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Posted to issues@beam.apache.org by "H. Joe Lee (Jira)" <ji...@apache.org> on 2019/11/07 14:50:00 UTC

[jira] [Commented] (BEAM-3850) I/O transform for HDH5 files with extension H5

    [ https://issues.apache.org/jira/browse/BEAM-3850?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16969316#comment-16969316 ] 

H. Joe Lee commented on BEAM-3850:
----------------------------------

I'd like to work on this issue. How can I start contributing?

> I/O transform for HDH5 files with extension H5
> ----------------------------------------------
>
>                 Key: BEAM-3850
>                 URL: https://issues.apache.org/jira/browse/BEAM-3850
>             Project: Beam
>          Issue Type: New Feature
>          Components: io-ideas, sdk-py-core
>         Environment: Python (could be Java) if it does not work
>            Reporter: Eila Arich-Landkof
>            Priority: Major
>
> Following the great summit today, I would like to ask for I/O transform for H5 file in python. If impossible, Java will work as well.
> The HDF5 group is very accessible: [https://support.hdfgroup.org/HDF5/]
> Example for H5 file can be found @ Mount Sinai Maayan lab: [https://amp.pharm.mssm.edu/archs4/download.html]
> I am using it as part of Oriel Research genomic and clinical processing workflow.
> I am available for any question.
>  



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