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Posted to jira@arrow.apache.org by "Nicola Crane (Jira)" <ji...@apache.org> on 2022/10/27 19:46:00 UTC
[jira] [Updated] (ARROW-17576) [R] conda r-arrow Linux package has
[ https://issues.apache.org/jira/browse/ARROW-17576?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Nicola Crane updated ARROW-17576:
---------------------------------
Summary: [R] conda r-arrow Linux package has (was: conda r-arrow Linux package has )
> [R] conda r-arrow Linux package has
> ------------------------------------
>
> Key: ARROW-17576
> URL: https://issues.apache.org/jira/browse/ARROW-17576
> Project: Apache Arrow
> Issue Type: Bug
> Components: R
> Affects Versions: 9.0.0
> Environment: Ubuntu 20.04
> conda 4.13.0 py39hf3d152e_1 conda-forge
> Environment created based on attached script:
> # Name Version Build Channel
> _libgcc_mutex 0.1 conda_forge conda-forge
> _openmp_mutex 4.5 2_gnu conda-forge
> _r-mutex 1.0.1 anacondar_1 conda-forge
> abseil-cpp 20211102.0 h27087fc_1 conda-forge
> arrow-cpp 9.0.0 py310h893e394_0_cpu conda-forge
> aws-c-cal 0.5.11 h95a6274_0 conda-forge
> aws-c-common 0.6.2 h7f98852_0 conda-forge
> aws-c-event-stream 0.2.7 h3541f99_13 conda-forge
> aws-c-io 0.10.5 hfb6a706_0 conda-forge
> aws-checksums 0.1.11 ha31a3da_7 conda-forge
> aws-sdk-cpp 1.8.186 hb4091e7_3 conda-forge
> binutils_impl_linux-64 2.36.1 h193b22a_2 conda-forge
> bwidget 1.9.14 ha770c72_1 conda-forge
> bzip2 1.0.8 h7f98852_4 conda-forge
> c-ares 1.18.1 h7f98852_0 conda-forge
> ca-certificates 2022.6.15 ha878542_0 conda-forge
> cairo 1.16.0 ha61ee94_1013 conda-forge
> curl 7.83.1 h7bff187_0 conda-forge
> expat 2.4.8 h27087fc_0 conda-forge
> font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
> font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
> font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
> font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
> fontconfig 2.14.0 h8e229c2_0 conda-forge
> fonts-conda-ecosystem 1 0 conda-forge
> fonts-conda-forge 1 0 conda-forge
> freetype 2.12.1 hca18f0e_0 conda-forge
> fribidi 1.0.10 h36c2ea0_0 conda-forge
> gcc_impl_linux-64 12.1.0 hea43390_16 conda-forge
> gettext 0.19.8.1 h73d1719_1008 conda-forge
> gflags 2.2.2 he1b5a44_1004 conda-forge
> gfortran_impl_linux-64 12.1.0 h1db8e46_16 conda-forge
> glog 0.6.0 h6f12383_0 conda-forge
> graphite2 1.3.13 h58526e2_1001 conda-forge
> grpc-cpp 1.46.3 hbd84cd8_3 conda-forge
> gsl 2.7 he838d99_0 conda-forge
> gxx_impl_linux-64 12.1.0 hea43390_16 conda-forge
> harfbuzz 5.1.0 hf9f4e7c_0 conda-forge
> icu 70.1 h27087fc_0 conda-forge
> jpeg 9e h166bdaf_2 conda-forge
> kernel-headers_linux-64 2.6.32 he073ed8_15 conda-forge
> keyutils 1.6.1 h166bdaf_0 conda-forge
> krb5 1.19.3 h3790be6_0 conda-forge
> ld_impl_linux-64 2.36.1 hea4e1c9_2 conda-forge
> lerc 4.0.0 h27087fc_0 conda-forge
> libblas 3.9.0 16_linux64_openblas conda-forge
> libbrotlicommon 1.0.9 h166bdaf_7 conda-forge
> libbrotlidec 1.0.9 h166bdaf_7 conda-forge
> libbrotlienc 1.0.9 h166bdaf_7 conda-forge
> libcblas 3.9.0 16_linux64_openblas conda-forge
> libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
> libcurl 7.83.1 h7bff187_0 conda-forge
> libdeflate 1.13 h166bdaf_0 conda-forge
> libedit 3.1.20191231 he28a2e2_2 conda-forge
> libev 4.33 h516909a_1 conda-forge
> libevent 2.1.10 h9b69904_4 conda-forge
> libffi 3.4.2 h7f98852_5 conda-forge
> libgcc-devel_linux-64 12.1.0 h1ec3361_16 conda-forge
> libgcc-ng 12.1.0 h8d9b700_16 conda-forge
> libgfortran-ng 12.1.0 h69a702a_16 conda-forge
> libgfortran5 12.1.0 hdcd56e2_16 conda-forge
> libglib 2.72.1 h2d90d5f_0 conda-forge
> libgomp 12.1.0 h8d9b700_16 conda-forge
> libgoogle-cloud 1.40.2 hefc27d0_0 conda-forge
> libiconv 1.16 h516909a_0 conda-forge
> liblapack 3.9.0 16_linux64_openblas conda-forge
> libnghttp2 1.47.0 hdcd2b5c_1 conda-forge
> libnsl 2.0.0 h7f98852_0 conda-forge
> libopenblas 0.3.21 pthreads_h78a6416_2 conda-forge
> libpng 1.6.37 h753d276_4 conda-forge
> libprotobuf 3.20.1 h6239696_1 conda-forge
> libsanitizer 12.1.0 ha89aaad_16 conda-forge
> libsqlite 3.39.2 h753d276_1 conda-forge
> libssh2 1.10.0 haa6b8db_3 conda-forge
> libstdcxx-devel_linux-64 12.1.0 h1ec3361_16 conda-forge
> libstdcxx-ng 12.1.0 ha89aaad_16 conda-forge
> libthrift 0.16.0 h519c5ea_1 conda-forge
> libtiff 4.4.0 h0e0dad5_3 conda-forge
> libutf8proc 2.7.0 h7f98852_0 conda-forge
> libuuid 2.32.1 h7f98852_1000 conda-forge
> libwebp-base 1.2.4 h166bdaf_0 conda-forge
> libxcb 1.13 h7f98852_1004 conda-forge
> libxml2 2.9.14 h22db469_4 conda-forge
> libzlib 1.2.12 h166bdaf_2 conda-forge
> lz4-c 1.9.3 h9c3ff4c_1 conda-forge
> make 4.3 hd18ef5c_1 conda-forge
> ncurses 6.3 h27087fc_1 conda-forge
> numpy 1.23.2 py310h53a5b5f_0 conda-forge
> openssl 1.1.1q h166bdaf_0 conda-forge
> orc 1.7.5 h6c59b99_0 conda-forge
> pango 1.50.9 hc4f8a73_0 conda-forge
> pcre 8.45 h9c3ff4c_0 conda-forge
> pcre2 10.37 hc3806b6_1 conda-forge
> pip 22.2.2 pyhd8ed1ab_0 conda-forge
> pixman 0.40.0 h36c2ea0_0 conda-forge
> pthread-stubs 0.4 h36c2ea0_1001 conda-forge
> python 3.10.6 h582c2e5_0_cpython conda-forge
> python_abi 3.10 2_cp310 conda-forge
> r-arrow 9.0.0 r41h27087fc_0 conda-forge
> r-assertthat 0.2.1 r41hc72bb7e_2 conda-forge
> r-base 4.1.3 ha8c3e7c_2 conda-forge
> r-bit 4.0.4 r41hcfec24a_0 conda-forge
> r-bit64 4.0.5 r41hcfec24a_0 conda-forge
> r-cli 3.3.0 r41h7525677_0 conda-forge
> r-ellipsis 0.3.2 r41hcfec24a_0 conda-forge
> r-glue 1.6.2 r41h06615bd_0 conda-forge
> r-magrittr 2.0.3 r41h06615bd_0 conda-forge
> r-purrr 0.3.4 r41hcfec24a_1 conda-forge
> r-r6 2.5.1 r41hc72bb7e_0 conda-forge
> r-rlang 1.0.4 r41h7525677_0 conda-forge
> r-tidyselect 1.1.2 r41hc72bb7e_0 conda-forge
> r-vctrs 0.4.1 r41h7525677_0 conda-forge
> re2 2022.06.01 h27087fc_0 conda-forge
> readline 8.1.2 h0f457ee_0 conda-forge
> s2n 1.0.10 h9b69904_0 conda-forge
> sed 4.8 he412f7d_0 conda-forge
> setuptools 65.3.0 pyhd8ed1ab_1 conda-forge
> snappy 1.1.9 hbd366e4_1 conda-forge
> sysroot_linux-64 2.12 he073ed8_15 conda-forge
> tk 8.6.12 h27826a3_0 conda-forge
> tktable 2.10 hb7b940f_3 conda-forge
> tzdata 2022c h191b570_0 conda-forge
> wheel 0.37.1 pyhd8ed1ab_0 conda-forge
> xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
> xorg-libice 1.0.10 h7f98852_0 conda-forge
> xorg-libsm 1.2.3 hd9c2040_1000 conda-forge
> xorg-libx11 1.7.2 h7f98852_0 conda-forge
> xorg-libxau 1.0.9 h7f98852_0 conda-forge
> xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
> xorg-libxext 1.3.4 h7f98852_1 conda-forge
> xorg-libxrender 0.9.10 h7f98852_1003 conda-forge
> xorg-libxt 1.2.1 h7f98852_2 conda-forge
> xorg-renderproto 0.11.1 h7f98852_1002 conda-forge
> xorg-xextproto 7.3.0 h7f98852_1002 conda-forge
> xorg-xproto 7.0.31 h7f98852_1007 conda-forge
> xz 5.2.6 h166bdaf_0 conda-forge
> zlib 1.2.12 h166bdaf_2 conda-forge
> zstd 1.5.2 h6239696_4 conda-forge
> Reporter: Hans-Martin von Gaudecker
> Priority: Major
> Attachments: environment.yml
>
>
> I need to read parquet files in R using a conda environment. Works great on Windows, but on Linux, r-arrow comes without some core features. If this is expected, it would be great to flag it in the docs, at least for me, reading through [https://arrow.apache.org/docs/r/articles/install.html#method-1a---binary-r-package-containing-libarrow-binary-via-rspmconda] gives the impression that I need not worry about features (though pinning r-arrow to 8.0.1 gives a complete version lacking only lzo-support).
> After creating an environment based on the attached specification:
> {{{}(test-r-arrow) x@x/test-r-arrow$ R{}}}{{{}R version 4.1.3 (2022-03-10) – "One Push-Up"{}}}
> {{Copyright (C) 2022 The R Foundation for Statistical Computing}}
> {{Platform: x86_64-conda-linux-gnu (64-bit)}}
>
> {{R is free software and comes with ABSOLUTELY NO WARRANTY.}}
> {{You are welcome to redistribute it under certain conditions.}}
> {{{}Type 'license()' or 'licence()' for distribution details.{}}}{\{ }}
>
> {{Natural language support but running in an English locale}}
>
> {{R is a collaborative project with many contributors.}}
> {{Type 'contributors()' for more information and}}
> {{'citation()' on how to cite R or R packages in publications.}}
>
> {{Type 'demo()' for some demos, 'help()' for on-line help, or}}
> {{'help.start()' for an HTML browser interface to help.}}
> {{Type 'q()' to quit R.}}
>
> {{> library(arrow)}}
> {{Some features are not enabled in this build of Arrow. Run `arrow_info()` for more information.}}
> {{Attaching package: ‘arrow’}}
> {{The following object is masked from ‘package:utils’:}}{{ timestamp}}
>
> {{> arrow_info()}}
> {{Arrow package version: 9.0.0}}
> {{Capabilities:}}
> {{ }}
> {{dataset FALSE}}
> {{substrait FALSE}}
> {{parquet FALSE}}
> {{json FALSE}}
> {{s3 FALSE}}
> {{gcs FALSE}}
> {{utf8proc TRUE}}
> {{re2 TRUE}}
> {{snappy TRUE}}
> {{gzip TRUE}}
> {{brotli TRUE}}
> {{zstd TRUE}}
> {{lz4 TRUE}}
> {{lz4_frame TRUE}}
> {{lzo FALSE}}
> {{bz2 TRUE}}
> {{jemalloc TRUE}}
> {{mimalloc TRUE}}
> {{To reinstall with more optional capabilities enabled, see}}
> {{ [https://arrow.apache.org/docs/r/articles/install.html]}}
>
> {{Memory:}}
> {{ }}
> {{Allocator jemalloc}}
> {{Current 0 bytes}}
> {{{}Max 0 bytes{}}}{{{}Runtime:{}}}
> {{ }}
> {{SIMD Level avx2}}
> {{{}Detected SIMD Level avx2{}}}{{{}Build:{}}}
> {{ }}
> {{C++ Library Version 9.0.0}}
> {{C++ Compiler GNU}}
> {{C++ Compiler Version 10.4.0}}
> {{Git ID 13127e16b858dda3b8299a1e435c3c0ba5934fdc}}
>
> Creating the same environment on Windows produces:
>
> {{> arrow_info()}}
> {{Arrow package version: 9.0.0}}
> {{Capabilities:}}
> {{dataset TRUE}}
> {{substrait FALSE}}
> {{parquet TRUE}}
> {{json TRUE}}
> {{s3 TRUE}}
> {{gcs FALSE}}
> {{utf8proc TRUE}}
> {{re2 TRUE}}
> {{snappy TRUE}}
> {{gzip TRUE}}
> {{brotli TRUE}}
> {{zstd TRUE}}
> {{lz4 TRUE}}
> {{lz4_frame TRUE}}
> {{lzo FALSE}}
> {{bz2 TRUE}}
> {{jemalloc FALSE}}
> {{mimalloc TRUE}}
> {{Arrow options():}}
> {{arrow.use_threads FALSE}}
> {{{}Memory:{}}}{{{}Allocator mimalloc{}}}
> {{Current 0 bytes}}
> {{Max 0 bytes}}
> {{Runtime:}}
> {{SIMD Level avx2}}
> {{Detected SIMD Level avx2}}
> {{Build:}}
> {{C++ Library Version 9.0.0}}
> {{C++ Compiler MSVC}}
> {{C++ Compiler Version 19.16.27048.0}}
>
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