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Posted to issues@kylin.apache.org by "Shaofeng SHI (JIRA)" <ji...@apache.org> on 2019/03/13 14:52:00 UTC
[jira] [Closed] (KYLIN-3824) Spark - Extract Fact Table Distinct
Columns step causes java.lang.OutOfMemoryError: Java heap space
[ https://issues.apache.org/jira/browse/KYLIN-3824?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Shaofeng SHI closed KYLIN-3824.
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> Spark - Extract Fact Table Distinct Columns step causes java.lang.OutOfMemoryError: Java heap space
> ---------------------------------------------------------------------------------------------------
>
> Key: KYLIN-3824
> URL: https://issues.apache.org/jira/browse/KYLIN-3824
> Project: Kylin
> Issue Type: Bug
> Components: Spark Engine
> Affects Versions: v2.5.0, v2.6.0, v2.5.1, v2.5.2
> Environment: CentOS 7
> 3 workers and 1 master.
> 4 cpu, 16GB RAM each
> Reporter: Alexander
> Assignee: Alexander
> Priority: Major
> Fix For: v2.6.1
>
> Attachments: KYLIN-3824.master.001.patch
>
>
> Try to build huge cube on weak envirment.
> Environment:
> Cluster with 3 nodes.
> Max AM container size - 5GB.
>
> kylin_intermediate table ~500 files of size started from 4kb up to 300mb.
>
> When spark job executor take file larger than ~70MB on step mapPartitionsToPair (194) it got exception:
> 2019-02-21 20:29:40 ERROR SparkUncaughtExceptionHandler:91 - [Container in shutdown] Uncaught exception in thread Thread[Executor task launch worker for task 1,5,main]
> java.lang.OutOfMemoryError: Java heap space
> at java.util.Arrays.copyOfRange(Arrays.java:3664)
> at java.lang.String.<init>(String.java:207)
> at java.lang.String.substring(String.java:1969)
> at java.lang.String.split(String.java:2353)
> at java.lang.String.split(String.java:2422)
> at org.apache.kylin.engine.spark.SparkUtil$1.call(SparkUtil.java:164)
> at org.apache.kylin.engine.spark.SparkUtil$1.call(SparkUtil.java:160)
> at org.apache.spark.api.java.JavaPairRDD$$anonfun$toScalaFunction$1.apply(JavaPairRDD.scala:1040)
> at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)
> at scala.collection.convert.Wrappers$IteratorWrapper.next(Wrappers.scala:31)
> at com.google.common.collect.Lists.newArrayList(Lists.java:145)
> at org.apache.kylin.engine.spark.SparkFactDistinct$FlatOutputFucntion.call(SparkFactDistinct.java:313)
> at org.apache.kylin.engine.spark.SparkFactDistinct$FlatOutputFucntion.call(SparkFactDistinct.java:239)
> at org.apache.spark.api.java.JavaRDDLike$$anonfun$fn$7$1.apply(JavaRDDLike.scala:186)
> at org.apache.spark.api.java.JavaRDDLike$$anonfun$fn$7$1.apply(JavaRDDLike.scala:186)
> at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:801)
> at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:801)
> at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:49)
> at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
> at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
> at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:96)
> at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:53)
> at org.apache.spark.scheduler.Task.run(Task.scala:109)
> at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:345)
> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745)
>
>
>
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