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Posted to common-issues@hadoop.apache.org by GitBox <gi...@apache.org> on 2022/08/14 13:17:36 UTC

[GitHub] [hadoop] Samrat002 opened a new pull request, #4742: YARN-11196. WIP NUMA support in DCE

Samrat002 opened a new pull request, #4742:
URL: https://github.com/apache/hadoop/pull/4742

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   ### Description of PR
   [YARN-11196](https://issues.apache.org/jira/browse/YARN-11196)
   
   ### How was this patch tested?
   
   
   ### For code changes:
   
   - [ ] Does the title or this PR starts with the corresponding JIRA issue id (e.g. 'HADOOP-17799. Your PR title ...')?
   - [ ] Object storage: have the integration tests been executed and the endpoint declared according to the connector-specific documentation?
   - [ ] If adding new dependencies to the code, are these dependencies licensed in a way that is compatible for inclusion under [ASF 2.0](http://www.apache.org/legal/resolved.html#category-a)?
   - [ ] If applicable, have you updated the `LICENSE`, `LICENSE-binary`, `NOTICE-binary` files?
   
   


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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r948694728


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -364,33 +376,68 @@ public int relaunchContainer(ContainerStartContext ctx)
    * Create a new {@link ShellCommandExecutor} using the parameters.
    *
    * @param wrapperScriptPath the path to the script to execute
-   * @param containerIdStr the container ID
+   * @param container the container reference
    * @param user the application owner's username
    * @param pidFile the path to the container's PID file
-   * @param resource this parameter controls memory and CPU limits.
    * @param workDir If not-null, specifies the directory which should be set
    * as the current working directory for the command. If null,
    * the current working directory is not modified.
-   * @param environment the container environment
    * @return the new {@link ShellCommandExecutor}
    * @see ShellCommandExecutor
    */
   protected CommandExecutor buildCommandExecutor(String wrapperScriptPath, 
-      String containerIdStr, String user, Path pidFile, Resource resource,
-      File workDir, Map<String, String> environment) {
-    
+      Container container, String user, Path pidFile, File workDir) {
+
+    String containerIdStr = container.getContainerId().toString();
+    Resource resource = container.getResource();
     String[] command = getRunCommand(wrapperScriptPath,
         containerIdStr, user, pidFile, this.getConf(), resource);
 
+    if(numaAwarenessEnabled(this.getConf())) {
+      try {
+        numaResourceAllocator.init(this.getConf());
+        command = addNumaCommands(command, container);
+      } catch (YarnException e) {
+        LOG.warn("Exception :- ", e);
+        LOG.warn("Initializing container without NUMA.");
+      }
+    }
     LOG.info("launchContainer: {}", Arrays.toString(command));
     return new ShellCommandExecutor(
         command,
         workDir,
-        environment,
+            container.getLaunchContext().getEnvironment(),
         0L,
         false);
   }
 
+  String[] addNumaCommands(String[] commands, Container container){
+    try {
+      NumaResourceAllocation numaAllocation = numaResourceAllocator.allocateNumaNodes(container);

Review Comment:
   Launch Container has to release the NUMA Resources at finally.



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[GitHub] [hadoop] Samrat002 commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
Samrat002 commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1221384343

   @PrabhuJoseph Thank you for reviewing the pr and providing with valuable comments.
   I have updated the patch and added unit tests for the same! 


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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. WIP NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1214425326

   :broken_heart: **-1 overall**
   
   
   
   
   
   
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   |||| _ Prechecks _ |
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   |||| _ Other Tests _ |
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   |  |   | 124m 17s |  |  |
   
   
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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r948684444


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -364,33 +376,68 @@ public int relaunchContainer(ContainerStartContext ctx)
    * Create a new {@link ShellCommandExecutor} using the parameters.
    *
    * @param wrapperScriptPath the path to the script to execute
-   * @param containerIdStr the container ID
+   * @param container the container reference
    * @param user the application owner's username
    * @param pidFile the path to the container's PID file
-   * @param resource this parameter controls memory and CPU limits.
    * @param workDir If not-null, specifies the directory which should be set
    * as the current working directory for the command. If null,
    * the current working directory is not modified.
-   * @param environment the container environment
    * @return the new {@link ShellCommandExecutor}
    * @see ShellCommandExecutor
    */
   protected CommandExecutor buildCommandExecutor(String wrapperScriptPath, 
-      String containerIdStr, String user, Path pidFile, Resource resource,
-      File workDir, Map<String, String> environment) {
-    
+      Container container, String user, Path pidFile, File workDir) {
+
+    String containerIdStr = container.getContainerId().toString();
+    Resource resource = container.getResource();
     String[] command = getRunCommand(wrapperScriptPath,
         containerIdStr, user, pidFile, this.getConf(), resource);
 
+    if(numaAwarenessEnabled(this.getConf())) {
+      try {
+        numaResourceAllocator.init(this.getConf());
+        command = addNumaCommands(command, container);
+      } catch (YarnException e) {
+        LOG.warn("Exception :- ", e);
+        LOG.warn("Initializing container without NUMA.");
+      }
+    }
     LOG.info("launchContainer: {}", Arrays.toString(command));
     return new ShellCommandExecutor(
         command,
         workDir,
-        environment,
+            container.getLaunchContext().getEnvironment(),
         0L,
         false);
   }
 
+  String[] addNumaCommands(String[] commands, Container container){
+    try {
+      NumaResourceAllocation numaAllocation = numaResourceAllocator.allocateNumaNodes(container);

Review Comment:
   The allocateNumaNodes call look better if called from launchContainer instead of buildCommandExecutor.



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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1225589943

   :confetti_ball: **+1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1219425992

   :confetti_ball: **+1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r954562550


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/test/java/org/apache/hadoop/yarn/server/nodemanager/TestDefaultContainerExecutor.java:
##########
@@ -736,4 +755,197 @@ public void testPickDirectory() throws Exception {
 //        new FsPermission(ApplicationLocalizer.LOGDIR_PERM), true);
 //  }
 
+  @Before
+  public void setUp() throws IOException, YarnException {
+    yarnConfiguration = new YarnConfiguration();
+    setNumaConfig();
+    Context mockContext = createAndGetMockContext();
+    NMStateStoreService nmStateStoreService =
+            mock(NMStateStoreService.class);
+    when(mockContext.getNMStateStore()).thenReturn(nmStateStoreService);
+    numaResourceAllocator = new NumaResourceAllocator(mockContext) {
+      @Override
+      public String executeNGetCmdOutput(Configuration config)
+              throws YarnRuntimeException {
+        return getNumaCmdOutput();
+      }
+    };
+
+    numaResourceAllocator.init(yarnConfiguration);
+    FileContext lfs = FileContext.getLocalFSFileContext();
+    containerExecutor = new DefaultContainerExecutor(lfs) {
+      @Override
+      public Configuration getConf() {
+        return yarnConfiguration;
+      }
+    };
+    containerExecutor.setNumaResourceAllocator(numaResourceAllocator);
+    mockContainer = mock(Container.class);
+  }
+
+  private void setNumaConfig() {
+    yarnConfiguration.set(YarnConfiguration.NM_NUMA_AWARENESS_ENABLED, "true");
+    yarnConfiguration.set(YarnConfiguration.NM_NUMA_AWARENESS_READ_TOPOLOGY, "true");
+    yarnConfiguration.set(YarnConfiguration.NM_NUMA_AWARENESS_NUMACTL_CMD, "/usr/bin/numactl");
+  }
+
+
+  private String getNumaCmdOutput() {
+    // architecture of 8 cpu cores
+    // randomly picked size of memory
+    return "available: 2 nodes (0-1)\n\t"
+            + "node 0 cpus: 0 2 4 6\n\t"
+            + "node 0 size: 73717 MB\n\t"
+            + "node 0 free: 73717 MB\n\t"
+            + "node 1 cpus: 1 3 5 7\n\t"
+            + "node 1 size: 73717 MB\n\t"
+            + "node 1 free: 73717 MB\n\t"
+            + "node distances:\n\t"
+            + "node 0 1\n\t"
+            + "0: 10 20\n\t"
+            + "1: 20 10";
+  }
+
+  private Context createAndGetMockContext() {
+    Context mockContext = mock(Context.class);
+    @SuppressWarnings("unchecked")
+    ConcurrentHashMap<ContainerId, Container> mockContainers = mock(
+            ConcurrentHashMap.class);
+    mockContainer = mock(Container.class);
+    when(mockContainer.getResourceMappings())
+            .thenReturn(new ResourceMappings());
+    when(mockContainers.get(any())).thenReturn(mockContainer);
+    when(mockContext.getContainers()).thenReturn(mockContainers);
+    when(mockContainer.getResource()).thenReturn(Resource.newInstance(2048, 2));
+    return mockContext;
+  }
+
+  private void testAllocateNumaResource(String containerId, Resource resource,
+                                        String memNodes, String cpuNodes) throws Exception {
+    when(mockContainer.getContainerId())
+            .thenReturn(ContainerId.fromString(containerId));
+    when(mockContainer.getResource()).thenReturn(resource);
+    NumaResourceAllocation numaResourceAllocation =
+            numaResourceAllocator.allocateNumaNodes(mockContainer);
+    String[] commands = containerExecutor.getNumaCommands(numaResourceAllocation);
+    assertEquals(Arrays.asList(commands), Arrays.asList("/usr/bin/numactl",
+            "--interleave=" + memNodes, "--cpunodebind=" + cpuNodes));
+  }
+
+  @Test
+  public void testAllocateNumaMemoryResource() throws Exception {
+    // keeping cores constant for testing memory resources
+
+    // allocates node 0 for memory and cpu
+    testAllocateNumaResource("container_1481156246874_0001_01_000001",
+            Resource.newInstance(2048, 2), "0", "0");
+
+    // allocates node 1 for memory and cpu since allocator uses round robin assignment
+    testAllocateNumaResource("container_1481156246874_0001_01_000002",
+            Resource.newInstance(60000, 2), "1", "1");
+
+    // allocates node 0,1 for memory since there is no sufficient memory in any one node
+    testAllocateNumaResource("container_1481156246874_0001_01_000003",
+            Resource.newInstance(80000, 2), "0,1", "0");
+
+    // returns null since there are no sufficient resources available for the request
+    when(mockContainer.getContainerId()).thenReturn(
+            ContainerId.fromString("container_1481156246874_0001_01_000004"));
+    when(mockContainer.getResource())
+            .thenReturn(Resource.newInstance(80000, 2));
+    Assert.assertNull(numaResourceAllocator.allocateNumaNodes(mockContainer));
+
+    // allocates node 1 for memory and cpu
+    testAllocateNumaResource("container_1481156246874_0001_01_000005",
+            Resource.newInstance(1024, 2), "1", "1");
+  }
+
+  @Test
+  public void testAllocateNumaCpusResource() throws Exception {
+    // keeping memory constant
+
+    // allocates node 0 for memory and cpu
+    testAllocateNumaResource("container_1481156246874_0001_01_000001",
+            Resource.newInstance(2048, 2), "0", "0");
+
+    // allocates node 1 for memory and cpu since allocator uses round robin assignment
+    testAllocateNumaResource("container_1481156246874_0001_01_000002",
+            Resource.newInstance(2048, 2), "1", "1");
+
+    // allocates node 0,1 for cpus since there is are no sufficient cpus available in any one node
+    testAllocateNumaResource("container_1481156246874_0001_01_000003",
+            Resource.newInstance(2048, 3), "0", "0,1");
+
+    // returns null since there are no sufficient resources available for the request
+    when(mockContainer.getContainerId()).thenReturn(
+            ContainerId.fromString("container_1481156246874_0001_01_000004"));
+    when(mockContainer.getResource()).thenReturn(Resource.newInstance(2048, 2));
+    Assert.assertNull(numaResourceAllocator.allocateNumaNodes(mockContainer));
+
+    // allocates node 1 for memory and cpu
+    testAllocateNumaResource("container_1481156246874_0001_01_000005",
+            Resource.newInstance(2048, 1), "1", "1");
+  }
+
+  @Test
+  public void testReacquireContainer() throws Exception {
+    @SuppressWarnings("unchecked")
+    ConcurrentHashMap<ContainerId, Container> mockContainers = mock(
+            ConcurrentHashMap.class);
+    Context mockContext = mock(Context.class);
+    NMStateStoreService mock = mock(NMStateStoreService.class);
+    when(mockContext.getNMStateStore()).thenReturn(mock);
+    ResourceMappings resourceMappings = new ResourceMappings();
+    AssignedResources assignedRscs = new AssignedResources();
+    when(mockContainer.getResource())
+            .thenReturn(Resource.newInstance(142900, 2));
+    ContainerId cid = ContainerId.fromString("container_1481156246874_0001_01_000001");
+    when(mockContainer.getContainerId()).thenReturn(cid);
+    NumaResourceAllocation numaResourceAllocation =
+            numaResourceAllocator.allocateNumaNodes(mockContainer);
+    assignedRscs.updateAssignedResources(Arrays.asList(numaResourceAllocation));
+    resourceMappings.addAssignedResources("numa", assignedRscs);
+    when(mockContainer.getResourceMappings()).thenReturn(resourceMappings);
+    when(mockContainers.get(any())).thenReturn(mockContainer);
+    when(mockContext.getContainers()).thenReturn(mockContainers);
+
+    // recovered numa resources should be added to the used resources and
+    // remaining will be available for further allocation.
+
+    ContainerReacquisitionContext containerReacquisitionContext =
+            new ContainerReacquisitionContext.Builder()
+                    .setContainerId(cid)
+                    .setUser("user")
+                    .setContainer(mockContainer)
+                    .build();
+
+    containerExecutor.reacquireContainer(containerReacquisitionContext);
+
+    // returns null since there are no sufficient resources available for the request
+    when(mockContainer.getContainerId()).thenReturn(
+            ContainerId.fromString("container_1481156246874_0001_01_000004"));
+    when(mockContainer.getResource())
+            .thenReturn(Resource.newInstance(156250, 2));

Review Comment:
   Better to check for a lesser resource size (1024) instead of 156250.



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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r948695039


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -364,33 +376,68 @@ public int relaunchContainer(ContainerStartContext ctx)
    * Create a new {@link ShellCommandExecutor} using the parameters.
    *
    * @param wrapperScriptPath the path to the script to execute
-   * @param containerIdStr the container ID
+   * @param container the container reference
    * @param user the application owner's username
    * @param pidFile the path to the container's PID file
-   * @param resource this parameter controls memory and CPU limits.
    * @param workDir If not-null, specifies the directory which should be set
    * as the current working directory for the command. If null,
    * the current working directory is not modified.
-   * @param environment the container environment
    * @return the new {@link ShellCommandExecutor}
    * @see ShellCommandExecutor
    */
   protected CommandExecutor buildCommandExecutor(String wrapperScriptPath, 
-      String containerIdStr, String user, Path pidFile, Resource resource,
-      File workDir, Map<String, String> environment) {
-    
+      Container container, String user, Path pidFile, File workDir) {
+
+    String containerIdStr = container.getContainerId().toString();
+    Resource resource = container.getResource();
     String[] command = getRunCommand(wrapperScriptPath,
         containerIdStr, user, pidFile, this.getConf(), resource);
 
+    if(numaAwarenessEnabled(this.getConf())) {
+      try {
+        numaResourceAllocator.init(this.getConf());
+        command = addNumaCommands(command, container);
+      } catch (YarnException e) {
+        LOG.warn("Exception :- ", e);
+        LOG.warn("Initializing container without NUMA.");
+      }
+    }
     LOG.info("launchContainer: {}", Arrays.toString(command));
     return new ShellCommandExecutor(
         command,
         workDir,
-        environment,
+            container.getLaunchContext().getEnvironment(),
         0L,
         false);
   }
 
+  String[] addNumaCommands(String[] commands, Container container){
+    try {
+      NumaResourceAllocation numaAllocation = numaResourceAllocator.allocateNumaNodes(container);

Review Comment:
   Reacquire Container has to recover the NUMA Resources.



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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1220995422

   :confetti_ball: **+1 overall**
   
   
   
   
   
   
   | Vote | Subsystem | Runtime |  Logfile | Comment |
   |:----:|----------:|--------:|:--------:|:-------:|
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   |||| _ Prechecks _ |
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   |||| _ trunk Compile Tests _ |
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   |||| _ Patch Compile Tests _ |
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   | -0 :warning: |  checkstyle  |   0m 32s | [/results-checkstyle-hadoop-yarn-project_hadoop-yarn_hadoop-yarn-server_hadoop-yarn-server-nodemanager.txt](https://ci-hadoop.apache.org/job/hadoop-multibranch/job/PR-4742/8/artifact/out/results-checkstyle-hadoop-yarn-project_hadoop-yarn_hadoop-yarn-server_hadoop-yarn-server-nodemanager.txt) |  hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager: The patch generated 18 new + 44 unchanged - 0 fixed = 62 total (was 44)  |
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   |||| _ Other Tests _ |
   | +1 :green_heart: |  unit  |  23m 56s |  |  hadoop-yarn-server-nodemanager in the patch passed.  |
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   |  |   | 125m 11s |  |  |
   
   
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   |----------:|:-------------|
   | Docker | ClientAPI=1.41 ServerAPI=1.41 base: https://ci-hadoop.apache.org/job/hadoop-multibranch/job/PR-4742/8/artifact/out/Dockerfile |
   | GITHUB PR | https://github.com/apache/hadoop/pull/4742 |
   | Optional Tests | dupname asflicense compile javac javadoc mvninstall mvnsite unit shadedclient spotbugs checkstyle codespell detsecrets |
   | uname | Linux c6eba40fa07d 4.15.0-191-generic #202-Ubuntu SMP Thu Aug 4 01:49:29 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux |
   | Build tool | maven |
   | Personality | dev-support/bin/hadoop.sh |
   | git revision | trunk / 5fab2e20c3ef08a830ab12068e49b6b7360d925b |
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   |  Test Results | https://ci-hadoop.apache.org/job/hadoop-multibranch/job/PR-4742/8/testReport/ |
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   | modules | C: hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager U: hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager |
   | Console output | https://ci-hadoop.apache.org/job/hadoop-multibranch/job/PR-4742/8/console |
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[GitHub] [hadoop] Samrat002 commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
Samrat002 commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1221790812

   check style is failing due to accesive params passed in the func args ! 
   created a follow up jira for fix :- [YARN-11256](https://issues.apache.org/jira/browse/YARN-11256)
    


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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1221242174

   :confetti_ball: **+1 overall**
   
   
   
   
   
   
   | Vote | Subsystem | Runtime |  Logfile | Comment |
   |:----:|----------:|--------:|:--------:|:-------:|
   | +0 :ok: |  reexec  |   0m 46s |  |  Docker mode activated.  |
   |||| _ Prechecks _ |
   | +1 :green_heart: |  dupname  |   0m  0s |  |  No case conflicting files found.  |
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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r948675282


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -98,6 +104,13 @@ public DefaultContainerExecutor() {
     }
   }
 
+  @VisibleForTesting

Review Comment:
   Looks this constructor is only for Testing purpose. Shall we use setMethod instead which is followed in other classes.



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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1223201962

   :confetti_ball: **+1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1220641291

   :broken_heart: **-1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r951007590


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -350,6 +384,14 @@ public int launchContainer(ContainerStartContext ctx)
       return exitCode;
     } finally {
       if (shExec != null) shExec.close();
+      try {

Review Comment:
   Shall we use the same postComplete method here as well.



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[GitHub] [hadoop] Samrat002 commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
Samrat002 commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r948944203


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -98,6 +104,13 @@ public DefaultContainerExecutor() {
     }
   }
 
+  @VisibleForTesting

Review Comment:
   removed the constructor and added setter which is set with annotation VisibleForTesting



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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r954564319


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -372,16 +409,19 @@ public int relaunchContainer(ContainerStartContext ctx)
    * as the current working directory for the command. If null,
    * the current working directory is not modified.
    * @param environment the container environment
+   * @param numaCommands list of prefix numa commands
    * @return the new {@link ShellCommandExecutor}
    * @see ShellCommandExecutor
    */
-  protected CommandExecutor buildCommandExecutor(String wrapperScriptPath, 
-      String containerIdStr, String user, Path pidFile, Resource resource,
-      File workDir, Map<String, String> environment) {
-    
+  protected CommandExecutor buildCommandExecutor(String wrapperScriptPath,
+                            String containerIdStr, String user, Path pidFile, Resource resource,
+                            File workDir, Map<String, String> environment, String[] numaCommands) {
+
     String[] command = getRunCommand(wrapperScriptPath,
         containerIdStr, user, pidFile, this.getConf(), resource);
 
+    command = concatStringCommands(command, numaCommands);

Review Comment:
   Shall we skip calling this when numaCommands is not passed.



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[GitHub] [hadoop] PrabhuJoseph commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1227467344

   Thanks @Samrat002 for the patch. The latest patch looks good to me, +1. Will commit it tomorrow if no other comments.
   


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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. WIP NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1214443897

   :broken_heart: **-1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1221298346

   :broken_heart: **-1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1219075241

   :confetti_ball: **+1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1218512101

   :broken_heart: **-1 overall**
   
   
   
   
   
   
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   | SpotBugs | module:hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager |
   |  |  Dead store to cpu in org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.addNumaCommands(String[], Container)  At DefaultContainerExecutor.java:org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.addNumaCommands(String[], Container)  At DefaultContainerExecutor.java:[line 419] |
   |  |  Dead store to mem in org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.addNumaCommands(String[], Container)  At DefaultContainerExecutor.java:org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.addNumaCommands(String[], Container)  At DefaultContainerExecutor.java:[line 418] |
   
   
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   This message was automatically generated.
   
   


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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1221001114

   :confetti_ball: **+1 overall**
   
   
   
   
   
   
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   This message was automatically generated.
   
   


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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1222801465

   :broken_heart: **-1 overall**
   
   
   
   
   
   
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   This message was automatically generated.
   
   


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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1223118666

   :broken_heart: **-1 overall**
   
   
   
   
   
   
   | Vote | Subsystem | Runtime |  Logfile | Comment |
   |:----:|----------:|--------:|:--------:|:-------:|
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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r954556722


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -1040,4 +1080,92 @@ public void updateYarnSysFS(Context ctx, String user,
       String appId, String spec) throws IOException {
     throw new ServiceStateException("Implementation unavailable");
   }
+
+  @Override
+  public int reacquireContainer(ContainerReacquisitionContext ctx)
+          throws IOException, InterruptedException {
+    try {
+      if (numaResourceAllocator != null) {
+        numaResourceAllocator.recoverNumaResource(ctx.getContainerId());
+      }
+      return super.reacquireContainer(ctx);
+    } finally {
+      postComplete(ctx.getContainerId());
+    }
+  }
+
+  /**
+   * clean up and release of resources.
+   *
+   * @param containerId containerId of running container
+   */
+  public void postComplete(final ContainerId containerId) {
+    if (numaResourceAllocator != null) {
+      try {
+        numaResourceAllocator.releaseNumaResource(containerId);
+      } catch (ResourceHandlerException e) {
+        LOG.warn("NumaResource release failed for " +
+                "containerId: {}. Exception: ", containerId, e);
+      }
+    }
+  }
+
+  /**
+   * @param resourceAllocation NonNull NumaResourceAllocation object reference
+   * @return Array of numa specific commands
+   */
+  String[] getNumaCommands(NumaResourceAllocation resourceAllocation) {
+    String[] numaCommand = new String[3];
+    numaCommand[0] = this.getConf().get(YarnConfiguration.NM_NUMA_AWARENESS_NUMACTL_CMD,

Review Comment:
   Better to read this config and initialize in the init.



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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1221346928

   :confetti_ball: **+1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1222791038

   :broken_heart: **-1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. WIP NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1214400685

   :broken_heart: **-1 overall**
   
   
   
   
   
   
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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r948677524


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -364,33 +376,68 @@ public int relaunchContainer(ContainerStartContext ctx)
    * Create a new {@link ShellCommandExecutor} using the parameters.
    *
    * @param wrapperScriptPath the path to the script to execute
-   * @param containerIdStr the container ID
+   * @param container the container reference
    * @param user the application owner's username
    * @param pidFile the path to the container's PID file
-   * @param resource this parameter controls memory and CPU limits.
    * @param workDir If not-null, specifies the directory which should be set
    * as the current working directory for the command. If null,
    * the current working directory is not modified.
-   * @param environment the container environment
    * @return the new {@link ShellCommandExecutor}
    * @see ShellCommandExecutor
    */
   protected CommandExecutor buildCommandExecutor(String wrapperScriptPath, 
-      String containerIdStr, String user, Path pidFile, Resource resource,
-      File workDir, Map<String, String> environment) {
-    
+      Container container, String user, Path pidFile, File workDir) {
+
+    String containerIdStr = container.getContainerId().toString();
+    Resource resource = container.getResource();
     String[] command = getRunCommand(wrapperScriptPath,
         containerIdStr, user, pidFile, this.getConf(), resource);
 
+    if(numaAwarenessEnabled(this.getConf())) {
+      try {
+        numaResourceAllocator.init(this.getConf());

Review Comment:
   The numaResourceAllocator.init needs to be moved into init() method



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[GitHub] [hadoop] hadoop-yetus commented on pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
hadoop-yetus commented on PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#issuecomment-1227375854

   :confetti_ball: **+1 overall**
   
   
   
   
   
   
   | Vote | Subsystem | Runtime |  Logfile | Comment |
   |:----:|----------:|--------:|:--------:|:-------:|
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   |||| _ Prechecks _ |
   | +1 :green_heart: |  dupname  |   0m  0s |  |  No case conflicting files found.  |
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   | +1 :green_heart: |  test4tests  |   0m  0s |  |  The patch appears to include 2 new or modified test files.  |
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   | -0 :warning: |  checkstyle  |   0m 29s | [/results-checkstyle-hadoop-yarn-project_hadoop-yarn_hadoop-yarn-server_hadoop-yarn-server-nodemanager.txt](https://ci-hadoop.apache.org/job/hadoop-multibranch/job/PR-4742/19/artifact/out/results-checkstyle-hadoop-yarn-project_hadoop-yarn_hadoop-yarn-server_hadoop-yarn-server-nodemanager.txt) |  hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager: The patch generated 5 new + 42 unchanged - 0 fixed = 47 total (was 42)  |
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[GitHub] [hadoop] PrabhuJoseph commented on a diff in pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph commented on code in PR #4742:
URL: https://github.com/apache/hadoop/pull/4742#discussion_r954575871


##########
hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/main/java/org/apache/hadoop/yarn/server/nodemanager/DefaultContainerExecutor.java:
##########
@@ -1040,4 +1080,92 @@ public void updateYarnSysFS(Context ctx, String user,
       String appId, String spec) throws IOException {
     throw new ServiceStateException("Implementation unavailable");
   }
+
+  @Override
+  public int reacquireContainer(ContainerReacquisitionContext ctx)
+          throws IOException, InterruptedException {
+    try {
+      if (numaResourceAllocator != null) {
+        numaResourceAllocator.recoverNumaResource(ctx.getContainerId());
+      }
+      return super.reacquireContainer(ctx);
+    } finally {
+      postComplete(ctx.getContainerId());
+    }
+  }
+
+  /**
+   * clean up and release of resources.
+   *
+   * @param containerId containerId of running container
+   */
+  public void postComplete(final ContainerId containerId) {
+    if (numaResourceAllocator != null) {
+      try {
+        numaResourceAllocator.releaseNumaResource(containerId);
+      } catch (ResourceHandlerException e) {
+        LOG.warn("NumaResource release failed for " +
+                "containerId: {}. Exception: ", containerId, e);
+      }
+    }
+  }
+
+  /**
+   * @param resourceAllocation NonNull NumaResourceAllocation object reference
+   * @return Array of numa specific commands
+   */
+  String[] getNumaCommands(NumaResourceAllocation resourceAllocation) {
+    String[] numaCommand = new String[3];
+    numaCommand[0] = this.getConf().get(YarnConfiguration.NM_NUMA_AWARENESS_NUMACTL_CMD,
+            YarnConfiguration.DEFAULT_NM_NUMA_AWARENESS_NUMACTL_CMD);
+    numaCommand[1] = "--interleave=" + String.join(",", resourceAllocation.getMemNodes());
+    numaCommand[2] = "--cpunodebind=" + String.join(",", resourceAllocation.getCpuNodes());
+    return numaCommand;
+
+  }
+
+  /**
+   * @param firstStringArray  Array of String
+   * @param secondStringArray Array of String
+   * @return combined array of string where first elements are from firstStringArray
+   * and later are the elements from secondStringArray
+   */
+  String[] concatStringCommands(String[] firstStringArray, String[] secondStringArray) {

Review Comment:
   The Numa Commands has to be in prefix.



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[GitHub] [hadoop] PrabhuJoseph merged pull request #4742: YARN-11196. NUMA support in DCE

Posted by GitBox <gi...@apache.org>.
PrabhuJoseph merged PR #4742:
URL: https://github.com/apache/hadoop/pull/4742


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