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Posted to commits@taverna.apache.org by st...@apache.org on 2016/06/30 15:25:00 UTC
svn commit: r1750817 [3/40] - in
/incubator/taverna/site/trunk/content/javadoc/taverna-engine: ./
org/apache/taverna/activities/dataflow/
org/apache/taverna/activities/dataflow/class-use/
org/apache/taverna/activities/stringconstant/ org/apache/taverna...
Modified: incubator/taverna/site/trunk/content/javadoc/taverna-engine/index-all.html
URL: http://svn.apache.org/viewvc/incubator/taverna/site/trunk/content/javadoc/taverna-engine/index-all.html?rev=1750817&r1=1750816&r2=1750817&view=diff
==============================================================================
--- incubator/taverna/site/trunk/content/javadoc/taverna-engine/index-all.html (original)
+++ incubator/taverna/site/trunk/content/javadoc/taverna-engine/index-all.html Thu Jun 30 15:24:53 2016
@@ -2,10 +2,10 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:16 GMT 2016 -->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:52 BST 2016 -->
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Index (Apache Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Index (Apache Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
<script type="text/javascript" src="script.js"></script>
</head>
@@ -13,7 +13,7 @@
<script type="text/javascript"><!--
try {
if (location.href.indexOf('is-external=true') == -1) {
- parent.document.title="Index (Apache Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)";
+ parent.document.title="Index (Apache Taverna Engine and Platform 3.1.0-incubating API)";
}
}
catch(err) {
@@ -70,7 +70,7 @@
<!-- -->
</a></div>
<!-- ========= END OF TOP NAVBAR ========= -->
-<div class="contentContainer"><a href="#I:A">A</a> <a href="#I:B">B</a> <a href="#I:C">C</a> <a href="#I:D">D</a> <a href="#I:E">E</a> <a href="#I:F">F</a> <a href="#I:G">G</a> <a href="#I:H">H</a> <a href="#I:I">I</a> <a href="#I:J">J</a> <a href="#I:K">K</a> <a href="#I:L">L</a> <a href="#I:M">M</a> <a href="#I:N">N</a> <a href="#I:O">O</a> <a href="#I:P">P</a> <a href="#I:Q">Q</a> <a href="#I:R">R</a> <a href="#I:S">S</a> <a href="#I:T">T</a> <a href="#I:U">U</a> <a href="#I:V">V</a> <a href="#I:W">W</a> <a href="#I:Y">Y</a> <a name="I:A">
+<div class="contentContainer"><a href="#I:A">A</a> <a href="#I:B">B</a> <a href="#I:C">C</a> <a href="#I:D">D</a> <a href="#I:E">E</a> <a href="#I:F">F</a> <a href="#I:G">G</a> <a href="#I:H">H</a> <a href="#I:I">I</a> <a href="#I:J">J</a> <a href="#I:K">K</a> <a href="#I:L">L</a> <a href="#I:M">M</a> <a href="#I:N">N</a> <a href="#I:O">O</a> <a href="#I:P">P</a> <a href="#I:R">R</a> <a href="#I:S">S</a> <a href="#I:T">T</a> <a href="#I:U">U</a> <a href="#I:V">V</a> <a href="#I:W">W</a> <a href="#I:Y">Y</a> <a name="I:A">
<!-- -->
</a>
<h2 class="title">A</h2>
@@ -317,10 +317,6 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.InvokeCallBack.html#activity">activity</a></span> - Variable in class org.apache.taverna.workflowmodel.processor.dispatch.layers.<a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.InvokeCallBack.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.layers">Invoke.InvokeCallBack</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#Activity">Activity</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#activity">activity</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/workflowmodel/processor/activity/ActivityAndBeanWrapper.html" title="class in org.apache.taverna.workflowmodel.processor.activity"><span class="typeNameLink">ActivityAndBeanWrapper</span></a> - Class in <a href="org/apache/taverna/workflowmodel/processor/activity/package-summary.html">org.apache.taverna.workflowmodel.processor.activity</a></dt>
<dd>
<div class="block">Used when dragging activities from the palette onto "something".</div>
@@ -465,7 +461,7 @@
<dd> </dd>
<dt><a href="org/apache/taverna/platform/report/ActivityReport.html" title="class in org.apache.taverna.platform.report"><span class="typeNameLink">ActivityReport</span></a> - Class in <a href="org/apache/taverna/platform/report/package-summary.html">org.apache.taverna.platform.report</a></dt>
<dd>
-<div class="block">Report about the <a href="org/apache/taverna/platform/report/State.html" title="enum in org.apache.taverna.platform.report"><code>State</code></a> of an <code>Activity</code> invocation.</div>
+<div class="block">Report about the <a href="org/apache/taverna/platform/report/State.html" title="enum in org.apache.taverna.platform.report"><code>State</code></a> of an <a href="https://taverna.incubator.apache.org/javadoc/taverna-language/org/apache/taverna/scufl2/api/activity/Activity.html?is-external=true" title="class or interface in org.apache.taverna.scufl2.api.activity"><code>Activity</code></a> invocation.</div>
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/report/ActivityReport.html#ActivityReport-org.apache.taverna.scufl2.api.activity.Activity-">ActivityReport(Activity)</a></span> - Constructor for class org.apache.taverna.platform.report.<a href="org/apache/taverna/platform/report/ActivityReport.html" title="class in org.apache.taverna.platform.report">ActivityReport</a></dt>
<dd>
@@ -562,8 +558,6 @@
<div class="block">Insert a new key entry containing private key and the corresponding
public key certificate chain in the Keystore.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#addKeyPair-org.apache.jena.ontology.Individual-long-org.apache.jena.ontology.Individual-">addKeyPair(Individual, long, Individual)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.html#addLayer-org.apache.taverna.workflowmodel.processor.dispatch.DispatchLayer-">addLayer(DispatchLayer<?>)</a></span> - Method in class org.apache.taverna.workflowmodel.processor.dispatch.impl.<a href="org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.impl">DispatchStackImpl</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.html#addLayer-org.apache.taverna.workflowmodel.processor.dispatch.DispatchLayer-int-">addLayer(DispatchLayer<?>, int)</a></span> - Method in class org.apache.taverna.workflowmodel.processor.dispatch.impl.<a href="org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.impl">DispatchStackImpl</a></dt>
@@ -672,8 +666,6 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.html#addStrategy-org.apache.taverna.workflowmodel.processor.iteration.IterationStrategy-">addStrategy(IterationStrategy)</a></span> - Method in class org.apache.taverna.workflowmodel.processor.iteration.impl.<a href="org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.html" title="class in org.apache.taverna.workflowmodel.processor.iteration.impl">IterationStrategyStackImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#addSubProcess-org.apache.jena.ontology.Individual-org.apache.jena.ontology.Individual-">addSubProcess(Individual, Individual)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/utility/TypedTreeModel.html#addTreeModelListener-org.apache.taverna.utility.TypedTreeModelListener-">addTreeModelListener(TypedTreeModelListener<NodeType>)</a></span> - Method in interface org.apache.taverna.utility.<a href="org/apache/taverna/utility/TypedTreeModel.html" title="interface in org.apache.taverna.utility">TypedTreeModel</a></dt>
<dd>
<div class="block">Adds a listener for the TreeModelEvent posted after the tree changes.</div>
@@ -704,8 +696,6 @@
<div class="block">Insert a username and password pair for the given service URI in the
Keystore.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#agent">agent</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/activity/ActivityInputPort.html#allowsLiteralValues--">allowsLiteralValues()</a></span> - Method in interface org.apache.taverna.workflowmodel.processor.activity.<a href="org/apache/taverna/workflowmodel/processor/activity/ActivityInputPort.html" title="interface in org.apache.taverna.workflowmodel.processor.activity">ActivityInputPort</a></dt>
<dd>
<div class="block">Literal values are a special case as they are not represented by
@@ -784,10 +774,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/impl/AbstractProcessorEdit.html#applyEdit--">applyEdit()</a></span> - Method in class org.apache.taverna.workflowmodel.impl.<a href="org/apache/taverna/workflowmodel/impl/AbstractProcessorEdit.html" title="class in org.apache.taverna.workflowmodel.impl">AbstractProcessorEdit</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#Artifact">Artifact</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#Association">Association</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/workflowmodel/processor/activity/AsynchronousActivity.html" title="interface in org.apache.taverna.workflowmodel.processor.activity"><span class="typeNameLink">AsynchronousActivity</span></a><<a href="org/apache/taverna/workflowmodel/processor/activity/AsynchronousActivity.html" title="type parameter in AsynchronousActivity">ConfigurationType</a>> - Interface in <a href="org/apache/taverna/workflowmodel/processor/activity/package-summary.html">org.apache.taverna.workflowmodel.processor.activity</a></dt>
<dd>
<div class="block">A concrete invokable activity with an asynchronous invocation API and no
@@ -798,8 +784,6 @@
<div class="block">The callback interface used by instances of AsynchronousActivity to push
results and failure messages back to the invocation layer.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#atTime">atTime</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/reference/ReferenceSetAugmentorCallback.html#augmentationCompleted-java.util.Set-">augmentationCompleted(Set<ExternalReferenceSPI>)</a></span> - Method in interface org.apache.taverna.reference.<a href="org/apache/taverna/reference/ReferenceSetAugmentorCallback.html" title="interface in org.apache.taverna.reference">ReferenceSetAugmentorCallback</a></dt>
<dd>
<div class="block">Called when the augmentation has succeeded</div>
@@ -866,18 +850,12 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.html#buildersUpdated-java.lang.Object-java.util.Map-">buildersUpdated(Object, Map<?, ?>)</a></span> - Method in class org.apache.taverna.reference.impl.<a href="org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.html" title="class in org.apache.taverna.reference.impl">ReferenceSetAugmentorImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#Bundle">Bundle</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/reference/impl/external/object/ByteArrayToByteArrayReference.html" title="class in org.apache.taverna.reference.impl.external.object"><span class="typeNameLink">ByteArrayToByteArrayReference</span></a> - Class in <a href="org/apache/taverna/reference/impl/external/object/package-summary.html">org.apache.taverna.reference.impl.external.object</a></dt>
<dd>
<div class="block">Convert a byte[] to a ByteArrayReference</div>
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/reference/impl/external/object/ByteArrayToByteArrayReference.html#ByteArrayToByteArrayReference--">ByteArrayToByteArrayReference()</a></span> - Constructor for class org.apache.taverna.reference.impl.external.object.<a href="org/apache/taverna/reference/impl/external/object/ByteArrayToByteArrayReference.html" title="class in org.apache.taverna.reference.impl.external.object">ByteArrayToByteArrayReference</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#byteCount">byteCount</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#bytes">bytes</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
</dl>
<a name="I:C">
<!-- -->
@@ -986,16 +964,12 @@
<div class="block">Change the Keystore and the Truststore's master password to the one
provided.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#characterEncoding">characterEncoding</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/reference/impl/external/object/CharacterToStringReference.html" title="class in org.apache.taverna.reference.impl.external.object"><span class="typeNameLink">CharacterToStringReference</span></a> - Class in <a href="org/apache/taverna/reference/impl/external/object/package-summary.html">org.apache.taverna.reference.impl.external.object</a></dt>
<dd>
<div class="block">Convert a <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Character.html?is-external=true" title="class or interface in java.lang"><code>Character</code></a> to a StringReference.</div>
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/reference/impl/external/object/CharacterToStringReference.html#CharacterToStringReference--">CharacterToStringReference()</a></span> - Constructor for class org.apache.taverna.reference.impl.external.object.<a href="org/apache/taverna/reference/impl/external/object/CharacterToStringReference.html" title="class in org.apache.taverna.reference.impl.external.object">CharacterToStringReference</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#chars">chars</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.html#checkAugmentor--">checkAugmentor()</a></span> - Method in class org.apache.taverna.reference.impl.<a href="org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.html" title="class in org.apache.taverna.reference.impl">AbstractReferenceSetServiceImpl</a></dt>
<dd>
<div class="block">Check that the reference set augmentor is configured</div>
@@ -1029,8 +1003,6 @@
<dd>
<div class="block">Check that the t2reference generator is configured</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#checkNotNull-org.apache.jena.ontology.OntModel-java.lang.Object...-">checkNotNull(OntModel, Object...)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.html#checkServices--">checkServices()</a></span> - Method in class org.apache.taverna.reference.impl.<a href="org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.html" title="class in org.apache.taverna.reference.impl">AbstractReferenceServiceImpl</a></dt>
<dd>
<div class="block">Throw a ReferenceServiceException if methods in ReferenceService are
@@ -1173,14 +1145,6 @@
<dd>
<div class="block">Creates a new CMNotInitialisedException with the specified message.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#CNT">CNT</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#cnt">cnt</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#Collection">Collection</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#Communication">Communication</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/security/credentialmanager/MasterPasswordProvider.ProviderComparator.html#compare-org.apache.taverna.security.credentialmanager.MasterPasswordProvider-org.apache.taverna.security.credentialmanager.MasterPasswordProvider-">compare(MasterPasswordProvider, MasterPasswordProvider)</a></span> - Method in class org.apache.taverna.security.credentialmanager.<a href="org/apache/taverna/security/credentialmanager/MasterPasswordProvider.ProviderComparator.html" title="class in org.apache.taverna.security.credentialmanager">MasterPasswordProvider.ProviderComparator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/utils/NamedWorkflowEntityComparator.html#compare-org.apache.taverna.workflowmodel.NamedWorkflowEntity-org.apache.taverna.workflowmodel.NamedWorkflowEntity-">compare(NamedWorkflowEntity, NamedWorkflowEntity)</a></span> - Method in class org.apache.taverna.workflowmodel.utils.<a href="org/apache/taverna/workflowmodel/utils/NamedWorkflowEntityComparator.html" title="class in org.apache.taverna.workflowmodel.utils">NamedWorkflowEntityComparator</a></dt>
@@ -1264,8 +1228,8 @@
<dd> </dd>
<dt><a href="org/apache/taverna/platform/capability/api/ConfigurationException.html" title="class in org.apache.taverna.platform.capability.api"><span class="typeNameLink">ConfigurationException</span></a> - Exception in <a href="org/apache/taverna/platform/capability/api/package-summary.html">org.apache.taverna.platform.capability.api</a></dt>
<dd>
-<div class="block">Thrown when a <code>Configurable</code> cannot be configured by a
- <code>Configuration</code>.</div>
+<div class="block">Thrown when a <a href="https://taverna.incubator.apache.org/javadoc/taverna-language/org/apache/taverna/scufl2/api/common/Configurable.html?is-external=true" title="class or interface in org.apache.taverna.scufl2.api.common"><code>Configurable</code></a> cannot be configured by a
+ <a href="https://taverna.incubator.apache.org/javadoc/taverna-language/org/apache/taverna/scufl2/api/configurations/Configuration.html?is-external=true" title="class or interface in org.apache.taverna.scufl2.api.configurations"><code>Configuration</code></a>.</div>
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/capability/api/ConfigurationException.html#ConfigurationException--">ConfigurationException()</a></span> - Constructor for exception org.apache.taverna.platform.capability.api.<a href="org/apache/taverna/platform/capability/api/ConfigurationException.html" title="class in org.apache.taverna.platform.capability.api">ConfigurationException</a></dt>
<dd> </dd>
@@ -1391,14 +1355,6 @@
<dd>
<div class="block">Returns true if processor contains a nested workflow.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#content">content</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#Content">Content</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#ContentAsBase64">ContentAsBase64</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#ContentAsText">ContentAsText</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/invocation/TreeCache.NamedNode.html#contents">contents</a></span> - Variable in class org.apache.taverna.invocation.<a href="org/apache/taverna/invocation/TreeCache.NamedNode.html" title="class in org.apache.taverna.invocation">TreeCache.NamedNode</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/invocation/Event.html#context">context</a></span> - Variable in class org.apache.taverna.invocation.<a href="org/apache/taverna/invocation/Event.html" title="class in org.apache.taverna.invocation">Event</a></dt>
@@ -1487,8 +1443,6 @@
<dd>
<div class="block">Creates a new <code>Activity</code> instance.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#createActivity-java.net.URI-">createActivity(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/Edits.html#createActivityInputPort-java.lang.String-int-boolean-java.util.List-java.lang.Class-">createActivityInputPort(String, int, boolean, List<Class<? extends ExternalReferenceSPI>>, Class<?>)</a></span> - Method in interface org.apache.taverna.workflowmodel.<a href="org/apache/taverna/workflowmodel/Edits.html" title="interface in org.apache.taverna.workflowmodel">Edits</a></dt>
<dd>
<div class="block">Builds an instance of an <a href="org/apache/taverna/workflowmodel/InputPort.html" title="interface in org.apache.taverna.workflowmodel"><code>InputPort</code></a> for an Activity.</div>
@@ -1517,10 +1471,6 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/impl/EditsImpl.html#createAnnotationChain--">createAnnotationChain()</a></span> - Method in class org.apache.taverna.workflowmodel.impl.<a href="org/apache/taverna/workflowmodel/impl/EditsImpl.html" title="class in org.apache.taverna.workflowmodel.impl">EditsImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#createArtifact-java.net.URI-">createArtifact(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#createBundle-java.net.URI-">createBundle(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.html#createDataflow-org.apache.taverna.scufl2.api.core.Workflow-">createDataflow(Workflow)</a></span> - Method in class org.apache.taverna.platform.execution.impl.local.<a href="org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.html" title="class in org.apache.taverna.platform.execution.impl.local">WorkflowToDataflowMapper</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/Edits.html#createDataflow--">createDataflow()</a></span> - Method in interface org.apache.taverna.workflowmodel.<a href="org/apache/taverna/workflowmodel/Edits.html" title="interface in org.apache.taverna.workflowmodel">Edits</a></dt>
@@ -1547,8 +1497,6 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/impl/EditsImpl.html#createDatalink-org.apache.taverna.workflowmodel.EventForwardingOutputPort-org.apache.taverna.workflowmodel.EventHandlingInputPort-">createDatalink(EventForwardingOutputPort, EventHandlingInputPort)</a></span> - Method in class org.apache.taverna.workflowmodel.impl.<a href="org/apache/taverna/workflowmodel/impl/EditsImpl.html" title="class in org.apache.taverna.workflowmodel.impl">EditsImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#createDictionary-java.net.URI-">createDictionary(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/capability/api/DispatchLayerService.html#createDispatchLayer-java.net.URI-com.fasterxml.jackson.databind.JsonNode-">createDispatchLayer(URI, JsonNode)</a></span> - Method in interface org.apache.taverna.platform.capability.api.<a href="org/apache/taverna/platform/capability/api/DispatchLayerService.html" title="interface in org.apache.taverna.platform.capability.api">DispatchLayerService</a></dt>
<dd>
<div class="block">Returns the dispatch layer for the specified URI.</div>
@@ -1561,10 +1509,6 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/CoreDispatchLayerFactory.html#createDispatchLayer-java.net.URI-">createDispatchLayer(URI)</a></span> - Method in class org.apache.taverna.workflowmodel.processor.dispatch.layers.<a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/CoreDispatchLayerFactory.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.layers">CoreDispatchLayerFactory</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#createEntity-java.net.URI-">createEntity(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#createError-java.net.URI-">createError(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/execution/api/AbstractExecutionService.html#createExecution-org.apache.taverna.platform.execution.api.ExecutionEnvironment-org.apache.taverna.scufl2.api.container.WorkflowBundle-org.apache.taverna.scufl2.api.core.Workflow-org.apache.taverna.scufl2.api.profiles.Profile-org.apache.taverna.robundle.Bundle-">createExecution(ExecutionEnvironment, WorkflowBundle, Workflow, Profile, Bundle)</a></span> - Method in class org.apache.taverna.platform.execution.api.<a href="org/apache/taverna/platform/execution/api/AbstractExecutionService.html" title="class in org.apache.taverna.platform.execution.api">AbstractExecutionService</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/execution/api/ExecutionService.html#createExecution-org.apache.taverna.platform.execution.api.ExecutionEnvironment-org.apache.taverna.scufl2.api.container.WorkflowBundle-org.apache.taverna.scufl2.api.core.Workflow-org.apache.taverna.scufl2.api.profiles.Profile-org.apache.taverna.robundle.Bundle-">createExecution(ExecutionEnvironment, WorkflowBundle, Workflow, Profile, Bundle)</a></span> - Method in interface org.apache.taverna.platform.execution.api.<a href="org/apache/taverna/platform/execution/api/ExecutionService.html" title="interface in org.apache.taverna.platform.execution.api">ExecutionService</a></dt>
@@ -1579,8 +1523,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/execution/impl/remote/RemoteExecutionService.html#createExecutionImpl-org.apache.taverna.scufl2.api.container.WorkflowBundle-org.apache.taverna.scufl2.api.core.Workflow-org.apache.taverna.scufl2.api.profiles.Profile-org.apache.taverna.robundle.Bundle-">createExecutionImpl(WorkflowBundle, Workflow, Profile, Bundle)</a></span> - Method in class org.apache.taverna.platform.execution.impl.remote.<a href="org/apache/taverna/platform/execution/impl/remote/RemoteExecutionService.html" title="class in org.apache.taverna.platform.execution.impl.remote">RemoteExecutionService</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#createInputParameter-java.net.URI-">createInputParameter(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/impl/DataflowImpl.html#createInputPort-java.lang.String-int-int-">createInputPort(String, int, int)</a></span> - Method in class org.apache.taverna.workflowmodel.impl.<a href="org/apache/taverna/workflowmodel/impl/DataflowImpl.html" title="class in org.apache.taverna.workflowmodel.impl">DataflowImpl</a></dt>
<dd>
<div class="block">Build a new dataflow input port, the granular depth is set for the input
@@ -1614,16 +1556,10 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/impl/EditsImpl.html#createMergeInputPort-org.apache.taverna.workflowmodel.Merge-java.lang.String-int-">createMergeInputPort(Merge, String, int)</a></span> - Method in class org.apache.taverna.workflowmodel.impl.<a href="org/apache/taverna/workflowmodel/impl/EditsImpl.html" title="class in org.apache.taverna.workflowmodel.impl">EditsImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#createOutputParameter-java.net.URI-">createOutputParameter(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/impl/DataflowImpl.html#createOutputPort-java.lang.String-">createOutputPort(String)</a></span> - Method in class org.apache.taverna.workflowmodel.impl.<a href="org/apache/taverna/workflowmodel/impl/DataflowImpl.html" title="class in org.apache.taverna.workflowmodel.impl">DataflowImpl</a></dt>
<dd>
<div class="block">Create and return a new DataflowOutputPort in this dataflow</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#createPlan-java.net.URI-">createPlan(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#createProcess-java.net.URI-">createProcess(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/Edits.html#createProcessor-java.lang.String-">createProcessor(String)</a></span> - Method in interface org.apache.taverna.workflowmodel.<a href="org/apache/taverna/workflowmodel/Edits.html" title="interface in org.apache.taverna.workflowmodel">Edits</a></dt>
<dd>
<div class="block">Builds a new instance of a Processor with the given name.</div>
@@ -1648,8 +1584,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/execution/impl/remote/RemoteExecution.html#createProcessorReport-org.apache.taverna.scufl2.api.core.Processor-">createProcessorReport(Processor)</a></span> - Method in class org.apache.taverna.platform.execution.impl.remote.<a href="org/apache/taverna/platform/execution/impl/remote/RemoteExecution.html" title="class in org.apache.taverna.platform.execution.impl.remote">RemoteExecution</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#createProcessRun-java.net.URI-">createProcessRun(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputFormat.html#createRecordReader-org.apache.hadoop.mapreduce.InputSplit-org.apache.hadoop.mapreduce.TaskAttemptContext-">createRecordReader(InputSplit, TaskAttemptContext)</a></span> - Method in class org.apache.taverna.platform.execution.impl.hadoop.<a href="org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputFormat.html" title="class in org.apache.taverna.platform.execution.impl.hadoop">CrossProductInputFormat</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/execution/impl/hadoop/TavernaInputFormat.html#createRecordReader-org.apache.hadoop.mapreduce.InputSplit-org.apache.hadoop.mapreduce.TaskAttemptContext-">createRecordReader(InputSplit, TaskAttemptContext)</a></span> - Method in class org.apache.taverna.platform.execution.impl.hadoop.<a href="org/apache/taverna/platform/execution/impl/hadoop/TavernaInputFormat.html" title="class in org.apache.taverna.platform.execution.impl.hadoop">TavernaInputFormat</a></dt>
@@ -1680,16 +1614,12 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/t2referencetest/GreenToRed.html#createReference-org.apache.taverna.t2referencetest.GreenReference-org.apache.taverna.reference.ReferenceContext-">createReference(GreenReference, ReferenceContext)</a></span> - Method in class org.apache.taverna.t2referencetest.<a href="org/apache/taverna/t2referencetest/GreenToRed.html" title="class in org.apache.taverna.t2referencetest">GreenToRed</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#createRole-java.net.URI-">createRole(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/run/api/RunService.html#createRun-org.apache.taverna.platform.run.api.RunProfile-">createRun(RunProfile)</a></span> - Method in interface org.apache.taverna.platform.run.api.<a href="org/apache/taverna/platform/run/api/RunService.html" title="interface in org.apache.taverna.platform.run.api">RunService</a></dt>
<dd>
<div class="block">Creates a new run and returns the ID for the run.</div>
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/run/impl/RunServiceImpl.html#createRun-org.apache.taverna.platform.run.api.RunProfile-">createRun(RunProfile)</a></span> - Method in class org.apache.taverna.platform.run.impl.<a href="org/apache/taverna/platform/run/impl/RunServiceImpl.html" title="class in org.apache.taverna.platform.run.impl">RunServiceImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#createTavernaEngine-java.net.URI-">createTavernaEngine(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/security/credentialmanager/CredentialManager.html#createTrustedCertificateAlias-java.security.cert.X509Certificate-">createTrustedCertificateAlias(X509Certificate)</a></span> - Method in interface org.apache.taverna.security.credentialmanager.<a href="org/apache/taverna/security/credentialmanager/CredentialManager.html" title="interface in org.apache.taverna.security.credentialmanager">CredentialManager</a></dt>
<dd>
<div class="block">Create a Truststore alias that would be used for adding the given trusted
@@ -1700,8 +1630,6 @@
<div class="block">Create a Truststore alias that would be used for adding the given trusted
X509 certificate to the Truststore.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#createWorkflow-java.net.URI-">createWorkflow(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/Edits.html#createWorkflowInstanceFacade-org.apache.taverna.workflowmodel.Dataflow-org.apache.taverna.invocation.InvocationContext-java.lang.String-">createWorkflowInstanceFacade(Dataflow, InvocationContext, String)</a></span> - Method in interface org.apache.taverna.workflowmodel.<a href="org/apache/taverna/workflowmodel/Edits.html" title="interface in org.apache.taverna.workflowmodel">Edits</a></dt>
<dd>
<div class="block">Build a new WorkflowInstanceFacade using the supplied Dataflow</div>
@@ -1714,8 +1642,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/execution/impl/remote/RemoteExecution.html#createWorkflowReport-org.apache.taverna.scufl2.api.core.Workflow-">createWorkflowReport(Workflow)</a></span> - Method in class org.apache.taverna.platform.execution.impl.remote.<a href="org/apache/taverna/platform/execution/impl/remote/RemoteExecution.html" title="class in org.apache.taverna.platform.execution.impl.remote">RemoteExecution</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#createWorkflowRun-java.net.URI-">createWorkflowRun(URI)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/security/credentialmanager/CredentialManager.html" title="interface in org.apache.taverna.security.credentialmanager"><span class="typeNameLink">CredentialManager</span></a> - Interface in <a href="org/apache/taverna/security/credentialmanager/package-summary.html">org.apache.taverna.security.credentialmanager</a></dt>
<dd>
<div class="block">Provides a wrapper for Taverna's Keystore and Truststore and implements
@@ -1930,10 +1856,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/health/HealthCheck.html#DATATYPE_SOURCE">DATATYPE_SOURCE</a></span> - Static variable in class org.apache.taverna.workflowmodel.health.<a href="org/apache/taverna/workflowmodel/health/HealthCheck.html" title="class in org.apache.taverna.workflowmodel.health">HealthCheck</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#dcterms">dcterms</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#DEFAULT_ONT_MODEL_SPEC">DEFAULT_ONT_MODEL_SPEC</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/health/HealthCheck.html#DEFAULT_VALUE">DEFAULT_VALUE</a></span> - Static variable in class org.apache.taverna.workflowmodel.health.<a href="org/apache/taverna/workflowmodel/health/HealthCheck.html" title="class in org.apache.taverna.workflowmodel.health">HealthCheck</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.html#defaultConfig--">defaultConfig()</a></span> - Static method in class org.apache.taverna.workflowmodel.processor.dispatch.layers.<a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.layers">Retry</a></dt>
@@ -2134,12 +2056,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/monitor/MonitorManager.DeregisterNodeMessage.html#DeregisterNodeMessage-java.lang.String:A-">DeregisterNodeMessage(String[])</a></span> - Constructor for class org.apache.taverna.monitor.<a href="org/apache/taverna/monitor/MonitorManager.DeregisterNodeMessage.html" title="class in org.apache.taverna.monitor">MonitorManager.DeregisterNodeMessage</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#describedByParameter">describedByParameter</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#describedByProcess">describedByProcess</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#describedByWorkflow">describedByWorkflow</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/annotation/annotationbeans/DescriptiveTitle.html" title="class in org.apache.taverna.annotation.annotationbeans"><span class="typeNameLink">DescriptiveTitle</span></a> - Class in <a href="org/apache/taverna/annotation/annotationbeans/package-summary.html">org.apache.taverna.annotation.annotationbeans</a></dt>
<dd>
<div class="block">The descriptive title of a dataflow held as a String</div>
@@ -2156,8 +2072,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.html#DeserializeParam-java.lang.String-">DeserializeParam(String)</a></span> - Static method in class org.apache.taverna.workflowmodel.processor.dispatch.layers.<a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.layers">IntermediateProvenance</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#Dictionary">Dictionary</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/configuration/database/DatabaseConfiguration.html#disableAutoSave--">disableAutoSave()</a></span> - Method in interface org.apache.taverna.configuration.database.<a href="org/apache/taverna/configuration/database/DatabaseConfiguration.html" title="interface in org.apache.taverna.configuration.database">DatabaseConfiguration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.html#disableAutoSave--">disableAutoSave()</a></span> - Method in class org.apache.taverna.configuration.database.impl.<a href="org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.html" title="class in org.apache.taverna.configuration.database.impl">DatabaseConfigurationImpl</a></dt>
@@ -2491,10 +2405,6 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/impl/EditsImpl.html#EditsImpl--">EditsImpl()</a></span> - Constructor for class org.apache.taverna.workflowmodel.impl.<a href="org/apache/taverna/workflowmodel/impl/EditsImpl.html" title="class in org.apache.taverna.workflowmodel.impl">EditsImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#EmptyCollection">EmptyCollection</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#EmptyDictionary">EmptyDictionary</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/reference/impl/EmptyReferenceContext.html" title="class in org.apache.taverna.reference.impl"><span class="typeNameLink">EmptyReferenceContext</span></a> - Class in <a href="org/apache/taverna/reference/impl/package-summary.html">org.apache.taverna.reference.impl</a></dt>
<dd>
<div class="block">A trivial implementation of ReferenceContext, used if the context parameter
@@ -2508,16 +2418,8 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.html#enableAutoSave--">enableAutoSave()</a></span> - Method in class org.apache.taverna.configuration.database.impl.<a href="org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.html" title="class in org.apache.taverna.configuration.database.impl">DatabaseConfigurationImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#End">End</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#endedAtTime">endedAtTime</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/health/RemoteHealthChecker.html#ENDPOINT_EXPIRY_MILLIS">ENDPOINT_EXPIRY_MILLIS</a></span> - Static variable in class org.apache.taverna.workflowmodel.health.<a href="org/apache/taverna/workflowmodel/health/RemoteHealthChecker.html" title="class in org.apache.taverna.workflowmodel.health">RemoteHealthChecker</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#Entity">Entity</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#entity">entity</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/provenance/item/AbstractProvenanceItem.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class org.apache.taverna.provenance.item.<a href="org/apache/taverna/provenance/item/AbstractProvenanceItem.html" title="class in org.apache.taverna.provenance.item">AbstractProvenanceItem</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/reference/impl/external/file/FileReference.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class org.apache.taverna.reference.impl.external.file.<a href="org/apache/taverna/reference/impl/external/file/FileReference.html" title="class in org.apache.taverna.reference.impl.external.file">FileReference</a></dt>
@@ -2532,8 +2434,6 @@
b, c and d are all the same type and the condition (a.equals(c) &
b.equals(d)) is true.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#Error">Error</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.layers"><span class="typeNameLink">ErrorBounce</span></a> - Class in <a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/package-summary.html">org.apache.taverna.workflowmodel.processor.dispatch.layers</a></dt>
<dd>
<div class="block">Receives job events, checks to see whether any parameters in the job are
@@ -2594,8 +2494,6 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/reference/impl/ErrorDocumentServiceImpl.html#ErrorDocumentServiceImpl--">ErrorDocumentServiceImpl()</a></span> - Constructor for class org.apache.taverna.reference.impl.<a href="org/apache/taverna/reference/impl/ErrorDocumentServiceImpl.html" title="class in org.apache.taverna.reference.impl">ErrorDocumentServiceImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#errorMessage">errorMessage</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/provenance/item/ErrorProvenanceItem.html" title="class in org.apache.taverna.provenance.item"><span class="typeNameLink">ErrorProvenanceItem</span></a> - Class in <a href="org/apache/taverna/provenance/item/package-summary.html">org.apache.taverna.provenance.item</a></dt>
<dd>
<div class="block">When an error is received in the dispatch stack, one of these is created and
@@ -2914,10 +2812,6 @@
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.html#firstLayer--">firstLayer()</a></span> - Method in class org.apache.taverna.workflowmodel.processor.dispatch.impl.<a href="org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.impl">DispatchStackImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#FOAF_0_1">FOAF_0_1</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#FOAF_RDF">FOAF_RDF</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.html#forget-java.lang.String-int:A-">forget(String, int[])</a></span> - Method in class org.apache.taverna.workflowmodel.processor.dispatch.<a href="org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch">AbstractErrorHandlerLayer</a></dt>
<dd>
<div class="block">Remove the specified pending retry job from the cache</div>
@@ -2938,8 +2832,6 @@
<dl>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/execution/api/AbstractExecution.html#generateWorkflowReport-org.apache.taverna.scufl2.api.core.Workflow-">generateWorkflowReport(Workflow)</a></span> - Method in class org.apache.taverna.platform.execution.api.<a href="org/apache/taverna/platform/execution/api/AbstractExecution.html" title="class in org.apache.taverna.platform.execution.api">AbstractExecution</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#Generation">Generation</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/invocation/TreeCache.html#get-int:A-">get(int[])</a></span> - Method in class org.apache.taverna.invocation.<a href="org/apache/taverna/invocation/TreeCache.html" title="class in org.apache.taverna.invocation">TreeCache</a></dt>
<dd>
<div class="block">Get the job object at the specified index array</div>
@@ -4792,8 +4684,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortDefinitionBean.html#getMimeTypes--">getMimeTypes()</a></span> - Method in class org.apache.taverna.workflowmodel.processor.activity.config.<a href="org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortDefinitionBean.html" title="class in org.apache.taverna.workflowmodel.processor.activity.config">ActivityPortDefinitionBean</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#getModel--">getModel()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/monitor/impl/MonitorTreeModel.html#getMonitorTree--">getMonitorTree()</a></span> - Method in class org.apache.taverna.monitor.impl.<a href="org/apache/taverna/monitor/impl/MonitorTreeModel.html" title="class in org.apache.taverna.monitor.impl">MonitorTreeModel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/utils/Tools.html#getMoveDatalinkSinkEdit-org.apache.taverna.workflowmodel.Dataflow-org.apache.taverna.workflowmodel.Datalink-org.apache.taverna.workflowmodel.EventHandlingInputPort-org.apache.taverna.workflowmodel.Edits-">getMoveDatalinkSinkEdit(Dataflow, Datalink, EventHandlingInputPort, Edits)</a></span> - Static method in class org.apache.taverna.workflowmodel.utils.<a href="org/apache/taverna/workflowmodel/utils/Tools.html" title="class in org.apache.taverna.workflowmodel.utils">Tools</a></dt>
@@ -6005,14 +5895,6 @@
</a>
<h2 class="title">H</h2>
<dl>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#hadDictionaryMember">hadDictionaryMember</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#hadMember">hadMember</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#hadPlan">hadPlan</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#hadRole">hadRole</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.JobState.html#handleError--">handleError()</a></span> - Method in class org.apache.taverna.workflowmodel.processor.dispatch.<a href="org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.JobState.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch">AbstractErrorHandlerLayer.JobState</a></dt>
<dd>
<div class="block">Called when the layer below pushes an error up and where the error
@@ -6051,10 +5933,6 @@
<div class="block">Checks if the Keystore contains the given key pair entry (private key and
its corresponding public key certificate chain).</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#hasPart">hasPart</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#hasSubProcess">hasSubProcess</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/security/credentialmanager/CredentialManager.html#hasTrustedCertificate-java.security.cert.Certificate-">hasTrustedCertificate(Certificate)</a></span> - Method in interface org.apache.taverna.security.credentialmanager.<a href="org/apache/taverna/security/credentialmanager/CredentialManager.html" title="interface in org.apache.taverna.security.credentialmanager">CredentialManager</a></dt>
<dd>
<div class="block">Checks if the Truststore contains the given public key certificate.</div>
@@ -6298,8 +6176,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/iteration/PrefixDotProduct.html#innerReceiveJob-int-org.apache.taverna.workflowmodel.processor.activity.Job-">innerReceiveJob(int, Job)</a></span> - Method in class org.apache.taverna.workflowmodel.processor.iteration.<a href="org/apache/taverna/workflowmodel/processor/iteration/PrefixDotProduct.html" title="class in org.apache.taverna.workflowmodel.processor.iteration">PrefixDotProduct</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#Input">Input</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/iteration/CompletionHandlingAbstractIterationStrategyNode.CompletionState.html#inputComplete">inputComplete</a></span> - Variable in class org.apache.taverna.workflowmodel.processor.iteration.<a href="org/apache/taverna/workflowmodel/processor/iteration/CompletionHandlingAbstractIterationStrategyNode.CompletionState.html" title="class in org.apache.taverna.workflowmodel.processor.iteration">CompletionHandlingAbstractIterationStrategyNode.CompletionState</a></dt>
<dd> </dd>
<dt><a href="org/apache/taverna/provenance/item/InputDataProvenanceItem.html" title="class in org.apache.taverna.provenance.item"><span class="typeNameLink">InputDataProvenanceItem</span></a> - Class in <a href="org/apache/taverna/provenance/item/package-summary.html">org.apache.taverna.provenance.item</a></dt>
@@ -6743,8 +6619,6 @@
</a>
<h2 class="title">K</h2>
<dl>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#KeyEntityPair">KeyEntityPair</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/security/credentialmanager/CredentialManager.html#KEYSTORE_FILE_NAME">KEYSTORE_FILE_NAME</a></span> - Static variable in interface org.apache.taverna.security.credentialmanager.<a href="org/apache/taverna/security/credentialmanager/CredentialManager.html" title="interface in org.apache.taverna.security.credentialmanager">CredentialManager</a></dt>
<dd> </dd>
<dt><a href="org/apache/taverna/security/credentialmanager/KeystoreChangedEvent.html" title="class in org.apache.taverna.security.credentialmanager"><span class="typeNameLink">KeystoreChangedEvent</span></a> - Class in <a href="org/apache/taverna/security/credentialmanager/package-summary.html">org.apache.taverna.security.credentialmanager</a></dt>
@@ -6856,16 +6730,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/run/impl/WorkflowReportJSON.html#load-java.nio.file.Path-org.apache.taverna.scufl2.api.container.WorkflowBundle-">load(Path, WorkflowBundle)</a></span> - Method in class org.apache.taverna.platform.run.impl.<a href="org/apache/taverna/platform/run/impl/WorkflowReportJSON.html" title="class in org.apache.taverna.platform.run.impl">WorkflowReportJSON</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#loadDcTerms--">loadDcTerms()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#loadOntologies--">loadOntologies()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#loadOntologies--">loadOntologies()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#loadOntologies--">loadOntologies()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#loadOntologyFromClasspath-java.lang.String-java.lang.String-">loadOntologyFromClasspath(String, String)</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/security/credentialmanager/CredentialManager.html#loadPKCS12Keystore-java.nio.file.Path-java.lang.String-">loadPKCS12Keystore(Path, String)</a></span> - Method in interface org.apache.taverna.security.credentialmanager.<a href="org/apache/taverna/security/credentialmanager/CredentialManager.html" title="interface in org.apache.taverna.security.credentialmanager">CredentialManager</a></dt>
<dd>
<div class="block">Load a PKCS12-type keystore from a file using the supplied password.</div>
@@ -6874,16 +6738,6 @@
<dd>
<div class="block">Load a PKCS12-type keystore from a file using the supplied password.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#loadProvDictionary--">loadProvDictionary()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#loadPROVO--">loadPROVO()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html#loadTavernaProv--">loadTavernaProv()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/TavernaProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">TavernaProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#loadWfDesc--">loadWfDesc()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#loadWfprov--">loadWfprov()</a></span> - Method in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/run/impl/WorkflowReportJSON.html#loadWorkflowReportJson-java.nio.file.Path-">loadWorkflowReportJson(Path)</a></span> - Method in class org.apache.taverna.platform.run.impl.<a href="org/apache/taverna/platform/run/impl/WorkflowReportJSON.html" title="class in org.apache.taverna.platform.run.impl">WorkflowReportJSON</a></dt>
<dd> </dd>
<dt><a href="org/apache/taverna/platform/execution/impl/local/LocalExecution.html" title="class in org.apache.taverna.platform.execution.impl.local"><span class="typeNameLink">LocalExecution</span></a> - Class in <a href="org/apache/taverna/platform/execution/impl/local/package-summary.html">org.apache.taverna.platform.execution.impl.local</a></dt>
@@ -7032,8 +6886,6 @@
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/iteration/MissingIterationInputException.html#MissingIterationInputException-java.lang.String-java.lang.Throwable-">MissingIterationInputException(String, Throwable)</a></span> - Constructor for exception org.apache.taverna.workflowmodel.processor.iteration.<a href="org/apache/taverna/workflowmodel/processor/iteration/MissingIterationInputException.html" title="class in org.apache.taverna.workflowmodel.processor.iteration">MissingIterationInputException</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#model">model</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/workflowmodel/processor/activity/MonitorableAsynchronousActivity.html" title="interface in org.apache.taverna.workflowmodel.processor.activity"><span class="typeNameLink">MonitorableAsynchronousActivity</span></a><<a href="org/apache/taverna/workflowmodel/processor/activity/MonitorableAsynchronousActivity.html" title="type parameter in MonitorableAsynchronousActivity">ConfigType</a>> - Interface in <a href="org/apache/taverna/workflowmodel/processor/activity/package-summary.html">org.apache.taverna.workflowmodel.processor.activity</a></dt>
<dd>
<div class="block">An extension of AsynchronousActivity with the additional stipulation that
@@ -7346,8 +7198,6 @@
<dd>
<div class="block">Build a new ordered pair with the specified objects.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#ORE">ORE</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/activities/dataflow/package-summary.html">org.apache.taverna.activities.dataflow</a> - package org.apache.taverna.activities.dataflow</dt>
<dd> </dd>
<dt><a href="org/apache/taverna/activities/stringconstant/package-summary.html">org.apache.taverna.activities.stringconstant</a> - package org.apache.taverna.activities.stringconstant</dt>
@@ -7538,14 +7388,10 @@ a Processor</div>
<dd> </dd>
<dt><a href="org/pingel/util/package-summary.html">org.pingel.util</a> - package org.pingel.util</dt>
<dd> </dd>
-<dt><a href="org/purl/wf4ever/provtaverna/owl/package-summary.html">org.purl.wf4ever.provtaverna.owl</a> - package org.purl.wf4ever.provtaverna.owl</dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.html#outgoingJobs">outgoingJobs</a></span> - Variable in class org.apache.taverna.workflowmodel.processor.dispatch.layers.<a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.layers">Loop</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.html#outgoingLinks">outgoingLinks</a></span> - Variable in class org.apache.taverna.workflowmodel.impl.<a href="org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.html" title="class in org.apache.taverna.workflowmodel.impl">BasicEventForwardingOutputPort</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#Output">Output</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/report/ReportListener.html#outputAdded-java.nio.file.Path-java.lang.String-int:A-">outputAdded(Path, String, int[])</a></span> - Method in interface org.apache.taverna.platform.report.<a href="org/apache/taverna/platform/report/ReportListener.html" title="interface in org.apache.taverna.platform.report">ReportListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/report/StatusReport.html#outputAdded-java.nio.file.Path-java.lang.String-int:A-">outputAdded(Path, String, int[])</a></span> - Method in class org.apache.taverna.platform.report.<a href="org/apache/taverna/platform/report/StatusReport.html" title="class in org.apache.taverna.platform.report">StatusReport</a></dt>
@@ -7578,10 +7424,6 @@ a Processor</div>
</a>
<h2 class="title">P</h2>
<dl>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#pairEntity">pairEntity</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#pairKey">pairKey</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.html" title="class in org.apache.taverna.workflowmodel.processor.dispatch.layers"><span class="typeNameLink">Parallelize</span></a> - Class in <a href="org/apache/taverna/workflowmodel/processor/dispatch/layers/package-summary.html">org.apache.taverna.workflowmodel.processor.dispatch.layers</a></dt>
<dd>
<div class="block">Dispatch layer which consumes a queue of events and fires off a fixed number
@@ -7672,10 +7514,6 @@ a Processor</div>
<dd>
<div class="block">Pause the workflow run corresponding to this facade</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#PAV">PAV</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#PAV_RDF">PAV_RDF</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/annotation/Person.html" title="interface in org.apache.taverna.annotation"><span class="typeNameLink">Person</span></a> - Interface in <a href="org/apache/taverna/annotation/package-summary.html">org.apache.taverna.annotation</a></dt>
<dd>
<div class="block">All metadata assertions and curation assertions have a person who is
@@ -7686,8 +7524,6 @@ a Processor</div>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/annotation/impl/PersonImpl.html#PersonImpl-java.lang.String-">PersonImpl(String)</a></span> - Constructor for class org.apache.taverna.annotation.impl.<a href="org/apache/taverna/annotation/impl/PersonImpl.html" title="class in org.apache.taverna.annotation.impl">PersonImpl</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#Plan">Plan</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/configuration/database/DatabaseConfiguration.html#POOL_MAX_ACTIVE">POOL_MAX_ACTIVE</a></span> - Static variable in interface org.apache.taverna.configuration.database.<a href="org/apache/taverna/configuration/database/DatabaseConfiguration.html" title="interface in org.apache.taverna.configuration.database">DatabaseConfiguration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/configuration/database/DatabaseConfiguration.html#POOL_MAX_IDLE">POOL_MAX_IDLE</a></span> - Static variable in interface org.apache.taverna.configuration.database.<a href="org/apache/taverna/configuration/database/DatabaseConfiguration.html" title="interface in org.apache.taverna.configuration.database">DatabaseConfiguration</a></dt>
@@ -7758,8 +7594,6 @@ a Processor</div>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/monitor/impl/MonitorTreeModel.html#printProcess-java.lang.String:A-">printProcess(String[])</a></span> - Method in class org.apache.taverna.monitor.impl.<a href="org/apache/taverna/monitor/impl/MonitorTreeModel.html" title="class in org.apache.taverna.monitor.impl">MonitorTreeModel</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#Process">Process</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/invocation/ProcessIdentifierException.html" title="class in org.apache.taverna.invocation"><span class="typeNameLink">ProcessIdentifierException</span></a> - Exception in <a href="org/apache/taverna/invocation/package-summary.html">org.apache.taverna.invocation</a></dt>
<dd>
<div class="block">Thrown when attempting to create an invalid process identifier, either by
@@ -7828,7 +7662,7 @@ a Processor</div>
<dd> </dd>
<dt><a href="org/apache/taverna/platform/report/ProcessorReport.html" title="class in org.apache.taverna.platform.report"><span class="typeNameLink">ProcessorReport</span></a> - Class in <a href="org/apache/taverna/platform/report/package-summary.html">org.apache.taverna.platform.report</a></dt>
<dd>
-<div class="block">Report about the <a href="org/apache/taverna/platform/report/State.html" title="enum in org.apache.taverna.platform.report"><code>State</code></a> of a <code>Processor</code> invocation.</div>
+<div class="block">Report about the <a href="org/apache/taverna/platform/report/State.html" title="enum in org.apache.taverna.platform.report"><code>State</code></a> of a <a href="https://taverna.incubator.apache.org/javadoc/taverna-language/org/apache/taverna/scufl2/api/core/Processor.html?is-external=true" title="class or interface in org.apache.taverna.scufl2.api.core"><code>Processor</code></a> invocation.</div>
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/platform/report/ProcessorReport.html#ProcessorReport-org.apache.taverna.scufl2.api.core.Processor-">ProcessorReport(Processor)</a></span> - Constructor for class org.apache.taverna.platform.report.<a href="org/apache/taverna/platform/report/ProcessorReport.html" title="class in org.apache.taverna.platform.report">ProcessorReport</a></dt>
<dd>
@@ -7841,8 +7675,6 @@ a Processor</div>
</dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/provenance/item/ProcessProvenanceItem.html#ProcessProvenanceItem--">ProcessProvenanceItem()</a></span> - Constructor for class org.apache.taverna.provenance.item.<a href="org/apache/taverna/provenance/item/ProcessProvenanceItem.html" title="class in org.apache.taverna.provenance.item">ProcessProvenanceItem</a></dt>
<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html#ProcessRun">ProcessRun</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/WfprovModel.html" title="class in org.purl.wf4ever.provtaverna.owl">WfprovModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/security/credentialmanager/CredentialManager.html#PROPERTY_KEYSTORE">PROPERTY_KEYSTORE</a></span> - Static variable in interface org.apache.taverna.security.credentialmanager.<a href="org/apache/taverna/security/credentialmanager/CredentialManager.html" title="interface in org.apache.taverna.security.credentialmanager">CredentialManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/security/credentialmanager/CredentialManager.html#PROPERTY_KEYSTORE_PASSWORD">PROPERTY_KEYSTORE_PASSWORD</a></span> - Static variable in interface org.apache.taverna.security.credentialmanager.<a href="org/apache/taverna/security/credentialmanager/CredentialManager.html" title="interface in org.apache.taverna.security.credentialmanager">CredentialManager</a></dt>
@@ -7864,22 +7696,6 @@ a Processor</div>
<div class="block">Used by dispatch layers which can contribute property information to their
parent processor instance.</div>
</dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#PROV">PROV</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#prov">prov</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#PROV_AQ_RDF">PROV_AQ_RDF</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#PROV_DICTIONARY">PROV_DICTIONARY</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#PROV_DICTIONARY_TTL">PROV_DICTIONARY_TTL</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#PROV_O">PROV_O</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#PROV_O_RDF">PROV_O_RDF</a></span> - Static variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#provDict">provDict</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><a href="org/apache/taverna/provenance/item/ProvenanceItem.html" title="interface in org.apache.taverna.provenance.item"><span class="typeNameLink">ProvenanceItem</span></a> - Interface in <a href="org/apache/taverna/provenance/item/package-summary.html">org.apache.taverna.provenance.item</a></dt>
<dd>
<div class="block">Used to store some enactment information during a workflow run</div>
@@ -7888,12 +7704,6 @@ a Processor</div>
<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/security/credentialmanager/MasterPasswordProvider.ProviderComparator.html#ProviderComparator--">ProviderComparator()</a></span> - Constructor for class org.apache.taverna.security.credentialmanager.<a href="org/apache/taverna/security/credentialmanager/MasterPasswordProvider.ProviderComparator.html" title="class in org.apache.taverna.security.credentialmanager">MasterPasswordProvider.ProviderComparator</a></dt>
<dd> </dd>
-<dt><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl"><span class="typeNameLink">ProvModel</span></a> - Class in <a href="org/purl/wf4ever/provtaverna/owl/package-summary.html">org.purl.wf4ever.provtaverna.owl</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#ProvModel--">ProvModel()</a></span> - Constructor for class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#ProvModel-org.apache.jena.rdf.model.Model-">ProvModel(Model)</a></span> - Constructor for class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
<dt><span class="memberNameLink"><a href="org/apache/taverna/workflowmodel/utils/AnnotationTools.html#pruneAnnotations-org.apache.taverna.annotation.Annotated-org.apache.taverna.workflowmodel.Edits-">pruneAnnotations(Annotated<?>, Edits)</a></span> - Static method in class org.apache.taverna.workflowmodel.utils.<a href="org/apache/taverna/workflowmodel/utils/AnnotationTools.html" title="class in org.apache.taverna.workflowmodel.utils">AnnotationTools</a></dt>
<dd>
<div class="block">Remove out of date annotations unless many of that class are allowed, or
@@ -7995,24 +7805,6 @@ a Processor</div>
before returning from the dao method</div>
</dd>
</dl>
-<a name="I:Q">
-<!-- -->
-</a>
-<h2 class="title">Q</h2>
-<dl>
-<dt><span class="memberNameLink"><a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html#qualifiedAssociation">qualifiedAssociation</a></span> - Variable in class org.purl.wf4ever.provtaverna.owl.<a href="org/purl/wf4ever/provtaverna/owl/ProvModel.html" title="class in org.purl.wf4ever.provtaverna.owl">ProvModel</a></dt>
-<dd> </dd>
[... 324 lines stripped ...]