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Posted to user@spark.apache.org by SparkUser6 <al...@gmail.com> on 2018/05/06 01:40:01 UTC
Unable to Connect to Apache Phoenix From Spark
Simple Java Program to Connect to Phoenix DB:
SparkConf sparkConf = new SparkConf();
sparkConf.setAppName("Using-spark-phoenix-df");
sparkConf.setMaster("local[*]");
JavaSparkContext sc = new JavaSparkContext(sparkConf);
SQLContext sqlContext = new org.apache.spark.sql.SQLContext(sc);
Dataset<Row> fromPhx = sqlContext
.read()
.format("jdbc")
.options(
ImmutableMap.of("driver",
"org.apache.phoenix.jdbc.PhoenixDriver", "url",
"jdbc:phoenix:ZOOKEEPER_QUORUM_URL:/hbase",
"dbtable", "STOCK")).load();
System.out.println(fromPhx.toJavaRDD().count());
spark-submit --class PhoenixToDataFrame \
--master yarn-client --deploy-mode client --executor-memory 1g \
--files /etc/hbase/conf/hbase-site.xml \
--name hbasespark --conf
"spark.executor.extraClassPath=/usr/lib/phoenix/phoenix-spark-4.13.0-HBase-1.4.jar:/usr/lib/phoenix/phoenix-core-4.13.0-HBase-1.4.jar:/usr/lib/phoenix-4.13.0-HBase-1.4-client.jar:/usr/lib/phoenix-client.jar:/usr/lib/phoenix-server.jar"
hbaseandspark-0.0.1-SNAPSHOT-jar-with-dependencies.jar
ERROR:
18/05/06 01:25:06 INFO Utils: Successfully started service 'sparkDriver' on
port 34053.
18/05/06 01:25:06 INFO SparkEnv: Registering MapOutputTracker
18/05/06 01:25:06 INFO SparkEnv: Registering BlockManagerMaster
18/05/06 01:25:06 INFO BlockManagerMasterEndpoint: Using
org.apache.spark.storage.DefaultTopologyMapper for getting topology
information
18/05/06 01:25:06 INFO BlockManagerMasterEndpoint:
BlockManagerMasterEndpoint up
18/05/06 01:25:06 INFO DiskBlockManager: Created local directory at
/mnt/tmp/blockmgr-08e5b083-e2bb-4389-8b30-29a1be08ee7e
18/05/06 01:25:06 INFO MemoryStore: MemoryStore started with capacity 414.4
MB
18/05/06 01:25:07 INFO SparkEnv: Registering OutputCommitCoordinator
18/05/06 01:25:07 INFO Utils: Successfully started service 'SparkUI' on port
4040.
18/05/06 01:25:07 INFO SparkUI: Bound SparkUI to 0.0.0.0, and started at
http://10.16.129.152:4040
18/05/06 01:25:07 INFO SparkContext: Added JAR
file:/home/ec2-user/test/target/hbaseandspark-0.0.1-SNAPSHOT-jar-with-dependencies.jar
at
spark://10.16.129.152:34053/jars/hbaseandspark-0.0.1-SNAPSHOT-jar-with-dependencies.jar
with timestamp 1525569907456
18/05/06 01:25:07 INFO Executor: Starting executor ID driver on host
localhost
18/05/06 01:25:07 INFO Utils: Successfully started service
'org.apache.spark.network.netty.NettyBlockTransferService' on port 34659.
18/05/06 01:25:07 INFO NettyBlockTransferService: Server created on
10.16.129.152:34659
18/05/06 01:25:07 INFO BlockManager: Using
org.apache.spark.storage.RandomBlockReplicationPolicy for block replication
policy
18/05/06 01:25:07 INFO BlockManagerMaster: Registering BlockManager
BlockManagerId(driver, 10.16.129.152, 34659, None)
18/05/06 01:25:07 INFO BlockManagerMasterEndpoint: Registering block manager
10.16.129.152:34659 with 414.4 MB RAM, BlockManagerId(driver, 10.16.129.152,
34659, None)
18/05/06 01:25:07 INFO BlockManagerMaster: Registered BlockManager
BlockManagerId(driver, 10.16.129.152, 34659, None)
18/05/06 01:25:07 INFO BlockManager: external shuffle service port = 7337
18/05/06 01:25:07 INFO BlockManager: Initialized BlockManager:
BlockManagerId(driver, 10.16.129.152, 34659, None)
18/05/06 01:25:09 INFO EventLoggingListener: Logging events to
hdfs:///var/log/spark/apps/local-1525569907548
18/05/06 01:25:09 INFO SharedState: loading hive config file:
file:/etc/spark/conf.dist/hive-site.xml
18/05/06 01:25:09 INFO SharedState: Setting hive.metastore.warehouse.dir
('null') to the value of spark.sql.warehouse.dir
('hdfs:///user/spark/warehouse').
18/05/06 01:25:09 INFO SharedState: Warehouse path is
'hdfs:///user/spark/warehouse'.
18/05/06 01:25:11 INFO StateStoreCoordinatorRef: Registered
StateStoreCoordinator endpoint
18/05/06 01:25:12 INFO ConnectionQueryServicesImpl: An instance of
ConnectionQueryServices was created.
18/05/06 01:25:12 WARN RpcControllerFactory: Cannot load configured
"hbase.rpc.controllerfactory.class"
(org.apache.hadoop.hbase.ipc.controller.ClientRpcControllerFactory) from
hbase-site.xml, falling back to use default RpcControllerFactory
18/05/06 01:25:12 INFO RecoverableZooKeeper: Process
identifier=hconnection-0x50110971 connecting to ZooKeeper
ensemble=ZOOKEEPER_QUORUM_URL:2181
18/05/06 01:25:13 INFO MetricsConfig: loaded properties from
hadoop-metrics2.properties
18/05/06 01:25:13 INFO MetricsSystemImpl: Scheduled Metric snapshot period
at 300 second(s).
18/05/06 01:25:13 INFO MetricsSystemImpl: HBase metrics system started
18/05/06 01:25:13 INFO MetricRegistries: Loaded MetricRegistries class
org.apache.hadoop.hbase.metrics.impl.MetricRegistriesImpl
Exception in thread "main" java.sql.SQLException: ERROR 103 (08004): Unable
to establish connection.
at
org.apache.phoenix.exception.SQLExceptionCode$Factory$1.newException(SQLExceptionCode.java:488)
at
org.apache.phoenix.exception.SQLExceptionInfo.buildException(SQLExceptionInfo.java:150)
at
org.apache.phoenix.query.ConnectionQueryServicesImpl.openConnection(ConnectionQueryServicesImpl.java:417)
at
org.apache.phoenix.query.ConnectionQueryServicesImpl.access$400(ConnectionQueryServicesImpl.java:256)
at
org.apache.phoenix.query.ConnectionQueryServicesImpl$12.call(ConnectionQueryServicesImpl.java:2408)
at
org.apache.phoenix.query.ConnectionQueryServicesImpl$12.call(ConnectionQueryServicesImpl.java:2384)
at
org.apache.phoenix.util.PhoenixContextExecutor.call(PhoenixContextExecutor.java:76)
at
org.apache.phoenix.query.ConnectionQueryServicesImpl.init(ConnectionQueryServicesImpl.java:2384)
at
org.apache.phoenix.jdbc.PhoenixDriver.getConnectionQueryServices(PhoenixDriver.java:255)
at
org.apache.phoenix.jdbc.PhoenixEmbeddedDriver.createConnection(PhoenixEmbeddedDriver.java:150)
at org.apache.phoenix.jdbc.PhoenixDriver.connect(PhoenixDriver.java:221)
at
org.apache.spark.sql.execution.datasources.jdbc.DriverWrapper.connect(DriverWrapper.scala:45)
at
org.apache.spark.sql.execution.datasources.jdbc.JdbcUtils$$anonfun$createConnectionFactory$1.apply(JdbcUtils.scala:61)
at
org.apache.spark.sql.execution.datasources.jdbc.JdbcUtils$$anonfun$createConnectionFactory$1.apply(JdbcUtils.scala:52)
at
org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$.resolveTable(JDBCRDD.scala:58)
at
org.apache.spark.sql.execution.datasources.jdbc.JDBCRelation.<init>(JDBCRelation.scala:114)
at
org.apache.spark.sql.execution.datasources.jdbc.JdbcRelationProvider.createRelation(JdbcRelationProvider.scala:52)
at
org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:307)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:178)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:146)
at PhoenixToDataFrame.main(PhoenixToDataFrame.java:48)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:775)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:180)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:205)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:119)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.io.IOException: java.lang.reflect.InvocationTargetException
at
org.apache.hadoop.hbase.client.ConnectionFactory.createConnection(ConnectionFactory.java:240)
at
org.apache.hadoop.hbase.client.ConnectionManager.createConnection(ConnectionManager.java:439)
at
org.apache.hadoop.hbase.client.ConnectionManager.createConnectionInternal(ConnectionManager.java:348)
at
org.apache.hadoop.hbase.client.HConnectionManager.createConnection(HConnectionManager.java:144)
at
org.apache.phoenix.query.HConnectionFactory$HConnectionFactoryImpl.createConnection(HConnectionFactory.java:47)
at
org.apache.phoenix.query.ConnectionQueryServicesImpl.openConnection(ConnectionQueryServicesImpl.java:408)
... 27 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at
org.apache.hadoop.hbase.client.ConnectionFactory.createConnection(ConnectionFactory.java:238)
... 32 more
Caused by: java.lang.RuntimeException: Could not create interface
org.apache.hadoop.hbase.zookeeper.MetricsZooKeeperSource Is the hadoop
compatibility jar on the classpath?
at
org.apache.hadoop.hbase.CompatibilitySingletonFactory.getInstance(CompatibilitySingletonFactory.java:75)
at
org.apache.hadoop.hbase.zookeeper.MetricsZooKeeper.<init>(MetricsZooKeeper.java:38)
at
org.apache.hadoop.hbase.zookeeper.RecoverableZooKeeper.<init>(RecoverableZooKeeper.java:130)
at org.apache.hadoop.hbase.zookeeper.ZKUtil.connect(ZKUtil.java:143)
at
org.apache.hadoop.hbase.zookeeper.ZooKeeperWatcher.<init>(ZooKeeperWatcher.java:181)
at
org.apache.hadoop.hbase.zookeeper.ZooKeeperWatcher.<init>(ZooKeeperWatcher.java:155)
at
org.apache.hadoop.hbase.client.ZooKeeperKeepAliveConnection.<init>(ZooKeeperKeepAliveConnection.java:43)
at
org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.getKeepAliveZooKeeperWatcher(ConnectionManager.java:1737)
at
org.apache.hadoop.hbase.client.ZooKeeperRegistry.getClusterId(ZooKeeperRegistry.java:104)
at
org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.retrieveClusterId(ConnectionManager.java:945)
at
org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.<init>(ConnectionManager.java:721)
... 37 more
Caused by: java.util.ServiceConfigurationError:
org.apache.hadoop.hbase.zookeeper.MetricsZooKeeperSource: Provider
org.apache.hadoop.hbase.zookeeper.MetricsZooKeeperSourceImpl could not be
instantiated
at java.util.ServiceLoader.fail(ServiceLoader.java:232)
at java.util.ServiceLoader.access$100(ServiceLoader.java:185)
at java.util.ServiceLoader$LazyIterator.nextService(ServiceLoader.java:384)
at java.util.ServiceLoader$LazyIterator.next(ServiceLoader.java:404)
at java.util.ServiceLoader$1.next(ServiceLoader.java:480)
at
org.apache.hadoop.hbase.CompatibilitySingletonFactory.getInstance(CompatibilitySingletonFactory.java:59)
... 47 more
Caused by: java.lang.IllegalAccessError: tried to access class
org.apache.hadoop.metrics2.lib.MetricsInfoImpl from class
org.apache.hadoop.metrics2.lib.DynamicMetricsRegistry
at
org.apache.hadoop.metrics2.lib.DynamicMetricsRegistry.newGauge(DynamicMetricsRegistry.java:139)
at
org.apache.hadoop.hbase.zookeeper.MetricsZooKeeperSourceImpl.<init>(MetricsZooKeeperSourceImpl.java:59)
at
org.apache.hadoop.hbase.zookeeper.MetricsZooKeeperSourceImpl.<init>(MetricsZooKeeperSourceImpl.java:51)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at java.lang.Class.newInstance(Class.java:442)
at java.util.ServiceLoader$LazyIterator.nextService(ServiceLoader.java:380)
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