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Posted to commits@taverna.apache.org by st...@apache.org on 2015/02/23 11:05:33 UTC
[48/79] [partial] incubator-taverna-language git commit: Revert
"temporarily empty repository"
http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/14/147eda4d-f40f-418b-bca2-dc12e19122de.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/14/147eda4d-f40f-418b-bca2-dc12e19122de.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/14/147eda4d-f40f-418b-bca2-dc12e19122de.txt
new file mode 100644
index 0000000..6181cf3
--- /dev/null
+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/14/147eda4d-f40f-418b-bca2-dc12e19122de.txt
@@ -0,0 +1 @@
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\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/14/14b9027d-11bb-4586-bff7-89130856409b.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/14/14b9027d-11bb-4586-bff7-89130856409b.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/14/14b9027d-11bb-4586-bff7-89130856409b.txt
new file mode 100644
index 0000000..efe3c46
--- /dev/null
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@@ -0,0 +1 @@
+<ns2:getStatusResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><status>RUNNING</status></ns2:getStatusResponse>
\ No newline at end of file
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/18/18d41521-e314-4122-a4ff-cb7718982935.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/18/18d41521-e314-4122-a4ff-cb7718982935.txt
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index 0000000..0e5ea08
--- /dev/null
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@@ -0,0 +1 @@
+RUNNING
\ No newline at end of file
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/1f/1f536bcf-ba43-44ec-a983-b30a45f2b739.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/1f/1f536bcf-ba43-44ec-a983-b30a45f2b739.txt
new file mode 100644
index 0000000..efe3c46
--- /dev/null
+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/1f/1f536bcf-ba43-44ec-a983-b30a45f2b739.txt
@@ -0,0 +1 @@
+<ns2:getStatusResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><status>RUNNING</status></ns2:getStatusResponse>
\ No newline at end of file
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/21/219626eb-a4fc-4c83-9132-67b2b40d5a68.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/21/219626eb-a4fc-4c83-9132-67b2b40d5a68.txt
new file mode 100644
index 0000000..d3745e5
--- /dev/null
+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/21/219626eb-a4fc-4c83-9132-67b2b40d5a68.txt
@@ -0,0 +1 @@
+<ns2:getStatusResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><status>FINISHED</status></ns2:getStatusResponse>
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/26/268a47b4-34aa-42d0-96ad-98b99601a4e5.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/26/268a47b4-34aa-42d0-96ad-98b99601a4e5.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/26/268a47b4-34aa-42d0-96ad-98b99601a4e5.txt
new file mode 100644
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--- /dev/null
+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/26/268a47b4-34aa-42d0-96ad-98b99601a4e5.txt
@@ -0,0 +1 @@
+<ns2:getStatusResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><status>RUNNING</status></ns2:getStatusResponse>
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/28/28ccca88-6e06-4d5a-a43e-93ad263c6abd.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/28/28ccca88-6e06-4d5a-a43e-93ad263c6abd.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/28/28ccca88-6e06-4d5a-a43e-93ad263c6abd.txt
new file mode 100644
index 0000000..425f797
--- /dev/null
+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/28/28ccca88-6e06-4d5a-a43e-93ad263c6abd.txt
@@ -0,0 +1,8 @@
+<parameters><sequence>>sp|Q9BTV4|TMM43_HUMAN Transmembrane protein 43 OS=Homo sapiens GN=TMEM43 PE=1 SV=1
+MAANYSSTSTRREHVKVKTSSQPGFLERLSETSGGMFVGLMAFLLSFYLIFTNEGRALKT
+ATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVE
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+LLTVAAGWLFYRPLWALLIAGLALVPILVARTRVPAKKLE</sequence></parameters>
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http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/2a/2a8831af-c11f-4d0e-be9d-d90c170c1002.txt
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http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/2a/2a91a135-c649-4735-a02f-6db45b9c847e.txt
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http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/8e/8ed106dd-7ada-4d61-a3f6-01740454cd76.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/8e/8ed106dd-7ada-4d61-a3f6-01740454cd76.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/8e/8ed106dd-7ada-4d61-a3f6-01740454cd76.txt
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+<ns2:getStatusResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><status>RUNNING</status></ns2:getStatusResponse>
\ No newline at end of file
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/91/91fdc8e6-159e-495e-842a-ef51fe3ec534.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/91/91fdc8e6-159e-495e-842a-ef51fe3ec534.txt
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+<ns2:getStatusResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><status>RUNNING</status></ns2:getStatusResponse>
\ No newline at end of file
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/94/94a5377e-5752-433c-aa8b-c39bb461505f.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/94/94a5377e-5752-433c-aa8b-c39bb461505f.txt
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+xml
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/94/94d65aea-ed02-488c-aa38-d3b9840e4b65.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/94/94d65aea-ed02-488c-aa38-d3b9840e4b65.txt
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+iprscan-S20130531-112044-0159-59919420-oy
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/a2/a217d73f-1843-4162-9bae-a5b05541b538.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/a2/a217d73f-1843-4162-9bae-a5b05541b538.txt
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@@ -0,0 +1 @@
+<ns2:getResultResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><output>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\ No newline at end of file
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+<ns2:getStatusResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><status>RUNNING</status></ns2:getStatusResponse>
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+<parameters xmlns="http://soap.jdispatcher.ebi.ac.uk"><jobId xmlns="">iprscan-S20130531-112044-0159-59919420-oy</jobId></parameters>
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/a7/a7c9ef28-f3de-4566-aac6-90d5fa20318a.txt
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+<ns2:getStatusResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><status>RUNNING</status></ns2:getStatusResponse>
\ No newline at end of file
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+<parameters xmlns="http://soap.jdispatcher.ebi.ac.uk"><jobId xmlns="">iprscan-S20130531-112044-0159-59919420-oy</jobId></parameters>
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+<ns2:getStatusResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><status>RUNNING</status></ns2:getStatusResponse>
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/c4/c4776372-5fa1-4b05-92bc-585ccb4344af.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/c4/c4776372-5fa1-4b05-92bc-585ccb4344af.txt
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+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/c4/c4776372-5fa1-4b05-92bc-585ccb4344af.txt
@@ -0,0 +1 @@
+<parameters xmlns="http://soap.jdispatcher.ebi.ac.uk"><jobId xmlns="">iprscan-S20130531-112044-0159-59919420-oy</jobId></parameters>
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http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/cc/cc26451d-53c7-490d-8d9f-ac7a1f45e30e.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/cc/cc26451d-53c7-490d-8d9f-ac7a1f45e30e.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/cc/cc26451d-53c7-490d-8d9f-ac7a1f45e30e.txt
new file mode 100644
index 0000000..0e5ea08
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+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/cc/cc26451d-53c7-490d-8d9f-ac7a1f45e30e.txt
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+RUNNING
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http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/d3/d34be34f-e857-46ee-8ee2-5c3384e05655.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/d3/d34be34f-e857-46ee-8ee2-5c3384e05655.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/d3/d34be34f-e857-46ee-8ee2-5c3384e05655.txt
new file mode 100644
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--- /dev/null
+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/d3/d34be34f-e857-46ee-8ee2-5c3384e05655.txt
@@ -0,0 +1 @@
+RUNNING
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/d6/d69fe838-97dd-43cc-9a08-567cfb842f1a.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/d6/d69fe838-97dd-43cc-9a08-567cfb842f1a.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/d6/d69fe838-97dd-43cc-9a08-567cfb842f1a.txt
new file mode 100644
index 0000000..7da8010
--- /dev/null
+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/d6/d69fe838-97dd-43cc-9a08-567cfb842f1a.txt
@@ -0,0 +1 @@
+<parameters xmlns="http://soap.jdispatcher.ebi.ac.uk"><jobId xmlns="">iprscan-S20130531-112044-0159-59919420-oy</jobId></parameters>
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/da/dac12490-1cbc-4607-a825-40f121f69fc4.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/da/dac12490-1cbc-4607-a825-40f121f69fc4.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/da/dac12490-1cbc-4607-a825-40f121f69fc4.txt
new file mode 100644
index 0000000..d718ffe
--- /dev/null
+++ b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/da/dac12490-1cbc-4607-a825-40f121f69fc4.txt
@@ -0,0 +1 @@
+<ns2:getResultResponse xmlns:ns2="http://soap.jdispatcher.ebi.ac.uk"><output>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
P1szNTAtMzcwXSBOQSA/WzM3NS0zOTVdIE5BCgo=</output></ns2:getResultResponse>
\ No newline at end of file
http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/c08405cb/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/f2/f273b491-edd2-4e18-aba5-106279f491d8.txt
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diff --git a/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/f2/f273b491-edd2-4e18-aba5-106279f491d8.txt b/taverna-databundle/src/test/resources/full-example/ebi-wfrun-2013-05-31/intermediates/f2/f273b491-edd2-4e18-aba5-106279f491d8.txt
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@@ -0,0 +1 @@
+<parameters xmlns="http://soap.jdispatcher.ebi.ac.uk"><jobId xmlns="">iprscan-S20130531-112044-0159-59919420-oy</jobId></parameters>
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