You are viewing a plain text version of this content. The canonical link for it is here.
Posted to issues@beam.apache.org by "ASF GitHub Bot (Jira)" <ji...@apache.org> on 2020/04/14 16:05:00 UTC

[jira] [Work logged] (BEAM-9746) [Go SDK] Empty side inputs causing spurious zero elements

     [ https://issues.apache.org/jira/browse/BEAM-9746?focusedWorklogId=422132&page=com.atlassian.jira.plugin.system.issuetabpanels:worklog-tabpanel#worklog-422132 ]

ASF GitHub Bot logged work on BEAM-9746:
----------------------------------------

                Author: ASF GitHub Bot
            Created on: 14/Apr/20 16:04
            Start Date: 14/Apr/20 16:04
    Worklog Time Spent: 10m 
      Work Description: lostluck commented on pull request #11413: [BEAM-9746] check for 0 length copies from state
URL: https://github.com/apache/beam/pull/11413
 
 
   @thetorpedodog discovered that side inputs that produce empty pcollections would produce a spurious "zero element". The root cause was because the SDK's handling of state api responses didn't check for 0 length byte buffers from the API, and interpret them as the EOF signal.
   
   In particular for elements whose coded form is length prefixed, this would yield a 0 length read for a request of 1 byte when calling graph.DecodeVarInt, but no error, preventing subsequent error handling. This would tell the decoder that the encoded size is 0, and it would then read that data accordingly.
   
   Now when there are 0 length copies and there are no more pages of data, the Read call will immeadiately return EOF rather than defer to the next call, which in the empty case, never comes.
   
   While it's unlikely that runners would ever intentionally return mid stream 0 length reads while saying there is subsequent data, we can't simply end the paging on empty buffers. It's inline with Go's io.Reader interface semantics to permit 0 length reads without error, as like in any short read case, data could be available later, instead of waiting for the full length of the read, and require multiple reads. 
   
   It's probable that there are places we should be handling the [io.Reader](https://pkg.go.dev/io?tab=doc#Reader) contract more rigorously, such as by always handling the non-zero read bytes even when an error is returned, but care would need to be taken during such a retrofit.
   
   ------------------------
   
   Thank you for your contribution! Follow this checklist to help us incorporate your contribution quickly and easily:
   
    - [ ] [**Choose reviewer(s)**](https://beam.apache.org/contribute/#make-your-change) and mention them in a comment (`R: @username`).
    - [ ] Format the pull request title like `[BEAM-XXX] Fixes bug in ApproximateQuantiles`, where you replace `BEAM-XXX` with the appropriate JIRA issue, if applicable. This will automatically link the pull request to the issue.
    - [ ] Update `CHANGES.md` with noteworthy changes.
    - [ ] If this contribution is large, please file an Apache [Individual Contributor License Agreement](https://www.apache.org/licenses/icla.pdf).
   
   See the [Contributor Guide](https://beam.apache.org/contribute) for more tips on [how to make review process smoother](https://beam.apache.org/contribute/#make-reviewers-job-easier).
   
   Post-Commit Tests Status (on master branch)
   ------------------------------------------------------------------------------------------------
   
   Lang | SDK | Apex | Dataflow | Flink | Gearpump | Samza | Spark
   --- | --- | --- | --- | --- | --- | --- | ---
   Go | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/) | --- | --- | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Go_VR_Flink/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Go_VR_Flink/lastCompletedBuild/) | --- | --- | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Go_VR_Spark/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Go_VR_Spark/lastCompletedBuild/)
   Java | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Java/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Apex/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Apex/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Java11/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Java11/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_PVR_Flink_Batch/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_PVR_Flink_Batch/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_PVR_Flink_Streaming/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_PVR_Flink_Streaming/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Gearpump/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Gearpump/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Samza/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Samza/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Spark/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Spark/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_PVR_Spark_Batch/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_PVR_Spark_Batch/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_SparkStructuredStreaming/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Java_ValidatesRunner_SparkStructuredStreaming/lastCompletedBuild/)
   Python | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Python2/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Python2/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Python35/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Python35/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Python36/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Python36/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Python37/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Python37/lastCompletedBuild/) | --- | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Py_VR_Dataflow/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Py_VR_Dataflow/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Py_VR_Dataflow_V2/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Py_VR_Dataflow_V2/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Py_ValCont/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Py_ValCont/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PreCommit_Python2_PVR_Flink_Cron/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PreCommit_Python2_PVR_Flink_Cron/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PostCommit_Python35_VR_Flink/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Python35_VR_Flink/lastCompletedBuild/) | --- | --- | [![Build Status](https://builds.apache.org/job/beam_PostCommit_Python_VR_Spark/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_Python_VR_Spark/lastCompletedBuild/)
   XLang | --- | --- | --- | [![Build Status](https://builds.apache.org/job/beam_PostCommit_XVR_Flink/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_XVR_Flink/lastCompletedBuild/) | --- | --- | [![Build Status](https://builds.apache.org/job/beam_PostCommit_XVR_Spark/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PostCommit_XVR_Spark/lastCompletedBuild/)
   
   Pre-Commit Tests Status (on master branch)
   ------------------------------------------------------------------------------------------------
   
   --- |Java | Python | Go | Website
   --- | --- | --- | --- | ---
   Non-portable | [![Build Status](https://builds.apache.org/job/beam_PreCommit_Java_Cron/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PreCommit_Java_Cron/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PreCommit_Python_Cron/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PreCommit_Python_Cron/lastCompletedBuild/)<br>[![Build Status](https://builds.apache.org/job/beam_PreCommit_PythonLint_Cron/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PreCommit_PythonLint_Cron/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PreCommit_Go_Cron/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PreCommit_Go_Cron/lastCompletedBuild/) | [![Build Status](https://builds.apache.org/job/beam_PreCommit_Website_Cron/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PreCommit_Website_Cron/lastCompletedBuild/) 
   Portable | --- | [![Build Status](https://builds.apache.org/job/beam_PreCommit_Portable_Python_Cron/lastCompletedBuild/badge/icon)](https://builds.apache.org/job/beam_PreCommit_Portable_Python_Cron/lastCompletedBuild/) | --- | ---
   
   See [.test-infra/jenkins/README](https://github.com/apache/beam/blob/master/.test-infra/jenkins/README.md) for trigger phrase, status and link of all Jenkins jobs.
   
 
----------------------------------------------------------------
This is an automated message from the Apache Git Service.
To respond to the message, please log on to GitHub and use the
URL above to go to the specific comment.
 
For queries about this service, please contact Infrastructure at:
users@infra.apache.org


Issue Time Tracking
-------------------

            Worklog Id:     (was: 422132)
    Remaining Estimate: 0h
            Time Spent: 10m

> [Go SDK] Empty side inputs causing spurious zero elements
> ---------------------------------------------------------
>
>                 Key: BEAM-9746
>                 URL: https://issues.apache.org/jira/browse/BEAM-9746
>             Project: Beam
>          Issue Type: Improvement
>          Components: sdk-go
>            Reporter: Robert Burke
>            Assignee: Robert Burke
>            Priority: Major
>          Time Spent: 10m
>  Remaining Estimate: 0h
>
> A user discovered that empty side inputs would spuriously provide a single zero element.
> The error was narrowed down to the Go SDK's state manager codeĀ  copying the stateGetResponse data wasn't checking that the original data source even had any bytes in it, leading it in particular to interpret length prefixed data as having 0 length, which would cause zero value elements to be generated. Notably, this caused empty strings.



--
This message was sent by Atlassian Jira
(v8.3.4#803005)