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Posted to dev@airavata.apache.org by K Yoshimoto <ke...@sdsc.edu> on 2014/10/15 21:34:51 UTC

xbaya-gui distribution?

I'm playing with airavata 0.14.  I am going through some of the
quickstart tutorials:
http://airavata.apache.org/documentation/quickstart-tutorials.html

I'm at the step of firing up xbaya-gui, but I'm not seeing
an obvious release distribution for it.  Is it somewhere
else in the tree?  I was looking in release-artifacts, but
only see:

release-artifacts$ ls
apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
apache-airavata-server-0.14-SNAPSHOT-bin.zip

Should I look someplace else?  Did I miss a build step?

Kenneth


Re: xbaya-gui distribution?

Posted by Marlon Pierce <ma...@iu.edu>.
ps -elf |grep java or something similar to find rogue java processes.

On 10/29/14, 4:32 PM, Chathuri Wimalasena wrote:
> May be the server stop function does not work properly. If airavata-server
> does not have any errors, I think you are good to use it. We had similar
> issue with integration tests previously. Before you use airavata server,
> check whether there are running airavata servers from the build
> (integration-tests). If so, kill them before starting the new airavata
> server.
>
> On Wed, Oct 29, 2014 at 4:06 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
>
>> Thanks for the hint!  That log seems to be saying the experiment has
>> completed, but mvn clean install is hung.  I wonder if I should be
>> using the 0.13 binary distribution.  Has the API changed since then?
>>
>> ...
>> nitor.AiravataWorkflowNodeStatusUpdator  - Updating workflow node status
>> for IDontNeedaNode_45178f88-6fe4-4aa7-b850-b9892c028a18:COMPLETED
>> 2014-10-29 11:58:36,936 [pool-6-thread-1] INFO
>> org.apache.airavata.api.server.listener.AiravataExperimentStatusUpdator  -
>> Updating the experiment status of experiment:
>> echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 to EXECUTING
>> 2014-10-29 11:58:36,956 [pool-6-thread-1] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Gfac
>> internal state changed to: COMPLETED
>> 2014-10-29 11:58:36,960 [pool-6-thread-1] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  -
>> Experiment Completed, So removing the ZK entry for the
>> experimentechoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4
>> 2014-10-29 11:58:36,960 [pool-6-thread-1] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  -
>> Zookeeper experiment Path:
>> /gfac-experiments/gfac-node0/echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4+IDontNeedaNode_0dfc2c7e-a99e-4520-af9e-74f1b1888566
>>
>> On Wed, Oct 29, 2014 at 03:59:53PM -0400, Chathuri Wimalasena wrote:
>>> Hi Kenneth,
>>>
>>> You can go to
>>>
>> modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/bin/
>>> and check airavata.log file. It will show you if something went wrong
>> while
>>> executing the experiment.
>>>
>>> Thanks.
>>> Chathuri
>>>
>>>
>>>
>>> On Wed, Oct 29, 2014 at 3:27 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
>>>
>>>> Looks like my classpath has version 1.7.2, rather than 1.7.6.
>>>> I was trying a new git pull, mvn clean install to try to see
>>>> where I'm getting the bad path.  My mvn clean install is hanging
>>>> trying to run an experiment.  Is the big refactoring making things
>>>> unstable right now?
>>>>
>>>> mvn clean install
>>>> ...
>>>> [INFO] Running job in localhost
>>>> [INFO] ========================
>>>> [INFO] Adding applications...
>>>> [INFO] Creating experiment...
>>>> [INFO] Experiment Id returned :
>>>> echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4
>>>> [INFO] Experiment launched successfully
>>>>
>>>> [INFO] Monitoring job in localhost
>>>> [INFO] ===========================
>>>> [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : CREATED
>> [Wed
>>>> Oct 29 11:58:31 PDT 2014]
>>>> [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : LAUNCHED
>> [Wed
>>>> Oct 29 11:58:33 PDT 2014]
>>>> [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : EXECUTING
>>>> [Wed Oct 29 11:58:36 PDT 2014]
>>>>
>>>>
>>>>
>>>> On Fri, Oct 24, 2014 at 09:46:59PM -0400, Shameera Rathnayaka wrote:
>>>>> Hi Kenneth,
>>>>>
>>>>> Check that slf4j-api-1.7.6.jar is in your class path? if not add it
>> to
>>>> the
>>>>> class path, normally this should be added to class path when we run
>> "mvn
>>>>> clean install"(download the jar) and "mvn eclipse:eclipse" (Added
>> jar to
>>>>> the project classpath). not sure why that is not in classpath.
>>>>>
>>>>> Yes, that warning can be ignored.
>>>>>
>>>>> Thanks,
>>>>> Shameera.
>>>>>
>>>>> On Fri, Oct 24, 2014 at 7:07 PM, K Yoshimoto <ke...@sdsc.edu>
>> wrote:
>>>>>> Thanks for the hints, Shameera.
>>>>>> I'm not seeing red libraries or other errors in the run
>> configurations
>>>>>> or build path.
>>>>>>
>>>>>> I'm seeing this error now:
>>>>>> Exception in thread "main" java.lang.NoClassDefFoundError:
>>>>>> org/slf4j/LoggerFactory
>>>>>>          at org.apache.airavata.xbaya.XBaya.<clinit>(XBaya.java:35)
>>>>>> Caused by: java.lang.ClassNotFoundException:
>> org.slf4j.LoggerFactory
>>>>>>          at java.net.URLClassLoader$1.run(URLClassLoader.java:217)
>>>>>>          at java.security.AccessController.doPrivileged(Native
>> Method)
>>>>>>          at
>> java.net.URLClassLoader.findClass(URLClassLoader.java:205)
>>>>>>          at java.lang.ClassLoader.loadClass(ClassLoader.java:323)
>>>>>>          at
>>>> sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
>>>>>>          at java.lang.ClassLoader.loadClass(ClassLoader.java:268)
>>>>>>          ... 1 more
>>>>>> Could not find the main class: org.apache.airavata.xbaya.XBaya.
>> Program
>>>>>> will exit.
>>>>>>
>>>>>>  From mvn clean install, I do get this warning:
>>>>>>
>>>>>> Tests run: 1, Failures: 0, Errors: 0, Skipped: 1, Time elapsed:
>> 0.031
>>>> sec
>>>>>> Running org.apache.airavata.security.userstore.JDBCUserStoreTest
>>>>>> SLF4J: Class path contains multiple SLF4J bindings.
>>>>>> SLF4J: Found binding in
>>>>>>
>> [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-log4j12/1.7.6/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
>>>>>> SLF4J: Found binding in
>>>>>>
>> [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-simple/1.7.6/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
>>>>>> SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for
>> an
>>>>>> explanation.
>>>>>> SLF4J: Actual binding is of type
>> [org.slf4j.impl.Log4jLoggerFactory]
>>>>>> log4j:WARN No appenders could be found for logger
>>>>>> (org.apache.airavata.security.util.PasswordDigester).
>>>>>> log4j:WARN Please initialize the log4j system properly.
>>>>>> log4j:WARN See
>> http://logging.apache.org/log4j/1.2/faq.html#noconfig
>>>> for
>>>>>> more info.
>>>>>> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed:
>> 57.169
>>>> sec
>>>>>> Running
>> org.apache.airavata.security.userstore.SessionDBUserStoreTest
>>>>>> Is the warning ignorable, or could this be causing a failure to
>> find
>>>> main?
>>>>>> Kenneth
>>>>>>
>>>>>> On Thu, Oct 23, 2014 at 08:32:47PM -0400, Shameera Rathnayaka
>> wrote:
>>>>>>> Hi Kenneth,
>>>>>>>
>>>>>>> I am not much familiar with eclipse. But after googling the above
>>>> issue
>>>>>>> found following will help you to resolve classpath issue.
>>>>>>>
>>>>>>> 1) Run Configurations
>>>>>>>
>>>>>>>     - Right click on your project
>>>>>>>        - then click "Run" -> "Run Configurations..."
>>>>>>>        - there check your settings for you project
>>>>>>>        - here look into you tab "Classpath" under "User Entries"
>>>>>>>
>>>>>>> 2) Project classpath
>>>>>>>
>>>>>>>     - Right click on your project -> "Properties" -> "Java Build
>> Path"
>>>>>>>        - now check the "Source" Tab as well as your "Libraries"
>> Tab
>>>>>>>        - Problems should be marked red in the "Libraries" tab
>>>>>>>
>>>>>>> Thanks,
>>>>>>> Shameera.
>>>>>>>
>>>>>>> On Thu, Oct 23, 2014 at 5:45 PM, K Yoshimoto <ke...@sdsc.edu>
>>>> wrote:
>>>>>>>> I did
>>>>>>>> git pull
>>>>>>>> mvn clean install
>>>>>>>> mvn eclipse:clean
>>>>>>>> mvn eclipse:eclipse
>>>>>>>>
>>>>>>>> I am getting an error when trying to run XBaya from Eclipse:
>>>>>>>> "The project: airavata-workflow-model-core which is referenced
>> by
>>>> the
>>>>>>>> classpath, does not exist."
>>>>>>>>
>>>>>>>> Maybe I have some garbage left over in my config somewhere?
>> Or is
>>>>>>>> airavata-workflow-model-core supposed to be there?
>>>>>>>>
>>>>>>>> I think mvn eclipse:eclipse worked:
>>>>>>>> ...
>>>>>>>> [INFO]
>>>>>>>> [INFO] <<< maven-eclipse-plugin:2.9:eclipse (default-cli) @
>>>>>>>> airavata-xbaya-gui <<<
>>>>>>>> [INFO]
>>>>>>>> [INFO] --- maven-eclipse-plugin:2.9:eclipse (default-cli) @
>>>>>>>> airavata-xbaya-gui ---
>>>>>>>> [INFO] Using Eclipse Workspace: null
>>>>>>>> [INFO] Adding default classpath container:
>>>>>>>> org.eclipse.jdt.launching.JRE_CONTAINER
>>>>>>>> [INFO] Wrote Eclipse project for "airavata-xbaya-gui" to
>>>>>>>> /media/scigap/scigap/javaclient/airavata/modules/xbaya-gui.
>>>>>>>> [INFO]
>>>>>>>> [INFO]
>>>>>>>>
>> ------------------------------------------------------------------------
>>>>>>>> [INFO] Reactor Summary:
>>>>>>>> [INFO]
>>>>>>>> [INFO] Airavata ..........................................
>> SUCCESS
>>>>>> [1.564s]
>>>>>>>> [INFO] Airavata Configuration ............................
>> SUCCESS
>>>>>> [0.042s]
>>>>>>>> [INFO] Airavata Server Configuration .....................
>> SUCCESS
>>>>>> [0.065s]
>>>>>>>> [INFO] Airavata Client Configuration .....................
>> SUCCESS
>>>>>> [0.060s]
>>>>>>>> [INFO] Airavata API ......................................
>> SUCCESS
>>>>>> [0.086s]
>>>>>>>> [INFO] Airavata Data Models ..............................
>> SUCCESS
>>>>>> [0.488s]
>>>>>>>> [INFO] Airavata Generated Stubs Skeltons .................
>> SUCCESS
>>>>>> [0.211s]
>>>>>>>> [INFO] Airavata Model Utilities ..........................
>> SUCCESS
>>>>>> [0.157s]
>>>>>>>> [INFO] Airavata Commons ..................................
>> SUCCESS
>>>>>> [0.063s]
>>>>>>>> [INFO] Airavata Common Utilities .........................
>> SUCCESS
>>>>>> [2.065s]
>>>>>>>> [INFO] Airavata GFac Schema Utilities ....................
>> SUCCESS
>>>>>> [1.323s]
>>>>>>>> [INFO] Airavata Credential Store .........................
>> SUCCESS
>>>>>> [1.085s]
>>>>>>>> [INFO] Airavata Registry .................................
>> SUCCESS
>>>>>> [0.026s]
>>>>>>>> [INFO] Airavata Registry CPI .............................
>> SUCCESS
>>>>>> [0.353s]
>>>>>>>> [INFO] Airavata JPA Registry .............................
>> SUCCESS
>>>>>> [1.008s]
>>>>>>>> [INFO] Airavata Application Catalog ......................
>> SUCCESS
>>>>>> [0.063s]
>>>>>>>> [INFO] Airavata Application Catalog CPI ..................
>> SUCCESS
>>>>>> [0.532s]
>>>>>>>> [INFO] Airavata Application Catalog Data .................
>> SUCCESS
>>>>>> [0.544s]
>>>>>>>> [INFO] Airavata Workflow Execution Context ...............
>> SUCCESS
>>>>>> [0.598s]
>>>>>>>> [INFO] Airavata WS Messenger .............................
>> SUCCESS
>>>>>> [0.054s]
>>>>>>>> [INFO] Airavata Messenger Commons ........................
>> SUCCESS
>>>>>> [0.863s]
>>>>>>>> [INFO] Airavata Messenger Client .........................
>> SUCCESS
>>>>>> [0.690s]
>>>>>>>> [INFO] Airavata Workflow Tracking ........................
>> SUCCESS
>>>>>> [0.817s]
>>>>>>>> [INFO] Airavata Messaging Framework ......................
>> SUCCESS
>>>>>> [0.022s]
>>>>>>>> [INFO] Airavata Messaging Framework Core .................
>> SUCCESS
>>>>>> [0.365s]
>>>>>>>> [INFO] Airavata GFac .....................................
>> SUCCESS
>>>>>> [0.021s]
>>>>>>>> [INFO] Airavata GFac Core ................................
>> SUCCESS
>>>>>> [0.542s]
>>>>>>>> [INFO] Airavata Gfac Service .............................
>> SUCCESS
>>>>>> [0.705s]
>>>>>>>> [INFO] GSISSH Library ....................................
>> SUCCESS
>>>>>> [0.282s]
>>>>>>>> [INFO] Airavata GFac GSI-SSH implementation ..............
>> SUCCESS
>>>>>> [0.575s]
>>>>>>>> [INFO] Airavata GFac SSH implementation ..................
>> SUCCESS
>>>>>> [0.737s]
>>>>>>>> [INFO] Airavata GFac Grid Job Monitor ....................
>> SUCCESS
>>>>>> [2.168s]
>>>>>>>> [INFO] Airavata GFac Local implementation ................
>> SUCCESS
>>>>>> [1.005s]
>>>>>>>> [INFO] Airavata Orchestrator .............................
>> SUCCESS
>>>>>> [0.046s]
>>>>>>>> [INFO] Airavata Orchestrator Core ........................
>> SUCCESS
>>>>>> [1.460s]
>>>>>>>> [INFO] Airavata Orchestrator Service .....................
>> SUCCESS
>>>>>> [1.036s]
>>>>>>>> [INFO] Airavata Workflow Model Parent ....................
>> SUCCESS
>>>>>> [0.023s]
>>>>>>>> [INFO] Airavata Workflow Model Core ......................
>> SUCCESS
>>>>>> [0.469s]
>>>>>>>> [INFO] Airavata Workflow Component .......................
>> SUCCESS
>>>>>> [0.547s]
>>>>>>>> [INFO] Airavata WS Monitor ...............................
>> SUCCESS
>>>>>> [0.500s]
>>>>>>>> [INFO] Airavata GFac EC2 Implementation ..................
>> SUCCESS
>>>>>> [0.638s]
>>>>>>>> [INFO] Airavata Workflow Engine ..........................
>> SUCCESS
>>>>>> [0.770s]
>>>>>>>> [INFO] Airavata API Server ...............................
>> SUCCESS
>>>>>> [0.762s]
>>>>>>>> [INFO] Airavata Client SDKS ..............................
>> SUCCESS
>>>>>> [0.019s]
>>>>>>>> [INFO] Apache Airavata PHP SDK ...........................
>> SUCCESS
>>>>>> [0.023s]
>>>>>>>> [INFO] Airavata Client CPP SDK ...........................
>> SUCCESS
>>>>>> [0.045s]
>>>>>>>> [INFO] Airavata Client Samples ...........................
>> SUCCESS
>>>>>> [0.101s]
>>>>>>>> [INFO] Airavata Client ...................................
>> SUCCESS
>>>>>> [0.545s]
>>>>>>>> [INFO] Airavata GFac Hadoop implementation ...............
>> SUCCESS
>>>>>> [1.878s]
>>>>>>>> [INFO] Airavata GFac GRAM implementation .................
>> SUCCESS
>>>>>> [0.472s]
>>>>>>>> [INFO] Airavata GFac BES implementation ..................
>> SUCCESS
>>>>>> [1.400s]
>>>>>>>> [INFO] Airavata Security Implementation ..................
>> SUCCESS
>>>>>> [0.221s]
>>>>>>>> [INFO] Airavata Credential Store Service .................
>> SUCCESS
>>>>>> [0.018s]
>>>>>>>> [INFO] airavata-credential-store-webapp ..................
>> SUCCESS
>>>>>> [0.359s]
>>>>>>>> [INFO] Airavata Orchestrator Client SDK ..................
>> SUCCESS
>>>>>> [0.390s]
>>>>>>>> [INFO] Airavata Tools ....................................
>> SUCCESS
>>>>>> [0.020s]
>>>>>>>> [INFO] registry-tool .....................................
>> SUCCESS
>>>>>> [0.052s]
>>>>>>>> [INFO] Airavata Standalone Server ........................
>> SUCCESS
>>>>>> [0.493s]
>>>>>>>> [INFO] Airavata Test Suite ...............................
>> SUCCESS
>>>>>> [0.576s]
>>>>>>>> [INFO] distribution ......................................
>> SUCCESS
>>>>>> [0.044s]
>>>>>>>> [INFO] Airavata server distribution ......................
>> SUCCESS
>>>>>> [1.686s]
>>>>>>>> [INFO] Airavata Client Distribution Parent ...............
>> SUCCESS
>>>>>> [0.022s]
>>>>>>>> [INFO] Airavata Client Java Distribution .................
>> SUCCESS
>>>>>> [0.522s]
>>>>>>>> [INFO] Airavata release artifacts ........................
>> SUCCESS
>>>>>> [0.035s]
>>>>>>>> [INFO] Airavata Integration Tests ........................
>> SUCCESS
>>>>>> [0.695s]
>>>>>>>> [INFO] Airavata XBaya ....................................
>> SUCCESS
>>>>>> [0.680s]
>>>>>>>> [INFO]
>>>>>>>>
>> ------------------------------------------------------------------------
>>>>>>>> [INFO] BUILD SUCCESS
>>>>>>>> [INFO]
>>>>>>>>
>> ------------------------------------------------------------------------
>>>>>>>> [INFO] Total time: 38.665s
>>>>>>>> [INFO] Finished at: Thu Oct 23 14:20:59 PDT 2014
>>>>>>>> [INFO] Final Memory: 45M/273M
>>>>>>>> [INFO]
>>>>>>>>
>> ------------------------------------------------------------------------
>>>>>>>>
>>>>>>>>
>>>>>>>> On Thu, Oct 23, 2014 at 01:26:57PM -0700, K Yoshimoto wrote:
>>>>>>>>> Shameera,
>>>>>>>>>
>>>>>>>>>   Thanks for the info.  I did not do the mvn eclipse:eclipse.
>>>>>>>>> I'll update my repo, then do mvn eclipse:eclipse and
>> delete/load
>>>>>>>>> XBaya.  I'll update if it works or if I run into something
>> else.
>>>>>>>>> Kenneth
>>>>>>>>>
>>>>>>>>> On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka
>>>> wrote:
>>>>>>>>>> Hi Yoshimoto,
>>>>>>>>>>
>>>>>>>>>> I just try to build the latest trunk and i don't see any
>>>>>> compilation
>>>>>>>> error.
>>>>>>>>>> To narrow down the issue, I have few questions for you.
>>>>>>>>>> 1. are you working on latest trunk or previous released
>>>> version?
>>>>>> if it
>>>>>>>> is
>>>>>>>>>> trunk make sure you have latest revision. if it is previous
>>>>>> version,
>>>>>>>> which
>>>>>>>>>> version you are using?
>>>>>>>>>> 2. Could you able to build the source code using "mvn clean
>>>>>> install"
>>>>>>>>>> without any issue?
>>>>>>>>>> 3. Did you run mvn eclispse:eclipse command before you
>> open the
>>>>>> project
>>>>>>>>>> from eclipse?
>>>>>>>>>>
>>>>>>>>>> According to the error stack it seems eclipse project
>> doesn't
>>>> has
>>>>>> all
>>>>>>>>>> required jar in class path."mvn eclipse:eclipse" will solve
>>>> this
>>>>>> issue
>>>>>>>> but
>>>>>>>>>> to effect the changes, delete the airavata eclipse project
>> and
>>>>>> reopen
>>>>>>>> the
>>>>>>>>>> source code as new project, in other ward reload the
>> eclipse
>>>>>> project.
>>>>>>>> Now
>>>>>>>>>> try to run the XBaya class.
>>>>>>>>>>
>>>>>>>>>> I am waiting for you answers to my above questions, please
>> let
>>>> me
>>>>>> know
>>>>>>>> if
>>>>>>>>>> you hit any issue down the path.
>>>>>>>>>>
>>>>>>>>>> Thanks,
>>>>>>>>>> Shameera.
>>>>>>>>>>
>>>>>>>>>> On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <
>> kenneth@sdsc.edu
>>>>>> wrote:
>>>>>>>>>>> Hi,
>>>>>>>>>>>
>>>>>>>>>>>   I am trying to start up the XBaya GUI from Eclipse, but
>> get
>>>>>>>>>>> an error about missing type ErrorWindow.  Has anyone seen
>>>> this?
>>>>>>>>>>> Where is ErrorWindow supposed to come from?
>>>>>>>>>>>
>>>>>>>>>>> SLF4J: Class path contains multiple SLF4J bindings.
>>>>>>>>>>> SLF4J: Found binding in
>>>>>>>>>>>
>> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
>>>>>>>>>>> SLF4J: Found binding in
>>>>>>>>>>>
>> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
>>>>>>>>>>> SLF4J: Found binding in
>>>>>>>>>>>
>> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
>>>>>>>>>>> SLF4J: Found binding in
>>>>>>>>>>>
>> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
>>>>>>>>>>> SLF4J: See
>> http://www.slf4j.org/codes.html#multiple_bindings
>>>>>> for an
>>>>>>>>>>> explanation.
>>>>>>>>>>> SLF4J: Actual binding is of type
>>>>>> [org.slf4j.impl.Log4jLoggerFactory]
>>>>>>>>>>> Exception in thread "main" java.lang.Error: Unresolved
>>>>>> compilation
>>>>>>>>>>> problems:
>>>>>>>>>>>          The method getErrorWindow() from the type
>> XBayaGUI
>>>>>> refers to
>>>>>>>> the
>>>>>>>>>>> missing type ErrorWindow
>>>>>>>>>>>          The method getErrorWindow() from the type
>> XBayaGUI
>>>>>> refers to
>>>>>>>> the
>>>>>>>>>>> missing type ErrorWindow
>>>>>>>>>>>
>>>>>>>>>>>          at
>>>> org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
>>>>>>>>>>>          at
>>>> org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
>>>>>>>>>>> Thanks,
>>>>>>>>>>> Kenneth
>>>>>>>>>>>
>>>>>>>>>>> On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara
>> premadasa
>>>> wrote:
>>>>>>>>>>>> Hi Kenneth,
>>>>>>>>>>>>
>>>>>>>>>>>> I have attached a sample guide on how to run a simple
>>>> workflow
>>>>>> with
>>>>>>>>>>>> Airavata in the thread 'Unable to start Airavata after
>> the
>>>>>> source
>>>>>>>> build'
>>>>>>>>>>> .
>>>>>>>>>>>> I think you can refer to that till the Quickstart
>>>> tutorials are
>>>>>>>>>>> officially
>>>>>>>>>>>> online.
>>>>>>>>>>>>
>>>>>>>>>>>> In order to answer you question, the XBaya GUI binary
>>>>>> distribution
>>>>>>>> is not
>>>>>>>>>>>> yet present in the trunk. Therefore at present XBaya
>> GUI
>>>> can't
>>>>>> be
>>>>>>>> started
>>>>>>>>>>>> by extracting XBaya GUI archive. Instead the GUI
>> client is
>>>>>> started
>>>>>>>> by
>>>>>>>>>>>> directly running org.apache.airavata.xbaya.XBaya class
>>>> through
>>>>>> an
>>>>>>>> IDE.
>>>>>>>>>>>> Hope this helps.
>>>>>>>>>>>>
>>>>>>>>>>>> Thanks!
>>>>>>>>>>>> Ishara
>>>>>>>>>>>>
>>>>>>>>>>>> On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <
>>>> kenneth@sdsc.edu
>>>>>>>> wrote:
>>>>>>>>>>>>> Thanks, Suresh.  I'll keep an eye on the dev list to
>> see
>>>> when
>>>>>>>>>>>>> things are more up-to-date.  If you notice things are
>>>> ready,
>>>>>>>>>>>>> could you ping me also?
>>>>>>>>>>>>>
>>>>>>>>>>>>> Kenneth
>>>>>>>>>>>>>
>>>>>>>>>>>>> On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh
>> Marru
>>>> wrote:
>>>>>>>>>>>>>> Hi Kenneth,
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> Sorry the tutorials are out of date and we are
>> trying
>>>> to
>>>>>> fix
>>>>>>>> them
>>>>>>>>>>> with
>>>>>>>>>>>>> the 0.14 release.
>>>>>>>>>>>>>> Shameera is close to bring these tutorials back
>> online,
>>>>>> some
>>>>>>>>>>> discussion
>>>>>>>>>>>>> here - http://markmail.org/thread/6dtvhd7posjosnvv
>>>>>>>>>>>>>> Suresh
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> On Oct 15, 2014, at 3:34 PM, K Yoshimoto <
>>>> kenneth@sdsc.edu
>>>>>>>> wrote:
>>>>>>>>>>>>>>> I'm playing with airavata 0.14.  I am going
>> through
>>>> some
>>>>>> of
>>>>>>>> the
>>>>>>>>>>>>>>> quickstart tutorials:
>>>>>>>>>>>>>>>
>> http://airavata.apache.org/documentation/quickstart-tutorials.html
>>>>>>>>>>>>>>> I'm at the step of firing up xbaya-gui, but I'm
>> not
>>>>>> seeing
>>>>>>>>>>>>>>> an obvious release distribution for it.  Is it
>>>> somewhere
>>>>>>>>>>>>>>> else in the tree?  I was looking in
>>>> release-artifacts,
>>>>>> but
>>>>>>>>>>>>>>> only see:
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> release-artifacts$ ls
>>>>>>>>>>>>>>>
>>>> apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
>> apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
>>>> apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
>> apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
>>>> apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
>> apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
>>>>>>>>>>>>>>> apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
>>>>>>>>>>>>>>> apache-airavata-server-0.14-SNAPSHOT-bin.zip
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> Should I look someplace else?  Did I miss a build
>>>> step?
>>>>>>>>>>>>>>> Kenneth
>>>>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>> --
>>>>>>>>>>>> *Best Regards.*
>>>>>>>>>>>>
>>>>>>>>>>>> *Ishara Premadasa,*
>>>>>>>>>>>> http://isharapremadasa.blogspot.com
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> --
>>>>>>>>>> Best Regards,
>>>>>>>>>> Shameera Rathnayaka.
>>>>>>>>>>
>>>>>>>>>> email: shameera AT apache.org , shameerainfo AT gmail.com
>>>>>>>>>> Blog : http://shameerarathnayaka.blogspot.com/
>>>>>>>
>>>>>>>
>>>>>>> --
>>>>>>> Best Regards,
>>>>>>> Shameera Rathnayaka.
>>>>>>>
>>>>>>> email: shameera AT apache.org , shameerainfo AT gmail.com
>>>>>>> Blog : http://shameerarathnayaka.blogspot.com/
>>>>>
>>>>>
>>>>> --
>>>>> Best Regards,
>>>>> Shameera Rathnayaka.
>>>>>
>>>>> email: shameera AT apache.org , shameerainfo AT gmail.com
>>>>> Blog : http://shameerarathnayaka.blogspot.com/


Re: xbaya-gui distribution?

Posted by Chathuri Wimalasena <ka...@gmail.com>.
May be the server stop function does not work properly. If airavata-server
does not have any errors, I think you are good to use it. We had similar
issue with integration tests previously. Before you use airavata server,
check whether there are running airavata servers from the build
(integration-tests). If so, kill them before starting the new airavata
server.

On Wed, Oct 29, 2014 at 4:06 PM, K Yoshimoto <ke...@sdsc.edu> wrote:

>
> Thanks for the hint!  That log seems to be saying the experiment has
> completed, but mvn clean install is hung.  I wonder if I should be
> using the 0.13 binary distribution.  Has the API changed since then?
>
> ...
> nitor.AiravataWorkflowNodeStatusUpdator  - Updating workflow node status
> for IDontNeedaNode_45178f88-6fe4-4aa7-b850-b9892c028a18:COMPLETED
> 2014-10-29 11:58:36,936 [pool-6-thread-1] INFO
> org.apache.airavata.api.server.listener.AiravataExperimentStatusUpdator  -
> Updating the experiment status of experiment:
> echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 to EXECUTING
> 2014-10-29 11:58:36,956 [pool-6-thread-1] INFO
> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Gfac
> internal state changed to: COMPLETED
> 2014-10-29 11:58:36,960 [pool-6-thread-1] INFO
> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  -
> Experiment Completed, So removing the ZK entry for the
> experimentechoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4
> 2014-10-29 11:58:36,960 [pool-6-thread-1] INFO
> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  -
> Zookeeper experiment Path:
> /gfac-experiments/gfac-node0/echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4+IDontNeedaNode_0dfc2c7e-a99e-4520-af9e-74f1b1888566
>
> On Wed, Oct 29, 2014 at 03:59:53PM -0400, Chathuri Wimalasena wrote:
> > Hi Kenneth,
> >
> > You can go to
> >
> modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/bin/
> > and check airavata.log file. It will show you if something went wrong
> while
> > executing the experiment.
> >
> > Thanks.
> > Chathuri
> >
> >
> >
> > On Wed, Oct 29, 2014 at 3:27 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> >
> > >
> > > Looks like my classpath has version 1.7.2, rather than 1.7.6.
> > > I was trying a new git pull, mvn clean install to try to see
> > > where I'm getting the bad path.  My mvn clean install is hanging
> > > trying to run an experiment.  Is the big refactoring making things
> > > unstable right now?
> > >
> > > mvn clean install
> > > ...
> > > [INFO] Running job in localhost
> > > [INFO] ========================
> > > [INFO] Adding applications...
> > > [INFO] Creating experiment...
> > > [INFO] Experiment Id returned :
> > > echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4
> > > [INFO] Experiment launched successfully
> > >
> > > [INFO] Monitoring job in localhost
> > > [INFO] ===========================
> > > [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : CREATED
> [Wed
> > > Oct 29 11:58:31 PDT 2014]
> > > [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : LAUNCHED
> [Wed
> > > Oct 29 11:58:33 PDT 2014]
> > > [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : EXECUTING
> > > [Wed Oct 29 11:58:36 PDT 2014]
> > >
> > >
> > >
> > > On Fri, Oct 24, 2014 at 09:46:59PM -0400, Shameera Rathnayaka wrote:
> > > > Hi Kenneth,
> > > >
> > > > Check that slf4j-api-1.7.6.jar is in your class path? if not add it
> to
> > > the
> > > > class path, normally this should be added to class path when we run
> "mvn
> > > > clean install"(download the jar) and "mvn eclipse:eclipse" (Added
> jar to
> > > > the project classpath). not sure why that is not in classpath.
> > > >
> > > > Yes, that warning can be ignored.
> > > >
> > > > Thanks,
> > > > Shameera.
> > > >
> > > > On Fri, Oct 24, 2014 at 7:07 PM, K Yoshimoto <ke...@sdsc.edu>
> wrote:
> > > >
> > > > >
> > > > > Thanks for the hints, Shameera.
> > > > > I'm not seeing red libraries or other errors in the run
> configurations
> > > > > or build path.
> > > > >
> > > > > I'm seeing this error now:
> > > > > Exception in thread "main" java.lang.NoClassDefFoundError:
> > > > > org/slf4j/LoggerFactory
> > > > >         at org.apache.airavata.xbaya.XBaya.<clinit>(XBaya.java:35)
> > > > > Caused by: java.lang.ClassNotFoundException:
> org.slf4j.LoggerFactory
> > > > >         at java.net.URLClassLoader$1.run(URLClassLoader.java:217)
> > > > >         at java.security.AccessController.doPrivileged(Native
> Method)
> > > > >         at
> java.net.URLClassLoader.findClass(URLClassLoader.java:205)
> > > > >         at java.lang.ClassLoader.loadClass(ClassLoader.java:323)
> > > > >         at
> > > sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
> > > > >         at java.lang.ClassLoader.loadClass(ClassLoader.java:268)
> > > > >         ... 1 more
> > > > > Could not find the main class: org.apache.airavata.xbaya.XBaya.
> Program
> > > > > will exit.
> > > > >
> > > > > From mvn clean install, I do get this warning:
> > > > >
> > > > > Tests run: 1, Failures: 0, Errors: 0, Skipped: 1, Time elapsed:
> 0.031
> > > sec
> > > > > Running org.apache.airavata.security.userstore.JDBCUserStoreTest
> > > > > SLF4J: Class path contains multiple SLF4J bindings.
> > > > > SLF4J: Found binding in
> > > > >
> > >
> [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-log4j12/1.7.6/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > SLF4J: Found binding in
> > > > >
> > >
> [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-simple/1.7.6/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for
> an
> > > > > explanation.
> > > > > SLF4J: Actual binding is of type
> [org.slf4j.impl.Log4jLoggerFactory]
> > > > > log4j:WARN No appenders could be found for logger
> > > > > (org.apache.airavata.security.util.PasswordDigester).
> > > > > log4j:WARN Please initialize the log4j system properly.
> > > > > log4j:WARN See
> http://logging.apache.org/log4j/1.2/faq.html#noconfig
> > > for
> > > > > more info.
> > > > > Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed:
> 57.169
> > > sec
> > > > > Running
> org.apache.airavata.security.userstore.SessionDBUserStoreTest
> > > > >
> > > > > Is the warning ignorable, or could this be causing a failure to
> find
> > > main?
> > > > >
> > > > > Kenneth
> > > > >
> > > > > On Thu, Oct 23, 2014 at 08:32:47PM -0400, Shameera Rathnayaka
> wrote:
> > > > > > Hi Kenneth,
> > > > > >
> > > > > > I am not much familiar with eclipse. But after googling the above
> > > issue
> > > > > > found following will help you to resolve classpath issue.
> > > > > >
> > > > > > 1) Run Configurations
> > > > > >
> > > > > >    - Right click on your project
> > > > > >       - then click "Run" -> "Run Configurations..."
> > > > > >       - there check your settings for you project
> > > > > >       - here look into you tab "Classpath" under "User Entries"
> > > > > >
> > > > > > 2) Project classpath
> > > > > >
> > > > > >    - Right click on your project -> "Properties" -> "Java Build
> Path"
> > > > > >       - now check the "Source" Tab as well as your "Libraries"
> Tab
> > > > > >       - Problems should be marked red in the "Libraries" tab
> > > > > >
> > > > > > Thanks,
> > > > > > Shameera.
> > > > > >
> > > > > > On Thu, Oct 23, 2014 at 5:45 PM, K Yoshimoto <ke...@sdsc.edu>
> > > wrote:
> > > > > >
> > > > > > >
> > > > > > > I did
> > > > > > > git pull
> > > > > > > mvn clean install
> > > > > > > mvn eclipse:clean
> > > > > > > mvn eclipse:eclipse
> > > > > > >
> > > > > > > I am getting an error when trying to run XBaya from Eclipse:
> > > > > > > "The project: airavata-workflow-model-core which is referenced
> by
> > > the
> > > > > > > classpath, does not exist."
> > > > > > >
> > > > > > > Maybe I have some garbage left over in my config somewhere?
> Or is
> > > > > > > airavata-workflow-model-core supposed to be there?
> > > > > > >
> > > > > > > I think mvn eclipse:eclipse worked:
> > > > > > > ...
> > > > > > > [INFO]
> > > > > > > [INFO] <<< maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > > > > > airavata-xbaya-gui <<<
> > > > > > > [INFO]
> > > > > > > [INFO] --- maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > > > > > airavata-xbaya-gui ---
> > > > > > > [INFO] Using Eclipse Workspace: null
> > > > > > > [INFO] Adding default classpath container:
> > > > > > > org.eclipse.jdt.launching.JRE_CONTAINER
> > > > > > > [INFO] Wrote Eclipse project for "airavata-xbaya-gui" to
> > > > > > > /media/scigap/scigap/javaclient/airavata/modules/xbaya-gui.
> > > > > > > [INFO]
> > > > > > > [INFO]
> > > > > > >
> > > > >
> > >
> ------------------------------------------------------------------------
> > > > > > > [INFO] Reactor Summary:
> > > > > > > [INFO]
> > > > > > > [INFO] Airavata ..........................................
> SUCCESS
> > > > > [1.564s]
> > > > > > > [INFO] Airavata Configuration ............................
> SUCCESS
> > > > > [0.042s]
> > > > > > > [INFO] Airavata Server Configuration .....................
> SUCCESS
> > > > > [0.065s]
> > > > > > > [INFO] Airavata Client Configuration .....................
> SUCCESS
> > > > > [0.060s]
> > > > > > > [INFO] Airavata API ......................................
> SUCCESS
> > > > > [0.086s]
> > > > > > > [INFO] Airavata Data Models ..............................
> SUCCESS
> > > > > [0.488s]
> > > > > > > [INFO] Airavata Generated Stubs Skeltons .................
> SUCCESS
> > > > > [0.211s]
> > > > > > > [INFO] Airavata Model Utilities ..........................
> SUCCESS
> > > > > [0.157s]
> > > > > > > [INFO] Airavata Commons ..................................
> SUCCESS
> > > > > [0.063s]
> > > > > > > [INFO] Airavata Common Utilities .........................
> SUCCESS
> > > > > [2.065s]
> > > > > > > [INFO] Airavata GFac Schema Utilities ....................
> SUCCESS
> > > > > [1.323s]
> > > > > > > [INFO] Airavata Credential Store .........................
> SUCCESS
> > > > > [1.085s]
> > > > > > > [INFO] Airavata Registry .................................
> SUCCESS
> > > > > [0.026s]
> > > > > > > [INFO] Airavata Registry CPI .............................
> SUCCESS
> > > > > [0.353s]
> > > > > > > [INFO] Airavata JPA Registry .............................
> SUCCESS
> > > > > [1.008s]
> > > > > > > [INFO] Airavata Application Catalog ......................
> SUCCESS
> > > > > [0.063s]
> > > > > > > [INFO] Airavata Application Catalog CPI ..................
> SUCCESS
> > > > > [0.532s]
> > > > > > > [INFO] Airavata Application Catalog Data .................
> SUCCESS
> > > > > [0.544s]
> > > > > > > [INFO] Airavata Workflow Execution Context ...............
> SUCCESS
> > > > > [0.598s]
> > > > > > > [INFO] Airavata WS Messenger .............................
> SUCCESS
> > > > > [0.054s]
> > > > > > > [INFO] Airavata Messenger Commons ........................
> SUCCESS
> > > > > [0.863s]
> > > > > > > [INFO] Airavata Messenger Client .........................
> SUCCESS
> > > > > [0.690s]
> > > > > > > [INFO] Airavata Workflow Tracking ........................
> SUCCESS
> > > > > [0.817s]
> > > > > > > [INFO] Airavata Messaging Framework ......................
> SUCCESS
> > > > > [0.022s]
> > > > > > > [INFO] Airavata Messaging Framework Core .................
> SUCCESS
> > > > > [0.365s]
> > > > > > > [INFO] Airavata GFac .....................................
> SUCCESS
> > > > > [0.021s]
> > > > > > > [INFO] Airavata GFac Core ................................
> SUCCESS
> > > > > [0.542s]
> > > > > > > [INFO] Airavata Gfac Service .............................
> SUCCESS
> > > > > [0.705s]
> > > > > > > [INFO] GSISSH Library ....................................
> SUCCESS
> > > > > [0.282s]
> > > > > > > [INFO] Airavata GFac GSI-SSH implementation ..............
> SUCCESS
> > > > > [0.575s]
> > > > > > > [INFO] Airavata GFac SSH implementation ..................
> SUCCESS
> > > > > [0.737s]
> > > > > > > [INFO] Airavata GFac Grid Job Monitor ....................
> SUCCESS
> > > > > [2.168s]
> > > > > > > [INFO] Airavata GFac Local implementation ................
> SUCCESS
> > > > > [1.005s]
> > > > > > > [INFO] Airavata Orchestrator .............................
> SUCCESS
> > > > > [0.046s]
> > > > > > > [INFO] Airavata Orchestrator Core ........................
> SUCCESS
> > > > > [1.460s]
> > > > > > > [INFO] Airavata Orchestrator Service .....................
> SUCCESS
> > > > > [1.036s]
> > > > > > > [INFO] Airavata Workflow Model Parent ....................
> SUCCESS
> > > > > [0.023s]
> > > > > > > [INFO] Airavata Workflow Model Core ......................
> SUCCESS
> > > > > [0.469s]
> > > > > > > [INFO] Airavata Workflow Component .......................
> SUCCESS
> > > > > [0.547s]
> > > > > > > [INFO] Airavata WS Monitor ...............................
> SUCCESS
> > > > > [0.500s]
> > > > > > > [INFO] Airavata GFac EC2 Implementation ..................
> SUCCESS
> > > > > [0.638s]
> > > > > > > [INFO] Airavata Workflow Engine ..........................
> SUCCESS
> > > > > [0.770s]
> > > > > > > [INFO] Airavata API Server ...............................
> SUCCESS
> > > > > [0.762s]
> > > > > > > [INFO] Airavata Client SDKS ..............................
> SUCCESS
> > > > > [0.019s]
> > > > > > > [INFO] Apache Airavata PHP SDK ...........................
> SUCCESS
> > > > > [0.023s]
> > > > > > > [INFO] Airavata Client CPP SDK ...........................
> SUCCESS
> > > > > [0.045s]
> > > > > > > [INFO] Airavata Client Samples ...........................
> SUCCESS
> > > > > [0.101s]
> > > > > > > [INFO] Airavata Client ...................................
> SUCCESS
> > > > > [0.545s]
> > > > > > > [INFO] Airavata GFac Hadoop implementation ...............
> SUCCESS
> > > > > [1.878s]
> > > > > > > [INFO] Airavata GFac GRAM implementation .................
> SUCCESS
> > > > > [0.472s]
> > > > > > > [INFO] Airavata GFac BES implementation ..................
> SUCCESS
> > > > > [1.400s]
> > > > > > > [INFO] Airavata Security Implementation ..................
> SUCCESS
> > > > > [0.221s]
> > > > > > > [INFO] Airavata Credential Store Service .................
> SUCCESS
> > > > > [0.018s]
> > > > > > > [INFO] airavata-credential-store-webapp ..................
> SUCCESS
> > > > > [0.359s]
> > > > > > > [INFO] Airavata Orchestrator Client SDK ..................
> SUCCESS
> > > > > [0.390s]
> > > > > > > [INFO] Airavata Tools ....................................
> SUCCESS
> > > > > [0.020s]
> > > > > > > [INFO] registry-tool .....................................
> SUCCESS
> > > > > [0.052s]
> > > > > > > [INFO] Airavata Standalone Server ........................
> SUCCESS
> > > > > [0.493s]
> > > > > > > [INFO] Airavata Test Suite ...............................
> SUCCESS
> > > > > [0.576s]
> > > > > > > [INFO] distribution ......................................
> SUCCESS
> > > > > [0.044s]
> > > > > > > [INFO] Airavata server distribution ......................
> SUCCESS
> > > > > [1.686s]
> > > > > > > [INFO] Airavata Client Distribution Parent ...............
> SUCCESS
> > > > > [0.022s]
> > > > > > > [INFO] Airavata Client Java Distribution .................
> SUCCESS
> > > > > [0.522s]
> > > > > > > [INFO] Airavata release artifacts ........................
> SUCCESS
> > > > > [0.035s]
> > > > > > > [INFO] Airavata Integration Tests ........................
> SUCCESS
> > > > > [0.695s]
> > > > > > > [INFO] Airavata XBaya ....................................
> SUCCESS
> > > > > [0.680s]
> > > > > > > [INFO]
> > > > > > >
> > > > >
> > >
> ------------------------------------------------------------------------
> > > > > > > [INFO] BUILD SUCCESS
> > > > > > > [INFO]
> > > > > > >
> > > > >
> > >
> ------------------------------------------------------------------------
> > > > > > > [INFO] Total time: 38.665s
> > > > > > > [INFO] Finished at: Thu Oct 23 14:20:59 PDT 2014
> > > > > > > [INFO] Final Memory: 45M/273M
> > > > > > > [INFO]
> > > > > > >
> > > > >
> > >
> ------------------------------------------------------------------------
> > > > > > >
> > > > > > >
> > > > > > >
> > > > > > > On Thu, Oct 23, 2014 at 01:26:57PM -0700, K Yoshimoto wrote:
> > > > > > > >
> > > > > > > > Shameera,
> > > > > > > >
> > > > > > > >  Thanks for the info.  I did not do the mvn eclipse:eclipse.
> > > > > > > > I'll update my repo, then do mvn eclipse:eclipse and
> delete/load
> > > > > > > > XBaya.  I'll update if it works or if I run into something
> else.
> > > > > > > >
> > > > > > > > Kenneth
> > > > > > > >
> > > > > > > > On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka
> > > wrote:
> > > > > > > > > Hi Yoshimoto,
> > > > > > > > >
> > > > > > > > > I just try to build the latest trunk and i don't see any
> > > > > compilation
> > > > > > > error.
> > > > > > > > > To narrow down the issue, I have few questions for you.
> > > > > > > > > 1. are you working on latest trunk or previous released
> > > version?
> > > > > if it
> > > > > > > is
> > > > > > > > > trunk make sure you have latest revision. if it is previous
> > > > > version,
> > > > > > > which
> > > > > > > > > version you are using?
> > > > > > > > > 2. Could you able to build the source code using "mvn clean
> > > > > install"
> > > > > > > > > without any issue?
> > > > > > > > > 3. Did you run mvn eclispse:eclipse command before you
> open the
> > > > > project
> > > > > > > > > from eclipse?
> > > > > > > > >
> > > > > > > > > According to the error stack it seems eclipse project
> doesn't
> > > has
> > > > > all
> > > > > > > > > required jar in class path."mvn eclipse:eclipse" will solve
> > > this
> > > > > issue
> > > > > > > but
> > > > > > > > > to effect the changes, delete the airavata eclipse project
> and
> > > > > reopen
> > > > > > > the
> > > > > > > > > source code as new project, in other ward reload the
> eclipse
> > > > > project.
> > > > > > > Now
> > > > > > > > > try to run the XBaya class.
> > > > > > > > >
> > > > > > > > > I am waiting for you answers to my above questions, please
> let
> > > me
> > > > > know
> > > > > > > if
> > > > > > > > > you hit any issue down the path.
> > > > > > > > >
> > > > > > > > > Thanks,
> > > > > > > > > Shameera.
> > > > > > > > >
> > > > > > > > > On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <
> kenneth@sdsc.edu
> > > >
> > > > > wrote:
> > > > > > > > >
> > > > > > > > > >
> > > > > > > > > > Hi,
> > > > > > > > > >
> > > > > > > > > >  I am trying to start up the XBaya GUI from Eclipse, but
> get
> > > > > > > > > > an error about missing type ErrorWindow.  Has anyone seen
> > > this?
> > > > > > > > > > Where is ErrorWindow supposed to come from?
> > > > > > > > > >
> > > > > > > > > > SLF4J: Class path contains multiple SLF4J bindings.
> > > > > > > > > > SLF4J: Found binding in
> > > > > > > > > >
> > > > > > >
> > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > > > SLF4J: Found binding in
> > > > > > > > > >
> > > > > > >
> > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > > > SLF4J: Found binding in
> > > > > > > > > >
> > > > > > >
> > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > > > SLF4J: Found binding in
> > > > > > > > > >
> > > > > > >
> > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > > > SLF4J: See
> http://www.slf4j.org/codes.html#multiple_bindings
> > > > > for an
> > > > > > > > > > explanation.
> > > > > > > > > > SLF4J: Actual binding is of type
> > > > > [org.slf4j.impl.Log4jLoggerFactory]
> > > > > > > > > > Exception in thread "main" java.lang.Error: Unresolved
> > > > > compilation
> > > > > > > > > > problems:
> > > > > > > > > >         The method getErrorWindow() from the type
> XBayaGUI
> > > > > refers to
> > > > > > > the
> > > > > > > > > > missing type ErrorWindow
> > > > > > > > > >         The method getErrorWindow() from the type
> XBayaGUI
> > > > > refers to
> > > > > > > the
> > > > > > > > > > missing type ErrorWindow
> > > > > > > > > >
> > > > > > > > > >         at
> > > org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
> > > > > > > > > >         at
> > > org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
> > > > > > > > > >
> > > > > > > > > > Thanks,
> > > > > > > > > > Kenneth
> > > > > > > > > >
> > > > > > > > > > On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara
> premadasa
> > > wrote:
> > > > > > > > > > > Hi Kenneth,
> > > > > > > > > > >
> > > > > > > > > > > I have attached a sample guide on how to run a simple
> > > workflow
> > > > > with
> > > > > > > > > > > Airavata in the thread 'Unable to start Airavata after
> the
> > > > > source
> > > > > > > build'
> > > > > > > > > > .
> > > > > > > > > > > I think you can refer to that till the Quickstart
> > > tutorials are
> > > > > > > > > > officially
> > > > > > > > > > > online.
> > > > > > > > > > >
> > > > > > > > > > > In order to answer you question, the XBaya GUI binary
> > > > > distribution
> > > > > > > is not
> > > > > > > > > > > yet present in the trunk. Therefore at present XBaya
> GUI
> > > can't
> > > > > be
> > > > > > > started
> > > > > > > > > > > by extracting XBaya GUI archive. Instead the GUI
> client is
> > > > > started
> > > > > > > by
> > > > > > > > > > > directly running org.apache.airavata.xbaya.XBaya class
> > > through
> > > > > an
> > > > > > > IDE.
> > > > > > > > > > >
> > > > > > > > > > > Hope this helps.
> > > > > > > > > > >
> > > > > > > > > > > Thanks!
> > > > > > > > > > > Ishara
> > > > > > > > > > >
> > > > > > > > > > > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <
> > > kenneth@sdsc.edu
> > > > > >
> > > > > > > wrote:
> > > > > > > > > > >
> > > > > > > > > > > >
> > > > > > > > > > > > Thanks, Suresh.  I'll keep an eye on the dev list to
> see
> > > when
> > > > > > > > > > > > things are more up-to-date.  If you notice things are
> > > ready,
> > > > > > > > > > > > could you ping me also?
> > > > > > > > > > > >
> > > > > > > > > > > > Kenneth
> > > > > > > > > > > >
> > > > > > > > > > > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh
> Marru
> > > wrote:
> > > > > > > > > > > > > Hi Kenneth,
> > > > > > > > > > > > >
> > > > > > > > > > > > > Sorry the tutorials are out of date and we are
> trying
> > > to
> > > > > fix
> > > > > > > them
> > > > > > > > > > with
> > > > > > > > > > > > the 0.14 release.
> > > > > > > > > > > > >
> > > > > > > > > > > > > Shameera is close to bring these tutorials back
> online,
> > > > > some
> > > > > > > > > > discussion
> > > > > > > > > > > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > > > > > > > > > > >
> > > > > > > > > > > > > Suresh
> > > > > > > > > > > > >
> > > > > > > > > > > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <
> > > kenneth@sdsc.edu
> > > > > >
> > > > > > > wrote:
> > > > > > > > > > > > >
> > > > > > > > > > > > > >
> > > > > > > > > > > > > > I'm playing with airavata 0.14.  I am going
> through
> > > some
> > > > > of
> > > > > > > the
> > > > > > > > > > > > > > quickstart tutorials:
> > > > > > > > > > > > > >
> > > > > > >
> http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > > > > > > > > > > >
> > > > > > > > > > > > > > I'm at the step of firing up xbaya-gui, but I'm
> not
> > > > > seeing
> > > > > > > > > > > > > > an obvious release distribution for it.  Is it
> > > somewhere
> > > > > > > > > > > > > > else in the tree?  I was looking in
> > > release-artifacts,
> > > > > but
> > > > > > > > > > > > > > only see:
> > > > > > > > > > > > > >
> > > > > > > > > > > > > > release-artifacts$ ls
> > > > > > > > > > > > > >
> > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > > >
> apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > > > >
> > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > > >
> apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > > > >
> > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > > >
> apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > > > >
> > > > > > > > > > > > > > Should I look someplace else?  Did I miss a build
> > > step?
> > > > > > > > > > > > > >
> > > > > > > > > > > > > > Kenneth
> > > > > > > > > > > > > >
> > > > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > > > --
> > > > > > > > > > > *Best Regards.*
> > > > > > > > > > >
> > > > > > > > > > > *Ishara Premadasa,*
> > > > > > > > > > > http://isharapremadasa.blogspot.com
> > > > > > > > > >
> > > > > > > > >
> > > > > > > > >
> > > > > > > > >
> > > > > > > > > --
> > > > > > > > > Best Regards,
> > > > > > > > > Shameera Rathnayaka.
> > > > > > > > >
> > > > > > > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > > > > > > Blog : http://shameerarathnayaka.blogspot.com/
> > > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > > --
> > > > > > Best Regards,
> > > > > > Shameera Rathnayaka.
> > > > > >
> > > > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > > > Blog : http://shameerarathnayaka.blogspot.com/
> > > > >
> > > >
> > > >
> > > >
> > > > --
> > > > Best Regards,
> > > > Shameera Rathnayaka.
> > > >
> > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > Blog : http://shameerarathnayaka.blogspot.com/
> > >
>

Re: xbaya-gui distribution?

Posted by K Yoshimoto <ke...@sdsc.edu>.
Thanks for the hint!  That log seems to be saying the experiment has
completed, but mvn clean install is hung.  I wonder if I should be
using the 0.13 binary distribution.  Has the API changed since then?

...
nitor.AiravataWorkflowNodeStatusUpdator  - Updating workflow node status for IDontNeedaNode_45178f88-6fe4-4aa7-b850-b9892c028a18:COMPLETED
2014-10-29 11:58:36,936 [pool-6-thread-1] INFO  org.apache.airavata.api.server.listener.AiravataExperimentStatusUpdator  - Updating the experiment status of experiment: echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 to EXECUTING
2014-10-29 11:58:36,956 [pool-6-thread-1] INFO  org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Gfac internal state changed to: COMPLETED
2014-10-29 11:58:36,960 [pool-6-thread-1] INFO  org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Experiment Completed, So removing the ZK entry for the experimentechoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4
2014-10-29 11:58:36,960 [pool-6-thread-1] INFO  org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Zookeeper experiment Path: /gfac-experiments/gfac-node0/echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4+IDontNeedaNode_0dfc2c7e-a99e-4520-af9e-74f1b1888566

On Wed, Oct 29, 2014 at 03:59:53PM -0400, Chathuri Wimalasena wrote:
> Hi Kenneth,
> 
> You can go to
> modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/bin/
> and check airavata.log file. It will show you if something went wrong while
> executing the experiment.
> 
> Thanks.
> Chathuri
> 
> 
> 
> On Wed, Oct 29, 2014 at 3:27 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> 
> >
> > Looks like my classpath has version 1.7.2, rather than 1.7.6.
> > I was trying a new git pull, mvn clean install to try to see
> > where I'm getting the bad path.  My mvn clean install is hanging
> > trying to run an experiment.  Is the big refactoring making things
> > unstable right now?
> >
> > mvn clean install
> > ...
> > [INFO] Running job in localhost
> > [INFO] ========================
> > [INFO] Adding applications...
> > [INFO] Creating experiment...
> > [INFO] Experiment Id returned :
> > echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4
> > [INFO] Experiment launched successfully
> >
> > [INFO] Monitoring job in localhost
> > [INFO] ===========================
> > [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : CREATED [Wed
> > Oct 29 11:58:31 PDT 2014]
> > [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : LAUNCHED [Wed
> > Oct 29 11:58:33 PDT 2014]
> > [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : EXECUTING
> > [Wed Oct 29 11:58:36 PDT 2014]
> >
> >
> >
> > On Fri, Oct 24, 2014 at 09:46:59PM -0400, Shameera Rathnayaka wrote:
> > > Hi Kenneth,
> > >
> > > Check that slf4j-api-1.7.6.jar is in your class path? if not add it to
> > the
> > > class path, normally this should be added to class path when we run "mvn
> > > clean install"(download the jar) and "mvn eclipse:eclipse" (Added jar to
> > > the project classpath). not sure why that is not in classpath.
> > >
> > > Yes, that warning can be ignored.
> > >
> > > Thanks,
> > > Shameera.
> > >
> > > On Fri, Oct 24, 2014 at 7:07 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > >
> > > >
> > > > Thanks for the hints, Shameera.
> > > > I'm not seeing red libraries or other errors in the run configurations
> > > > or build path.
> > > >
> > > > I'm seeing this error now:
> > > > Exception in thread "main" java.lang.NoClassDefFoundError:
> > > > org/slf4j/LoggerFactory
> > > >         at org.apache.airavata.xbaya.XBaya.<clinit>(XBaya.java:35)
> > > > Caused by: java.lang.ClassNotFoundException: org.slf4j.LoggerFactory
> > > >         at java.net.URLClassLoader$1.run(URLClassLoader.java:217)
> > > >         at java.security.AccessController.doPrivileged(Native Method)
> > > >         at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
> > > >         at java.lang.ClassLoader.loadClass(ClassLoader.java:323)
> > > >         at
> > sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
> > > >         at java.lang.ClassLoader.loadClass(ClassLoader.java:268)
> > > >         ... 1 more
> > > > Could not find the main class: org.apache.airavata.xbaya.XBaya. Program
> > > > will exit.
> > > >
> > > > From mvn clean install, I do get this warning:
> > > >
> > > > Tests run: 1, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.031
> > sec
> > > > Running org.apache.airavata.security.userstore.JDBCUserStoreTest
> > > > SLF4J: Class path contains multiple SLF4J bindings.
> > > > SLF4J: Found binding in
> > > >
> > [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-log4j12/1.7.6/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > SLF4J: Found binding in
> > > >
> > [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-simple/1.7.6/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
> > > > explanation.
> > > > SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
> > > > log4j:WARN No appenders could be found for logger
> > > > (org.apache.airavata.security.util.PasswordDigester).
> > > > log4j:WARN Please initialize the log4j system properly.
> > > > log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig
> > for
> > > > more info.
> > > > Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 57.169
> > sec
> > > > Running org.apache.airavata.security.userstore.SessionDBUserStoreTest
> > > >
> > > > Is the warning ignorable, or could this be causing a failure to find
> > main?
> > > >
> > > > Kenneth
> > > >
> > > > On Thu, Oct 23, 2014 at 08:32:47PM -0400, Shameera Rathnayaka wrote:
> > > > > Hi Kenneth,
> > > > >
> > > > > I am not much familiar with eclipse. But after googling the above
> > issue
> > > > > found following will help you to resolve classpath issue.
> > > > >
> > > > > 1) Run Configurations
> > > > >
> > > > >    - Right click on your project
> > > > >       - then click "Run" -> "Run Configurations..."
> > > > >       - there check your settings for you project
> > > > >       - here look into you tab "Classpath" under "User Entries"
> > > > >
> > > > > 2) Project classpath
> > > > >
> > > > >    - Right click on your project -> "Properties" -> "Java Build Path"
> > > > >       - now check the "Source" Tab as well as your "Libraries" Tab
> > > > >       - Problems should be marked red in the "Libraries" tab
> > > > >
> > > > > Thanks,
> > > > > Shameera.
> > > > >
> > > > > On Thu, Oct 23, 2014 at 5:45 PM, K Yoshimoto <ke...@sdsc.edu>
> > wrote:
> > > > >
> > > > > >
> > > > > > I did
> > > > > > git pull
> > > > > > mvn clean install
> > > > > > mvn eclipse:clean
> > > > > > mvn eclipse:eclipse
> > > > > >
> > > > > > I am getting an error when trying to run XBaya from Eclipse:
> > > > > > "The project: airavata-workflow-model-core which is referenced by
> > the
> > > > > > classpath, does not exist."
> > > > > >
> > > > > > Maybe I have some garbage left over in my config somewhere?  Or is
> > > > > > airavata-workflow-model-core supposed to be there?
> > > > > >
> > > > > > I think mvn eclipse:eclipse worked:
> > > > > > ...
> > > > > > [INFO]
> > > > > > [INFO] <<< maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > > > > airavata-xbaya-gui <<<
> > > > > > [INFO]
> > > > > > [INFO] --- maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > > > > airavata-xbaya-gui ---
> > > > > > [INFO] Using Eclipse Workspace: null
> > > > > > [INFO] Adding default classpath container:
> > > > > > org.eclipse.jdt.launching.JRE_CONTAINER
> > > > > > [INFO] Wrote Eclipse project for "airavata-xbaya-gui" to
> > > > > > /media/scigap/scigap/javaclient/airavata/modules/xbaya-gui.
> > > > > > [INFO]
> > > > > > [INFO]
> > > > > >
> > > >
> > ------------------------------------------------------------------------
> > > > > > [INFO] Reactor Summary:
> > > > > > [INFO]
> > > > > > [INFO] Airavata .......................................... SUCCESS
> > > > [1.564s]
> > > > > > [INFO] Airavata Configuration ............................ SUCCESS
> > > > [0.042s]
> > > > > > [INFO] Airavata Server Configuration ..................... SUCCESS
> > > > [0.065s]
> > > > > > [INFO] Airavata Client Configuration ..................... SUCCESS
> > > > [0.060s]
> > > > > > [INFO] Airavata API ...................................... SUCCESS
> > > > [0.086s]
> > > > > > [INFO] Airavata Data Models .............................. SUCCESS
> > > > [0.488s]
> > > > > > [INFO] Airavata Generated Stubs Skeltons ................. SUCCESS
> > > > [0.211s]
> > > > > > [INFO] Airavata Model Utilities .......................... SUCCESS
> > > > [0.157s]
> > > > > > [INFO] Airavata Commons .................................. SUCCESS
> > > > [0.063s]
> > > > > > [INFO] Airavata Common Utilities ......................... SUCCESS
> > > > [2.065s]
> > > > > > [INFO] Airavata GFac Schema Utilities .................... SUCCESS
> > > > [1.323s]
> > > > > > [INFO] Airavata Credential Store ......................... SUCCESS
> > > > [1.085s]
> > > > > > [INFO] Airavata Registry ................................. SUCCESS
> > > > [0.026s]
> > > > > > [INFO] Airavata Registry CPI ............................. SUCCESS
> > > > [0.353s]
> > > > > > [INFO] Airavata JPA Registry ............................. SUCCESS
> > > > [1.008s]
> > > > > > [INFO] Airavata Application Catalog ...................... SUCCESS
> > > > [0.063s]
> > > > > > [INFO] Airavata Application Catalog CPI .................. SUCCESS
> > > > [0.532s]
> > > > > > [INFO] Airavata Application Catalog Data ................. SUCCESS
> > > > [0.544s]
> > > > > > [INFO] Airavata Workflow Execution Context ............... SUCCESS
> > > > [0.598s]
> > > > > > [INFO] Airavata WS Messenger ............................. SUCCESS
> > > > [0.054s]
> > > > > > [INFO] Airavata Messenger Commons ........................ SUCCESS
> > > > [0.863s]
> > > > > > [INFO] Airavata Messenger Client ......................... SUCCESS
> > > > [0.690s]
> > > > > > [INFO] Airavata Workflow Tracking ........................ SUCCESS
> > > > [0.817s]
> > > > > > [INFO] Airavata Messaging Framework ...................... SUCCESS
> > > > [0.022s]
> > > > > > [INFO] Airavata Messaging Framework Core ................. SUCCESS
> > > > [0.365s]
> > > > > > [INFO] Airavata GFac ..................................... SUCCESS
> > > > [0.021s]
> > > > > > [INFO] Airavata GFac Core ................................ SUCCESS
> > > > [0.542s]
> > > > > > [INFO] Airavata Gfac Service ............................. SUCCESS
> > > > [0.705s]
> > > > > > [INFO] GSISSH Library .................................... SUCCESS
> > > > [0.282s]
> > > > > > [INFO] Airavata GFac GSI-SSH implementation .............. SUCCESS
> > > > [0.575s]
> > > > > > [INFO] Airavata GFac SSH implementation .................. SUCCESS
> > > > [0.737s]
> > > > > > [INFO] Airavata GFac Grid Job Monitor .................... SUCCESS
> > > > [2.168s]
> > > > > > [INFO] Airavata GFac Local implementation ................ SUCCESS
> > > > [1.005s]
> > > > > > [INFO] Airavata Orchestrator ............................. SUCCESS
> > > > [0.046s]
> > > > > > [INFO] Airavata Orchestrator Core ........................ SUCCESS
> > > > [1.460s]
> > > > > > [INFO] Airavata Orchestrator Service ..................... SUCCESS
> > > > [1.036s]
> > > > > > [INFO] Airavata Workflow Model Parent .................... SUCCESS
> > > > [0.023s]
> > > > > > [INFO] Airavata Workflow Model Core ...................... SUCCESS
> > > > [0.469s]
> > > > > > [INFO] Airavata Workflow Component ....................... SUCCESS
> > > > [0.547s]
> > > > > > [INFO] Airavata WS Monitor ............................... SUCCESS
> > > > [0.500s]
> > > > > > [INFO] Airavata GFac EC2 Implementation .................. SUCCESS
> > > > [0.638s]
> > > > > > [INFO] Airavata Workflow Engine .......................... SUCCESS
> > > > [0.770s]
> > > > > > [INFO] Airavata API Server ............................... SUCCESS
> > > > [0.762s]
> > > > > > [INFO] Airavata Client SDKS .............................. SUCCESS
> > > > [0.019s]
> > > > > > [INFO] Apache Airavata PHP SDK ........................... SUCCESS
> > > > [0.023s]
> > > > > > [INFO] Airavata Client CPP SDK ........................... SUCCESS
> > > > [0.045s]
> > > > > > [INFO] Airavata Client Samples ........................... SUCCESS
> > > > [0.101s]
> > > > > > [INFO] Airavata Client ................................... SUCCESS
> > > > [0.545s]
> > > > > > [INFO] Airavata GFac Hadoop implementation ............... SUCCESS
> > > > [1.878s]
> > > > > > [INFO] Airavata GFac GRAM implementation ................. SUCCESS
> > > > [0.472s]
> > > > > > [INFO] Airavata GFac BES implementation .................. SUCCESS
> > > > [1.400s]
> > > > > > [INFO] Airavata Security Implementation .................. SUCCESS
> > > > [0.221s]
> > > > > > [INFO] Airavata Credential Store Service ................. SUCCESS
> > > > [0.018s]
> > > > > > [INFO] airavata-credential-store-webapp .................. SUCCESS
> > > > [0.359s]
> > > > > > [INFO] Airavata Orchestrator Client SDK .................. SUCCESS
> > > > [0.390s]
> > > > > > [INFO] Airavata Tools .................................... SUCCESS
> > > > [0.020s]
> > > > > > [INFO] registry-tool ..................................... SUCCESS
> > > > [0.052s]
> > > > > > [INFO] Airavata Standalone Server ........................ SUCCESS
> > > > [0.493s]
> > > > > > [INFO] Airavata Test Suite ............................... SUCCESS
> > > > [0.576s]
> > > > > > [INFO] distribution ...................................... SUCCESS
> > > > [0.044s]
> > > > > > [INFO] Airavata server distribution ...................... SUCCESS
> > > > [1.686s]
> > > > > > [INFO] Airavata Client Distribution Parent ............... SUCCESS
> > > > [0.022s]
> > > > > > [INFO] Airavata Client Java Distribution ................. SUCCESS
> > > > [0.522s]
> > > > > > [INFO] Airavata release artifacts ........................ SUCCESS
> > > > [0.035s]
> > > > > > [INFO] Airavata Integration Tests ........................ SUCCESS
> > > > [0.695s]
> > > > > > [INFO] Airavata XBaya .................................... SUCCESS
> > > > [0.680s]
> > > > > > [INFO]
> > > > > >
> > > >
> > ------------------------------------------------------------------------
> > > > > > [INFO] BUILD SUCCESS
> > > > > > [INFO]
> > > > > >
> > > >
> > ------------------------------------------------------------------------
> > > > > > [INFO] Total time: 38.665s
> > > > > > [INFO] Finished at: Thu Oct 23 14:20:59 PDT 2014
> > > > > > [INFO] Final Memory: 45M/273M
> > > > > > [INFO]
> > > > > >
> > > >
> > ------------------------------------------------------------------------
> > > > > >
> > > > > >
> > > > > >
> > > > > > On Thu, Oct 23, 2014 at 01:26:57PM -0700, K Yoshimoto wrote:
> > > > > > >
> > > > > > > Shameera,
> > > > > > >
> > > > > > >  Thanks for the info.  I did not do the mvn eclipse:eclipse.
> > > > > > > I'll update my repo, then do mvn eclipse:eclipse and delete/load
> > > > > > > XBaya.  I'll update if it works or if I run into something else.
> > > > > > >
> > > > > > > Kenneth
> > > > > > >
> > > > > > > On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka
> > wrote:
> > > > > > > > Hi Yoshimoto,
> > > > > > > >
> > > > > > > > I just try to build the latest trunk and i don't see any
> > > > compilation
> > > > > > error.
> > > > > > > > To narrow down the issue, I have few questions for you.
> > > > > > > > 1. are you working on latest trunk or previous released
> > version?
> > > > if it
> > > > > > is
> > > > > > > > trunk make sure you have latest revision. if it is previous
> > > > version,
> > > > > > which
> > > > > > > > version you are using?
> > > > > > > > 2. Could you able to build the source code using "mvn clean
> > > > install"
> > > > > > > > without any issue?
> > > > > > > > 3. Did you run mvn eclispse:eclipse command before you open the
> > > > project
> > > > > > > > from eclipse?
> > > > > > > >
> > > > > > > > According to the error stack it seems eclipse project doesn't
> > has
> > > > all
> > > > > > > > required jar in class path."mvn eclipse:eclipse" will solve
> > this
> > > > issue
> > > > > > but
> > > > > > > > to effect the changes, delete the airavata eclipse project and
> > > > reopen
> > > > > > the
> > > > > > > > source code as new project, in other ward reload the eclipse
> > > > project.
> > > > > > Now
> > > > > > > > try to run the XBaya class.
> > > > > > > >
> > > > > > > > I am waiting for you answers to my above questions, please let
> > me
> > > > know
> > > > > > if
> > > > > > > > you hit any issue down the path.
> > > > > > > >
> > > > > > > > Thanks,
> > > > > > > > Shameera.
> > > > > > > >
> > > > > > > > On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <kenneth@sdsc.edu
> > >
> > > > wrote:
> > > > > > > >
> > > > > > > > >
> > > > > > > > > Hi,
> > > > > > > > >
> > > > > > > > >  I am trying to start up the XBaya GUI from Eclipse, but get
> > > > > > > > > an error about missing type ErrorWindow.  Has anyone seen
> > this?
> > > > > > > > > Where is ErrorWindow supposed to come from?
> > > > > > > > >
> > > > > > > > > SLF4J: Class path contains multiple SLF4J bindings.
> > > > > > > > > SLF4J: Found binding in
> > > > > > > > >
> > > > > >
> > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > > SLF4J: Found binding in
> > > > > > > > >
> > > > > >
> > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > > SLF4J: Found binding in
> > > > > > > > >
> > > > > >
> > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > > SLF4J: Found binding in
> > > > > > > > >
> > > > > >
> > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings
> > > > for an
> > > > > > > > > explanation.
> > > > > > > > > SLF4J: Actual binding is of type
> > > > [org.slf4j.impl.Log4jLoggerFactory]
> > > > > > > > > Exception in thread "main" java.lang.Error: Unresolved
> > > > compilation
> > > > > > > > > problems:
> > > > > > > > >         The method getErrorWindow() from the type XBayaGUI
> > > > refers to
> > > > > > the
> > > > > > > > > missing type ErrorWindow
> > > > > > > > >         The method getErrorWindow() from the type XBayaGUI
> > > > refers to
> > > > > > the
> > > > > > > > > missing type ErrorWindow
> > > > > > > > >
> > > > > > > > >         at
> > org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
> > > > > > > > >         at
> > org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
> > > > > > > > >
> > > > > > > > > Thanks,
> > > > > > > > > Kenneth
> > > > > > > > >
> > > > > > > > > On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa
> > wrote:
> > > > > > > > > > Hi Kenneth,
> > > > > > > > > >
> > > > > > > > > > I have attached a sample guide on how to run a simple
> > workflow
> > > > with
> > > > > > > > > > Airavata in the thread 'Unable to start Airavata after the
> > > > source
> > > > > > build'
> > > > > > > > > .
> > > > > > > > > > I think you can refer to that till the Quickstart
> > tutorials are
> > > > > > > > > officially
> > > > > > > > > > online.
> > > > > > > > > >
> > > > > > > > > > In order to answer you question, the XBaya GUI binary
> > > > distribution
> > > > > > is not
> > > > > > > > > > yet present in the trunk. Therefore at present XBaya GUI
> > can't
> > > > be
> > > > > > started
> > > > > > > > > > by extracting XBaya GUI archive. Instead the GUI client is
> > > > started
> > > > > > by
> > > > > > > > > > directly running org.apache.airavata.xbaya.XBaya class
> > through
> > > > an
> > > > > > IDE.
> > > > > > > > > >
> > > > > > > > > > Hope this helps.
> > > > > > > > > >
> > > > > > > > > > Thanks!
> > > > > > > > > > Ishara
> > > > > > > > > >
> > > > > > > > > > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <
> > kenneth@sdsc.edu
> > > > >
> > > > > > wrote:
> > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > > > Thanks, Suresh.  I'll keep an eye on the dev list to see
> > when
> > > > > > > > > > > things are more up-to-date.  If you notice things are
> > ready,
> > > > > > > > > > > could you ping me also?
> > > > > > > > > > >
> > > > > > > > > > > Kenneth
> > > > > > > > > > >
> > > > > > > > > > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru
> > wrote:
> > > > > > > > > > > > Hi Kenneth,
> > > > > > > > > > > >
> > > > > > > > > > > > Sorry the tutorials are out of date and we are trying
> > to
> > > > fix
> > > > > > them
> > > > > > > > > with
> > > > > > > > > > > the 0.14 release.
> > > > > > > > > > > >
> > > > > > > > > > > > Shameera is close to bring these tutorials back online,
> > > > some
> > > > > > > > > discussion
> > > > > > > > > > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > > > > > > > > > >
> > > > > > > > > > > > Suresh
> > > > > > > > > > > >
> > > > > > > > > > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <
> > kenneth@sdsc.edu
> > > > >
> > > > > > wrote:
> > > > > > > > > > > >
> > > > > > > > > > > > >
> > > > > > > > > > > > > I'm playing with airavata 0.14.  I am going through
> > some
> > > > of
> > > > > > the
> > > > > > > > > > > > > quickstart tutorials:
> > > > > > > > > > > > >
> > > > > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > > > > > > > > > >
> > > > > > > > > > > > > I'm at the step of firing up xbaya-gui, but I'm not
> > > > seeing
> > > > > > > > > > > > > an obvious release distribution for it.  Is it
> > somewhere
> > > > > > > > > > > > > else in the tree?  I was looking in
> > release-artifacts,
> > > > but
> > > > > > > > > > > > > only see:
> > > > > > > > > > > > >
> > > > > > > > > > > > > release-artifacts$ ls
> > > > > > > > > > > > >
> > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > > >
> > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > > >
> > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > > >
> > > > > > > > > > > > > Should I look someplace else?  Did I miss a build
> > step?
> > > > > > > > > > > > >
> > > > > > > > > > > > > Kenneth
> > > > > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > >
> > > > > > > > > >
> > > > > > > > > >
> > > > > > > > > > --
> > > > > > > > > > *Best Regards.*
> > > > > > > > > >
> > > > > > > > > > *Ishara Premadasa,*
> > > > > > > > > > http://isharapremadasa.blogspot.com
> > > > > > > > >
> > > > > > > >
> > > > > > > >
> > > > > > > >
> > > > > > > > --
> > > > > > > > Best Regards,
> > > > > > > > Shameera Rathnayaka.
> > > > > > > >
> > > > > > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > > > > > Blog : http://shameerarathnayaka.blogspot.com/
> > > > > >
> > > > >
> > > > >
> > > > >
> > > > > --
> > > > > Best Regards,
> > > > > Shameera Rathnayaka.
> > > > >
> > > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > > Blog : http://shameerarathnayaka.blogspot.com/
> > > >
> > >
> > >
> > >
> > > --
> > > Best Regards,
> > > Shameera Rathnayaka.
> > >
> > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > Blog : http://shameerarathnayaka.blogspot.com/
> >

Re: xbaya-gui distribution?

Posted by Chathuri Wimalasena <ka...@gmail.com>.
Hi Kenneth,

You can go to
modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/bin/
and check airavata.log file. It will show you if something went wrong while
executing the experiment.

Thanks.
Chathuri



On Wed, Oct 29, 2014 at 3:27 PM, K Yoshimoto <ke...@sdsc.edu> wrote:

>
> Looks like my classpath has version 1.7.2, rather than 1.7.6.
> I was trying a new git pull, mvn clean install to try to see
> where I'm getting the bad path.  My mvn clean install is hanging
> trying to run an experiment.  Is the big refactoring making things
> unstable right now?
>
> mvn clean install
> ...
> [INFO] Running job in localhost
> [INFO] ========================
> [INFO] Adding applications...
> [INFO] Creating experiment...
> [INFO] Experiment Id returned :
> echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4
> [INFO] Experiment launched successfully
>
> [INFO] Monitoring job in localhost
> [INFO] ===========================
> [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : CREATED [Wed
> Oct 29 11:58:31 PDT 2014]
> [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : LAUNCHED [Wed
> Oct 29 11:58:33 PDT 2014]
> [INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : EXECUTING
> [Wed Oct 29 11:58:36 PDT 2014]
>
>
>
> On Fri, Oct 24, 2014 at 09:46:59PM -0400, Shameera Rathnayaka wrote:
> > Hi Kenneth,
> >
> > Check that slf4j-api-1.7.6.jar is in your class path? if not add it to
> the
> > class path, normally this should be added to class path when we run "mvn
> > clean install"(download the jar) and "mvn eclipse:eclipse" (Added jar to
> > the project classpath). not sure why that is not in classpath.
> >
> > Yes, that warning can be ignored.
> >
> > Thanks,
> > Shameera.
> >
> > On Fri, Oct 24, 2014 at 7:07 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> >
> > >
> > > Thanks for the hints, Shameera.
> > > I'm not seeing red libraries or other errors in the run configurations
> > > or build path.
> > >
> > > I'm seeing this error now:
> > > Exception in thread "main" java.lang.NoClassDefFoundError:
> > > org/slf4j/LoggerFactory
> > >         at org.apache.airavata.xbaya.XBaya.<clinit>(XBaya.java:35)
> > > Caused by: java.lang.ClassNotFoundException: org.slf4j.LoggerFactory
> > >         at java.net.URLClassLoader$1.run(URLClassLoader.java:217)
> > >         at java.security.AccessController.doPrivileged(Native Method)
> > >         at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
> > >         at java.lang.ClassLoader.loadClass(ClassLoader.java:323)
> > >         at
> sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
> > >         at java.lang.ClassLoader.loadClass(ClassLoader.java:268)
> > >         ... 1 more
> > > Could not find the main class: org.apache.airavata.xbaya.XBaya. Program
> > > will exit.
> > >
> > > From mvn clean install, I do get this warning:
> > >
> > > Tests run: 1, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.031
> sec
> > > Running org.apache.airavata.security.userstore.JDBCUserStoreTest
> > > SLF4J: Class path contains multiple SLF4J bindings.
> > > SLF4J: Found binding in
> > >
> [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-log4j12/1.7.6/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > SLF4J: Found binding in
> > >
> [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-simple/1.7.6/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
> > > explanation.
> > > SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
> > > log4j:WARN No appenders could be found for logger
> > > (org.apache.airavata.security.util.PasswordDigester).
> > > log4j:WARN Please initialize the log4j system properly.
> > > log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig
> for
> > > more info.
> > > Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 57.169
> sec
> > > Running org.apache.airavata.security.userstore.SessionDBUserStoreTest
> > >
> > > Is the warning ignorable, or could this be causing a failure to find
> main?
> > >
> > > Kenneth
> > >
> > > On Thu, Oct 23, 2014 at 08:32:47PM -0400, Shameera Rathnayaka wrote:
> > > > Hi Kenneth,
> > > >
> > > > I am not much familiar with eclipse. But after googling the above
> issue
> > > > found following will help you to resolve classpath issue.
> > > >
> > > > 1) Run Configurations
> > > >
> > > >    - Right click on your project
> > > >       - then click "Run" -> "Run Configurations..."
> > > >       - there check your settings for you project
> > > >       - here look into you tab "Classpath" under "User Entries"
> > > >
> > > > 2) Project classpath
> > > >
> > > >    - Right click on your project -> "Properties" -> "Java Build Path"
> > > >       - now check the "Source" Tab as well as your "Libraries" Tab
> > > >       - Problems should be marked red in the "Libraries" tab
> > > >
> > > > Thanks,
> > > > Shameera.
> > > >
> > > > On Thu, Oct 23, 2014 at 5:45 PM, K Yoshimoto <ke...@sdsc.edu>
> wrote:
> > > >
> > > > >
> > > > > I did
> > > > > git pull
> > > > > mvn clean install
> > > > > mvn eclipse:clean
> > > > > mvn eclipse:eclipse
> > > > >
> > > > > I am getting an error when trying to run XBaya from Eclipse:
> > > > > "The project: airavata-workflow-model-core which is referenced by
> the
> > > > > classpath, does not exist."
> > > > >
> > > > > Maybe I have some garbage left over in my config somewhere?  Or is
> > > > > airavata-workflow-model-core supposed to be there?
> > > > >
> > > > > I think mvn eclipse:eclipse worked:
> > > > > ...
> > > > > [INFO]
> > > > > [INFO] <<< maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > > > airavata-xbaya-gui <<<
> > > > > [INFO]
> > > > > [INFO] --- maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > > > airavata-xbaya-gui ---
> > > > > [INFO] Using Eclipse Workspace: null
> > > > > [INFO] Adding default classpath container:
> > > > > org.eclipse.jdt.launching.JRE_CONTAINER
> > > > > [INFO] Wrote Eclipse project for "airavata-xbaya-gui" to
> > > > > /media/scigap/scigap/javaclient/airavata/modules/xbaya-gui.
> > > > > [INFO]
> > > > > [INFO]
> > > > >
> > >
> ------------------------------------------------------------------------
> > > > > [INFO] Reactor Summary:
> > > > > [INFO]
> > > > > [INFO] Airavata .......................................... SUCCESS
> > > [1.564s]
> > > > > [INFO] Airavata Configuration ............................ SUCCESS
> > > [0.042s]
> > > > > [INFO] Airavata Server Configuration ..................... SUCCESS
> > > [0.065s]
> > > > > [INFO] Airavata Client Configuration ..................... SUCCESS
> > > [0.060s]
> > > > > [INFO] Airavata API ...................................... SUCCESS
> > > [0.086s]
> > > > > [INFO] Airavata Data Models .............................. SUCCESS
> > > [0.488s]
> > > > > [INFO] Airavata Generated Stubs Skeltons ................. SUCCESS
> > > [0.211s]
> > > > > [INFO] Airavata Model Utilities .......................... SUCCESS
> > > [0.157s]
> > > > > [INFO] Airavata Commons .................................. SUCCESS
> > > [0.063s]
> > > > > [INFO] Airavata Common Utilities ......................... SUCCESS
> > > [2.065s]
> > > > > [INFO] Airavata GFac Schema Utilities .................... SUCCESS
> > > [1.323s]
> > > > > [INFO] Airavata Credential Store ......................... SUCCESS
> > > [1.085s]
> > > > > [INFO] Airavata Registry ................................. SUCCESS
> > > [0.026s]
> > > > > [INFO] Airavata Registry CPI ............................. SUCCESS
> > > [0.353s]
> > > > > [INFO] Airavata JPA Registry ............................. SUCCESS
> > > [1.008s]
> > > > > [INFO] Airavata Application Catalog ...................... SUCCESS
> > > [0.063s]
> > > > > [INFO] Airavata Application Catalog CPI .................. SUCCESS
> > > [0.532s]
> > > > > [INFO] Airavata Application Catalog Data ................. SUCCESS
> > > [0.544s]
> > > > > [INFO] Airavata Workflow Execution Context ............... SUCCESS
> > > [0.598s]
> > > > > [INFO] Airavata WS Messenger ............................. SUCCESS
> > > [0.054s]
> > > > > [INFO] Airavata Messenger Commons ........................ SUCCESS
> > > [0.863s]
> > > > > [INFO] Airavata Messenger Client ......................... SUCCESS
> > > [0.690s]
> > > > > [INFO] Airavata Workflow Tracking ........................ SUCCESS
> > > [0.817s]
> > > > > [INFO] Airavata Messaging Framework ...................... SUCCESS
> > > [0.022s]
> > > > > [INFO] Airavata Messaging Framework Core ................. SUCCESS
> > > [0.365s]
> > > > > [INFO] Airavata GFac ..................................... SUCCESS
> > > [0.021s]
> > > > > [INFO] Airavata GFac Core ................................ SUCCESS
> > > [0.542s]
> > > > > [INFO] Airavata Gfac Service ............................. SUCCESS
> > > [0.705s]
> > > > > [INFO] GSISSH Library .................................... SUCCESS
> > > [0.282s]
> > > > > [INFO] Airavata GFac GSI-SSH implementation .............. SUCCESS
> > > [0.575s]
> > > > > [INFO] Airavata GFac SSH implementation .................. SUCCESS
> > > [0.737s]
> > > > > [INFO] Airavata GFac Grid Job Monitor .................... SUCCESS
> > > [2.168s]
> > > > > [INFO] Airavata GFac Local implementation ................ SUCCESS
> > > [1.005s]
> > > > > [INFO] Airavata Orchestrator ............................. SUCCESS
> > > [0.046s]
> > > > > [INFO] Airavata Orchestrator Core ........................ SUCCESS
> > > [1.460s]
> > > > > [INFO] Airavata Orchestrator Service ..................... SUCCESS
> > > [1.036s]
> > > > > [INFO] Airavata Workflow Model Parent .................... SUCCESS
> > > [0.023s]
> > > > > [INFO] Airavata Workflow Model Core ...................... SUCCESS
> > > [0.469s]
> > > > > [INFO] Airavata Workflow Component ....................... SUCCESS
> > > [0.547s]
> > > > > [INFO] Airavata WS Monitor ............................... SUCCESS
> > > [0.500s]
> > > > > [INFO] Airavata GFac EC2 Implementation .................. SUCCESS
> > > [0.638s]
> > > > > [INFO] Airavata Workflow Engine .......................... SUCCESS
> > > [0.770s]
> > > > > [INFO] Airavata API Server ............................... SUCCESS
> > > [0.762s]
> > > > > [INFO] Airavata Client SDKS .............................. SUCCESS
> > > [0.019s]
> > > > > [INFO] Apache Airavata PHP SDK ........................... SUCCESS
> > > [0.023s]
> > > > > [INFO] Airavata Client CPP SDK ........................... SUCCESS
> > > [0.045s]
> > > > > [INFO] Airavata Client Samples ........................... SUCCESS
> > > [0.101s]
> > > > > [INFO] Airavata Client ................................... SUCCESS
> > > [0.545s]
> > > > > [INFO] Airavata GFac Hadoop implementation ............... SUCCESS
> > > [1.878s]
> > > > > [INFO] Airavata GFac GRAM implementation ................. SUCCESS
> > > [0.472s]
> > > > > [INFO] Airavata GFac BES implementation .................. SUCCESS
> > > [1.400s]
> > > > > [INFO] Airavata Security Implementation .................. SUCCESS
> > > [0.221s]
> > > > > [INFO] Airavata Credential Store Service ................. SUCCESS
> > > [0.018s]
> > > > > [INFO] airavata-credential-store-webapp .................. SUCCESS
> > > [0.359s]
> > > > > [INFO] Airavata Orchestrator Client SDK .................. SUCCESS
> > > [0.390s]
> > > > > [INFO] Airavata Tools .................................... SUCCESS
> > > [0.020s]
> > > > > [INFO] registry-tool ..................................... SUCCESS
> > > [0.052s]
> > > > > [INFO] Airavata Standalone Server ........................ SUCCESS
> > > [0.493s]
> > > > > [INFO] Airavata Test Suite ............................... SUCCESS
> > > [0.576s]
> > > > > [INFO] distribution ...................................... SUCCESS
> > > [0.044s]
> > > > > [INFO] Airavata server distribution ...................... SUCCESS
> > > [1.686s]
> > > > > [INFO] Airavata Client Distribution Parent ............... SUCCESS
> > > [0.022s]
> > > > > [INFO] Airavata Client Java Distribution ................. SUCCESS
> > > [0.522s]
> > > > > [INFO] Airavata release artifacts ........................ SUCCESS
> > > [0.035s]
> > > > > [INFO] Airavata Integration Tests ........................ SUCCESS
> > > [0.695s]
> > > > > [INFO] Airavata XBaya .................................... SUCCESS
> > > [0.680s]
> > > > > [INFO]
> > > > >
> > >
> ------------------------------------------------------------------------
> > > > > [INFO] BUILD SUCCESS
> > > > > [INFO]
> > > > >
> > >
> ------------------------------------------------------------------------
> > > > > [INFO] Total time: 38.665s
> > > > > [INFO] Finished at: Thu Oct 23 14:20:59 PDT 2014
> > > > > [INFO] Final Memory: 45M/273M
> > > > > [INFO]
> > > > >
> > >
> ------------------------------------------------------------------------
> > > > >
> > > > >
> > > > >
> > > > > On Thu, Oct 23, 2014 at 01:26:57PM -0700, K Yoshimoto wrote:
> > > > > >
> > > > > > Shameera,
> > > > > >
> > > > > >  Thanks for the info.  I did not do the mvn eclipse:eclipse.
> > > > > > I'll update my repo, then do mvn eclipse:eclipse and delete/load
> > > > > > XBaya.  I'll update if it works or if I run into something else.
> > > > > >
> > > > > > Kenneth
> > > > > >
> > > > > > On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka
> wrote:
> > > > > > > Hi Yoshimoto,
> > > > > > >
> > > > > > > I just try to build the latest trunk and i don't see any
> > > compilation
> > > > > error.
> > > > > > > To narrow down the issue, I have few questions for you.
> > > > > > > 1. are you working on latest trunk or previous released
> version?
> > > if it
> > > > > is
> > > > > > > trunk make sure you have latest revision. if it is previous
> > > version,
> > > > > which
> > > > > > > version you are using?
> > > > > > > 2. Could you able to build the source code using "mvn clean
> > > install"
> > > > > > > without any issue?
> > > > > > > 3. Did you run mvn eclispse:eclipse command before you open the
> > > project
> > > > > > > from eclipse?
> > > > > > >
> > > > > > > According to the error stack it seems eclipse project doesn't
> has
> > > all
> > > > > > > required jar in class path."mvn eclipse:eclipse" will solve
> this
> > > issue
> > > > > but
> > > > > > > to effect the changes, delete the airavata eclipse project and
> > > reopen
> > > > > the
> > > > > > > source code as new project, in other ward reload the eclipse
> > > project.
> > > > > Now
> > > > > > > try to run the XBaya class.
> > > > > > >
> > > > > > > I am waiting for you answers to my above questions, please let
> me
> > > know
> > > > > if
> > > > > > > you hit any issue down the path.
> > > > > > >
> > > > > > > Thanks,
> > > > > > > Shameera.
> > > > > > >
> > > > > > > On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <kenneth@sdsc.edu
> >
> > > wrote:
> > > > > > >
> > > > > > > >
> > > > > > > > Hi,
> > > > > > > >
> > > > > > > >  I am trying to start up the XBaya GUI from Eclipse, but get
> > > > > > > > an error about missing type ErrorWindow.  Has anyone seen
> this?
> > > > > > > > Where is ErrorWindow supposed to come from?
> > > > > > > >
> > > > > > > > SLF4J: Class path contains multiple SLF4J bindings.
> > > > > > > > SLF4J: Found binding in
> > > > > > > >
> > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > SLF4J: Found binding in
> > > > > > > >
> > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > SLF4J: Found binding in
> > > > > > > >
> > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > SLF4J: Found binding in
> > > > > > > >
> > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings
> > > for an
> > > > > > > > explanation.
> > > > > > > > SLF4J: Actual binding is of type
> > > [org.slf4j.impl.Log4jLoggerFactory]
> > > > > > > > Exception in thread "main" java.lang.Error: Unresolved
> > > compilation
> > > > > > > > problems:
> > > > > > > >         The method getErrorWindow() from the type XBayaGUI
> > > refers to
> > > > > the
> > > > > > > > missing type ErrorWindow
> > > > > > > >         The method getErrorWindow() from the type XBayaGUI
> > > refers to
> > > > > the
> > > > > > > > missing type ErrorWindow
> > > > > > > >
> > > > > > > >         at
> org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
> > > > > > > >         at
> org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
> > > > > > > >
> > > > > > > > Thanks,
> > > > > > > > Kenneth
> > > > > > > >
> > > > > > > > On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa
> wrote:
> > > > > > > > > Hi Kenneth,
> > > > > > > > >
> > > > > > > > > I have attached a sample guide on how to run a simple
> workflow
> > > with
> > > > > > > > > Airavata in the thread 'Unable to start Airavata after the
> > > source
> > > > > build'
> > > > > > > > .
> > > > > > > > > I think you can refer to that till the Quickstart
> tutorials are
> > > > > > > > officially
> > > > > > > > > online.
> > > > > > > > >
> > > > > > > > > In order to answer you question, the XBaya GUI binary
> > > distribution
> > > > > is not
> > > > > > > > > yet present in the trunk. Therefore at present XBaya GUI
> can't
> > > be
> > > > > started
> > > > > > > > > by extracting XBaya GUI archive. Instead the GUI client is
> > > started
> > > > > by
> > > > > > > > > directly running org.apache.airavata.xbaya.XBaya class
> through
> > > an
> > > > > IDE.
> > > > > > > > >
> > > > > > > > > Hope this helps.
> > > > > > > > >
> > > > > > > > > Thanks!
> > > > > > > > > Ishara
> > > > > > > > >
> > > > > > > > > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <
> kenneth@sdsc.edu
> > > >
> > > > > wrote:
> > > > > > > > >
> > > > > > > > > >
> > > > > > > > > > Thanks, Suresh.  I'll keep an eye on the dev list to see
> when
> > > > > > > > > > things are more up-to-date.  If you notice things are
> ready,
> > > > > > > > > > could you ping me also?
> > > > > > > > > >
> > > > > > > > > > Kenneth
> > > > > > > > > >
> > > > > > > > > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru
> wrote:
> > > > > > > > > > > Hi Kenneth,
> > > > > > > > > > >
> > > > > > > > > > > Sorry the tutorials are out of date and we are trying
> to
> > > fix
> > > > > them
> > > > > > > > with
> > > > > > > > > > the 0.14 release.
> > > > > > > > > > >
> > > > > > > > > > > Shameera is close to bring these tutorials back online,
> > > some
> > > > > > > > discussion
> > > > > > > > > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > > > > > > > > >
> > > > > > > > > > > Suresh
> > > > > > > > > > >
> > > > > > > > > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <
> kenneth@sdsc.edu
> > > >
> > > > > wrote:
> > > > > > > > > > >
> > > > > > > > > > > >
> > > > > > > > > > > > I'm playing with airavata 0.14.  I am going through
> some
> > > of
> > > > > the
> > > > > > > > > > > > quickstart tutorials:
> > > > > > > > > > > >
> > > > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > > > > > > > > >
> > > > > > > > > > > > I'm at the step of firing up xbaya-gui, but I'm not
> > > seeing
> > > > > > > > > > > > an obvious release distribution for it.  Is it
> somewhere
> > > > > > > > > > > > else in the tree?  I was looking in
> release-artifacts,
> > > but
> > > > > > > > > > > > only see:
> > > > > > > > > > > >
> > > > > > > > > > > > release-artifacts$ ls
> > > > > > > > > > > >
> apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > >
> apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > >
> apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > >
> > > > > > > > > > > > Should I look someplace else?  Did I miss a build
> step?
> > > > > > > > > > > >
> > > > > > > > > > > > Kenneth
> > > > > > > > > > > >
> > > > > > > > > >
> > > > > > > > >
> > > > > > > > >
> > > > > > > > >
> > > > > > > > > --
> > > > > > > > > *Best Regards.*
> > > > > > > > >
> > > > > > > > > *Ishara Premadasa,*
> > > > > > > > > http://isharapremadasa.blogspot.com
> > > > > > > >
> > > > > > >
> > > > > > >
> > > > > > >
> > > > > > > --
> > > > > > > Best Regards,
> > > > > > > Shameera Rathnayaka.
> > > > > > >
> > > > > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > > > > Blog : http://shameerarathnayaka.blogspot.com/
> > > > >
> > > >
> > > >
> > > >
> > > > --
> > > > Best Regards,
> > > > Shameera Rathnayaka.
> > > >
> > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > Blog : http://shameerarathnayaka.blogspot.com/
> > >
> >
> >
> >
> > --
> > Best Regards,
> > Shameera Rathnayaka.
> >
> > email: shameera AT apache.org , shameerainfo AT gmail.com
> > Blog : http://shameerarathnayaka.blogspot.com/
>

Re: xbaya-gui distribution?

Posted by K Yoshimoto <ke...@sdsc.edu>.
Looks like my classpath has version 1.7.2, rather than 1.7.6.
I was trying a new git pull, mvn clean install to try to see
where I'm getting the bad path.  My mvn clean install is hanging
trying to run an experiment.  Is the big refactoring making things
unstable right now?

mvn clean install
...
[INFO] Running job in localhost
[INFO] ========================
[INFO] Adding applications...
[INFO] Creating experiment...
[INFO] Experiment Id returned : echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4
[INFO] Experiment launched successfully

[INFO] Monitoring job in localhost
[INFO] ===========================
[INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : CREATED [Wed Oct 29 11:58:31 PDT 2014]
[INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : LAUNCHED [Wed Oct 29 11:58:33 PDT 2014]
[INFO] echoExperiment_ca564d17-8d7f-4d3d-821b-18735ac2ace4 : EXECUTING [Wed Oct 29 11:58:36 PDT 2014]



On Fri, Oct 24, 2014 at 09:46:59PM -0400, Shameera Rathnayaka wrote:
> Hi Kenneth,
> 
> Check that slf4j-api-1.7.6.jar is in your class path? if not add it to the
> class path, normally this should be added to class path when we run "mvn
> clean install"(download the jar) and "mvn eclipse:eclipse" (Added jar to
> the project classpath). not sure why that is not in classpath.
> 
> Yes, that warning can be ignored.
> 
> Thanks,
> Shameera.
> 
> On Fri, Oct 24, 2014 at 7:07 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> 
> >
> > Thanks for the hints, Shameera.
> > I'm not seeing red libraries or other errors in the run configurations
> > or build path.
> >
> > I'm seeing this error now:
> > Exception in thread "main" java.lang.NoClassDefFoundError:
> > org/slf4j/LoggerFactory
> >         at org.apache.airavata.xbaya.XBaya.<clinit>(XBaya.java:35)
> > Caused by: java.lang.ClassNotFoundException: org.slf4j.LoggerFactory
> >         at java.net.URLClassLoader$1.run(URLClassLoader.java:217)
> >         at java.security.AccessController.doPrivileged(Native Method)
> >         at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
> >         at java.lang.ClassLoader.loadClass(ClassLoader.java:323)
> >         at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
> >         at java.lang.ClassLoader.loadClass(ClassLoader.java:268)
> >         ... 1 more
> > Could not find the main class: org.apache.airavata.xbaya.XBaya. Program
> > will exit.
> >
> > From mvn clean install, I do get this warning:
> >
> > Tests run: 1, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.031 sec
> > Running org.apache.airavata.security.userstore.JDBCUserStoreTest
> > SLF4J: Class path contains multiple SLF4J bindings.
> > SLF4J: Found binding in
> > [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-log4j12/1.7.6/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > SLF4J: Found binding in
> > [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-simple/1.7.6/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
> > explanation.
> > SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
> > log4j:WARN No appenders could be found for logger
> > (org.apache.airavata.security.util.PasswordDigester).
> > log4j:WARN Please initialize the log4j system properly.
> > log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for
> > more info.
> > Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 57.169 sec
> > Running org.apache.airavata.security.userstore.SessionDBUserStoreTest
> >
> > Is the warning ignorable, or could this be causing a failure to find main?
> >
> > Kenneth
> >
> > On Thu, Oct 23, 2014 at 08:32:47PM -0400, Shameera Rathnayaka wrote:
> > > Hi Kenneth,
> > >
> > > I am not much familiar with eclipse. But after googling the above issue
> > > found following will help you to resolve classpath issue.
> > >
> > > 1) Run Configurations
> > >
> > >    - Right click on your project
> > >       - then click "Run" -> "Run Configurations..."
> > >       - there check your settings for you project
> > >       - here look into you tab "Classpath" under "User Entries"
> > >
> > > 2) Project classpath
> > >
> > >    - Right click on your project -> "Properties" -> "Java Build Path"
> > >       - now check the "Source" Tab as well as your "Libraries" Tab
> > >       - Problems should be marked red in the "Libraries" tab
> > >
> > > Thanks,
> > > Shameera.
> > >
> > > On Thu, Oct 23, 2014 at 5:45 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > >
> > > >
> > > > I did
> > > > git pull
> > > > mvn clean install
> > > > mvn eclipse:clean
> > > > mvn eclipse:eclipse
> > > >
> > > > I am getting an error when trying to run XBaya from Eclipse:
> > > > "The project: airavata-workflow-model-core which is referenced by the
> > > > classpath, does not exist."
> > > >
> > > > Maybe I have some garbage left over in my config somewhere?  Or is
> > > > airavata-workflow-model-core supposed to be there?
> > > >
> > > > I think mvn eclipse:eclipse worked:
> > > > ...
> > > > [INFO]
> > > > [INFO] <<< maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > > airavata-xbaya-gui <<<
> > > > [INFO]
> > > > [INFO] --- maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > > airavata-xbaya-gui ---
> > > > [INFO] Using Eclipse Workspace: null
> > > > [INFO] Adding default classpath container:
> > > > org.eclipse.jdt.launching.JRE_CONTAINER
> > > > [INFO] Wrote Eclipse project for "airavata-xbaya-gui" to
> > > > /media/scigap/scigap/javaclient/airavata/modules/xbaya-gui.
> > > > [INFO]
> > > > [INFO]
> > > >
> > ------------------------------------------------------------------------
> > > > [INFO] Reactor Summary:
> > > > [INFO]
> > > > [INFO] Airavata .......................................... SUCCESS
> > [1.564s]
> > > > [INFO] Airavata Configuration ............................ SUCCESS
> > [0.042s]
> > > > [INFO] Airavata Server Configuration ..................... SUCCESS
> > [0.065s]
> > > > [INFO] Airavata Client Configuration ..................... SUCCESS
> > [0.060s]
> > > > [INFO] Airavata API ...................................... SUCCESS
> > [0.086s]
> > > > [INFO] Airavata Data Models .............................. SUCCESS
> > [0.488s]
> > > > [INFO] Airavata Generated Stubs Skeltons ................. SUCCESS
> > [0.211s]
> > > > [INFO] Airavata Model Utilities .......................... SUCCESS
> > [0.157s]
> > > > [INFO] Airavata Commons .................................. SUCCESS
> > [0.063s]
> > > > [INFO] Airavata Common Utilities ......................... SUCCESS
> > [2.065s]
> > > > [INFO] Airavata GFac Schema Utilities .................... SUCCESS
> > [1.323s]
> > > > [INFO] Airavata Credential Store ......................... SUCCESS
> > [1.085s]
> > > > [INFO] Airavata Registry ................................. SUCCESS
> > [0.026s]
> > > > [INFO] Airavata Registry CPI ............................. SUCCESS
> > [0.353s]
> > > > [INFO] Airavata JPA Registry ............................. SUCCESS
> > [1.008s]
> > > > [INFO] Airavata Application Catalog ...................... SUCCESS
> > [0.063s]
> > > > [INFO] Airavata Application Catalog CPI .................. SUCCESS
> > [0.532s]
> > > > [INFO] Airavata Application Catalog Data ................. SUCCESS
> > [0.544s]
> > > > [INFO] Airavata Workflow Execution Context ............... SUCCESS
> > [0.598s]
> > > > [INFO] Airavata WS Messenger ............................. SUCCESS
> > [0.054s]
> > > > [INFO] Airavata Messenger Commons ........................ SUCCESS
> > [0.863s]
> > > > [INFO] Airavata Messenger Client ......................... SUCCESS
> > [0.690s]
> > > > [INFO] Airavata Workflow Tracking ........................ SUCCESS
> > [0.817s]
> > > > [INFO] Airavata Messaging Framework ...................... SUCCESS
> > [0.022s]
> > > > [INFO] Airavata Messaging Framework Core ................. SUCCESS
> > [0.365s]
> > > > [INFO] Airavata GFac ..................................... SUCCESS
> > [0.021s]
> > > > [INFO] Airavata GFac Core ................................ SUCCESS
> > [0.542s]
> > > > [INFO] Airavata Gfac Service ............................. SUCCESS
> > [0.705s]
> > > > [INFO] GSISSH Library .................................... SUCCESS
> > [0.282s]
> > > > [INFO] Airavata GFac GSI-SSH implementation .............. SUCCESS
> > [0.575s]
> > > > [INFO] Airavata GFac SSH implementation .................. SUCCESS
> > [0.737s]
> > > > [INFO] Airavata GFac Grid Job Monitor .................... SUCCESS
> > [2.168s]
> > > > [INFO] Airavata GFac Local implementation ................ SUCCESS
> > [1.005s]
> > > > [INFO] Airavata Orchestrator ............................. SUCCESS
> > [0.046s]
> > > > [INFO] Airavata Orchestrator Core ........................ SUCCESS
> > [1.460s]
> > > > [INFO] Airavata Orchestrator Service ..................... SUCCESS
> > [1.036s]
> > > > [INFO] Airavata Workflow Model Parent .................... SUCCESS
> > [0.023s]
> > > > [INFO] Airavata Workflow Model Core ...................... SUCCESS
> > [0.469s]
> > > > [INFO] Airavata Workflow Component ....................... SUCCESS
> > [0.547s]
> > > > [INFO] Airavata WS Monitor ............................... SUCCESS
> > [0.500s]
> > > > [INFO] Airavata GFac EC2 Implementation .................. SUCCESS
> > [0.638s]
> > > > [INFO] Airavata Workflow Engine .......................... SUCCESS
> > [0.770s]
> > > > [INFO] Airavata API Server ............................... SUCCESS
> > [0.762s]
> > > > [INFO] Airavata Client SDKS .............................. SUCCESS
> > [0.019s]
> > > > [INFO] Apache Airavata PHP SDK ........................... SUCCESS
> > [0.023s]
> > > > [INFO] Airavata Client CPP SDK ........................... SUCCESS
> > [0.045s]
> > > > [INFO] Airavata Client Samples ........................... SUCCESS
> > [0.101s]
> > > > [INFO] Airavata Client ................................... SUCCESS
> > [0.545s]
> > > > [INFO] Airavata GFac Hadoop implementation ............... SUCCESS
> > [1.878s]
> > > > [INFO] Airavata GFac GRAM implementation ................. SUCCESS
> > [0.472s]
> > > > [INFO] Airavata GFac BES implementation .................. SUCCESS
> > [1.400s]
> > > > [INFO] Airavata Security Implementation .................. SUCCESS
> > [0.221s]
> > > > [INFO] Airavata Credential Store Service ................. SUCCESS
> > [0.018s]
> > > > [INFO] airavata-credential-store-webapp .................. SUCCESS
> > [0.359s]
> > > > [INFO] Airavata Orchestrator Client SDK .................. SUCCESS
> > [0.390s]
> > > > [INFO] Airavata Tools .................................... SUCCESS
> > [0.020s]
> > > > [INFO] registry-tool ..................................... SUCCESS
> > [0.052s]
> > > > [INFO] Airavata Standalone Server ........................ SUCCESS
> > [0.493s]
> > > > [INFO] Airavata Test Suite ............................... SUCCESS
> > [0.576s]
> > > > [INFO] distribution ...................................... SUCCESS
> > [0.044s]
> > > > [INFO] Airavata server distribution ...................... SUCCESS
> > [1.686s]
> > > > [INFO] Airavata Client Distribution Parent ............... SUCCESS
> > [0.022s]
> > > > [INFO] Airavata Client Java Distribution ................. SUCCESS
> > [0.522s]
> > > > [INFO] Airavata release artifacts ........................ SUCCESS
> > [0.035s]
> > > > [INFO] Airavata Integration Tests ........................ SUCCESS
> > [0.695s]
> > > > [INFO] Airavata XBaya .................................... SUCCESS
> > [0.680s]
> > > > [INFO]
> > > >
> > ------------------------------------------------------------------------
> > > > [INFO] BUILD SUCCESS
> > > > [INFO]
> > > >
> > ------------------------------------------------------------------------
> > > > [INFO] Total time: 38.665s
> > > > [INFO] Finished at: Thu Oct 23 14:20:59 PDT 2014
> > > > [INFO] Final Memory: 45M/273M
> > > > [INFO]
> > > >
> > ------------------------------------------------------------------------
> > > >
> > > >
> > > >
> > > > On Thu, Oct 23, 2014 at 01:26:57PM -0700, K Yoshimoto wrote:
> > > > >
> > > > > Shameera,
> > > > >
> > > > >  Thanks for the info.  I did not do the mvn eclipse:eclipse.
> > > > > I'll update my repo, then do mvn eclipse:eclipse and delete/load
> > > > > XBaya.  I'll update if it works or if I run into something else.
> > > > >
> > > > > Kenneth
> > > > >
> > > > > On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka wrote:
> > > > > > Hi Yoshimoto,
> > > > > >
> > > > > > I just try to build the latest trunk and i don't see any
> > compilation
> > > > error.
> > > > > > To narrow down the issue, I have few questions for you.
> > > > > > 1. are you working on latest trunk or previous released version?
> > if it
> > > > is
> > > > > > trunk make sure you have latest revision. if it is previous
> > version,
> > > > which
> > > > > > version you are using?
> > > > > > 2. Could you able to build the source code using "mvn clean
> > install"
> > > > > > without any issue?
> > > > > > 3. Did you run mvn eclispse:eclipse command before you open the
> > project
> > > > > > from eclipse?
> > > > > >
> > > > > > According to the error stack it seems eclipse project doesn't has
> > all
> > > > > > required jar in class path."mvn eclipse:eclipse" will solve this
> > issue
> > > > but
> > > > > > to effect the changes, delete the airavata eclipse project and
> > reopen
> > > > the
> > > > > > source code as new project, in other ward reload the eclipse
> > project.
> > > > Now
> > > > > > try to run the XBaya class.
> > > > > >
> > > > > > I am waiting for you answers to my above questions, please let me
> > know
> > > > if
> > > > > > you hit any issue down the path.
> > > > > >
> > > > > > Thanks,
> > > > > > Shameera.
> > > > > >
> > > > > > On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <ke...@sdsc.edu>
> > wrote:
> > > > > >
> > > > > > >
> > > > > > > Hi,
> > > > > > >
> > > > > > >  I am trying to start up the XBaya GUI from Eclipse, but get
> > > > > > > an error about missing type ErrorWindow.  Has anyone seen this?
> > > > > > > Where is ErrorWindow supposed to come from?
> > > > > > >
> > > > > > > SLF4J: Class path contains multiple SLF4J bindings.
> > > > > > > SLF4J: Found binding in
> > > > > > >
> > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > SLF4J: Found binding in
> > > > > > >
> > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > SLF4J: Found binding in
> > > > > > >
> > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > SLF4J: Found binding in
> > > > > > >
> > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings
> > for an
> > > > > > > explanation.
> > > > > > > SLF4J: Actual binding is of type
> > [org.slf4j.impl.Log4jLoggerFactory]
> > > > > > > Exception in thread "main" java.lang.Error: Unresolved
> > compilation
> > > > > > > problems:
> > > > > > >         The method getErrorWindow() from the type XBayaGUI
> > refers to
> > > > the
> > > > > > > missing type ErrorWindow
> > > > > > >         The method getErrorWindow() from the type XBayaGUI
> > refers to
> > > > the
> > > > > > > missing type ErrorWindow
> > > > > > >
> > > > > > >         at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
> > > > > > >         at org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
> > > > > > >
> > > > > > > Thanks,
> > > > > > > Kenneth
> > > > > > >
> > > > > > > On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> > > > > > > > Hi Kenneth,
> > > > > > > >
> > > > > > > > I have attached a sample guide on how to run a simple workflow
> > with
> > > > > > > > Airavata in the thread 'Unable to start Airavata after the
> > source
> > > > build'
> > > > > > > .
> > > > > > > > I think you can refer to that till the Quickstart tutorials are
> > > > > > > officially
> > > > > > > > online.
> > > > > > > >
> > > > > > > > In order to answer you question, the XBaya GUI binary
> > distribution
> > > > is not
> > > > > > > > yet present in the trunk. Therefore at present XBaya GUI can't
> > be
> > > > started
> > > > > > > > by extracting XBaya GUI archive. Instead the GUI client is
> > started
> > > > by
> > > > > > > > directly running org.apache.airavata.xbaya.XBaya class through
> > an
> > > > IDE.
> > > > > > > >
> > > > > > > > Hope this helps.
> > > > > > > >
> > > > > > > > Thanks!
> > > > > > > > Ishara
> > > > > > > >
> > > > > > > > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <kenneth@sdsc.edu
> > >
> > > > wrote:
> > > > > > > >
> > > > > > > > >
> > > > > > > > > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > > > > > > > > things are more up-to-date.  If you notice things are ready,
> > > > > > > > > could you ping me also?
> > > > > > > > >
> > > > > > > > > Kenneth
> > > > > > > > >
> > > > > > > > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > > > > > > > > Hi Kenneth,
> > > > > > > > > >
> > > > > > > > > > Sorry the tutorials are out of date and we are trying to
> > fix
> > > > them
> > > > > > > with
> > > > > > > > > the 0.14 release.
> > > > > > > > > >
> > > > > > > > > > Shameera is close to bring these tutorials back online,
> > some
> > > > > > > discussion
> > > > > > > > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > > > > > > > >
> > > > > > > > > > Suresh
> > > > > > > > > >
> > > > > > > > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <kenneth@sdsc.edu
> > >
> > > > wrote:
> > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > > > I'm playing with airavata 0.14.  I am going through some
> > of
> > > > the
> > > > > > > > > > > quickstart tutorials:
> > > > > > > > > > >
> > > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > > > > > > > >
> > > > > > > > > > > I'm at the step of firing up xbaya-gui, but I'm not
> > seeing
> > > > > > > > > > > an obvious release distribution for it.  Is it somewhere
> > > > > > > > > > > else in the tree?  I was looking in release-artifacts,
> > but
> > > > > > > > > > > only see:
> > > > > > > > > > >
> > > > > > > > > > > release-artifacts$ ls
> > > > > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > >
> > > > > > > > > > > Should I look someplace else?  Did I miss a build step?
> > > > > > > > > > >
> > > > > > > > > > > Kenneth
> > > > > > > > > > >
> > > > > > > > >
> > > > > > > >
> > > > > > > >
> > > > > > > >
> > > > > > > > --
> > > > > > > > *Best Regards.*
> > > > > > > >
> > > > > > > > *Ishara Premadasa,*
> > > > > > > > http://isharapremadasa.blogspot.com
> > > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > > --
> > > > > > Best Regards,
> > > > > > Shameera Rathnayaka.
> > > > > >
> > > > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > > > Blog : http://shameerarathnayaka.blogspot.com/
> > > >
> > >
> > >
> > >
> > > --
> > > Best Regards,
> > > Shameera Rathnayaka.
> > >
> > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > Blog : http://shameerarathnayaka.blogspot.com/
> >
> 
> 
> 
> -- 
> Best Regards,
> Shameera Rathnayaka.
> 
> email: shameera AT apache.org , shameerainfo AT gmail.com
> Blog : http://shameerarathnayaka.blogspot.com/

Re: xbaya-gui distribution?

Posted by Shameera Rathnayaka <sh...@gmail.com>.
Hi Kenneth,

Check that slf4j-api-1.7.6.jar is in your class path? if not add it to the
class path, normally this should be added to class path when we run "mvn
clean install"(download the jar) and "mvn eclipse:eclipse" (Added jar to
the project classpath). not sure why that is not in classpath.

Yes, that warning can be ignored.

Thanks,
Shameera.

On Fri, Oct 24, 2014 at 7:07 PM, K Yoshimoto <ke...@sdsc.edu> wrote:

>
> Thanks for the hints, Shameera.
> I'm not seeing red libraries or other errors in the run configurations
> or build path.
>
> I'm seeing this error now:
> Exception in thread "main" java.lang.NoClassDefFoundError:
> org/slf4j/LoggerFactory
>         at org.apache.airavata.xbaya.XBaya.<clinit>(XBaya.java:35)
> Caused by: java.lang.ClassNotFoundException: org.slf4j.LoggerFactory
>         at java.net.URLClassLoader$1.run(URLClassLoader.java:217)
>         at java.security.AccessController.doPrivileged(Native Method)
>         at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
>         at java.lang.ClassLoader.loadClass(ClassLoader.java:323)
>         at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
>         at java.lang.ClassLoader.loadClass(ClassLoader.java:268)
>         ... 1 more
> Could not find the main class: org.apache.airavata.xbaya.XBaya. Program
> will exit.
>
> From mvn clean install, I do get this warning:
>
> Tests run: 1, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.031 sec
> Running org.apache.airavata.security.userstore.JDBCUserStoreTest
> SLF4J: Class path contains multiple SLF4J bindings.
> SLF4J: Found binding in
> [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-log4j12/1.7.6/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> SLF4J: Found binding in
> [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-simple/1.7.6/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
> explanation.
> SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
> log4j:WARN No appenders could be found for logger
> (org.apache.airavata.security.util.PasswordDigester).
> log4j:WARN Please initialize the log4j system properly.
> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for
> more info.
> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 57.169 sec
> Running org.apache.airavata.security.userstore.SessionDBUserStoreTest
>
> Is the warning ignorable, or could this be causing a failure to find main?
>
> Kenneth
>
> On Thu, Oct 23, 2014 at 08:32:47PM -0400, Shameera Rathnayaka wrote:
> > Hi Kenneth,
> >
> > I am not much familiar with eclipse. But after googling the above issue
> > found following will help you to resolve classpath issue.
> >
> > 1) Run Configurations
> >
> >    - Right click on your project
> >       - then click "Run" -> "Run Configurations..."
> >       - there check your settings for you project
> >       - here look into you tab "Classpath" under "User Entries"
> >
> > 2) Project classpath
> >
> >    - Right click on your project -> "Properties" -> "Java Build Path"
> >       - now check the "Source" Tab as well as your "Libraries" Tab
> >       - Problems should be marked red in the "Libraries" tab
> >
> > Thanks,
> > Shameera.
> >
> > On Thu, Oct 23, 2014 at 5:45 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> >
> > >
> > > I did
> > > git pull
> > > mvn clean install
> > > mvn eclipse:clean
> > > mvn eclipse:eclipse
> > >
> > > I am getting an error when trying to run XBaya from Eclipse:
> > > "The project: airavata-workflow-model-core which is referenced by the
> > > classpath, does not exist."
> > >
> > > Maybe I have some garbage left over in my config somewhere?  Or is
> > > airavata-workflow-model-core supposed to be there?
> > >
> > > I think mvn eclipse:eclipse worked:
> > > ...
> > > [INFO]
> > > [INFO] <<< maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > airavata-xbaya-gui <<<
> > > [INFO]
> > > [INFO] --- maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > > airavata-xbaya-gui ---
> > > [INFO] Using Eclipse Workspace: null
> > > [INFO] Adding default classpath container:
> > > org.eclipse.jdt.launching.JRE_CONTAINER
> > > [INFO] Wrote Eclipse project for "airavata-xbaya-gui" to
> > > /media/scigap/scigap/javaclient/airavata/modules/xbaya-gui.
> > > [INFO]
> > > [INFO]
> > >
> ------------------------------------------------------------------------
> > > [INFO] Reactor Summary:
> > > [INFO]
> > > [INFO] Airavata .......................................... SUCCESS
> [1.564s]
> > > [INFO] Airavata Configuration ............................ SUCCESS
> [0.042s]
> > > [INFO] Airavata Server Configuration ..................... SUCCESS
> [0.065s]
> > > [INFO] Airavata Client Configuration ..................... SUCCESS
> [0.060s]
> > > [INFO] Airavata API ...................................... SUCCESS
> [0.086s]
> > > [INFO] Airavata Data Models .............................. SUCCESS
> [0.488s]
> > > [INFO] Airavata Generated Stubs Skeltons ................. SUCCESS
> [0.211s]
> > > [INFO] Airavata Model Utilities .......................... SUCCESS
> [0.157s]
> > > [INFO] Airavata Commons .................................. SUCCESS
> [0.063s]
> > > [INFO] Airavata Common Utilities ......................... SUCCESS
> [2.065s]
> > > [INFO] Airavata GFac Schema Utilities .................... SUCCESS
> [1.323s]
> > > [INFO] Airavata Credential Store ......................... SUCCESS
> [1.085s]
> > > [INFO] Airavata Registry ................................. SUCCESS
> [0.026s]
> > > [INFO] Airavata Registry CPI ............................. SUCCESS
> [0.353s]
> > > [INFO] Airavata JPA Registry ............................. SUCCESS
> [1.008s]
> > > [INFO] Airavata Application Catalog ...................... SUCCESS
> [0.063s]
> > > [INFO] Airavata Application Catalog CPI .................. SUCCESS
> [0.532s]
> > > [INFO] Airavata Application Catalog Data ................. SUCCESS
> [0.544s]
> > > [INFO] Airavata Workflow Execution Context ............... SUCCESS
> [0.598s]
> > > [INFO] Airavata WS Messenger ............................. SUCCESS
> [0.054s]
> > > [INFO] Airavata Messenger Commons ........................ SUCCESS
> [0.863s]
> > > [INFO] Airavata Messenger Client ......................... SUCCESS
> [0.690s]
> > > [INFO] Airavata Workflow Tracking ........................ SUCCESS
> [0.817s]
> > > [INFO] Airavata Messaging Framework ...................... SUCCESS
> [0.022s]
> > > [INFO] Airavata Messaging Framework Core ................. SUCCESS
> [0.365s]
> > > [INFO] Airavata GFac ..................................... SUCCESS
> [0.021s]
> > > [INFO] Airavata GFac Core ................................ SUCCESS
> [0.542s]
> > > [INFO] Airavata Gfac Service ............................. SUCCESS
> [0.705s]
> > > [INFO] GSISSH Library .................................... SUCCESS
> [0.282s]
> > > [INFO] Airavata GFac GSI-SSH implementation .............. SUCCESS
> [0.575s]
> > > [INFO] Airavata GFac SSH implementation .................. SUCCESS
> [0.737s]
> > > [INFO] Airavata GFac Grid Job Monitor .................... SUCCESS
> [2.168s]
> > > [INFO] Airavata GFac Local implementation ................ SUCCESS
> [1.005s]
> > > [INFO] Airavata Orchestrator ............................. SUCCESS
> [0.046s]
> > > [INFO] Airavata Orchestrator Core ........................ SUCCESS
> [1.460s]
> > > [INFO] Airavata Orchestrator Service ..................... SUCCESS
> [1.036s]
> > > [INFO] Airavata Workflow Model Parent .................... SUCCESS
> [0.023s]
> > > [INFO] Airavata Workflow Model Core ...................... SUCCESS
> [0.469s]
> > > [INFO] Airavata Workflow Component ....................... SUCCESS
> [0.547s]
> > > [INFO] Airavata WS Monitor ............................... SUCCESS
> [0.500s]
> > > [INFO] Airavata GFac EC2 Implementation .................. SUCCESS
> [0.638s]
> > > [INFO] Airavata Workflow Engine .......................... SUCCESS
> [0.770s]
> > > [INFO] Airavata API Server ............................... SUCCESS
> [0.762s]
> > > [INFO] Airavata Client SDKS .............................. SUCCESS
> [0.019s]
> > > [INFO] Apache Airavata PHP SDK ........................... SUCCESS
> [0.023s]
> > > [INFO] Airavata Client CPP SDK ........................... SUCCESS
> [0.045s]
> > > [INFO] Airavata Client Samples ........................... SUCCESS
> [0.101s]
> > > [INFO] Airavata Client ................................... SUCCESS
> [0.545s]
> > > [INFO] Airavata GFac Hadoop implementation ............... SUCCESS
> [1.878s]
> > > [INFO] Airavata GFac GRAM implementation ................. SUCCESS
> [0.472s]
> > > [INFO] Airavata GFac BES implementation .................. SUCCESS
> [1.400s]
> > > [INFO] Airavata Security Implementation .................. SUCCESS
> [0.221s]
> > > [INFO] Airavata Credential Store Service ................. SUCCESS
> [0.018s]
> > > [INFO] airavata-credential-store-webapp .................. SUCCESS
> [0.359s]
> > > [INFO] Airavata Orchestrator Client SDK .................. SUCCESS
> [0.390s]
> > > [INFO] Airavata Tools .................................... SUCCESS
> [0.020s]
> > > [INFO] registry-tool ..................................... SUCCESS
> [0.052s]
> > > [INFO] Airavata Standalone Server ........................ SUCCESS
> [0.493s]
> > > [INFO] Airavata Test Suite ............................... SUCCESS
> [0.576s]
> > > [INFO] distribution ...................................... SUCCESS
> [0.044s]
> > > [INFO] Airavata server distribution ...................... SUCCESS
> [1.686s]
> > > [INFO] Airavata Client Distribution Parent ............... SUCCESS
> [0.022s]
> > > [INFO] Airavata Client Java Distribution ................. SUCCESS
> [0.522s]
> > > [INFO] Airavata release artifacts ........................ SUCCESS
> [0.035s]
> > > [INFO] Airavata Integration Tests ........................ SUCCESS
> [0.695s]
> > > [INFO] Airavata XBaya .................................... SUCCESS
> [0.680s]
> > > [INFO]
> > >
> ------------------------------------------------------------------------
> > > [INFO] BUILD SUCCESS
> > > [INFO]
> > >
> ------------------------------------------------------------------------
> > > [INFO] Total time: 38.665s
> > > [INFO] Finished at: Thu Oct 23 14:20:59 PDT 2014
> > > [INFO] Final Memory: 45M/273M
> > > [INFO]
> > >
> ------------------------------------------------------------------------
> > >
> > >
> > >
> > > On Thu, Oct 23, 2014 at 01:26:57PM -0700, K Yoshimoto wrote:
> > > >
> > > > Shameera,
> > > >
> > > >  Thanks for the info.  I did not do the mvn eclipse:eclipse.
> > > > I'll update my repo, then do mvn eclipse:eclipse and delete/load
> > > > XBaya.  I'll update if it works or if I run into something else.
> > > >
> > > > Kenneth
> > > >
> > > > On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka wrote:
> > > > > Hi Yoshimoto,
> > > > >
> > > > > I just try to build the latest trunk and i don't see any
> compilation
> > > error.
> > > > > To narrow down the issue, I have few questions for you.
> > > > > 1. are you working on latest trunk or previous released version?
> if it
> > > is
> > > > > trunk make sure you have latest revision. if it is previous
> version,
> > > which
> > > > > version you are using?
> > > > > 2. Could you able to build the source code using "mvn clean
> install"
> > > > > without any issue?
> > > > > 3. Did you run mvn eclispse:eclipse command before you open the
> project
> > > > > from eclipse?
> > > > >
> > > > > According to the error stack it seems eclipse project doesn't has
> all
> > > > > required jar in class path."mvn eclipse:eclipse" will solve this
> issue
> > > but
> > > > > to effect the changes, delete the airavata eclipse project and
> reopen
> > > the
> > > > > source code as new project, in other ward reload the eclipse
> project.
> > > Now
> > > > > try to run the XBaya class.
> > > > >
> > > > > I am waiting for you answers to my above questions, please let me
> know
> > > if
> > > > > you hit any issue down the path.
> > > > >
> > > > > Thanks,
> > > > > Shameera.
> > > > >
> > > > > On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <ke...@sdsc.edu>
> wrote:
> > > > >
> > > > > >
> > > > > > Hi,
> > > > > >
> > > > > >  I am trying to start up the XBaya GUI from Eclipse, but get
> > > > > > an error about missing type ErrorWindow.  Has anyone seen this?
> > > > > > Where is ErrorWindow supposed to come from?
> > > > > >
> > > > > > SLF4J: Class path contains multiple SLF4J bindings.
> > > > > > SLF4J: Found binding in
> > > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > SLF4J: Found binding in
> > > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > SLF4J: Found binding in
> > > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > SLF4J: Found binding in
> > > > > >
> > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings
> for an
> > > > > > explanation.
> > > > > > SLF4J: Actual binding is of type
> [org.slf4j.impl.Log4jLoggerFactory]
> > > > > > Exception in thread "main" java.lang.Error: Unresolved
> compilation
> > > > > > problems:
> > > > > >         The method getErrorWindow() from the type XBayaGUI
> refers to
> > > the
> > > > > > missing type ErrorWindow
> > > > > >         The method getErrorWindow() from the type XBayaGUI
> refers to
> > > the
> > > > > > missing type ErrorWindow
> > > > > >
> > > > > >         at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
> > > > > >         at org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
> > > > > >
> > > > > > Thanks,
> > > > > > Kenneth
> > > > > >
> > > > > > On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> > > > > > > Hi Kenneth,
> > > > > > >
> > > > > > > I have attached a sample guide on how to run a simple workflow
> with
> > > > > > > Airavata in the thread 'Unable to start Airavata after the
> source
> > > build'
> > > > > > .
> > > > > > > I think you can refer to that till the Quickstart tutorials are
> > > > > > officially
> > > > > > > online.
> > > > > > >
> > > > > > > In order to answer you question, the XBaya GUI binary
> distribution
> > > is not
> > > > > > > yet present in the trunk. Therefore at present XBaya GUI can't
> be
> > > started
> > > > > > > by extracting XBaya GUI archive. Instead the GUI client is
> started
> > > by
> > > > > > > directly running org.apache.airavata.xbaya.XBaya class through
> an
> > > IDE.
> > > > > > >
> > > > > > > Hope this helps.
> > > > > > >
> > > > > > > Thanks!
> > > > > > > Ishara
> > > > > > >
> > > > > > > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <kenneth@sdsc.edu
> >
> > > wrote:
> > > > > > >
> > > > > > > >
> > > > > > > > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > > > > > > > things are more up-to-date.  If you notice things are ready,
> > > > > > > > could you ping me also?
> > > > > > > >
> > > > > > > > Kenneth
> > > > > > > >
> > > > > > > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > > > > > > > Hi Kenneth,
> > > > > > > > >
> > > > > > > > > Sorry the tutorials are out of date and we are trying to
> fix
> > > them
> > > > > > with
> > > > > > > > the 0.14 release.
> > > > > > > > >
> > > > > > > > > Shameera is close to bring these tutorials back online,
> some
> > > > > > discussion
> > > > > > > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > > > > > > >
> > > > > > > > > Suresh
> > > > > > > > >
> > > > > > > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <kenneth@sdsc.edu
> >
> > > wrote:
> > > > > > > > >
> > > > > > > > > >
> > > > > > > > > > I'm playing with airavata 0.14.  I am going through some
> of
> > > the
> > > > > > > > > > quickstart tutorials:
> > > > > > > > > >
> > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > > > > > > >
> > > > > > > > > > I'm at the step of firing up xbaya-gui, but I'm not
> seeing
> > > > > > > > > > an obvious release distribution for it.  Is it somewhere
> > > > > > > > > > else in the tree?  I was looking in release-artifacts,
> but
> > > > > > > > > > only see:
> > > > > > > > > >
> > > > > > > > > > release-artifacts$ ls
> > > > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > > > > > > >
> > > > > > > > > > Should I look someplace else?  Did I miss a build step?
> > > > > > > > > >
> > > > > > > > > > Kenneth
> > > > > > > > > >
> > > > > > > >
> > > > > > >
> > > > > > >
> > > > > > >
> > > > > > > --
> > > > > > > *Best Regards.*
> > > > > > >
> > > > > > > *Ishara Premadasa,*
> > > > > > > http://isharapremadasa.blogspot.com
> > > > > >
> > > > >
> > > > >
> > > > >
> > > > > --
> > > > > Best Regards,
> > > > > Shameera Rathnayaka.
> > > > >
> > > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > > Blog : http://shameerarathnayaka.blogspot.com/
> > >
> >
> >
> >
> > --
> > Best Regards,
> > Shameera Rathnayaka.
> >
> > email: shameera AT apache.org , shameerainfo AT gmail.com
> > Blog : http://shameerarathnayaka.blogspot.com/
>



-- 
Best Regards,
Shameera Rathnayaka.

email: shameera AT apache.org , shameerainfo AT gmail.com
Blog : http://shameerarathnayaka.blogspot.com/

Re: xbaya-gui distribution?

Posted by K Yoshimoto <ke...@sdsc.edu>.
Thanks for the hints, Shameera.
I'm not seeing red libraries or other errors in the run configurations
or build path.

I'm seeing this error now:
Exception in thread "main" java.lang.NoClassDefFoundError: org/slf4j/LoggerFactory
	at org.apache.airavata.xbaya.XBaya.<clinit>(XBaya.java:35)
Caused by: java.lang.ClassNotFoundException: org.slf4j.LoggerFactory
	at java.net.URLClassLoader$1.run(URLClassLoader.java:217)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:323)
	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:268)
	... 1 more
Could not find the main class: org.apache.airavata.xbaya.XBaya. Program will exit.

>From mvn clean install, I do get this warning:

Tests run: 1, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.031 sec
Running org.apache.airavata.security.userstore.JDBCUserStoreTest
SLF4J: Class path contains multiple SLF4J bindings.
SLF4J: Found binding in [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-log4j12/1.7.6/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/home/john/.m2/repository/org/slf4j/slf4j-simple/1.7.6/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation.
SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
log4j:WARN No appenders could be found for logger (org.apache.airavata.security.util.PasswordDigester).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 57.169 sec
Running org.apache.airavata.security.userstore.SessionDBUserStoreTest

Is the warning ignorable, or could this be causing a failure to find main?

Kenneth

On Thu, Oct 23, 2014 at 08:32:47PM -0400, Shameera Rathnayaka wrote:
> Hi Kenneth,
> 
> I am not much familiar with eclipse. But after googling the above issue
> found following will help you to resolve classpath issue.
> 
> 1) Run Configurations
> 
>    - Right click on your project
>       - then click "Run" -> "Run Configurations..."
>       - there check your settings for you project
>       - here look into you tab "Classpath" under "User Entries"
> 
> 2) Project classpath
> 
>    - Right click on your project -> "Properties" -> "Java Build Path"
>       - now check the "Source" Tab as well as your "Libraries" Tab
>       - Problems should be marked red in the "Libraries" tab
> 
> Thanks,
> Shameera.
> 
> On Thu, Oct 23, 2014 at 5:45 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> 
> >
> > I did
> > git pull
> > mvn clean install
> > mvn eclipse:clean
> > mvn eclipse:eclipse
> >
> > I am getting an error when trying to run XBaya from Eclipse:
> > "The project: airavata-workflow-model-core which is referenced by the
> > classpath, does not exist."
> >
> > Maybe I have some garbage left over in my config somewhere?  Or is
> > airavata-workflow-model-core supposed to be there?
> >
> > I think mvn eclipse:eclipse worked:
> > ...
> > [INFO]
> > [INFO] <<< maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > airavata-xbaya-gui <<<
> > [INFO]
> > [INFO] --- maven-eclipse-plugin:2.9:eclipse (default-cli) @
> > airavata-xbaya-gui ---
> > [INFO] Using Eclipse Workspace: null
> > [INFO] Adding default classpath container:
> > org.eclipse.jdt.launching.JRE_CONTAINER
> > [INFO] Wrote Eclipse project for "airavata-xbaya-gui" to
> > /media/scigap/scigap/javaclient/airavata/modules/xbaya-gui.
> > [INFO]
> > [INFO]
> > ------------------------------------------------------------------------
> > [INFO] Reactor Summary:
> > [INFO]
> > [INFO] Airavata .......................................... SUCCESS [1.564s]
> > [INFO] Airavata Configuration ............................ SUCCESS [0.042s]
> > [INFO] Airavata Server Configuration ..................... SUCCESS [0.065s]
> > [INFO] Airavata Client Configuration ..................... SUCCESS [0.060s]
> > [INFO] Airavata API ...................................... SUCCESS [0.086s]
> > [INFO] Airavata Data Models .............................. SUCCESS [0.488s]
> > [INFO] Airavata Generated Stubs Skeltons ................. SUCCESS [0.211s]
> > [INFO] Airavata Model Utilities .......................... SUCCESS [0.157s]
> > [INFO] Airavata Commons .................................. SUCCESS [0.063s]
> > [INFO] Airavata Common Utilities ......................... SUCCESS [2.065s]
> > [INFO] Airavata GFac Schema Utilities .................... SUCCESS [1.323s]
> > [INFO] Airavata Credential Store ......................... SUCCESS [1.085s]
> > [INFO] Airavata Registry ................................. SUCCESS [0.026s]
> > [INFO] Airavata Registry CPI ............................. SUCCESS [0.353s]
> > [INFO] Airavata JPA Registry ............................. SUCCESS [1.008s]
> > [INFO] Airavata Application Catalog ...................... SUCCESS [0.063s]
> > [INFO] Airavata Application Catalog CPI .................. SUCCESS [0.532s]
> > [INFO] Airavata Application Catalog Data ................. SUCCESS [0.544s]
> > [INFO] Airavata Workflow Execution Context ............... SUCCESS [0.598s]
> > [INFO] Airavata WS Messenger ............................. SUCCESS [0.054s]
> > [INFO] Airavata Messenger Commons ........................ SUCCESS [0.863s]
> > [INFO] Airavata Messenger Client ......................... SUCCESS [0.690s]
> > [INFO] Airavata Workflow Tracking ........................ SUCCESS [0.817s]
> > [INFO] Airavata Messaging Framework ...................... SUCCESS [0.022s]
> > [INFO] Airavata Messaging Framework Core ................. SUCCESS [0.365s]
> > [INFO] Airavata GFac ..................................... SUCCESS [0.021s]
> > [INFO] Airavata GFac Core ................................ SUCCESS [0.542s]
> > [INFO] Airavata Gfac Service ............................. SUCCESS [0.705s]
> > [INFO] GSISSH Library .................................... SUCCESS [0.282s]
> > [INFO] Airavata GFac GSI-SSH implementation .............. SUCCESS [0.575s]
> > [INFO] Airavata GFac SSH implementation .................. SUCCESS [0.737s]
> > [INFO] Airavata GFac Grid Job Monitor .................... SUCCESS [2.168s]
> > [INFO] Airavata GFac Local implementation ................ SUCCESS [1.005s]
> > [INFO] Airavata Orchestrator ............................. SUCCESS [0.046s]
> > [INFO] Airavata Orchestrator Core ........................ SUCCESS [1.460s]
> > [INFO] Airavata Orchestrator Service ..................... SUCCESS [1.036s]
> > [INFO] Airavata Workflow Model Parent .................... SUCCESS [0.023s]
> > [INFO] Airavata Workflow Model Core ...................... SUCCESS [0.469s]
> > [INFO] Airavata Workflow Component ....................... SUCCESS [0.547s]
> > [INFO] Airavata WS Monitor ............................... SUCCESS [0.500s]
> > [INFO] Airavata GFac EC2 Implementation .................. SUCCESS [0.638s]
> > [INFO] Airavata Workflow Engine .......................... SUCCESS [0.770s]
> > [INFO] Airavata API Server ............................... SUCCESS [0.762s]
> > [INFO] Airavata Client SDKS .............................. SUCCESS [0.019s]
> > [INFO] Apache Airavata PHP SDK ........................... SUCCESS [0.023s]
> > [INFO] Airavata Client CPP SDK ........................... SUCCESS [0.045s]
> > [INFO] Airavata Client Samples ........................... SUCCESS [0.101s]
> > [INFO] Airavata Client ................................... SUCCESS [0.545s]
> > [INFO] Airavata GFac Hadoop implementation ............... SUCCESS [1.878s]
> > [INFO] Airavata GFac GRAM implementation ................. SUCCESS [0.472s]
> > [INFO] Airavata GFac BES implementation .................. SUCCESS [1.400s]
> > [INFO] Airavata Security Implementation .................. SUCCESS [0.221s]
> > [INFO] Airavata Credential Store Service ................. SUCCESS [0.018s]
> > [INFO] airavata-credential-store-webapp .................. SUCCESS [0.359s]
> > [INFO] Airavata Orchestrator Client SDK .................. SUCCESS [0.390s]
> > [INFO] Airavata Tools .................................... SUCCESS [0.020s]
> > [INFO] registry-tool ..................................... SUCCESS [0.052s]
> > [INFO] Airavata Standalone Server ........................ SUCCESS [0.493s]
> > [INFO] Airavata Test Suite ............................... SUCCESS [0.576s]
> > [INFO] distribution ...................................... SUCCESS [0.044s]
> > [INFO] Airavata server distribution ...................... SUCCESS [1.686s]
> > [INFO] Airavata Client Distribution Parent ............... SUCCESS [0.022s]
> > [INFO] Airavata Client Java Distribution ................. SUCCESS [0.522s]
> > [INFO] Airavata release artifacts ........................ SUCCESS [0.035s]
> > [INFO] Airavata Integration Tests ........................ SUCCESS [0.695s]
> > [INFO] Airavata XBaya .................................... SUCCESS [0.680s]
> > [INFO]
> > ------------------------------------------------------------------------
> > [INFO] BUILD SUCCESS
> > [INFO]
> > ------------------------------------------------------------------------
> > [INFO] Total time: 38.665s
> > [INFO] Finished at: Thu Oct 23 14:20:59 PDT 2014
> > [INFO] Final Memory: 45M/273M
> > [INFO]
> > ------------------------------------------------------------------------
> >
> >
> >
> > On Thu, Oct 23, 2014 at 01:26:57PM -0700, K Yoshimoto wrote:
> > >
> > > Shameera,
> > >
> > >  Thanks for the info.  I did not do the mvn eclipse:eclipse.
> > > I'll update my repo, then do mvn eclipse:eclipse and delete/load
> > > XBaya.  I'll update if it works or if I run into something else.
> > >
> > > Kenneth
> > >
> > > On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka wrote:
> > > > Hi Yoshimoto,
> > > >
> > > > I just try to build the latest trunk and i don't see any compilation
> > error.
> > > > To narrow down the issue, I have few questions for you.
> > > > 1. are you working on latest trunk or previous released version? if it
> > is
> > > > trunk make sure you have latest revision. if it is previous version,
> > which
> > > > version you are using?
> > > > 2. Could you able to build the source code using "mvn clean install"
> > > > without any issue?
> > > > 3. Did you run mvn eclispse:eclipse command before you open the project
> > > > from eclipse?
> > > >
> > > > According to the error stack it seems eclipse project doesn't has all
> > > > required jar in class path."mvn eclipse:eclipse" will solve this issue
> > but
> > > > to effect the changes, delete the airavata eclipse project and reopen
> > the
> > > > source code as new project, in other ward reload the eclipse project.
> > Now
> > > > try to run the XBaya class.
> > > >
> > > > I am waiting for you answers to my above questions, please let me know
> > if
> > > > you hit any issue down the path.
> > > >
> > > > Thanks,
> > > > Shameera.
> > > >
> > > > On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > > >
> > > > >
> > > > > Hi,
> > > > >
> > > > >  I am trying to start up the XBaya GUI from Eclipse, but get
> > > > > an error about missing type ErrorWindow.  Has anyone seen this?
> > > > > Where is ErrorWindow supposed to come from?
> > > > >
> > > > > SLF4J: Class path contains multiple SLF4J bindings.
> > > > > SLF4J: Found binding in
> > > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > SLF4J: Found binding in
> > > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > SLF4J: Found binding in
> > > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > SLF4J: Found binding in
> > > > >
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
> > > > > explanation.
> > > > > SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
> > > > > Exception in thread "main" java.lang.Error: Unresolved compilation
> > > > > problems:
> > > > >         The method getErrorWindow() from the type XBayaGUI refers to
> > the
> > > > > missing type ErrorWindow
> > > > >         The method getErrorWindow() from the type XBayaGUI refers to
> > the
> > > > > missing type ErrorWindow
> > > > >
> > > > >         at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
> > > > >         at org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
> > > > >
> > > > > Thanks,
> > > > > Kenneth
> > > > >
> > > > > On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> > > > > > Hi Kenneth,
> > > > > >
> > > > > > I have attached a sample guide on how to run a simple workflow with
> > > > > > Airavata in the thread 'Unable to start Airavata after the source
> > build'
> > > > > .
> > > > > > I think you can refer to that till the Quickstart tutorials are
> > > > > officially
> > > > > > online.
> > > > > >
> > > > > > In order to answer you question, the XBaya GUI binary distribution
> > is not
> > > > > > yet present in the trunk. Therefore at present XBaya GUI can't be
> > started
> > > > > > by extracting XBaya GUI archive. Instead the GUI client is started
> > by
> > > > > > directly running org.apache.airavata.xbaya.XBaya class through an
> > IDE.
> > > > > >
> > > > > > Hope this helps.
> > > > > >
> > > > > > Thanks!
> > > > > > Ishara
> > > > > >
> > > > > > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <ke...@sdsc.edu>
> > wrote:
> > > > > >
> > > > > > >
> > > > > > > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > > > > > > things are more up-to-date.  If you notice things are ready,
> > > > > > > could you ping me also?
> > > > > > >
> > > > > > > Kenneth
> > > > > > >
> > > > > > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > > > > > > Hi Kenneth,
> > > > > > > >
> > > > > > > > Sorry the tutorials are out of date and we are trying to fix
> > them
> > > > > with
> > > > > > > the 0.14 release.
> > > > > > > >
> > > > > > > > Shameera is close to bring these tutorials back online, some
> > > > > discussion
> > > > > > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > > > > > >
> > > > > > > > Suresh
> > > > > > > >
> > > > > > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu>
> > wrote:
> > > > > > > >
> > > > > > > > >
> > > > > > > > > I'm playing with airavata 0.14.  I am going through some of
> > the
> > > > > > > > > quickstart tutorials:
> > > > > > > > >
> > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > > > > > >
> > > > > > > > > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > > > > > > > > an obvious release distribution for it.  Is it somewhere
> > > > > > > > > else in the tree?  I was looking in release-artifacts, but
> > > > > > > > > only see:
> > > > > > > > >
> > > > > > > > > release-artifacts$ ls
> > > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > > > > > >
> > > > > > > > > Should I look someplace else?  Did I miss a build step?
> > > > > > > > >
> > > > > > > > > Kenneth
> > > > > > > > >
> > > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > > --
> > > > > > *Best Regards.*
> > > > > >
> > > > > > *Ishara Premadasa,*
> > > > > > http://isharapremadasa.blogspot.com
> > > > >
> > > >
> > > >
> > > >
> > > > --
> > > > Best Regards,
> > > > Shameera Rathnayaka.
> > > >
> > > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > > Blog : http://shameerarathnayaka.blogspot.com/
> >
> 
> 
> 
> -- 
> Best Regards,
> Shameera Rathnayaka.
> 
> email: shameera AT apache.org , shameerainfo AT gmail.com
> Blog : http://shameerarathnayaka.blogspot.com/

Re: xbaya-gui distribution?

Posted by Shameera Rathnayaka <sh...@gmail.com>.
Hi Kenneth,

I am not much familiar with eclipse. But after googling the above issue
found following will help you to resolve classpath issue.

1) Run Configurations

   - Right click on your project
      - then click "Run" -> "Run Configurations..."
      - there check your settings for you project
      - here look into you tab "Classpath" under "User Entries"

2) Project classpath

   - Right click on your project -> "Properties" -> "Java Build Path"
      - now check the "Source" Tab as well as your "Libraries" Tab
      - Problems should be marked red in the "Libraries" tab

Thanks,
Shameera.

On Thu, Oct 23, 2014 at 5:45 PM, K Yoshimoto <ke...@sdsc.edu> wrote:

>
> I did
> git pull
> mvn clean install
> mvn eclipse:clean
> mvn eclipse:eclipse
>
> I am getting an error when trying to run XBaya from Eclipse:
> "The project: airavata-workflow-model-core which is referenced by the
> classpath, does not exist."
>
> Maybe I have some garbage left over in my config somewhere?  Or is
> airavata-workflow-model-core supposed to be there?
>
> I think mvn eclipse:eclipse worked:
> ...
> [INFO]
> [INFO] <<< maven-eclipse-plugin:2.9:eclipse (default-cli) @
> airavata-xbaya-gui <<<
> [INFO]
> [INFO] --- maven-eclipse-plugin:2.9:eclipse (default-cli) @
> airavata-xbaya-gui ---
> [INFO] Using Eclipse Workspace: null
> [INFO] Adding default classpath container:
> org.eclipse.jdt.launching.JRE_CONTAINER
> [INFO] Wrote Eclipse project for "airavata-xbaya-gui" to
> /media/scigap/scigap/javaclient/airavata/modules/xbaya-gui.
> [INFO]
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Reactor Summary:
> [INFO]
> [INFO] Airavata .......................................... SUCCESS [1.564s]
> [INFO] Airavata Configuration ............................ SUCCESS [0.042s]
> [INFO] Airavata Server Configuration ..................... SUCCESS [0.065s]
> [INFO] Airavata Client Configuration ..................... SUCCESS [0.060s]
> [INFO] Airavata API ...................................... SUCCESS [0.086s]
> [INFO] Airavata Data Models .............................. SUCCESS [0.488s]
> [INFO] Airavata Generated Stubs Skeltons ................. SUCCESS [0.211s]
> [INFO] Airavata Model Utilities .......................... SUCCESS [0.157s]
> [INFO] Airavata Commons .................................. SUCCESS [0.063s]
> [INFO] Airavata Common Utilities ......................... SUCCESS [2.065s]
> [INFO] Airavata GFac Schema Utilities .................... SUCCESS [1.323s]
> [INFO] Airavata Credential Store ......................... SUCCESS [1.085s]
> [INFO] Airavata Registry ................................. SUCCESS [0.026s]
> [INFO] Airavata Registry CPI ............................. SUCCESS [0.353s]
> [INFO] Airavata JPA Registry ............................. SUCCESS [1.008s]
> [INFO] Airavata Application Catalog ...................... SUCCESS [0.063s]
> [INFO] Airavata Application Catalog CPI .................. SUCCESS [0.532s]
> [INFO] Airavata Application Catalog Data ................. SUCCESS [0.544s]
> [INFO] Airavata Workflow Execution Context ............... SUCCESS [0.598s]
> [INFO] Airavata WS Messenger ............................. SUCCESS [0.054s]
> [INFO] Airavata Messenger Commons ........................ SUCCESS [0.863s]
> [INFO] Airavata Messenger Client ......................... SUCCESS [0.690s]
> [INFO] Airavata Workflow Tracking ........................ SUCCESS [0.817s]
> [INFO] Airavata Messaging Framework ...................... SUCCESS [0.022s]
> [INFO] Airavata Messaging Framework Core ................. SUCCESS [0.365s]
> [INFO] Airavata GFac ..................................... SUCCESS [0.021s]
> [INFO] Airavata GFac Core ................................ SUCCESS [0.542s]
> [INFO] Airavata Gfac Service ............................. SUCCESS [0.705s]
> [INFO] GSISSH Library .................................... SUCCESS [0.282s]
> [INFO] Airavata GFac GSI-SSH implementation .............. SUCCESS [0.575s]
> [INFO] Airavata GFac SSH implementation .................. SUCCESS [0.737s]
> [INFO] Airavata GFac Grid Job Monitor .................... SUCCESS [2.168s]
> [INFO] Airavata GFac Local implementation ................ SUCCESS [1.005s]
> [INFO] Airavata Orchestrator ............................. SUCCESS [0.046s]
> [INFO] Airavata Orchestrator Core ........................ SUCCESS [1.460s]
> [INFO] Airavata Orchestrator Service ..................... SUCCESS [1.036s]
> [INFO] Airavata Workflow Model Parent .................... SUCCESS [0.023s]
> [INFO] Airavata Workflow Model Core ...................... SUCCESS [0.469s]
> [INFO] Airavata Workflow Component ....................... SUCCESS [0.547s]
> [INFO] Airavata WS Monitor ............................... SUCCESS [0.500s]
> [INFO] Airavata GFac EC2 Implementation .................. SUCCESS [0.638s]
> [INFO] Airavata Workflow Engine .......................... SUCCESS [0.770s]
> [INFO] Airavata API Server ............................... SUCCESS [0.762s]
> [INFO] Airavata Client SDKS .............................. SUCCESS [0.019s]
> [INFO] Apache Airavata PHP SDK ........................... SUCCESS [0.023s]
> [INFO] Airavata Client CPP SDK ........................... SUCCESS [0.045s]
> [INFO] Airavata Client Samples ........................... SUCCESS [0.101s]
> [INFO] Airavata Client ................................... SUCCESS [0.545s]
> [INFO] Airavata GFac Hadoop implementation ............... SUCCESS [1.878s]
> [INFO] Airavata GFac GRAM implementation ................. SUCCESS [0.472s]
> [INFO] Airavata GFac BES implementation .................. SUCCESS [1.400s]
> [INFO] Airavata Security Implementation .................. SUCCESS [0.221s]
> [INFO] Airavata Credential Store Service ................. SUCCESS [0.018s]
> [INFO] airavata-credential-store-webapp .................. SUCCESS [0.359s]
> [INFO] Airavata Orchestrator Client SDK .................. SUCCESS [0.390s]
> [INFO] Airavata Tools .................................... SUCCESS [0.020s]
> [INFO] registry-tool ..................................... SUCCESS [0.052s]
> [INFO] Airavata Standalone Server ........................ SUCCESS [0.493s]
> [INFO] Airavata Test Suite ............................... SUCCESS [0.576s]
> [INFO] distribution ...................................... SUCCESS [0.044s]
> [INFO] Airavata server distribution ...................... SUCCESS [1.686s]
> [INFO] Airavata Client Distribution Parent ............... SUCCESS [0.022s]
> [INFO] Airavata Client Java Distribution ................. SUCCESS [0.522s]
> [INFO] Airavata release artifacts ........................ SUCCESS [0.035s]
> [INFO] Airavata Integration Tests ........................ SUCCESS [0.695s]
> [INFO] Airavata XBaya .................................... SUCCESS [0.680s]
> [INFO]
> ------------------------------------------------------------------------
> [INFO] BUILD SUCCESS
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Total time: 38.665s
> [INFO] Finished at: Thu Oct 23 14:20:59 PDT 2014
> [INFO] Final Memory: 45M/273M
> [INFO]
> ------------------------------------------------------------------------
>
>
>
> On Thu, Oct 23, 2014 at 01:26:57PM -0700, K Yoshimoto wrote:
> >
> > Shameera,
> >
> >  Thanks for the info.  I did not do the mvn eclipse:eclipse.
> > I'll update my repo, then do mvn eclipse:eclipse and delete/load
> > XBaya.  I'll update if it works or if I run into something else.
> >
> > Kenneth
> >
> > On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka wrote:
> > > Hi Yoshimoto,
> > >
> > > I just try to build the latest trunk and i don't see any compilation
> error.
> > > To narrow down the issue, I have few questions for you.
> > > 1. are you working on latest trunk or previous released version? if it
> is
> > > trunk make sure you have latest revision. if it is previous version,
> which
> > > version you are using?
> > > 2. Could you able to build the source code using "mvn clean install"
> > > without any issue?
> > > 3. Did you run mvn eclispse:eclipse command before you open the project
> > > from eclipse?
> > >
> > > According to the error stack it seems eclipse project doesn't has all
> > > required jar in class path."mvn eclipse:eclipse" will solve this issue
> but
> > > to effect the changes, delete the airavata eclipse project and reopen
> the
> > > source code as new project, in other ward reload the eclipse project.
> Now
> > > try to run the XBaya class.
> > >
> > > I am waiting for you answers to my above questions, please let me know
> if
> > > you hit any issue down the path.
> > >
> > > Thanks,
> > > Shameera.
> > >
> > > On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > >
> > > >
> > > > Hi,
> > > >
> > > >  I am trying to start up the XBaya GUI from Eclipse, but get
> > > > an error about missing type ErrorWindow.  Has anyone seen this?
> > > > Where is ErrorWindow supposed to come from?
> > > >
> > > > SLF4J: Class path contains multiple SLF4J bindings.
> > > > SLF4J: Found binding in
> > > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > SLF4J: Found binding in
> > > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > SLF4J: Found binding in
> > > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > SLF4J: Found binding in
> > > >
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
> > > > explanation.
> > > > SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
> > > > Exception in thread "main" java.lang.Error: Unresolved compilation
> > > > problems:
> > > >         The method getErrorWindow() from the type XBayaGUI refers to
> the
> > > > missing type ErrorWindow
> > > >         The method getErrorWindow() from the type XBayaGUI refers to
> the
> > > > missing type ErrorWindow
> > > >
> > > >         at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
> > > >         at org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
> > > >
> > > > Thanks,
> > > > Kenneth
> > > >
> > > > On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> > > > > Hi Kenneth,
> > > > >
> > > > > I have attached a sample guide on how to run a simple workflow with
> > > > > Airavata in the thread 'Unable to start Airavata after the source
> build'
> > > > .
> > > > > I think you can refer to that till the Quickstart tutorials are
> > > > officially
> > > > > online.
> > > > >
> > > > > In order to answer you question, the XBaya GUI binary distribution
> is not
> > > > > yet present in the trunk. Therefore at present XBaya GUI can't be
> started
> > > > > by extracting XBaya GUI archive. Instead the GUI client is started
> by
> > > > > directly running org.apache.airavata.xbaya.XBaya class through an
> IDE.
> > > > >
> > > > > Hope this helps.
> > > > >
> > > > > Thanks!
> > > > > Ishara
> > > > >
> > > > > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <ke...@sdsc.edu>
> wrote:
> > > > >
> > > > > >
> > > > > > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > > > > > things are more up-to-date.  If you notice things are ready,
> > > > > > could you ping me also?
> > > > > >
> > > > > > Kenneth
> > > > > >
> > > > > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > > > > > Hi Kenneth,
> > > > > > >
> > > > > > > Sorry the tutorials are out of date and we are trying to fix
> them
> > > > with
> > > > > > the 0.14 release.
> > > > > > >
> > > > > > > Shameera is close to bring these tutorials back online, some
> > > > discussion
> > > > > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > > > > >
> > > > > > > Suresh
> > > > > > >
> > > > > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu>
> wrote:
> > > > > > >
> > > > > > > >
> > > > > > > > I'm playing with airavata 0.14.  I am going through some of
> the
> > > > > > > > quickstart tutorials:
> > > > > > > >
> http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > > > > >
> > > > > > > > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > > > > > > > an obvious release distribution for it.  Is it somewhere
> > > > > > > > else in the tree?  I was looking in release-artifacts, but
> > > > > > > > only see:
> > > > > > > >
> > > > > > > > release-artifacts$ ls
> > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > > > > >
> > > > > > > > Should I look someplace else?  Did I miss a build step?
> > > > > > > >
> > > > > > > > Kenneth
> > > > > > > >
> > > > > >
> > > > >
> > > > >
> > > > >
> > > > > --
> > > > > *Best Regards.*
> > > > >
> > > > > *Ishara Premadasa,*
> > > > > http://isharapremadasa.blogspot.com
> > > >
> > >
> > >
> > >
> > > --
> > > Best Regards,
> > > Shameera Rathnayaka.
> > >
> > > email: shameera AT apache.org , shameerainfo AT gmail.com
> > > Blog : http://shameerarathnayaka.blogspot.com/
>



-- 
Best Regards,
Shameera Rathnayaka.

email: shameera AT apache.org , shameerainfo AT gmail.com
Blog : http://shameerarathnayaka.blogspot.com/

Re: xbaya-gui distribution?

Posted by K Yoshimoto <ke...@sdsc.edu>.
I did
git pull
mvn clean install
mvn eclipse:clean
mvn eclipse:eclipse

I am getting an error when trying to run XBaya from Eclipse:
"The project: airavata-workflow-model-core which is referenced by the classpath, does not exist."

Maybe I have some garbage left over in my config somewhere?  Or is
airavata-workflow-model-core supposed to be there?

I think mvn eclipse:eclipse worked:
...
[INFO]
[INFO] <<< maven-eclipse-plugin:2.9:eclipse (default-cli) @ airavata-xbaya-gui <<<
[INFO]
[INFO] --- maven-eclipse-plugin:2.9:eclipse (default-cli) @ airavata-xbaya-gui ---
[INFO] Using Eclipse Workspace: null
[INFO] Adding default classpath container: org.eclipse.jdt.launching.JRE_CONTAINER
[INFO] Wrote Eclipse project for "airavata-xbaya-gui" to /media/scigap/scigap/javaclient/airavata/modules/xbaya-gui.
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Airavata .......................................... SUCCESS [1.564s]
[INFO] Airavata Configuration ............................ SUCCESS [0.042s]
[INFO] Airavata Server Configuration ..................... SUCCESS [0.065s]
[INFO] Airavata Client Configuration ..................... SUCCESS [0.060s]
[INFO] Airavata API ...................................... SUCCESS [0.086s]
[INFO] Airavata Data Models .............................. SUCCESS [0.488s]
[INFO] Airavata Generated Stubs Skeltons ................. SUCCESS [0.211s]
[INFO] Airavata Model Utilities .......................... SUCCESS [0.157s]
[INFO] Airavata Commons .................................. SUCCESS [0.063s]
[INFO] Airavata Common Utilities ......................... SUCCESS [2.065s]
[INFO] Airavata GFac Schema Utilities .................... SUCCESS [1.323s]
[INFO] Airavata Credential Store ......................... SUCCESS [1.085s]
[INFO] Airavata Registry ................................. SUCCESS [0.026s]
[INFO] Airavata Registry CPI ............................. SUCCESS [0.353s]
[INFO] Airavata JPA Registry ............................. SUCCESS [1.008s]
[INFO] Airavata Application Catalog ...................... SUCCESS [0.063s]
[INFO] Airavata Application Catalog CPI .................. SUCCESS [0.532s]
[INFO] Airavata Application Catalog Data ................. SUCCESS [0.544s]
[INFO] Airavata Workflow Execution Context ............... SUCCESS [0.598s]
[INFO] Airavata WS Messenger ............................. SUCCESS [0.054s]
[INFO] Airavata Messenger Commons ........................ SUCCESS [0.863s]
[INFO] Airavata Messenger Client ......................... SUCCESS [0.690s]
[INFO] Airavata Workflow Tracking ........................ SUCCESS [0.817s]
[INFO] Airavata Messaging Framework ...................... SUCCESS [0.022s]
[INFO] Airavata Messaging Framework Core ................. SUCCESS [0.365s]
[INFO] Airavata GFac ..................................... SUCCESS [0.021s]
[INFO] Airavata GFac Core ................................ SUCCESS [0.542s]
[INFO] Airavata Gfac Service ............................. SUCCESS [0.705s]
[INFO] GSISSH Library .................................... SUCCESS [0.282s]
[INFO] Airavata GFac GSI-SSH implementation .............. SUCCESS [0.575s]
[INFO] Airavata GFac SSH implementation .................. SUCCESS [0.737s]
[INFO] Airavata GFac Grid Job Monitor .................... SUCCESS [2.168s]
[INFO] Airavata GFac Local implementation ................ SUCCESS [1.005s]
[INFO] Airavata Orchestrator ............................. SUCCESS [0.046s]
[INFO] Airavata Orchestrator Core ........................ SUCCESS [1.460s]
[INFO] Airavata Orchestrator Service ..................... SUCCESS [1.036s]
[INFO] Airavata Workflow Model Parent .................... SUCCESS [0.023s]
[INFO] Airavata Workflow Model Core ...................... SUCCESS [0.469s]
[INFO] Airavata Workflow Component ....................... SUCCESS [0.547s]
[INFO] Airavata WS Monitor ............................... SUCCESS [0.500s]
[INFO] Airavata GFac EC2 Implementation .................. SUCCESS [0.638s]
[INFO] Airavata Workflow Engine .......................... SUCCESS [0.770s]
[INFO] Airavata API Server ............................... SUCCESS [0.762s]
[INFO] Airavata Client SDKS .............................. SUCCESS [0.019s]
[INFO] Apache Airavata PHP SDK ........................... SUCCESS [0.023s]
[INFO] Airavata Client CPP SDK ........................... SUCCESS [0.045s]
[INFO] Airavata Client Samples ........................... SUCCESS [0.101s]
[INFO] Airavata Client ................................... SUCCESS [0.545s]
[INFO] Airavata GFac Hadoop implementation ............... SUCCESS [1.878s]
[INFO] Airavata GFac GRAM implementation ................. SUCCESS [0.472s]
[INFO] Airavata GFac BES implementation .................. SUCCESS [1.400s]
[INFO] Airavata Security Implementation .................. SUCCESS [0.221s]
[INFO] Airavata Credential Store Service ................. SUCCESS [0.018s]
[INFO] airavata-credential-store-webapp .................. SUCCESS [0.359s]
[INFO] Airavata Orchestrator Client SDK .................. SUCCESS [0.390s]
[INFO] Airavata Tools .................................... SUCCESS [0.020s]
[INFO] registry-tool ..................................... SUCCESS [0.052s]
[INFO] Airavata Standalone Server ........................ SUCCESS [0.493s]
[INFO] Airavata Test Suite ............................... SUCCESS [0.576s]
[INFO] distribution ...................................... SUCCESS [0.044s]
[INFO] Airavata server distribution ...................... SUCCESS [1.686s]
[INFO] Airavata Client Distribution Parent ............... SUCCESS [0.022s]
[INFO] Airavata Client Java Distribution ................. SUCCESS [0.522s]
[INFO] Airavata release artifacts ........................ SUCCESS [0.035s]
[INFO] Airavata Integration Tests ........................ SUCCESS [0.695s]
[INFO] Airavata XBaya .................................... SUCCESS [0.680s]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 38.665s
[INFO] Finished at: Thu Oct 23 14:20:59 PDT 2014
[INFO] Final Memory: 45M/273M
[INFO] ------------------------------------------------------------------------



On Thu, Oct 23, 2014 at 01:26:57PM -0700, K Yoshimoto wrote:
> 
> Shameera,
> 
>  Thanks for the info.  I did not do the mvn eclipse:eclipse.
> I'll update my repo, then do mvn eclipse:eclipse and delete/load
> XBaya.  I'll update if it works or if I run into something else.
> 
> Kenneth
> 
> On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka wrote:
> > Hi Yoshimoto,
> > 
> > I just try to build the latest trunk and i don't see any compilation error.
> > To narrow down the issue, I have few questions for you.
> > 1. are you working on latest trunk or previous released version? if it is
> > trunk make sure you have latest revision. if it is previous version, which
> > version you are using?
> > 2. Could you able to build the source code using "mvn clean install"
> > without any issue?
> > 3. Did you run mvn eclispse:eclipse command before you open the project
> > from eclipse?
> > 
> > According to the error stack it seems eclipse project doesn't has all
> > required jar in class path."mvn eclipse:eclipse" will solve this issue but
> > to effect the changes, delete the airavata eclipse project and reopen the
> > source code as new project, in other ward reload the eclipse project. Now
> > try to run the XBaya class.
> > 
> > I am waiting for you answers to my above questions, please let me know if
> > you hit any issue down the path.
> > 
> > Thanks,
> > Shameera.
> > 
> > On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > 
> > >
> > > Hi,
> > >
> > >  I am trying to start up the XBaya GUI from Eclipse, but get
> > > an error about missing type ErrorWindow.  Has anyone seen this?
> > > Where is ErrorWindow supposed to come from?
> > >
> > > SLF4J: Class path contains multiple SLF4J bindings.
> > > SLF4J: Found binding in
> > > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > SLF4J: Found binding in
> > > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > SLF4J: Found binding in
> > > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > SLF4J: Found binding in
> > > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
> > > explanation.
> > > SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
> > > Exception in thread "main" java.lang.Error: Unresolved compilation
> > > problems:
> > >         The method getErrorWindow() from the type XBayaGUI refers to the
> > > missing type ErrorWindow
> > >         The method getErrorWindow() from the type XBayaGUI refers to the
> > > missing type ErrorWindow
> > >
> > >         at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
> > >         at org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
> > >
> > > Thanks,
> > > Kenneth
> > >
> > > On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> > > > Hi Kenneth,
> > > >
> > > > I have attached a sample guide on how to run a simple workflow with
> > > > Airavata in the thread 'Unable to start Airavata after the source build'
> > > .
> > > > I think you can refer to that till the Quickstart tutorials are
> > > officially
> > > > online.
> > > >
> > > > In order to answer you question, the XBaya GUI binary distribution is not
> > > > yet present in the trunk. Therefore at present XBaya GUI can't be started
> > > > by extracting XBaya GUI archive. Instead the GUI client is started by
> > > > directly running org.apache.airavata.xbaya.XBaya class through an IDE.
> > > >
> > > > Hope this helps.
> > > >
> > > > Thanks!
> > > > Ishara
> > > >
> > > > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > > >
> > > > >
> > > > > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > > > > things are more up-to-date.  If you notice things are ready,
> > > > > could you ping me also?
> > > > >
> > > > > Kenneth
> > > > >
> > > > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > > > > Hi Kenneth,
> > > > > >
> > > > > > Sorry the tutorials are out of date and we are trying to fix them
> > > with
> > > > > the 0.14 release.
> > > > > >
> > > > > > Shameera is close to bring these tutorials back online, some
> > > discussion
> > > > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > > > >
> > > > > > Suresh
> > > > > >
> > > > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > > > > >
> > > > > > >
> > > > > > > I'm playing with airavata 0.14.  I am going through some of the
> > > > > > > quickstart tutorials:
> > > > > > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > > > >
> > > > > > > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > > > > > > an obvious release distribution for it.  Is it somewhere
> > > > > > > else in the tree?  I was looking in release-artifacts, but
> > > > > > > only see:
> > > > > > >
> > > > > > > release-artifacts$ ls
> > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > > > >
> > > > > > > Should I look someplace else?  Did I miss a build step?
> > > > > > >
> > > > > > > Kenneth
> > > > > > >
> > > > >
> > > >
> > > >
> > > >
> > > > --
> > > > *Best Regards.*
> > > >
> > > > *Ishara Premadasa,*
> > > > http://isharapremadasa.blogspot.com
> > >
> > 
> > 
> > 
> > -- 
> > Best Regards,
> > Shameera Rathnayaka.
> > 
> > email: shameera AT apache.org , shameerainfo AT gmail.com
> > Blog : http://shameerarathnayaka.blogspot.com/

Re: xbaya-gui distribution?

Posted by K Yoshimoto <ke...@sdsc.edu>.
Shameera,

 Thanks for the info.  I did not do the mvn eclipse:eclipse.
I'll update my repo, then do mvn eclipse:eclipse and delete/load
XBaya.  I'll update if it works or if I run into something else.

Kenneth

On Thu, Oct 23, 2014 at 04:13:34PM -0400, Shameera Rathnayaka wrote:
> Hi Yoshimoto,
> 
> I just try to build the latest trunk and i don't see any compilation error.
> To narrow down the issue, I have few questions for you.
> 1. are you working on latest trunk or previous released version? if it is
> trunk make sure you have latest revision. if it is previous version, which
> version you are using?
> 2. Could you able to build the source code using "mvn clean install"
> without any issue?
> 3. Did you run mvn eclispse:eclipse command before you open the project
> from eclipse?
> 
> According to the error stack it seems eclipse project doesn't has all
> required jar in class path."mvn eclipse:eclipse" will solve this issue but
> to effect the changes, delete the airavata eclipse project and reopen the
> source code as new project, in other ward reload the eclipse project. Now
> try to run the XBaya class.
> 
> I am waiting for you answers to my above questions, please let me know if
> you hit any issue down the path.
> 
> Thanks,
> Shameera.
> 
> On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> 
> >
> > Hi,
> >
> >  I am trying to start up the XBaya GUI from Eclipse, but get
> > an error about missing type ErrorWindow.  Has anyone seen this?
> > Where is ErrorWindow supposed to come from?
> >
> > SLF4J: Class path contains multiple SLF4J bindings.
> > SLF4J: Found binding in
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > SLF4J: Found binding in
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > SLF4J: Found binding in
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > SLF4J: Found binding in
> > [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> > SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
> > explanation.
> > SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
> > Exception in thread "main" java.lang.Error: Unresolved compilation
> > problems:
> >         The method getErrorWindow() from the type XBayaGUI refers to the
> > missing type ErrorWindow
> >         The method getErrorWindow() from the type XBayaGUI refers to the
> > missing type ErrorWindow
> >
> >         at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
> >         at org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
> >
> > Thanks,
> > Kenneth
> >
> > On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> > > Hi Kenneth,
> > >
> > > I have attached a sample guide on how to run a simple workflow with
> > > Airavata in the thread 'Unable to start Airavata after the source build'
> > .
> > > I think you can refer to that till the Quickstart tutorials are
> > officially
> > > online.
> > >
> > > In order to answer you question, the XBaya GUI binary distribution is not
> > > yet present in the trunk. Therefore at present XBaya GUI can't be started
> > > by extracting XBaya GUI archive. Instead the GUI client is started by
> > > directly running org.apache.airavata.xbaya.XBaya class through an IDE.
> > >
> > > Hope this helps.
> > >
> > > Thanks!
> > > Ishara
> > >
> > > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > >
> > > >
> > > > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > > > things are more up-to-date.  If you notice things are ready,
> > > > could you ping me also?
> > > >
> > > > Kenneth
> > > >
> > > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > > > Hi Kenneth,
> > > > >
> > > > > Sorry the tutorials are out of date and we are trying to fix them
> > with
> > > > the 0.14 release.
> > > > >
> > > > > Shameera is close to bring these tutorials back online, some
> > discussion
> > > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > > >
> > > > > Suresh
> > > > >
> > > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > > > >
> > > > > >
> > > > > > I'm playing with airavata 0.14.  I am going through some of the
> > > > > > quickstart tutorials:
> > > > > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > > >
> > > > > > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > > > > > an obvious release distribution for it.  Is it somewhere
> > > > > > else in the tree?  I was looking in release-artifacts, but
> > > > > > only see:
> > > > > >
> > > > > > release-artifacts$ ls
> > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > > >
> > > > > > Should I look someplace else?  Did I miss a build step?
> > > > > >
> > > > > > Kenneth
> > > > > >
> > > >
> > >
> > >
> > >
> > > --
> > > *Best Regards.*
> > >
> > > *Ishara Premadasa,*
> > > http://isharapremadasa.blogspot.com
> >
> 
> 
> 
> -- 
> Best Regards,
> Shameera Rathnayaka.
> 
> email: shameera AT apache.org , shameerainfo AT gmail.com
> Blog : http://shameerarathnayaka.blogspot.com/

Re: xbaya-gui distribution?

Posted by Shameera Rathnayaka <sh...@gmail.com>.
Hi Yoshimoto,

I just try to build the latest trunk and i don't see any compilation error.
To narrow down the issue, I have few questions for you.
1. are you working on latest trunk or previous released version? if it is
trunk make sure you have latest revision. if it is previous version, which
version you are using?
2. Could you able to build the source code using "mvn clean install"
without any issue?
3. Did you run mvn eclispse:eclipse command before you open the project
from eclipse?

According to the error stack it seems eclipse project doesn't has all
required jar in class path."mvn eclipse:eclipse" will solve this issue but
to effect the changes, delete the airavata eclipse project and reopen the
source code as new project, in other ward reload the eclipse project. Now
try to run the XBaya class.

I am waiting for you answers to my above questions, please let me know if
you hit any issue down the path.

Thanks,
Shameera.

On Thu, Oct 23, 2014 at 3:46 PM, K Yoshimoto <ke...@sdsc.edu> wrote:

>
> Hi,
>
>  I am trying to start up the XBaya GUI from Eclipse, but get
> an error about missing type ErrorWindow.  Has anyone seen this?
> Where is ErrorWindow supposed to come from?
>
> SLF4J: Class path contains multiple SLF4J bindings.
> SLF4J: Found binding in
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> SLF4J: Found binding in
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> SLF4J: Found binding in
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> SLF4J: Found binding in
> [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
> SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
> explanation.
> SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
> Exception in thread "main" java.lang.Error: Unresolved compilation
> problems:
>         The method getErrorWindow() from the type XBayaGUI refers to the
> missing type ErrorWindow
>         The method getErrorWindow() from the type XBayaGUI refers to the
> missing type ErrorWindow
>
>         at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
>         at org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)
>
> Thanks,
> Kenneth
>
> On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> > Hi Kenneth,
> >
> > I have attached a sample guide on how to run a simple workflow with
> > Airavata in the thread 'Unable to start Airavata after the source build'
> .
> > I think you can refer to that till the Quickstart tutorials are
> officially
> > online.
> >
> > In order to answer you question, the XBaya GUI binary distribution is not
> > yet present in the trunk. Therefore at present XBaya GUI can't be started
> > by extracting XBaya GUI archive. Instead the GUI client is started by
> > directly running org.apache.airavata.xbaya.XBaya class through an IDE.
> >
> > Hope this helps.
> >
> > Thanks!
> > Ishara
> >
> > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> >
> > >
> > > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > > things are more up-to-date.  If you notice things are ready,
> > > could you ping me also?
> > >
> > > Kenneth
> > >
> > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > > Hi Kenneth,
> > > >
> > > > Sorry the tutorials are out of date and we are trying to fix them
> with
> > > the 0.14 release.
> > > >
> > > > Shameera is close to bring these tutorials back online, some
> discussion
> > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > >
> > > > Suresh
> > > >
> > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > > >
> > > > >
> > > > > I'm playing with airavata 0.14.  I am going through some of the
> > > > > quickstart tutorials:
> > > > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > >
> > > > > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > > > > an obvious release distribution for it.  Is it somewhere
> > > > > else in the tree?  I was looking in release-artifacts, but
> > > > > only see:
> > > > >
> > > > > release-artifacts$ ls
> > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > >
> > > > > Should I look someplace else?  Did I miss a build step?
> > > > >
> > > > > Kenneth
> > > > >
> > >
> >
> >
> >
> > --
> > *Best Regards.*
> >
> > *Ishara Premadasa,*
> > http://isharapremadasa.blogspot.com
>



-- 
Best Regards,
Shameera Rathnayaka.

email: shameera AT apache.org , shameerainfo AT gmail.com
Blog : http://shameerarathnayaka.blogspot.com/

Re: xbaya-gui distribution?

Posted by K Yoshimoto <ke...@sdsc.edu>.
Hi,

 I am trying to start up the XBaya GUI from Eclipse, but get
an error about missing type ErrorWindow.  Has anyone seen this?
Where is ErrorWindow supposed to come from?

SLF4J: Class path contains multiple SLF4J bindings.
SLF4J: Found binding in [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation.
SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
Exception in thread "main" java.lang.Error: Unresolved compilation problems: 
	The method getErrorWindow() from the type XBayaGUI refers to the missing type ErrorWindow
	The method getErrorWindow() from the type XBayaGUI refers to the missing type ErrorWindow

	at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
	at org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)

Thanks,
Kenneth

On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> Hi Kenneth,
> 
> I have attached a sample guide on how to run a simple workflow with
> Airavata in the thread 'Unable to start Airavata after the source build' .
> I think you can refer to that till the Quickstart tutorials are officially
> online.
> 
> In order to answer you question, the XBaya GUI binary distribution is not
> yet present in the trunk. Therefore at present XBaya GUI can't be started
> by extracting XBaya GUI archive. Instead the GUI client is started by
> directly running org.apache.airavata.xbaya.XBaya class through an IDE.
> 
> Hope this helps.
> 
> Thanks!
> Ishara
> 
> On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> 
> >
> > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > things are more up-to-date.  If you notice things are ready,
> > could you ping me also?
> >
> > Kenneth
> >
> > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > Hi Kenneth,
> > >
> > > Sorry the tutorials are out of date and we are trying to fix them with
> > the 0.14 release.
> > >
> > > Shameera is close to bring these tutorials back online, some discussion
> > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > >
> > > Suresh
> > >
> > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > >
> > > >
> > > > I'm playing with airavata 0.14.  I am going through some of the
> > > > quickstart tutorials:
> > > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > >
> > > > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > > > an obvious release distribution for it.  Is it somewhere
> > > > else in the tree?  I was looking in release-artifacts, but
> > > > only see:
> > > >
> > > > release-artifacts$ ls
> > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > >
> > > > Should I look someplace else?  Did I miss a build step?
> > > >
> > > > Kenneth
> > > >
> >
> 
> 
> 
> -- 
> *Best Regards.*
> 
> *Ishara Premadasa,*
> http://isharapremadasa.blogspot.com

Re: xbaya-gui distribution?

Posted by K Yoshimoto <ke...@sdsc.edu>.
I'm trying to run Xbaya.java in Eclipse, but ran into an error.
Not sure if I'm importing into Eclipse incorrectly, or if there
is another cause.  Am I missing a file with ErrorWindow?

SLF4J: Class path contains multiple SLF4J bindings.
SLF4J: Found binding in [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/media/scigap/scigap/javaclient/airavata/modules/credential-store-service/credential-store-webapp/target/credential-store/WEB-INF/lib/slf4j-simple-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/media/scigap/scigap/javaclient/airavata/modules/integration-tests/target/apache-airavata-server-0.14-SNAPSHOT/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/media/scigap/scigap/javaclient/airavata/modules/workflow-model/workflow-engine/target/jnlp/lib/slf4j-log4j12-1.7.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation.
SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
Exception in thread "main" java.lang.Error: Unresolved compilation problems: 
	The method getErrorWindow() from the type XBayaGUI refers to the missing type ErrorWindow
	The method getErrorWindow() from the type XBayaGUI refers to the missing type ErrorWindow

	at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:56)
	at org.apache.airavata.xbaya.XBaya.main(XBaya.java:270)



On Thu, Oct 16, 2014 at 09:49:47AM -0700, K Yoshimoto wrote:
> 
> Thanks, Ishara.  I'll give it a try.
> 
> Kenneth
> 
> On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> > Hi Kenneth,
> > 
> > I have attached a sample guide on how to run a simple workflow with
> > Airavata in the thread 'Unable to start Airavata after the source build' .
> > I think you can refer to that till the Quickstart tutorials are officially
> > online.
> > 
> > In order to answer you question, the XBaya GUI binary distribution is not
> > yet present in the trunk. Therefore at present XBaya GUI can't be started
> > by extracting XBaya GUI archive. Instead the GUI client is started by
> > directly running org.apache.airavata.xbaya.XBaya class through an IDE.
> > 
> > Hope this helps.
> > 
> > Thanks!
> > Ishara
> > 
> > On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > 
> > >
> > > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > > things are more up-to-date.  If you notice things are ready,
> > > could you ping me also?
> > >
> > > Kenneth
> > >
> > > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > > Hi Kenneth,
> > > >
> > > > Sorry the tutorials are out of date and we are trying to fix them with
> > > the 0.14 release.
> > > >
> > > > Shameera is close to bring these tutorials back online, some discussion
> > > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > > >
> > > > Suresh
> > > >
> > > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > > >
> > > > >
> > > > > I'm playing with airavata 0.14.  I am going through some of the
> > > > > quickstart tutorials:
> > > > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > > >
> > > > > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > > > > an obvious release distribution for it.  Is it somewhere
> > > > > else in the tree?  I was looking in release-artifacts, but
> > > > > only see:
> > > > >
> > > > > release-artifacts$ ls
> > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > > >
> > > > > Should I look someplace else?  Did I miss a build step?
> > > > >
> > > > > Kenneth
> > > > >
> > >
> > 
> > 
> > 
> > -- 
> > *Best Regards.*
> > 
> > *Ishara Premadasa,*
> > http://isharapremadasa.blogspot.com

Re: xbaya-gui distribution?

Posted by K Yoshimoto <ke...@sdsc.edu>.
Thanks, Ishara.  I'll give it a try.

Kenneth

On Thu, Oct 16, 2014 at 08:19:36AM -0400, ishara premadasa wrote:
> Hi Kenneth,
> 
> I have attached a sample guide on how to run a simple workflow with
> Airavata in the thread 'Unable to start Airavata after the source build' .
> I think you can refer to that till the Quickstart tutorials are officially
> online.
> 
> In order to answer you question, the XBaya GUI binary distribution is not
> yet present in the trunk. Therefore at present XBaya GUI can't be started
> by extracting XBaya GUI archive. Instead the GUI client is started by
> directly running org.apache.airavata.xbaya.XBaya class through an IDE.
> 
> Hope this helps.
> 
> Thanks!
> Ishara
> 
> On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> 
> >
> > Thanks, Suresh.  I'll keep an eye on the dev list to see when
> > things are more up-to-date.  If you notice things are ready,
> > could you ping me also?
> >
> > Kenneth
> >
> > On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > > Hi Kenneth,
> > >
> > > Sorry the tutorials are out of date and we are trying to fix them with
> > the 0.14 release.
> > >
> > > Shameera is close to bring these tutorials back online, some discussion
> > here - http://markmail.org/thread/6dtvhd7posjosnvv
> > >
> > > Suresh
> > >
> > > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> > >
> > > >
> > > > I'm playing with airavata 0.14.  I am going through some of the
> > > > quickstart tutorials:
> > > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > > >
> > > > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > > > an obvious release distribution for it.  Is it somewhere
> > > > else in the tree?  I was looking in release-artifacts, but
> > > > only see:
> > > >
> > > > release-artifacts$ ls
> > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > > >
> > > > Should I look someplace else?  Did I miss a build step?
> > > >
> > > > Kenneth
> > > >
> >
> 
> 
> 
> -- 
> *Best Regards.*
> 
> *Ishara Premadasa,*
> http://isharapremadasa.blogspot.com

Re: xbaya-gui distribution?

Posted by ishara premadasa <id...@gmail.com>.
Hi Kenneth,

I have attached a sample guide on how to run a simple workflow with
Airavata in the thread 'Unable to start Airavata after the source build' .
I think you can refer to that till the Quickstart tutorials are officially
online.

In order to answer you question, the XBaya GUI binary distribution is not
yet present in the trunk. Therefore at present XBaya GUI can't be started
by extracting XBaya GUI archive. Instead the GUI client is started by
directly running org.apache.airavata.xbaya.XBaya class through an IDE.

Hope this helps.

Thanks!
Ishara

On Wed, Oct 15, 2014 at 4:03 PM, K Yoshimoto <ke...@sdsc.edu> wrote:

>
> Thanks, Suresh.  I'll keep an eye on the dev list to see when
> things are more up-to-date.  If you notice things are ready,
> could you ping me also?
>
> Kenneth
>
> On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> > Hi Kenneth,
> >
> > Sorry the tutorials are out of date and we are trying to fix them with
> the 0.14 release.
> >
> > Shameera is close to bring these tutorials back online, some discussion
> here - http://markmail.org/thread/6dtvhd7posjosnvv
> >
> > Suresh
> >
> > On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> >
> > >
> > > I'm playing with airavata 0.14.  I am going through some of the
> > > quickstart tutorials:
> > > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > >
> > > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > > an obvious release distribution for it.  Is it somewhere
> > > else in the tree?  I was looking in release-artifacts, but
> > > only see:
> > >
> > > release-artifacts$ ls
> > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > >
> > > Should I look someplace else?  Did I miss a build step?
> > >
> > > Kenneth
> > >
>



-- 
*Best Regards.*

*Ishara Premadasa,*
http://isharapremadasa.blogspot.com

Re: xbaya-gui distribution?

Posted by K Yoshimoto <ke...@sdsc.edu>.
Thanks, Suresh.  I'll keep an eye on the dev list to see when
things are more up-to-date.  If you notice things are ready,
could you ping me also?

Kenneth

On Wed, Oct 15, 2014 at 03:56:46PM -0400, Suresh Marru wrote:
> Hi Kenneth,
> 
> Sorry the tutorials are out of date and we are trying to fix them with the 0.14 release. 
> 
> Shameera is close to bring these tutorials back online, some discussion here - http://markmail.org/thread/6dtvhd7posjosnvv
> 
> Suresh
> 
> On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu> wrote:
> 
> > 
> > I'm playing with airavata 0.14.  I am going through some of the
> > quickstart tutorials:
> > http://airavata.apache.org/documentation/quickstart-tutorials.html
> > 
> > I'm at the step of firing up xbaya-gui, but I'm not seeing
> > an obvious release distribution for it.  Is it somewhere
> > else in the tree?  I was looking in release-artifacts, but
> > only see:
> > 
> > release-artifacts$ ls
> > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> > apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> > apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> > apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> > apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> > apache-airavata-server-0.14-SNAPSHOT-bin.zip
> > 
> > Should I look someplace else?  Did I miss a build step?
> > 
> > Kenneth
> > 

Re: xbaya-gui distribution?

Posted by Suresh Marru <sm...@apache.org>.
Hi Kenneth,

Sorry the tutorials are out of date and we are trying to fix them with the 0.14 release. 

Shameera is close to bring these tutorials back online, some discussion here - http://markmail.org/thread/6dtvhd7posjosnvv

Suresh

On Oct 15, 2014, at 3:34 PM, K Yoshimoto <ke...@sdsc.edu> wrote:

> 
> I'm playing with airavata 0.14.  I am going through some of the
> quickstart tutorials:
> http://airavata.apache.org/documentation/quickstart-tutorials.html
> 
> I'm at the step of firing up xbaya-gui, but I'm not seeing
> an obvious release distribution for it.  Is it somewhere
> else in the tree?  I was looking in release-artifacts, but
> only see:
> 
> release-artifacts$ ls
> apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.tar.gz
> apache-airavata-client-cpp-sdk-0.14-SNAPSHOT-bin.zip
> apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.tar.gz
> apache-airavata-client-java-sdk-0.14-SNAPSHOT-bin.zip
> apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.tar.gz
> apache-airavata-client-php-sdk-0.14-SNAPSHOT-bin.zip
> apache-airavata-server-0.14-SNAPSHOT-bin.tar.gz
> apache-airavata-server-0.14-SNAPSHOT-bin.zip
> 
> Should I look someplace else?  Did I miss a build step?
> 
> Kenneth
>