You are viewing a plain text version of this content. The canonical link for it is here.
Posted to dev@ctakes.apache.org by "Finan, Sean" <Se...@childrens.harvard.edu> on 2017/07/27 13:34:19 UTC
RE: Medical record summarization [EXTERNAL]
Hi Abilash,
I don't know of any module that already does this ... but if anybody does have even the beginnings of one I am sure a lot of people would be interested!
I think that a possible quick start could be to use a sectionizer to divide up the note, then focus upon some sections (reason for visit, diagnosis, summaries) more than others (histories?) when inspecting the extracted data.
All,
Has anybody out there already done this or something similar?
Sean
-----Original Message-----
From: Abilash.Mathew@cognizant.com [mailto:Abilash.Mathew@cognizant.com]
Sent: Thursday, July 27, 2017 3:31 AM
To: dev@ctakes.apache.org
Subject: Medical record summarization [EXTERNAL]
Hi CTAKES Team,
We have started exploring CTAKES API for the Medical record summarization use case. Is there a module which would help us to do the medical record summarization post the entity extraction in CTAKES?
Thanks,
Abilash Mathew
This e-mail and any files transmitted with it are for the sole use of the intended recipient(s) and may contain confidential and privileged information. If you are not the intended recipient(s), please reply to the sender and destroy all copies of the original message. Any unauthorized review, use, disclosure, dissemination, forwarding, printing or copying of this email, and/or any action taken in reliance on the contents of this e-mail is strictly prohibited and may be unlawful. Where permitted by applicable law, this e-mail and other e-mail communications sent to and from Cognizant e-mail addresses may be monitored.
RE: Medical record summarization [EXTERNAL]
Posted by Ab...@cognizant.com.
Thanks Perter for the details. We are now exploring the solution at our end. It would be great , if you can share some insight into the approach that you have followed.
Thanks,
Abilash Mathew
-----Original Message-----
From: Abramowitsch, Peter [mailto:pabramowitsch@hearst.com]
Sent: Monday, August 07, 2017 10:16 PM
To: dev@ctakes.apache.org
Subject: Re: Medical record summarization [EXTERNAL]
I have built a type of medical summary module, but the ctakes output was only a part of the data source and where it was, there was a great deal of post processing on the CAS, so I suppose it doesn't really classify as a Ctakes module. However, I'd be interested in any attempts that others have made in that direction.
- Peter
On 8/4/17, 4:18 AM, "Abilash.Mathew@cognizant.com"
<Ab...@cognizant.com> wrote:
>Thank you Sean for the inputs. We will let you know the progress.
>
>Thanks,
>Abilash Mathew
>
>-----Original Message-----
>From: Finan, Sean [mailto:Sean.Finan@childrens.harvard.edu]
>Sent: Thursday, July 27, 2017 7:04 PM
>To: dev@ctakes.apache.org
>Subject: RE: Medical record summarization [EXTERNAL]
>
>Hi Abilash,
>
>I don't know of any module that already does this ... but if anybody
>does have even the beginnings of one I am sure a lot of people would be
>interested!
>
>I think that a possible quick start could be to use a sectionizer to
>divide up the note, then focus upon some sections (reason for visit,
>diagnosis, summaries) more than others (histories?) when inspecting the
>extracted data.
>
>All,
>Has anybody out there already done this or something similar?
>
>Sean
>
>-----Original Message-----
>From: Abilash.Mathew@cognizant.com
>[mailto:Abilash.Mathew@cognizant.com]
>Sent: Thursday, July 27, 2017 3:31 AM
>To: dev@ctakes.apache.org
>Subject: Medical record summarization [EXTERNAL]
>
>Hi CTAKES Team,
>
>We have started exploring CTAKES API for the Medical record
>summarization use case. Is there a module which would help us to do the
>medical record summarization post the entity extraction in CTAKES?
>
>Thanks,
>Abilash Mathew
>
>
>
>This e-mail and any files transmitted with it are for the sole use of
>the intended recipient(s) and may contain confidential and privileged
>information. If you are not the intended recipient(s), please reply to
>the sender and destroy all copies of the original message. Any
>unauthorized review, use, disclosure, dissemination, forwarding,
>printing or copying of this email, and/or any action taken in reliance
>on the contents of this e-mail is strictly prohibited and may be
>unlawful. Where permitted by applicable law, this e-mail and other
>e-mail communications sent to and from Cognizant e-mail addresses may be monitored.
>This e-mail and any files transmitted with it are for the sole use of
>the intended recipient(s) and may contain confidential and privileged
>information. If you are not the intended recipient(s), please reply to
>the sender and destroy all copies of the original message. Any
>unauthorized review, use, disclosure, dissemination, forwarding,
>printing or copying of this email, and/or any action taken in reliance
>on the contents of this e-mail is strictly prohibited and may be
>unlawful. Where permitted by applicable law, this e-mail and other
>e-mail communications sent to and from Cognizant e-mail addresses may be monitored.
This e-mail and any files transmitted with it are for the sole use of the intended recipient(s) and may contain confidential and privileged information. If you are not the intended recipient(s), please reply to the sender and destroy all copies of the original message. Any unauthorized review, use, disclosure, dissemination, forwarding, printing or copying of this email, and/or any action taken in reliance on the contents of this e-mail is strictly prohibited and may be unlawful. Where permitted by applicable law, this e-mail and other e-mail communications sent to and from Cognizant e-mail addresses may be monitored.
Re: Medical record summarization [EXTERNAL]
Posted by "Abramowitsch, Peter" <pa...@hearst.com>.
I have built a type of medical summary module, but the ctakes output was
only a part of the data source and where it was, there was a great deal of
post processing on the CAS, so I suppose it doesn't really classify as a
Ctakes module. However, I'd be interested in any attempts that others have
made in that direction.
- Peter
On 8/4/17, 4:18 AM, "Abilash.Mathew@cognizant.com"
<Ab...@cognizant.com> wrote:
>Thank you Sean for the inputs. We will let you know the progress.
>
>Thanks,
>Abilash Mathew
>
>-----Original Message-----
>From: Finan, Sean [mailto:Sean.Finan@childrens.harvard.edu]
>Sent: Thursday, July 27, 2017 7:04 PM
>To: dev@ctakes.apache.org
>Subject: RE: Medical record summarization [EXTERNAL]
>
>Hi Abilash,
>
>I don't know of any module that already does this ... but if anybody does
>have even the beginnings of one I am sure a lot of people would be
>interested!
>
>I think that a possible quick start could be to use a sectionizer to
>divide up the note, then focus upon some sections (reason for visit,
>diagnosis, summaries) more than others (histories?) when inspecting the
>extracted data.
>
>All,
>Has anybody out there already done this or something similar?
>
>Sean
>
>-----Original Message-----
>From: Abilash.Mathew@cognizant.com [mailto:Abilash.Mathew@cognizant.com]
>Sent: Thursday, July 27, 2017 3:31 AM
>To: dev@ctakes.apache.org
>Subject: Medical record summarization [EXTERNAL]
>
>Hi CTAKES Team,
>
>We have started exploring CTAKES API for the Medical record summarization
>use case. Is there a module which would help us to do the medical record
>summarization post the entity extraction in CTAKES?
>
>Thanks,
>Abilash Mathew
>
>
>
>This e-mail and any files transmitted with it are for the sole use of the
>intended recipient(s) and may contain confidential and privileged
>information. If you are not the intended recipient(s), please reply to
>the sender and destroy all copies of the original message. Any
>unauthorized review, use, disclosure, dissemination, forwarding, printing
>or copying of this email, and/or any action taken in reliance on the
>contents of this e-mail is strictly prohibited and may be unlawful. Where
>permitted by applicable law, this e-mail and other e-mail communications
>sent to and from Cognizant e-mail addresses may be monitored.
>This e-mail and any files transmitted with it are for the sole use of the
>intended recipient(s) and may contain confidential and privileged
>information. If you are not the intended recipient(s), please reply to
>the sender and destroy all copies of the original message. Any
>unauthorized review, use, disclosure, dissemination, forwarding, printing
>or copying of this email, and/or any action taken in reliance on the
>contents of this e-mail is strictly prohibited and may be unlawful. Where
>permitted by applicable law, this e-mail and other e-mail communications
>sent to and from Cognizant e-mail addresses may be monitored.
RE: Medical record summarization [EXTERNAL]
Posted by Ab...@cognizant.com.
Thank you Sean for the inputs. We will let you know the progress.
Thanks,
Abilash Mathew
-----Original Message-----
From: Finan, Sean [mailto:Sean.Finan@childrens.harvard.edu]
Sent: Thursday, July 27, 2017 7:04 PM
To: dev@ctakes.apache.org
Subject: RE: Medical record summarization [EXTERNAL]
Hi Abilash,
I don't know of any module that already does this ... but if anybody does have even the beginnings of one I am sure a lot of people would be interested!
I think that a possible quick start could be to use a sectionizer to divide up the note, then focus upon some sections (reason for visit, diagnosis, summaries) more than others (histories?) when inspecting the extracted data.
All,
Has anybody out there already done this or something similar?
Sean
-----Original Message-----
From: Abilash.Mathew@cognizant.com [mailto:Abilash.Mathew@cognizant.com]
Sent: Thursday, July 27, 2017 3:31 AM
To: dev@ctakes.apache.org
Subject: Medical record summarization [EXTERNAL]
Hi CTAKES Team,
We have started exploring CTAKES API for the Medical record summarization use case. Is there a module which would help us to do the medical record summarization post the entity extraction in CTAKES?
Thanks,
Abilash Mathew
This e-mail and any files transmitted with it are for the sole use of the intended recipient(s) and may contain confidential and privileged information. If you are not the intended recipient(s), please reply to the sender and destroy all copies of the original message. Any unauthorized review, use, disclosure, dissemination, forwarding, printing or copying of this email, and/or any action taken in reliance on the contents of this e-mail is strictly prohibited and may be unlawful. Where permitted by applicable law, this e-mail and other e-mail communications sent to and from Cognizant e-mail addresses may be monitored.
This e-mail and any files transmitted with it are for the sole use of the intended recipient(s) and may contain confidential and privileged information. If you are not the intended recipient(s), please reply to the sender and destroy all copies of the original message. Any unauthorized review, use, disclosure, dissemination, forwarding, printing or copying of this email, and/or any action taken in reliance on the contents of this e-mail is strictly prohibited and may be unlawful. Where permitted by applicable law, this e-mail and other e-mail communications sent to and from Cognizant e-mail addresses may be monitored.