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Posted to builds@beam.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2019/08/12 14:31:20 UTC
Build failed in Jenkins:
beam_PostCommit_Python_Chicago_Taxi_Dataflow #17
See <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/17/display/redirect?page=changes>
Changes:
[lukasz.gajowy] [BEAM-4775] Ensure each JobInvocation test is run in isolation
[lukasz.gajowy] [BEAM-4775] Refactor SamzaRunner - separate pipeline result creation
[lukasz.gajowy] [BEAM-4775] Introduce PortablePipelineResult interface
[lukasz.gajowy] [BEAM-4775] Use PortablePipelineResult in all portable runners
[jiangkai] upgrade calcite to 1.20.0
[jiangkai] api changes in calcite 1.20.0
[lukasz.gajowy] [BEAM-4775] Allow reading portableMetrics from JobInvocation using grpc
[lukasz.gajowy] [BEAM-4775] Stash handle to pipeline result to query metrics later
[lukasz.gajowy] [BEAM-4775] Read portable metrics from grpc response in Python SDK
[lukasz.gajowy] [BEAM-4775] Return portable metrics from Flink runner
[lukasz.gajowy] [BEAM-7772] Remove Pkb from file-based IOIT jobs
[lukasz.gajowy] [BEAM-7772] Refactor: improve naming in the file
[lukasz.gajowy] [BEAM-7772] Refactor: autoformat for consistency (intelij rules applied)
------------------------------------------
Started by timer
[EnvInject] - Loading node environment variables.
Building remotely on apache-beam-jenkins-5 (beam) in workspace <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/>
No credentials specified
Wiping out workspace first.
Cloning the remote Git repository
Cloning repository https://github.com/apache/beam.git
> git init <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src> # timeout=10
Fetching upstream changes from https://github.com/apache/beam.git
> git --version # timeout=10
> git fetch --tags --progress https://github.com/apache/beam.git +refs/heads/*:refs/remotes/origin/*
> git config remote.origin.url https://github.com/apache/beam.git # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://github.com/apache/beam.git # timeout=10
Fetching upstream changes from https://github.com/apache/beam.git
> git fetch --tags --progress https://github.com/apache/beam.git +refs/heads/*:refs/remotes/origin/* +refs/pull/${ghprbPullId}/*:refs/remotes/origin/pr/${ghprbPullId}/*
> git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 26d56426b472e2ec21f027b7b53290b5618d7c6d (origin/master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 26d56426b472e2ec21f027b7b53290b5618d7c6d
Commit message: "Merge pull request #9311: [SQL] Upgrade to Calcite 1.20.0"
> git rev-list --no-walk a2b57e3b55a09d641cee8c3b796cc6971a008db0 # timeout=10
No emails were triggered.
[EnvInject] - Executing scripts and injecting environment variables after the SCM step.
[EnvInject] - Injecting as environment variables the properties content
SPARK_LOCAL_IP=127.0.0.1
[EnvInject] - Variables injected successfully.
[Gradle] - Launching build.
[src] $ <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/gradlew> -PgcsRoot=gs://temp-storage-for-perf-tests/chicago-taxi -Prunner=DataflowRunner :sdks:python:test-suites:dataflow:py2:dataflowChicagoTaxiExample
Starting a Gradle Daemon, 2 busy Daemons could not be reused, use --status for details
> Task :buildSrc:compileJava NO-SOURCE
> Task :buildSrc:compileGroovy FROM-CACHE
> Task :buildSrc:pluginDescriptors
> Task :buildSrc:processResources
> Task :buildSrc:classes
> Task :buildSrc:jar
> Task :buildSrc:assemble
> Task :buildSrc:spotlessGroovy
> Task :buildSrc:spotlessGroovyCheck
> Task :buildSrc:spotlessGroovyGradle
> Task :buildSrc:spotlessGroovyGradleCheck
> Task :buildSrc:spotlessCheck
> Task :buildSrc:pluginUnderTestMetadata
> Task :buildSrc:compileTestJava NO-SOURCE
> Task :buildSrc:compileTestGroovy NO-SOURCE
> Task :buildSrc:processTestResources NO-SOURCE
> Task :buildSrc:testClasses UP-TO-DATE
> Task :buildSrc:test NO-SOURCE
> Task :buildSrc:validateTaskProperties FROM-CACHE
> Task :buildSrc:check
> Task :buildSrc:build
Configuration on demand is an incubating feature.
> Task :sdks:python:setupVirtualenv
New python executable in <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/1922375555/bin/python2.7>
Also creating executable in <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/1922375555/bin/python>
Installing setuptools, pip, wheel...
done.
Running virtualenv with interpreter /usr/bin/python2.7
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Collecting tox==3.11.1
Using cached https://files.pythonhosted.org/packages/8b/38/71c2fe0c3915fc0e93bdd1bf8cd697be48cdacedbdcd438e0f0629c69024/tox-3.11.1-py2.py3-none-any.whl
Collecting grpcio-tools==1.3.5
Using cached https://files.pythonhosted.org/packages/05/f6/0296e29b1bac6f85d2a8556d48adf825307f73109a3c2c17fb734292db0a/grpcio_tools-1.3.5-cp27-cp27mu-manylinux1_x86_64.whl
Collecting six<2,>=1.0.0 (from tox==3.11.1)
Using cached https://files.pythonhosted.org/packages/73/fb/00a976f728d0d1fecfe898238ce23f502a721c0ac0ecfedb80e0d88c64e9/six-1.12.0-py2.py3-none-any.whl
Requirement already satisfied, skipping upgrade: setuptools>=30.0.0 in <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/1922375555/lib/python2.7/site-packages> (from tox==3.11.1) (41.0.1)
Collecting pluggy<1,>=0.3.0 (from tox==3.11.1)
Using cached https://files.pythonhosted.org/packages/06/ee/de89e0582276e3551df3110088bf20844de2b0e7df2748406876cc78e021/pluggy-0.12.0-py2.py3-none-any.whl
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Collecting virtualenv>=14.0.0 (from tox==3.11.1)
Using cached https://files.pythonhosted.org/packages/db/9e/df208b2baad146fe3fbe750eacadd6e49bcf2f2c3c1117b7192a7b28aec4/virtualenv-16.7.2-py2.py3-none-any.whl
Collecting py<2,>=1.4.17 (from tox==3.11.1)
Using cached https://files.pythonhosted.org/packages/76/bc/394ad449851729244a97857ee14d7cba61ddb268dce3db538ba2f2ba1f0f/py-1.8.0-py2.py3-none-any.whl
Collecting filelock<4,>=3.0.0 (from tox==3.11.1)
Collecting grpcio>=1.3.5 (from grpcio-tools==1.3.5)
> Task :sdks:python:test-suites:dataflow:py2:setupVirtualenv FAILED
New python executable in <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/bin/python2.7>
Also creating executable in <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/bin/python>
Installing setuptools, pip, wheel...
done.
Running virtualenv with interpreter /usr/bin/python2.7
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Collecting tox==3.11.1
Using cached https://files.pythonhosted.org/packages/8b/38/71c2fe0c3915fc0e93bdd1bf8cd697be48cdacedbdcd438e0f0629c69024/tox-3.11.1-py2.py3-none-any.whl
Collecting grpcio-tools==1.3.5
Using cached https://files.pythonhosted.org/packages/05/f6/0296e29b1bac6f85d2a8556d48adf825307f73109a3c2c17fb734292db0a/grpcio_tools-1.3.5-cp27-cp27mu-manylinux1_x86_64.whl
Collecting six<2,>=1.0.0 (from tox==3.11.1)
ERROR: Could not find a version that satisfies the requirement six<2,>=1.0.0 (from tox==3.11.1) (from versions: none)
ERROR: No matching distribution found for six<2,>=1.0.0 (from tox==3.11.1)
> Task :sdks:python:setupVirtualenv
Using cached https://files.pythonhosted.org/packages/a5/46/5d08b6e26748ed6f3b5e93d980ea5daa63c3a8200b2ad270645b0e2f9566/grpcio-1.22.0-cp27-cp27mu-manylinux1_x86_64.whl
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Collecting futures>=2.2.0; python_version < "3.2" (from grpcio>=1.3.5->grpcio-tools==1.3.5)
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Collecting enum34>=1.0.4; python_version < "3.4" (from grpcio>=1.3.5->grpcio-tools==1.3.5)
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Collecting contextlib2; python_version < "3" (from importlib-metadata>=0.12->pluggy<1,>=0.3.0->tox==3.11.1)
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Collecting configparser>=3.5; python_version < "3" (from importlib-metadata>=0.12->pluggy<1,>=0.3.0->tox==3.11.1)
Using cached https://files.pythonhosted.org/packages/ab/1a/ec151e5e703ac80041eaccef923611bbcec2b667c20383655a06962732e9/configparser-3.8.1-py2.py3-none-any.whl
Collecting scandir; python_version < "3.5" (from pathlib2; python_version == "3.4.*" or python_version < "3"->importlib-metadata>=0.12->pluggy<1,>=0.3.0->tox==3.11.1)
Installing collected packages: six, contextlib2, zipp, scandir, pathlib2, configparser, importlib-metadata, pluggy, toml, virtualenv, py, filelock, tox, futures, enum34, grpcio, protobuf, grpcio-tools
Successfully installed configparser-3.8.1 contextlib2-0.5.5 enum34-1.1.6 filelock-3.0.12 futures-3.3.0 grpcio-1.22.0 grpcio-tools-1.3.5 importlib-metadata-0.19 pathlib2-2.3.4 pluggy-0.12.0 protobuf-3.9.1 py-1.8.0 scandir-1.10.0 six-1.12.0 toml-0.10.0 tox-3.11.1 virtualenv-16.7.2 zipp-0.5.2
FAILURE: Build failed with an exception.
* What went wrong:
Execution failed for task ':sdks:python:test-suites:dataflow:py2:setupVirtualenv'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights.
* Get more help at https://help.gradle.org
Deprecated Gradle features were used in this build, making it incompatible with Gradle 6.0.
Use '--warning-mode all' to show the individual deprecation warnings.
See https://docs.gradle.org/5.2.1/userguide/command_line_interface.html#sec:command_line_warnings
BUILD FAILED in 21s
2 actionable tasks: 2 executed
Publishing build scan...
https://gradle.com/s/o4msl3pwejsma
Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure
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beam_PostCommit_Python_Chicago_Taxi_Dataflow #19
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/19/display/redirect?page=changes>
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Build failed in Jenkins:
beam_PostCommit_Python_Chicago_Taxi_Dataflow #18
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/18/display/redirect?page=changes>
Changes:
[echauchot] Add Nexmark talk (ApacheCon 2017) and Universal metrics talk (ApacheCon
[echauchot] Make it explicit that the link starts to play the audio podcast
[dcavazos] [BEAM-7389] Add code examples for Values page
[chadrik] Add JobService.GetJobs to the job API
[github] Fix: Make sure experiments list if modifiable
[chadrik] Fix python code style
[echauchot] Address review comments: nit
[iemejia] [BEAM-5822] Remove non vendored byte-buddy dependency from
[github] [BEAM-5148] Optionally load bson (#9308)
[iemejia] [BEAM-3608] Remove remaining unused non-vendored guava dependencies
[markliu] [BEAM-7940] Quick fix sdks:python:depSnapshot
[dcavazos] [BEAM-7389] Add outputs for Filter page examples
[dcavazos] [BEAM-7389] Add code examples for FlatMap page
[kedin] [SQL] Disable KafkaCSVTableIT
[github] Added Paris meetup into the list of meetups
------------------------------------------
[...truncated 88.68 KB...]
}
}
feature {
name: "dropoff_community_area"
value_count {
min: 1
max: 1
}
type: BYTES
int_domain {
}
presence {
min_count: 1
}
}
feature {
name: "pickup_community_area"
value_count {
min: 1
max: 1
}
type: BYTES
int_domain {
}
presence {
min_fraction: 1.0
min_count: 1
}
}
feature {
name: "payment_type"
value_count {
min: 1
max: 1
}
type: BYTES
domain: "payment_type"
presence {
min_fraction: 1.0
min_count: 1
}
}
feature {
name: "trip_seconds"
value_count {
min: 1
max: 1
}
type: INT
presence {
min_count: 1
}
}
feature {
name: "trip_start_day"
value_count {
min: 1
max: 1
}
type: INT
presence {
min_fraction: 1.0
min_count: 1
}
}
feature {
name: "tips"
value_count {
min: 1
max: 1
}
type: FLOAT
presence {
min_count: 1
}
}
feature {
name: "pickup_latitude"
value_count {
min: 1
max: 1
}
type: FLOAT
presence {
min_fraction: 1.0
min_count: 1
}
}
feature {
name: "dropoff_latitude"
value_count {
min: 1
max: 1
}
type: FLOAT
presence {
min_fraction: 1.0
min_count: 1
}
}
string_domain {
name: "payment_type"
value: "Cash"
value: "Credit Card"
value: "Pcard"
value: "Prcard"
}
}
anomaly_info {
key: "company"
value {
description: "New column (column in data but not in schema)"
severity: ERROR
short_description: "New column"
reason {
type: SCHEMA_NEW_COLUMN
short_description: "New column"
description: "New column (column in data but not in schema)"
}
path {
step: "company"
}
}
}
anomaly_info {
key: "payment_type"
value {
description: "Examples contain values missing from the schema: Dispute (<1%), Mobile (<1%), No Charge (<1%), Unknown (~1%). "
severity: ERROR
short_description: "Unexpected string values"
reason {
type: ENUM_TYPE_UNEXPECTED_STRING_VALUES
short_description: "Unexpected string values"
description: "Examples contain values missing from the schema: Dispute (<1%), Mobile (<1%), No Charge (<1%), Unknown (~1%). "
}
path {
step: "payment_type"
}
}
}
anomaly_info {
key: "pickup_community_area"
value {
description: "The feature was present in fewer examples than expected."
severity: ERROR
short_description: "Column dropped"
reason {
type: FEATURE_TYPE_LOW_FRACTION_PRESENT
short_description: "Column dropped"
description: "The feature was present in fewer examples than expected."
}
path {
step: "pickup_community_area"
}
}
}
anomaly_info {
key: "trip_miles"
value {
description: "The feature was present in fewer examples than expected."
severity: ERROR
short_description: "Column dropped"
reason {
type: FEATURE_TYPE_LOW_FRACTION_PRESENT
short_description: "Column dropped"
description: "The feature was present in fewer examples than expected."
}
path {
step: "trip_miles"
}
}
}
anomaly_name_format: SERIALIZED_PATH
Writing anomalies to anomalies path.
Preprocessing train data...
WARNING: Logging before flag parsing goes to stderr.
W0813 14:53:16.696741 140286944798464 deprecation_wrapper.py:119] From <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/local/lib/python2.7/site-packages/tensorflow_transform/beam/common.py>:51: The name tf.ConfigProto is deprecated. Please use tf.compat.v1.ConfigProto instead.
W0813 14:53:16.706922 140286944798464 deprecation_wrapper.py:119] From <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/local/lib/python2.7/site-packages/tensorflow_transform/beam/impl.py>:283: The name tf.SparseTensorValue is deprecated. Please use tf.compat.v1.SparseTensorValue instead.
W0813 14:53:16.761456 140286944798464 deprecation_wrapper.py:119] From preprocess.py:187: The name tf.logging.set_verbosity is deprecated. Please use tf.compat.v1.logging.set_verbosity instead.
W0813 14:53:16.761817 140286944798464 deprecation_wrapper.py:119] From preprocess.py:187: The name tf.logging.INFO is deprecated. Please use tf.compat.v1.logging.INFO instead.
W0813 14:53:17.103842 140286944798464 deprecation_wrapper.py:119] From <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/local/lib/python2.7/site-packages/tensorflow_transform/tf_metadata/schema_utils.py>:313: The name tf.VarLenFeature is deprecated. Please use tf.io.VarLenFeature instead.
W0813 14:53:17.104461 140286944798464 deprecation_wrapper.py:119] From <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/local/lib/python2.7/site-packages/tensorflow_transform/tf_metadata/schema_utils.py>:63: The name tf.SparseFeature is deprecated. Please use tf.io.SparseFeature instead.
W0813 14:53:17.104603 140286944798464 deprecation_wrapper.py:119] From <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/local/lib/python2.7/site-packages/tensorflow_transform/tf_metadata/schema_utils.py>:110: The name tf.FixedLenFeature is deprecated. Please use tf.io.FixedLenFeature instead.
W0813 14:53:17.228564 140286944798464 deprecation.py:323] From <https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/local/lib/python2.7/site-packages/tensorflow_transform/mappers.py>:207: where (from tensorflow.python.ops.array_ops) is deprecated and will be removed in a future version.
Instructions for updating:
Use tf.where in 2.0, which has the same broadcast rule as np.where
Traceback (most recent call last):
File "preprocess.py", line 258, in <module>
main()
File "preprocess.py", line 253, in main
project=known_args.metric_reporting_project
File "preprocess.py", line 154, in transform_data
('Analyze' >> tft_beam.AnalyzeDataset(preprocessing_fn)))
File "<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/sdks/python/apache_beam/transforms/ptransform.py",> line 905, in __ror__
return self.transform.__ror__(pvalueish, self.label)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/sdks/python/apache_beam/transforms/ptransform.py",> line 514, in __ror__
result = p.apply(self, pvalueish, label)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/sdks/python/apache_beam/pipeline.py",> line 480, in apply
return self.apply(transform, pvalueish)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/sdks/python/apache_beam/pipeline.py",> line 516, in apply
pvalueish_result = self.runner.apply(transform, pvalueish, self._options)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/sdks/python/apache_beam/runners/runner.py",> line 175, in apply
return m(transform, input, options)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/sdks/python/apache_beam/runners/runner.py",> line 181, in apply_PTransform
return transform.expand(input)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/local/lib/python2.7/site-packages/tensorflow_transform/beam/impl.py",> line 825, in expand
input_metadata))
File "<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/build/gradleenv/-194514014/local/lib/python2.7/site-packages/tensorflow_transform/beam/impl.py",> line 716, in expand
output_signature = self._preprocessing_fn(copied_inputs)
File "preprocess.py", line 102, in preprocessing_fn
_fill_in_missing(inputs[key]),
KeyError: 'company'
> Task :sdks:python:test-suites:dataflow:py2:dataflowChicagoTaxiExample FAILED
FAILURE: Build failed with an exception.
* Where:
Build file '<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Dataflow/ws/src/sdks/python/test-suites/dataflow/py2/build.gradle'> line: 137
* What went wrong:
Execution failed for task ':sdks:python:test-suites:dataflow:py2:dataflowChicagoTaxiExample'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights.
* Get more help at https://help.gradle.org
Deprecated Gradle features were used in this build, making it incompatible with Gradle 6.0.
Use '--warning-mode all' to show the individual deprecation warnings.
See https://docs.gradle.org/5.2.1/userguide/command_line_interface.html#sec:command_line_warnings
BUILD FAILED in 26m 56s
5 actionable tasks: 5 executed
Publishing build scan...
https://gradle.com/s/mql6p3wias3uy
Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure
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