1.1/ctakes-assertion-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-assertion/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-chunker-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-chunker/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-clinical-pipeline/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-context-tokenizer/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-core-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-core/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-coreference-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-coreference/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-dictionary-lookup-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-dictionary-lookup/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-distribution/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-drug-ner-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-drug-ner/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-examples/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-lvg-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-lvg/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-ne-contexts-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-ne-contexts/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-pad-term-spotter-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-pad-term-spotter/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-pos-tagger-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-pos-tagger/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-preprocessor/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-regression-test/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-relation-extractor-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-relation-extractor/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-side-effect-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-side-effect/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-smoking-status-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-smoking-status/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-template-filler/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-temporal-res/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-temporal/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-type-system/pom.xml
ctakes/branches/ctakes-3.1.1/ctakes-utils/pom.xml
ctakes/branches/ctakes-3.1.1/pom.xml
Modified: ctakes/branches/ctakes-3.1.1/ctakes-assertion-res/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-assertion-res/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-assertion-res/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-assertion-res/pom.xml Thu Nov 14 19:57:46 2013
@@ -24,7 +24,7 @@
<parent>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
+ <version>3.1.1</version>
</parent>
<artifactId>ctakes-assertion-res</artifactId>
<name>Apache cTAKES Resources assertion</name>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner-res/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner-res/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner-res/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner-res/pom.xml Thu Nov 14 19:57:46 2013
@@ -24,7 +24,7 @@
<parent>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
+ <version>3.1.1</version>
</parent>
<artifactId>ctakes-assertion-zoner-res</artifactId>
<name>Apache cTAKES Resources assertion-zoner</name>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-assertion-zoner/pom.xml Thu Nov 14 19:57:46 2013
@@ -1,65 +1,65 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-
- Licensed to the Apache Software Foundation (ASF) under one
- or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information
- regarding copyright ownership. The ASF licenses this file
- to you under the Apache License, Version 2.0 (the
- "License"); you may not use this file except in compliance
- with the License. You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing,
- software distributed under the License is distributed on an
- "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- KIND, either express or implied. See the License for the
- specific language governing permissions and limitations
- under the License.
-
--->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-assertion-zoner</artifactId>
- <name>Apache cTAKES Assertion's zoner</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
- </parent>
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-assertion-zoner-res</artifactId>
- </dependency>
- <dependency>
- <groupId>net.sf.mastif</groupId>
- <artifactId>mastif-zoner</artifactId>
- <version>1.4</version>
- </dependency>
- <dependency>
- <groupId>org.apache.uima</groupId>
- <artifactId>uimaj-core</artifactId>
- </dependency>
- <dependency>
- <groupId>org.uimafit</groupId>
- <artifactId>uimafit</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core</artifactId>
- </dependency>
- </dependencies>
- <build>
- <plugins>
- <plugin>
- <groupId>org.cleartk</groupId>
- <artifactId>jcasgen-maven-plugin</artifactId>
- <configuration>
- <typeSystem>src/main/resources/org/apache/ctakes/assertion/zoner/types/TypeSystem.xml</typeSystem>
- </configuration>
- </plugin>
- </plugins>
- </build>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+ Licensed to the Apache Software Foundation (ASF) under one
+ or more contributor license agreements. See the NOTICE file
+ distributed with this work for additional information
+ regarding copyright ownership. The ASF licenses this file
+ to you under the Apache License, Version 2.0 (the
+ "License"); you may not use this file except in compliance
+ with the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing,
+ software distributed under the License is distributed on an
+ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ KIND, either express or implied. See the License for the
+ specific language governing permissions and limitations
+ under the License.
+
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-assertion-zoner</artifactId>
+ <name>Apache cTAKES Assertion's zoner</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.1</version>
+ </parent>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-assertion-zoner-res</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>net.sf.mastif</groupId>
+ <artifactId>mastif-zoner</artifactId>
+ <version>1.4</version>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.uima</groupId>
+ <artifactId>uimaj-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.uimafit</groupId>
+ <artifactId>uimafit</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core</artifactId>
+ </dependency>
+ </dependencies>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.cleartk</groupId>
+ <artifactId>jcasgen-maven-plugin</artifactId>
+ <configuration>
+ <typeSystem>src/main/resources/org/apache/ctakes/assertion/zoner/types/TypeSystem.xml</typeSystem>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+</project>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-assertion/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-assertion/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-assertion/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-assertion/pom.xml Thu Nov 14 19:57:46 2013
@@ -1,239 +1,239 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-
- Licensed to the Apache Software Foundation (ASF) under one
- or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information
- regarding copyright ownership. The ASF licenses this file
- to you under the Apache License, Version 2.0 (the
- "License"); you may not use this file except in compliance
- with the License. You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing,
- software distributed under the License is distributed on an
- "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- KIND, either express or implied. See the License for the
- specific language governing permissions and limitations
- under the License.
-
--->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-assertion</artifactId>
- <name>Apache cTAKES Assertion</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
- </parent>
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-assertion-res</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-assertion-zoner</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-type-system</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-dictionary-lookup</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-constituency-parser</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-utils</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-pos-tagger</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-dependency-parser</artifactId>
- </dependency>
- <dependency>
- <groupId>org.cleartk</groupId>
- <artifactId>cleartk-ml</artifactId>
- </dependency>
- <dependency>
- <groupId>org.cleartk</groupId>
- <artifactId>cleartk-ml-libsvm</artifactId>
- </dependency>
- <dependency>
- <groupId>org.cleartk</groupId>
- <artifactId>cleartk-ml-opennlp-maxent</artifactId>
- </dependency>
- <dependency>
- <groupId>org.cleartk</groupId>
- <artifactId>cleartk-util</artifactId>
- </dependency>
- <dependency>
- <groupId>org.cleartk</groupId>
- <artifactId>cleartk-eval</artifactId>
- </dependency>
- <dependency>
- <groupId>args4j</groupId>
- <artifactId>args4j</artifactId>
- </dependency>
- <dependency>
- <groupId>commons-io</groupId>
- <artifactId>commons-io</artifactId>
- </dependency>
- <dependency>
- <groupId>commons-lang</groupId>
- <artifactId>commons-lang</artifactId>
- </dependency>
- <dependency>
- <groupId>commons-logging</groupId>
- <artifactId>commons-logging</artifactId>
- </dependency>
- <dependency>
- <groupId>com.google.guava</groupId>
- <artifactId>guava</artifactId>
- </dependency>
- <dependency>
- <groupId>commons-cli</groupId>
- <artifactId>commons-cli</artifactId>
- </dependency>
- <dependency>
- <groupId>com.carrotsearch</groupId>
- <artifactId>hppc</artifactId>
- </dependency>
-
-
- <dependency>
- <groupId>jdom</groupId>
- <artifactId>jdom</artifactId>
- </dependency>
-
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- </dependency>
-
- <dependency>
- <groupId>log4j</groupId>
- <artifactId>log4j</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.opennlp</groupId>
- <artifactId>opennlp-maxent</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.opennlp</groupId>
- <artifactId>opennlp-tools</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.lucene</groupId>
- <artifactId>lucene-core</artifactId>
- </dependency>
- <dependency>
- <groupId>tw.edu.ntu.csie</groupId>
- <artifactId>libsvm</artifactId>
- </dependency>
-
- <dependency>
- <groupId>org.springframework</groupId>
- <artifactId>spring-core</artifactId>
- </dependency>
-
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- </dependency>
- <dependency>
- <groupId>org.uimafit</groupId>
- <artifactId>uimafit</artifactId>
- </dependency>
-
- <dependency>
- <groupId>org.codehaus.jackson</groupId>
- <artifactId>jackson-core-asl</artifactId>
- <version>1.5.0</version>
- </dependency>
- <dependency>
- <groupId>org.codehaus.jackson</groupId>
- <artifactId>jackson-mapper-asl</artifactId>
- <version>1.5.0</version>
- </dependency>
-
- <dependency>
- <groupId>org.scala-lang</groupId>
- <artifactId>scala-library</artifactId>
- <version>2.9.0</version>
- </dependency>
- <dependency>
- <groupId>org.scala-tools.sbinary</groupId>
- <artifactId>sbinary_2.9.0</artifactId>
- <version>0.4.0</version>
- </dependency>
-
- <!-- Dependencies that still need to be uploaded to Maven Central; when
- done, the dependency versions should be moved into the parent pom -->
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-i2b2</artifactId>
- <version>1.2</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-zoner</artifactId>
- <version>1.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/lib/med-facts-zoner-1.1.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.core</groupId>
- <artifactId>jcarafe.core</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.ext</groupId>
- <artifactId>jcarafe.ext</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-lvg</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-context-tokenizer</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-chunker</artifactId>
- </dependency>
- </dependencies>
- <build>
- <plugins>
- <plugin>
- <groupId>org.cleartk</groupId>
- <artifactId>jcasgen-maven-plugin</artifactId>
- <configuration>
- <typeSystem>src/main/resources/org/apache/ctakes/assertion/types/TypeSystem.xml</typeSystem>
- </configuration>
- </plugin>
- </plugins>
- </build>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+ Licensed to the Apache Software Foundation (ASF) under one
+ or more contributor license agreements. See the NOTICE file
+ distributed with this work for additional information
+ regarding copyright ownership. The ASF licenses this file
+ to you under the Apache License, Version 2.0 (the
+ "License"); you may not use this file except in compliance
+ with the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing,
+ software distributed under the License is distributed on an
+ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ KIND, either express or implied. See the License for the
+ specific language governing permissions and limitations
+ under the License.
+
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-assertion</artifactId>
+ <name>Apache cTAKES Assertion</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.1</version>
+ </parent>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-assertion-res</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-assertion-zoner</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-type-system</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dictionary-lookup</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-constituency-parser</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-utils</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-pos-tagger</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dependency-parser</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.cleartk</groupId>
+ <artifactId>cleartk-ml</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.cleartk</groupId>
+ <artifactId>cleartk-ml-libsvm</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.cleartk</groupId>
+ <artifactId>cleartk-ml-opennlp-maxent</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.cleartk</groupId>
+ <artifactId>cleartk-util</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.cleartk</groupId>
+ <artifactId>cleartk-eval</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>args4j</groupId>
+ <artifactId>args4j</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>commons-io</groupId>
+ <artifactId>commons-io</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>commons-lang</groupId>
+ <artifactId>commons-lang</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>commons-logging</groupId>
+ <artifactId>commons-logging</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>com.google.guava</groupId>
+ <artifactId>guava</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>commons-cli</groupId>
+ <artifactId>commons-cli</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>com.carrotsearch</groupId>
+ <artifactId>hppc</artifactId>
+ </dependency>
+
+
+ <dependency>
+ <groupId>jdom</groupId>
+ <artifactId>jdom</artifactId>
+ </dependency>
+
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ </dependency>
+
+ <dependency>
+ <groupId>log4j</groupId>
+ <artifactId>log4j</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.opennlp</groupId>
+ <artifactId>opennlp-maxent</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.opennlp</groupId>
+ <artifactId>opennlp-tools</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.lucene</groupId>
+ <artifactId>lucene-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>tw.edu.ntu.csie</groupId>
+ <artifactId>libsvm</artifactId>
+ </dependency>
+
+ <dependency>
+ <groupId>org.springframework</groupId>
+ <artifactId>spring-core</artifactId>
+ </dependency>
+
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.uimafit</groupId>
+ <artifactId>uimafit</artifactId>
+ </dependency>
+
+ <dependency>
+ <groupId>org.codehaus.jackson</groupId>
+ <artifactId>jackson-core-asl</artifactId>
+ <version>1.5.0</version>
+ </dependency>
+ <dependency>
+ <groupId>org.codehaus.jackson</groupId>
+ <artifactId>jackson-mapper-asl</artifactId>
+ <version>1.5.0</version>
+ </dependency>
+
+ <dependency>
+ <groupId>org.scala-lang</groupId>
+ <artifactId>scala-library</artifactId>
+ <version>2.9.0</version>
+ </dependency>
+ <dependency>
+ <groupId>org.scala-tools.sbinary</groupId>
+ <artifactId>sbinary_2.9.0</artifactId>
+ <version>0.4.0</version>
+ </dependency>
+
+ <!-- Dependencies that still need to be uploaded to Maven Central; when
+ done, the dependency versions should be moved into the parent pom -->
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-i2b2</artifactId>
+ <version>1.2</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-zoner</artifactId>
+ <version>1.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/lib/med-facts-zoner-1.1.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.core</groupId>
+ <artifactId>jcarafe.core</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.ext</groupId>
+ <artifactId>jcarafe.ext</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-lvg</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-context-tokenizer</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-chunker</artifactId>
+ </dependency>
+ </dependencies>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.cleartk</groupId>
+ <artifactId>jcasgen-maven-plugin</artifactId>
+ <configuration>
+ <typeSystem>src/main/resources/org/apache/ctakes/assertion/types/TypeSystem.xml</typeSystem>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+</project>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-chunker-res/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-chunker-res/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-chunker-res/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-chunker-res/pom.xml Thu Nov 14 19:57:46 2013
@@ -24,7 +24,7 @@
<parent>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
+ <version>3.1.1</version>
</parent>
<artifactId>ctakes-chunker-res</artifactId>
<name>Apache cTAKES Resources ctakes-chunker-res</name>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-chunker/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-chunker/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-chunker/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-chunker/pom.xml Thu Nov 14 19:57:46 2013
@@ -1,69 +1,69 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-
- Licensed to the Apache Software Foundation (ASF) under one
- or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information
- regarding copyright ownership. The ASF licenses this file
- to you under the Apache License, Version 2.0 (the
- "License"); you may not use this file except in compliance
- with the License. You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing,
- software distributed under the License is distributed on an
- "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- KIND, either express or implied. See the License for the
- specific language governing permissions and limitations
- under the License.
-
--->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-chunker</artifactId>
- <name>Apache cTAKES chunker</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
- </parent>
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-chunker-res</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-type-system</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-utils</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-pos-tagger</artifactId>
- </dependency>
- <dependency>
- <groupId>log4j</groupId>
- <artifactId>log4j</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.opennlp</groupId>
- <artifactId>opennlp-maxent</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.opennlp</groupId>
- <artifactId>opennlp-tools</artifactId>
- </dependency>
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- </dependency>
- </dependencies>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+ Licensed to the Apache Software Foundation (ASF) under one
+ or more contributor license agreements. See the NOTICE file
+ distributed with this work for additional information
+ regarding copyright ownership. The ASF licenses this file
+ to you under the Apache License, Version 2.0 (the
+ "License"); you may not use this file except in compliance
+ with the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing,
+ software distributed under the License is distributed on an
+ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ KIND, either express or implied. See the License for the
+ specific language governing permissions and limitations
+ under the License.
+
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-chunker</artifactId>
+ <name>Apache cTAKES chunker</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.1</version>
+ </parent>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-chunker-res</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-type-system</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-utils</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-pos-tagger</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>log4j</groupId>
+ <artifactId>log4j</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.opennlp</groupId>
+ <artifactId>opennlp-maxent</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.opennlp</groupId>
+ <artifactId>opennlp-tools</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ </dependency>
+ </dependencies>
+</project>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-clinical-pipeline/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-clinical-pipeline/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-clinical-pipeline/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-clinical-pipeline/pom.xml Thu Nov 14 19:57:46 2013
@@ -1,234 +1,234 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!-- Licensed to the Apache Software Foundation (ASF) under one or more contributor
- license agreements. See the NOTICE file distributed with this work for additional
- information regarding copyright ownership. The ASF licenses this file to
- you under the Apache License, Version 2.0 (the "License"); you may not use
- this file except in compliance with the License. You may obtain a copy of
- the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required
- by applicable law or agreed to in writing, software distributed under the
- License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS
- OF ANY KIND, either express or implied. See the License for the specific
- language governing permissions and limitations under the License. -->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-clinical-pipeline</artifactId>
- <name>Apache cTAKES ctakes-clinical-pipeline</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
- </parent>
-
-
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-type-system</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-utils</artifactId>
- </dependency>
- <dependency>
- <groupId>jdom</groupId>
- <artifactId>jdom</artifactId>
- </dependency>
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-context-tokenizer</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-dictionary-lookup</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-preprocessor</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-lvg</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-chunker</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-ne-contexts</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-pos-tagger</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-assertion</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-dependency-parser</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-dependency-parser-res</artifactId>
- </dependency>
- </dependencies>
- <profiles>
- <profile>
- <id>runCPE</id>
- <activation>
- <property>
- <name>runCPE</name>
- </property>
- </activation>
- <build>
- <plugins>
- <plugin>
- <groupId>org.codehaus.mojo</groupId>
- <artifactId>exec-maven-plugin</artifactId>
- <version>1.2.1</version>
- <executions>
- <execution>
- <!-- depends on other modules being on classpath -->
- <phase>compile</phase>
- <goals>
- <goal>java</goal>
- </goals>
- </execution>
- </executions>
- <configuration>
- <includeProjectDependencies>true</includeProjectDependencies>
- <includePluginDependencies>true</includePluginDependencies>
- <mainClass>org.apache.uima.tools.cpm.CpmFrame</mainClass>
- <arguments>
- <argument />
- </arguments>
- </configuration>
- <dependencies>
- <!-- System lib dependencies is causing a world of pain. Remove these
- when they're uploaded to Maven Central -->
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-i2b2</artifactId>
- <version>1.2</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-zoner</artifactId>
- <version>1.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-zoner-1.1.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.core</groupId>
- <artifactId>jcarafe.core</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.ext</groupId>
- <artifactId>jcarafe.ext</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>gov.nih.nlm.nls.lvg</groupId>
- <artifactId>lvg2010dist</artifactId>
- <version>0.0.1</version>
- </dependency>
- </dependencies>
- </plugin>
- </plugins>
- </build>
- </profile>
-
- <profile>
- <id>runCVD</id>
- <activation>
- <property>
- <name>runCVD</name>
- </property>
- </activation>
- <build>
- <plugins>
- <plugin>
- <groupId>org.codehaus.mojo</groupId>
- <artifactId>exec-maven-plugin</artifactId>
- <version>1.2.1</version>
- <executions>
- <execution>
- <!-- depends on other modules being on classpath -->
- <phase>compile</phase>
- <goals>
- <goal>java</goal>
- </goals>
- </execution>
- </executions>
- <configuration>
- <includeProjectDependencies>true</includeProjectDependencies>
- <includePluginDependencies>true</includePluginDependencies>
-
- <mainClass>org.apache.uima.tools.cvd.CVD</mainClass>
- <!-- Have to specify at least one parameter otherwise, CVD thinks
- it's an invalid param because MVN passes null when joining to the mvn thread -->
- <arguments>
- <argument>-lookandfeel</argument>
- <argument>javax.swing.plaf.metal.MetalLookAndFeel</argument>
- </arguments>
- </configuration>
- <dependencies>
- <!-- System lib dependencies is causing a world of pain. Remove these
- when they're uploaded to Maven Central -->
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-i2b2</artifactId>
- <version>1.2</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-zoner</artifactId>
- <version>1.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-zoner-1.1.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.core</groupId>
- <artifactId>jcarafe.core</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.ext</groupId>
- <artifactId>jcarafe.ext</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>gov.nih.nlm.nls.lvg</groupId>
- <artifactId>lvg2010dist</artifactId>
- <version>0.0.1</version>
- </dependency>
- </dependencies>
- </plugin>
- </plugins>
- </build>
- </profile>
- </profiles>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!-- Licensed to the Apache Software Foundation (ASF) under one or more contributor
+ license agreements. See the NOTICE file distributed with this work for additional
+ information regarding copyright ownership. The ASF licenses this file to
+ you under the Apache License, Version 2.0 (the "License"); you may not use
+ this file except in compliance with the License. You may obtain a copy of
+ the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required
+ by applicable law or agreed to in writing, software distributed under the
+ License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS
+ OF ANY KIND, either express or implied. See the License for the specific
+ language governing permissions and limitations under the License. -->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-clinical-pipeline</artifactId>
+ <name>Apache cTAKES ctakes-clinical-pipeline</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.1</version>
+ </parent>
+
+
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-type-system</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-utils</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>jdom</groupId>
+ <artifactId>jdom</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-context-tokenizer</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dictionary-lookup</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-preprocessor</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-lvg</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-chunker</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-ne-contexts</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-pos-tagger</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-assertion</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dependency-parser</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dependency-parser-res</artifactId>
+ </dependency>
+ </dependencies>
+ <profiles>
+ <profile>
+ <id>runCPE</id>
+ <activation>
+ <property>
+ <name>runCPE</name>
+ </property>
+ </activation>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.codehaus.mojo</groupId>
+ <artifactId>exec-maven-plugin</artifactId>
+ <version>1.2.1</version>
+ <executions>
+ <execution>
+ <!-- depends on other modules being on classpath -->
+ <phase>compile</phase>
+ <goals>
+ <goal>java</goal>
+ </goals>
+ </execution>
+ </executions>
+ <configuration>
+ <includeProjectDependencies>true</includeProjectDependencies>
+ <includePluginDependencies>true</includePluginDependencies>
+ <mainClass>org.apache.uima.tools.cpm.CpmFrame</mainClass>
+ <arguments>
+ <argument />
+ </arguments>
+ </configuration>
+ <dependencies>
+ <!-- System lib dependencies is causing a world of pain. Remove these
+ when they're uploaded to Maven Central -->
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-i2b2</artifactId>
+ <version>1.2</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-zoner</artifactId>
+ <version>1.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-zoner-1.1.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.core</groupId>
+ <artifactId>jcarafe.core</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.ext</groupId>
+ <artifactId>jcarafe.ext</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>gov.nih.nlm.nls.lvg</groupId>
+ <artifactId>lvg2010dist</artifactId>
+ <version>0.0.1</version>
+ </dependency>
+ </dependencies>
+ </plugin>
+ </plugins>
+ </build>
+ </profile>
+
+ <profile>
+ <id>runCVD</id>
+ <activation>
+ <property>
+ <name>runCVD</name>
+ </property>
+ </activation>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.codehaus.mojo</groupId>
+ <artifactId>exec-maven-plugin</artifactId>
+ <version>1.2.1</version>
+ <executions>
+ <execution>
+ <!-- depends on other modules being on classpath -->
+ <phase>compile</phase>
+ <goals>
+ <goal>java</goal>
+ </goals>
+ </execution>
+ </executions>
+ <configuration>
+ <includeProjectDependencies>true</includeProjectDependencies>
+ <includePluginDependencies>true</includePluginDependencies>
+
+ <mainClass>org.apache.uima.tools.cvd.CVD</mainClass>
+ <!-- Have to specify at least one parameter otherwise, CVD thinks
+ it's an invalid param because MVN passes null when joining to the mvn thread -->
+ <arguments>
+ <argument>-lookandfeel</argument>
+ <argument>javax.swing.plaf.metal.MetalLookAndFeel</argument>
+ </arguments>
+ </configuration>
+ <dependencies>
+ <!-- System lib dependencies is causing a world of pain. Remove these
+ when they're uploaded to Maven Central -->
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-i2b2</artifactId>
+ <version>1.2</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-zoner</artifactId>
+ <version>1.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-zoner-1.1.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.core</groupId>
+ <artifactId>jcarafe.core</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.ext</groupId>
+ <artifactId>jcarafe.ext</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>gov.nih.nlm.nls.lvg</groupId>
+ <artifactId>lvg2010dist</artifactId>
+ <version>0.0.1</version>
+ </dependency>
+ </dependencies>
+ </plugin>
+ </plugins>
+ </build>
+ </profile>
+ </profiles>
+</project>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser-res/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser-res/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser-res/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser-res/pom.xml Thu Nov 14 19:57:46 2013
@@ -24,7 +24,7 @@
<parent>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
+ <version>3.1.1</version>
</parent>
<artifactId>ctakes-constituency-parser-res</artifactId>
<name>Apache cTAKES Resources constituency-parser</name>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-constituency-parser/pom.xml Thu Nov 14 19:57:46 2013
@@ -1,76 +1,76 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-
- Licensed to the Apache Software Foundation (ASF) under one
- or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information
- regarding copyright ownership. The ASF licenses this file
- to you under the Apache License, Version 2.0 (the
- "License"); you may not use this file except in compliance
- with the License. You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing,
- software distributed under the License is distributed on an
- "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- KIND, either express or implied. See the License for the
- specific language governing permissions and limitations
- under the License.
-
--->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-constituency-parser</artifactId>
- <name>Apache cTAKES Constituency Parser</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
- </parent>
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-constituency-parser-res</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-type-system</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-utils</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.opennlp</groupId>
- <artifactId>opennlp-tools</artifactId>
- </dependency>
- <dependency>
- <groupId>log4j</groupId>
- <artifactId>log4j</artifactId>
- </dependency>
- <dependency>
- <groupId>jdom</groupId>
- <artifactId>jdom</artifactId>
- </dependency>
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- </dependency>
- </dependencies>
- <build>
- <plugins>
- <plugin>
- <groupId>org.cleartk</groupId>
- <artifactId>jcasgen-maven-plugin</artifactId>
- <configuration>
- <typeSystem>src/main/resources/org/apache/ctakes/constituency/parser/types/LabeledTree.xml</typeSystem>
- </configuration>
- </plugin>
- </plugins>
- </build>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+ Licensed to the Apache Software Foundation (ASF) under one
+ or more contributor license agreements. See the NOTICE file
+ distributed with this work for additional information
+ regarding copyright ownership. The ASF licenses this file
+ to you under the Apache License, Version 2.0 (the
+ "License"); you may not use this file except in compliance
+ with the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing,
+ software distributed under the License is distributed on an
+ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ KIND, either express or implied. See the License for the
+ specific language governing permissions and limitations
+ under the License.
+
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-constituency-parser</artifactId>
+ <name>Apache cTAKES Constituency Parser</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.1</version>
+ </parent>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-constituency-parser-res</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-type-system</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-utils</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.opennlp</groupId>
+ <artifactId>opennlp-tools</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>log4j</groupId>
+ <artifactId>log4j</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>jdom</groupId>
+ <artifactId>jdom</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ </dependency>
+ </dependencies>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.cleartk</groupId>
+ <artifactId>jcasgen-maven-plugin</artifactId>
+ <configuration>
+ <typeSystem>src/main/resources/org/apache/ctakes/constituency/parser/types/LabeledTree.xml</typeSystem>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+</project>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-context-tokenizer/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-context-tokenizer/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-context-tokenizer/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-context-tokenizer/pom.xml Thu Nov 14 19:57:46 2013
@@ -1,54 +1,54 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-
- Licensed to the Apache Software Foundation (ASF) under one
- or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information
- regarding copyright ownership. The ASF licenses this file
- to you under the Apache License, Version 2.0 (the
- "License"); you may not use this file except in compliance
- with the License. You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing,
- software distributed under the License is distributed on an
- "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- KIND, either express or implied. See the License for the
- specific language governing permissions and limitations
- under the License.
-
--->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-context-tokenizer</artifactId>
- <name>Apache cTAKES context dependent tokenizer</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
- </parent>
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-type-system</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-utils</artifactId>
- </dependency>
- <dependency>
- <groupId>log4j</groupId>
- <artifactId>log4j</artifactId>
- </dependency>
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- <scope>test</scope>
- </dependency>
- </dependencies>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+ Licensed to the Apache Software Foundation (ASF) under one
+ or more contributor license agreements. See the NOTICE file
+ distributed with this work for additional information
+ regarding copyright ownership. The ASF licenses this file
+ to you under the Apache License, Version 2.0 (the
+ "License"); you may not use this file except in compliance
+ with the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing,
+ software distributed under the License is distributed on an
+ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ KIND, either express or implied. See the License for the
+ specific language governing permissions and limitations
+ under the License.
+
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-context-tokenizer</artifactId>
+ <name>Apache cTAKES context dependent tokenizer</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.1</version>
+ </parent>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-type-system</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-utils</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>log4j</groupId>
+ <artifactId>log4j</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ <scope>test</scope>
+ </dependency>
+ </dependencies>
+</project>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-core-res/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-core-res/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-core-res/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-core-res/pom.xml Thu Nov 14 19:57:46 2013
@@ -24,7 +24,7 @@
<parent>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
+ <version>3.1.1</version>
</parent>
<artifactId>ctakes-core-res</artifactId>
<name>Apache cTAKES Resources core</name>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-core/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-core/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-core/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-core/pom.xml Thu Nov 14 19:57:46 2013
@@ -1,104 +1,104 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-
- Licensed to the Apache Software Foundation (ASF) under one
- or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information
- regarding copyright ownership. The ASF licenses this file
- to you under the Apache License, Version 2.0 (the
- "License"); you may not use this file except in compliance
- with the License. You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing,
- software distributed under the License is distributed on an
- "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- KIND, either express or implied. See the License for the
- specific language governing permissions and limitations
- under the License.
-
--->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-core</artifactId>
- <name>Apache cTAKES core</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
- </parent>
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core-res</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-type-system</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-utils</artifactId>
- </dependency>
- <dependency>
- <groupId>org.uimafit</groupId>
- <artifactId>uimafit</artifactId>
- </dependency>
- <dependency>
- <!-- needed for uimafit, but excluded in parent pom -->
- <groupId>commons-io</groupId>
- <artifactId>commons-io</artifactId>
- </dependency>
- <dependency>
- <groupId>jdom</groupId>
- <artifactId>jdom</artifactId>
- </dependency>
- <dependency>
- <groupId>org.jdom</groupId>
- <artifactId>jdom2</artifactId>
- </dependency>
- <dependency>
- <groupId>com.google.guava</groupId>
- <artifactId>guava</artifactId>
- </dependency>
- <dependency>
- <groupId>log4j</groupId>
- <artifactId>log4j</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.opennlp</groupId>
- <artifactId>opennlp-maxent</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.opennlp</groupId>
- <artifactId>opennlp-tools</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.lucene</groupId>
- <artifactId>lucene-core</artifactId>
- </dependency>
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- </dependency>
- <dependency>
- <groupId>edu.mit.findstruct</groupId>
- <artifactId>findstructapi</artifactId>
- </dependency>
- <dependency>
- <groupId>com.googlecode.armbrust-file-utils</groupId>
- <artifactId>sqlwrapper</artifactId>
- </dependency>
- <dependency>
- <groupId>net.sourceforge.openai</groupId>
- <artifactId>openaifsm</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.uima</groupId>
- <artifactId>uimaj-examples</artifactId> <!-- for XCasWriterCasConsumer -->
- </dependency>
-
-
- </dependencies>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+ Licensed to the Apache Software Foundation (ASF) under one
+ or more contributor license agreements. See the NOTICE file
+ distributed with this work for additional information
+ regarding copyright ownership. The ASF licenses this file
+ to you under the Apache License, Version 2.0 (the
+ "License"); you may not use this file except in compliance
+ with the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing,
+ software distributed under the License is distributed on an
+ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ KIND, either express or implied. See the License for the
+ specific language governing permissions and limitations
+ under the License.
+
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-core</artifactId>
+ <name>Apache cTAKES core</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.1</version>
+ </parent>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core-res</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-type-system</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-utils</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.uimafit</groupId>
+ <artifactId>uimafit</artifactId>
+ </dependency>
+ <dependency>
+ <!-- needed for uimafit, but excluded in parent pom -->
+ <groupId>commons-io</groupId>
+ <artifactId>commons-io</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>jdom</groupId>
+ <artifactId>jdom</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.jdom</groupId>
+ <artifactId>jdom2</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>com.google.guava</groupId>
+ <artifactId>guava</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>log4j</groupId>
+ <artifactId>log4j</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.opennlp</groupId>
+ <artifactId>opennlp-maxent</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.opennlp</groupId>
+ <artifactId>opennlp-tools</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.lucene</groupId>
+ <artifactId>lucene-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>edu.mit.findstruct</groupId>
+ <artifactId>findstructapi</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>com.googlecode.armbrust-file-utils</groupId>
+ <artifactId>sqlwrapper</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>net.sourceforge.openai</groupId>
+ <artifactId>openaifsm</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.uima</groupId>
+ <artifactId>uimaj-examples</artifactId> <!-- for XCasWriterCasConsumer -->
+ </dependency>
+
+
+ </dependencies>
+</project>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-coreference-res/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-coreference-res/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-coreference-res/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-coreference-res/pom.xml Thu Nov 14 19:57:46 2013
@@ -24,7 +24,7 @@
<parent>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
+ <version>3.1.1</version>
</parent>
<artifactId>ctakes-coreference-res</artifactId>
<name>Apache cTAKES Resources coreference</name>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-coreference/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-coreference/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-coreference/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-coreference/pom.xml Thu Nov 14 19:57:46 2013
@@ -1,94 +1,94 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-
- Licensed to the Apache Software Foundation (ASF) under one
- or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information
- regarding copyright ownership. The ASF licenses this file
- to you under the Apache License, Version 2.0 (the
- "License"); you may not use this file except in compliance
- with the License. You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing,
- software distributed under the License is distributed on an
- "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- KIND, either express or implied. See the License for the
- specific language governing permissions and limitations
- under the License.
-
--->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-coreference</artifactId>
- <name>Apache cTAKES CoReference Resolver</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
- </parent>
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-coreference-res</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-type-system</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-utils</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-constituency-parser</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.opennlp</groupId>
- <artifactId>opennlp-tools</artifactId>
- </dependency>
- <dependency>
- <groupId>log4j</groupId>
- <artifactId>log4j</artifactId>
- </dependency>
- <dependency>
- <groupId>jdom</groupId>
- <artifactId>jdom</artifactId>
- </dependency>
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-relation-extractor</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-dictionary-lookup</artifactId>
- </dependency>
- <dependency>
- <groupId>net.sourceforge.ctakesresources</groupId>
- <artifactId>ctakes-resources-umls2011ab</artifactId>
- <version>3.1.1</version>
- </dependency>
- </dependencies>
-
- <build>
- <plugins>
- <plugin>
- <groupId>org.cleartk</groupId>
- <artifactId>jcasgen-maven-plugin</artifactId>
- <configuration>
- <typeSystem>src/main/resources/org/apache/ctakes/coreference/types/TypeSystem.xml</typeSystem>
- </configuration>
- </plugin>
- </plugins>
- </build>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+ Licensed to the Apache Software Foundation (ASF) under one
+ or more contributor license agreements. See the NOTICE file
+ distributed with this work for additional information
+ regarding copyright ownership. The ASF licenses this file
+ to you under the Apache License, Version 2.0 (the
+ "License"); you may not use this file except in compliance
+ with the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing,
+ software distributed under the License is distributed on an
+ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ KIND, either express or implied. See the License for the
+ specific language governing permissions and limitations
+ under the License.
+
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-coreference</artifactId>
+ <name>Apache cTAKES CoReference Resolver</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.1</version>
+ </parent>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-coreference-res</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-type-system</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-utils</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-constituency-parser</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.opennlp</groupId>
+ <artifactId>opennlp-tools</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>log4j</groupId>
+ <artifactId>log4j</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>jdom</groupId>
+ <artifactId>jdom</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-relation-extractor</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dictionary-lookup</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>net.sourceforge.ctakesresources</groupId>
+ <artifactId>ctakes-resources-umls2011ab</artifactId>
+ <version>3.1.1</version>
+ </dependency>
+ </dependencies>
+
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.cleartk</groupId>
+ <artifactId>jcasgen-maven-plugin</artifactId>
+ <configuration>
+ <typeSystem>src/main/resources/org/apache/ctakes/coreference/types/TypeSystem.xml</typeSystem>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+</project>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser-res/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser-res/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser-res/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser-res/pom.xml Thu Nov 14 19:57:46 2013
@@ -24,7 +24,7 @@
<parent>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
+ <version>3.1.1</version>
</parent>
<artifactId>ctakes-dependency-parser-res</artifactId>
<name>Apache cTAKES Resources dependency-parser</name>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-dependency-parser/pom.xml Thu Nov 14 19:57:46 2013
@@ -1,94 +1,94 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-
- Licensed to the Apache Software Foundation (ASF) under one
- or more contributor license agreements. See the NOTICE file
- distributed with this work for additional information
- regarding copyright ownership. The ASF licenses this file
- to you under the Apache License, Version 2.0 (the
- "License"); you may not use this file except in compliance
- with the License. You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing,
- software distributed under the License is distributed on an
- "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- KIND, either express or implied. See the License for the
- specific language governing permissions and limitations
- under the License.
-
--->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-dependency-parser</artifactId>
- <name>Apache cTAKES Dependency Parser</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
- </parent>
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-dependency-parser-res</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-type-system</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-lvg</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-pos-tagger</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-utils</artifactId>
- </dependency>
- <dependency>
- <groupId>com.googlecode.clearnlp</groupId>
- <artifactId>clearnlp</artifactId>
- </dependency>
- <dependency>
- <groupId>args4j</groupId>
- <artifactId>args4j</artifactId>
- </dependency>
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- </dependency>
- <dependency>
- <groupId>org.cleartk</groupId>
- <artifactId>cleartk-util</artifactId>
- </dependency>
- <dependency>
- <groupId>org.uimafit</groupId>
- <artifactId>uimafit</artifactId>
- </dependency>
- <dependency>
- <groupId>com.carrotsearch</groupId>
- <artifactId>hppc</artifactId>
- </dependency>
- <dependency>
- <groupId>commons-io</groupId>
- <artifactId>commons-io</artifactId>
- </dependency>
- <dependency>
- <groupId>commons-lang</groupId>
- <artifactId>commons-lang</artifactId>
- </dependency>
- <dependency>
- <groupId>commons-logging</groupId>
- <artifactId>commons-logging</artifactId>
- </dependency>
- </dependencies>
- <description>This wraps the ClearNLP dependency parser and semantic role labeler into a UIMA friendly annotator</description>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+ Licensed to the Apache Software Foundation (ASF) under one
+ or more contributor license agreements. See the NOTICE file
+ distributed with this work for additional information
+ regarding copyright ownership. The ASF licenses this file
+ to you under the Apache License, Version 2.0 (the
+ "License"); you may not use this file except in compliance
+ with the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing,
+ software distributed under the License is distributed on an
+ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ KIND, either express or implied. See the License for the
+ specific language governing permissions and limitations
+ under the License.
+
+-->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-dependency-parser</artifactId>
+ <name>Apache cTAKES Dependency Parser</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.1</version>
+ </parent>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dependency-parser-res</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-type-system</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-lvg</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-pos-tagger</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-utils</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>com.googlecode.clearnlp</groupId>
+ <artifactId>clearnlp</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>args4j</groupId>
+ <artifactId>args4j</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.cleartk</groupId>
+ <artifactId>cleartk-util</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.uimafit</groupId>
+ <artifactId>uimafit</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>com.carrotsearch</groupId>
+ <artifactId>hppc</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>commons-io</groupId>
+ <artifactId>commons-io</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>commons-lang</groupId>
+ <artifactId>commons-lang</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>commons-logging</groupId>
+ <artifactId>commons-logging</artifactId>
+ </dependency>
+ </dependencies>
+ <description>This wraps the ClearNLP dependency parser and semantic role labeler into a UIMA friendly annotator</description>
+</project>
Modified: ctakes/branches/ctakes-3.1.1/ctakes-dictionary-lookup-res/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.1/ctakes-dictionary-lookup-res/pom.xml?rev=1542043&r1=1542042&r2=1542043&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.1/ctakes-dictionary-lookup-res/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.1/ctakes-dictionary-lookup-res/pom.xml Thu Nov 14 19:57:46 2013
@@ -24,7 +24,7 @@
<parent>
<groupId>org.apache.ctakes</groupId>
<artifactId>ctakes</artifactId>
- <version>3.2.0-SNAPSHOT</version>
+ <version>3.1.1</version>
</parent>
<artifactId>ctakes-dictionary-lookup-res</artifactId>
<name>Apache cTAKES Resources dictionary-lookup</name>