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Posted to commits@commons.apache.org by ah...@apache.org on 2019/05/25 06:44:56 UTC

[commons-statistics] branch develop updated (cbdb5d4 -> 4f404bc)

This is an automated email from the ASF dual-hosted git repository.

aherbert pushed a change to branch develop
in repository https://gitbox.apache.org/repos/asf/commons-statistics.git.


    from cbdb5d4  Merge pull request #9 from aherbert/method-refs-for-samplers
     add 535db16  Updated checkstyle to enforce coding style.
     add a911c0e  Merge pull request #10 from aherbert/update-checkstyle
     add 477f2ed  Removed jacoco version 0.8.0. Parent 48 has 0.8.3 and supports JDK 11.
     add fe76229  Update PMD since the current rules are deprecated.
     add 7594fcd  Renamed SaddlePointExpansion to SaddlePointExpansionUtils.
     add 8e8de51  Merge pull request #13 from aherbert/update-pmd
     add c92d17d  Introduce end-of-line normalization
     add 8a2d4d8  Merge pull request #15 from aherbert/eol-normalisation
     new 4a693bf  STATISTICS-7: Adding a new 'commons-statistics-descriptive' module.
     new 4f404bc  Updated descriptives package info summary.

The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .gitattributes                                     |   1 +
 CONTRIBUTING.md                                    |   6 +-
 .../CONTRIBUTING.md                                |  10 +-
 .../LICENSE.txt                                    |   0
 .../NOTICE.txt                                     |   2 +-
 .../README.md                                      |  22 +-
 commons-statistics-descriptive/pom.xml             |  42 +++
 .../statistics/descriptive/package-info.java       |   5 +
 .../AbstractContinuousDistribution.java            |  48 ++-
 .../distribution/AbstractDiscreteDistribution.java |  23 +-
 .../statistics/distribution/BetaDistribution.java  |   8 +-
 .../distribution/BinomialDistribution.java         |   2 +-
 .../distribution/DistributionException.java        |  14 +-
 .../distribution/ExponentialDistribution.java      |   4 +-
 .../statistics/distribution/FDistribution.java     |  13 +-
 .../statistics/distribution/GammaDistribution.java |   5 +-
 .../distribution/GeometricDistribution.java        |   2 +-
 .../distribution/HypergeometricDistribution.java   |  29 +-
 .../distribution/LaplaceDistribution.java          |   5 +-
 .../statistics/distribution/LevyDistribution.java  |   2 +-
 .../distribution/LogNormalDistribution.java        |  11 +-
 .../distribution/NakagamiDistribution.java         |   9 +-
 .../distribution/NormalDistribution.java           |   9 +-
 .../distribution/ParetoDistribution.java           |  11 +-
 .../distribution/PoissonDistribution.java          |   8 +-
 ...pansion.java => SaddlePointExpansionUtils.java} |  93 ++---
 .../statistics/distribution/TDistribution.java     |   2 +-
 .../distribution/TriangularDistribution.java       |  16 +-
 .../UniformContinuousDistribution.java             |   6 +-
 .../distribution/UniformDiscreteDistribution.java  |   8 +-
 .../distribution/WeibullDistribution.java          |   2 +-
 .../statistics/distribution/ZipfDistribution.java  |   5 +-
 .../AbstractDiscreteDistributionTest.java          |  31 +-
 .../distribution/BinomialDistributionTest.java     |  54 +--
 .../distribution/CauchyDistributionTest.java       |   4 +-
 .../ConstantContinuousDistributionTest.java        |   2 +-
 .../ContinuousDistributionAbstractTest.java        |  19 +-
 .../DiscreteDistributionAbstractTest.java          |  16 +-
 .../distribution/ExponentialDistributionTest.java  |  10 +-
 .../statistics/distribution/FDistributionTest.java |   4 +-
 .../distribution/GammaDistributionTest.java        |   8 +-
 .../distribution/GeometricDistributionTest.java    |   8 +-
 .../HypergeometricDistributionTest.java            |  39 +-
 .../distribution/LogNormalDistributionTest.java    |  49 ++-
 .../distribution/NormalDistributionTest.java       |  26 +-
 .../distribution/ParetoDistributionTest.java       |  27 +-
 .../distribution/PascalDistributionTest.java       |  37 +-
 .../distribution/PoissonDistributionTest.java      |  40 +-
 .../statistics/distribution/TDistributionTest.java |  30 +-
 .../commons/statistics/distribution/TestUtils.java |  16 +-
 .../distribution/TriangularDistributionTest.java   |  44 ++-
 .../UniformContinuousDistributionTest.java         |  12 +-
 .../UniformDiscreteDistributionTest.java           |   2 +-
 .../distribution/WeibullDistributionTest.java      |   4 +-
 .../distribution/ZipfDistributionTest.java         |  17 +-
 pom.xml                                            |  20 +-
 .../checkstyle/checkstyle-suppressions.xml         |   7 +
 src/main/resources/checkstyle/checkstyle.xml       | 230 ++++++++----
 src/main/resources/pmd/pmd-ruleset.xml             |  88 ++++-
 .../resources/spotbugs/spotbugs-exclude-filter.xml |   2 +-
 src/site/xdoc/download_statistics.xml              | 146 ++++----
 src/site/xdoc/issue-tracking.xml                   | 204 +++++-----
 src/site/xdoc/mail-lists.xml                       | 410 ++++++++++-----------
 63 files changed, 1117 insertions(+), 912 deletions(-)
 create mode 100644 .gitattributes
 copy CONTRIBUTING.md => commons-statistics-descriptive/CONTRIBUTING.md (92%)
 copy {commons-statistics-regression => commons-statistics-descriptive}/LICENSE.txt (100%)
 copy NOTICE.txt => commons-statistics-descriptive/NOTICE.txt (83%)
 copy README.md => commons-statistics-descriptive/README.md (81%)
 create mode 100644 commons-statistics-descriptive/pom.xml
 copy src/main/resources/checkstyle/license-header.txt => commons-statistics-descriptive/src/main/java/org/apache/commons/statistics/descriptive/package-info.java (87%)
 rename commons-statistics-distribution/src/main/java/org/apache/commons/statistics/distribution/{SaddlePointExpansion.java => SaddlePointExpansionUtils.java} (67%)


[commons-statistics] 01/02: STATISTICS-7: Adding a new 'commons-statistics-descriptive' module.

Posted by ah...@apache.org.
This is an automated email from the ASF dual-hosted git repository.

aherbert pushed a commit to branch develop
in repository https://gitbox.apache.org/repos/asf/commons-statistics.git

commit 4a693bf3a20f8057a5d05e6324290f1206173b2a
Author: virendrasinghrp <vi...@gmail.com>
AuthorDate: Wed May 22 04:07:10 2019 +0530

    STATISTICS-7: Adding a new 'commons-statistics-descriptive' module.
    
    This is a single commit comprising all changes from Virendra Singhrp to initialise the module.
    
    Close #14.
---
 CONTRIBUTING.md                                    |   6 +-
 .../CONTRIBUTING.md                                |  10 +-
 commons-statistics-descriptive/LICENSE.txt         | 275 +++++++++++++++++++++
 commons-statistics-descriptive/NOTICE.txt          |   5 +
 commons-statistics-descriptive/README.md           | 105 ++++++++
 commons-statistics-descriptive/pom.xml             |  42 ++++
 .../statistics/descriptive/package-info.java       |  22 ++
 pom.xml                                            |   1 +
 8 files changed, 458 insertions(+), 8 deletions(-)

diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md
index 2530cfb..5cbd7cb 100644
--- a/CONTRIBUTING.md
+++ b/CONTRIBUTING.md
@@ -25,7 +25,7 @@
  | commons-build-plugin/trunk/src/main/resources/commons-xdoc-templates |
  +======================================================================+
  |                                                                      |
- | 1) Re-generate using: mvn commons:contributing-md                    |
+ | 1) Re-generate using: mvn commons-build:contributing-md              |
  |                                                                      |
  | 2) Set the following properties in the component's pom:              |
  |    - commons.jira.id  (required, alphabetic, upper case)             |
@@ -50,7 +50,7 @@ Getting Started
 
 + Make sure you have a [JIRA account](https://issues.apache.org/jira/).
 + Make sure you have a [GitHub account](https://github.com/signup/free).
-+ If you're planning to implement a new feature it makes sense to discuss you're changes on the [dev list](https://commons.apache.org/mail-lists.html) first. This way you can make sure you're not wasting your time on something that isn't considered to be in Apache Commons Statistics's scope.
++ If you're planning to implement a new feature it makes sense to discuss your changes on the [dev list](https://commons.apache.org/mail-lists.html) first. This way you can make sure you're not wasting your time on something that isn't considered to be in Apache Commons Statistics's scope.
 + Submit a [Jira Ticket][jira] for your issue, assuming one does not already exist.
   + Clearly describe the issue including steps to reproduce when it is a bug.
   + Make sure you fill in the earliest version that you know has the issue.
@@ -107,7 +107,7 @@ Additional Resources
 + [Apache Commons Statistics JIRA project page][jira]
 + [Contributor License Agreement][cla]
 + [General GitHub documentation](https://help.github.com/)
-+ [GitHub pull request documentation](https://help.github.com/send-pull-requests/)
++ [GitHub pull request documentation](https://help.github.com/articles/creating-a-pull-request/)
 + [Apache Commons Twitter Account](https://twitter.com/ApacheCommons)
 + `#apache-commons` IRC channel on `irc.freenode.net`
 
diff --git a/CONTRIBUTING.md b/commons-statistics-descriptive/CONTRIBUTING.md
similarity index 92%
copy from CONTRIBUTING.md
copy to commons-statistics-descriptive/CONTRIBUTING.md
index 2530cfb..33ccf97 100644
--- a/CONTRIBUTING.md
+++ b/commons-statistics-descriptive/CONTRIBUTING.md
@@ -25,7 +25,7 @@
  | commons-build-plugin/trunk/src/main/resources/commons-xdoc-templates |
  +======================================================================+
  |                                                                      |
- | 1) Re-generate using: mvn commons:contributing-md                    |
+ | 1) Re-generate using: mvn commons-build:contributing-md              |
  |                                                                      |
  | 2) Set the following properties in the component's pom:              |
  |    - commons.jira.id  (required, alphabetic, upper case)             |
@@ -38,7 +38,7 @@
  |                                                                      |
  +======================================================================+
 --->
-Contributing to Apache Commons Statistics
+Contributing to commons-statistics-descriptive
 ======================
 
 You have found a bug or you have an idea for a cool new feature? Contributing code is a great way to give something back to
@@ -50,7 +50,7 @@ Getting Started
 
 + Make sure you have a [JIRA account](https://issues.apache.org/jira/).
 + Make sure you have a [GitHub account](https://github.com/signup/free).
-+ If you're planning to implement a new feature it makes sense to discuss you're changes on the [dev list](https://commons.apache.org/mail-lists.html) first. This way you can make sure you're not wasting your time on something that isn't considered to be in Apache Commons Statistics's scope.
++ If you're planning to implement a new feature it makes sense to discuss your changes on the [dev list](https://commons.apache.org/mail-lists.html) first. This way you can make sure you're not wasting your time on something that isn't considered to be in commons-statistics-descriptive's scope.
 + Submit a [Jira Ticket][jira] for your issue, assuming one does not already exist.
   + Clearly describe the issue including steps to reproduce when it is a bug.
   + Make sure you fill in the earliest version that you know has the issue.
@@ -104,10 +104,10 @@ Additional Resources
 --------------------
 
 + [Contributing patches](https://commons.apache.org/patches.html)
-+ [Apache Commons Statistics JIRA project page][jira]
++ [commons-statistics-descriptive JIRA project page][jira]
 + [Contributor License Agreement][cla]
 + [General GitHub documentation](https://help.github.com/)
-+ [GitHub pull request documentation](https://help.github.com/send-pull-requests/)
++ [GitHub pull request documentation](https://help.github.com/articles/creating-a-pull-request/)
 + [Apache Commons Twitter Account](https://twitter.com/ApacheCommons)
 + `#apache-commons` IRC channel on `irc.freenode.net`
 
diff --git a/commons-statistics-descriptive/LICENSE.txt b/commons-statistics-descriptive/LICENSE.txt
new file mode 100644
index 0000000..de777e4
--- /dev/null
+++ b/commons-statistics-descriptive/LICENSE.txt
@@ -0,0 +1,275 @@
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+   NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+   SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+================================================================================
+
+Class "org.apache.commons.rng.internal.source32.MersenneTwister" contains
+Java code partly ported from the reference implementation in C.
+That source file contained the following notice:
+
+   Copyright (C) 1997 - 2002, Makoto Matsumoto and Takuji Nishimura,
+   All rights reserved.
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+================================================================================
diff --git a/commons-statistics-descriptive/NOTICE.txt b/commons-statistics-descriptive/NOTICE.txt
new file mode 100644
index 0000000..8f91d07
--- /dev/null
+++ b/commons-statistics-descriptive/NOTICE.txt
@@ -0,0 +1,5 @@
+commons-statistics-descriptive
+Copyright 2018-2019 The Apache Software Foundation
+
+This product includes software developed at
+The Apache Software Foundation (http://www.apache.org/).
diff --git a/commons-statistics-descriptive/README.md b/commons-statistics-descriptive/README.md
new file mode 100644
index 0000000..536e4c0
--- /dev/null
+++ b/commons-statistics-descriptive/README.md
@@ -0,0 +1,105 @@
+<!---
+ Licensed to the Apache Software Foundation (ASF) under one or more
+ contributor license agreements.  See the NOTICE file distributed with
+ this work for additional information regarding copyright ownership.
+ The ASF licenses this file to You under the Apache License, Version 2.0
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+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing, software
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+-->
+<!---
+ +======================================================================+
+ |****                                                              ****|
+ |****      THIS FILE IS GENERATED BY THE COMMONS BUILD PLUGIN      ****|
+ |****                    DO NOT EDIT DIRECTLY                      ****|
+ |****                                                              ****|
+ +======================================================================+
+ | TEMPLATE FILE: readme-md-template.md                                 |
+ | commons-build-plugin/trunk/src/main/resources/commons-xdoc-templates |
+ +======================================================================+
+ |                                                                      |
+ | 1) Re-generate using: mvn commons-build:readme-md                    |
+ |                                                                      |
+ | 2) Set the following properties in the component's pom:              |
+ |    - commons.componentid (required, alphabetic, lower case)          |
+ |    - commons.release.version (required)                              |
+ |                                                                      |
+ | 3) Example Properties                                                |
+ |                                                                      |
+ |  <properties>                                                        |
+ |    <commons.componentid>math</commons.componentid>                   |
+ |    <commons.release.version>1.2</commons.release.version>            |
+ |  </properties>                                                       |
+ |                                                                      |
+ +======================================================================+
+--->
+commons-statistics-descriptive
+===================
+
+[![Build Status](https://travis-ci.org/apache/commons-statistics.svg)](https://travis-ci.org/apache/commons-statistics)
+[![Coverage Status](https://coveralls.io/repos/apache/commons-statistics/badge.svg)](https://coveralls.io/r/apache/commons-statistics)
+[![Maven Central](https://maven-badges.herokuapp.com/maven-central/org.apache.commons/commons-statistics-descriptive/badge.svg)](https://maven-badges.herokuapp.com/maven-central/org.apache.commons/commons-statistics-descriptive/)
+[![Javadocs](https://javadoc.io/badge/org.apache.commons/commons-statistics-descriptive/1.0.svg)](https://javadoc.io/doc/org.apache.commons/commons-statistics-descriptive/1.0)
+
+The Apache Commons Statistics project provides tools for statistics.
+
+Documentation
+-------------
+
+More information can be found on the [commons-statistics-descriptive homepage](https://commons.apache.org/proper/commons-statistics).
+The [Javadoc](https://commons.apache.org/proper/commons-statistics/apidocs) can be browsed.
+Questions related to the usage of commons-statistics-descriptive should be posted to the [user mailing list][ml].
+
+Where can I get the latest release?
+-----------------------------------
+You can download source and binaries from our [download page](https://commons.apache.org/proper/commons-statistics/download_statistics.cgi).
+
+Alternatively you can pull it from the central Maven repositories:
+
+```xml
+<dependency>
+  <groupId>org.apache.commons</groupId>
+  <artifactId>commons-statistics-descriptive</artifactId>
+  <version>1.0</version>
+</dependency>
+```
+
+Contributing
+------------
+
+We accept Pull Requests via GitHub. The [developer mailing list][ml] is the main channel of communication for contributors.
+There are some guidelines which will make applying PRs easier for us:
++ No tabs! Please use spaces for indentation.
++ Respect the code style.
++ Create minimal diffs - disable on save actions like reformat source code or organize imports. If you feel the source code should be reformatted create a separate PR for this change.
++ Provide JUnit tests for your changes and make sure your changes don't break any existing tests by running ```mvn clean test```.
+
+If you plan to contribute on a regular basis, please consider filing a [contributor license agreement](https://www.apache.org/licenses/#clas).
+You can learn more about contributing via GitHub in our [contribution guidelines](CONTRIBUTING.md).
+
+License
+-------
+This code is under the [Apache Licence v2](https://www.apache.org/licenses/LICENSE-2.0).
+
+See the `NOTICE.txt` file for required notices and attributions.
+
+Donations
+---------
+You like commons-statistics-descriptive? Then [donate back to the ASF](https://www.apache.org/foundation/contributing.html) to support the development.
+
+Additional Resources
+--------------------
+
++ [Apache Commons Homepage](https://commons.apache.org/)
++ [Apache Issue Tracker (JIRA)](https://issues.apache.org/jira/browse/STATISTICS)
++ [Apache Commons Twitter Account](https://twitter.com/ApacheCommons)
++ `#apache-commons` IRC channel on `irc.freenode.org`
+
+[ml]:https://commons.apache.org/mail-lists.html
diff --git a/commons-statistics-descriptive/pom.xml b/commons-statistics-descriptive/pom.xml
new file mode 100644
index 0000000..0ce49d8
--- /dev/null
+++ b/commons-statistics-descriptive/pom.xml
@@ -0,0 +1,42 @@
+<?xml version="1.0"?>
+<!--
+   Licensed to the Apache Software Foundation (ASF) under one or more
+   contributor license agreements.  See the NOTICE file distributed with
+   this work for additional information regarding copyright ownership.
+   The ASF licenses this file to You under the Apache License, Version 2.0
+   (the "License"); you may not use this file except in compliance with
+   the License.  You may obtain a copy of the License at
+
+       http://www.apache.org/licenses/LICENSE-2.0
+
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License.
+-->
+<project xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd" xmlns="http://maven.apache.org/POM/4.0.0"
+    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.apache.commons</groupId>
+    <artifactId>commons-statistics-parent</artifactId>
+    <version>0.1-SNAPSHOT</version>
+  </parent>
+  <groupId>org.apache.commons</groupId>
+  <artifactId>commons-statistics-descriptive</artifactId>
+  <version>0.1-SNAPSHOT</version>
+  <name>Apache Commons Statistics Descriptive</name>
+  <description>Descriptive/Summary Statistics.</description>
+  <properties>
+    <!-- This value must reflect the current name of the base package. -->
+    <commons.osgi.symbolicName>org.apache.commons.statistics.descriptive</commons.osgi.symbolicName>
+    <!-- OSGi -->
+    <commons.osgi.export>org.apache.commons.statistics.descriptive</commons.osgi.export>
+    <!-- Workaround to avoid duplicating config files. -->
+    <statistics.parent.dir>${basedir}/..</statistics.parent.dir>
+    <!-- TODO: This tag should be removed or changed to false when code files are added in "commons-statistics-descriptive" module.-->
+    <!-- This tag is added only because there are no public classes to document.-->
+    <maven.javadoc.skip>true</maven.javadoc.skip>
+  </properties>
+</project>
diff --git a/commons-statistics-descriptive/src/main/java/org/apache/commons/statistics/descriptive/package-info.java b/commons-statistics-descriptive/src/main/java/org/apache/commons/statistics/descriptive/package-info.java
new file mode 100644
index 0000000..744c7c0
--- /dev/null
+++ b/commons-statistics-descriptive/src/main/java/org/apache/commons/statistics/descriptive/package-info.java
@@ -0,0 +1,22 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements.  See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License.  You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+/**
+ *
+ *        All the commons-statistics-descriptive related classes are present in this package.
+ */
+package org.apache.commons.statistics.descriptive;
+
diff --git a/pom.xml b/pom.xml
index 1d0bd58..aa7a2ee 100644
--- a/pom.xml
+++ b/pom.xml
@@ -626,6 +626,7 @@
   <modules>
     <module>commons-statistics-distribution</module>
     <module>commons-statistics-regression</module>
+    <module>commons-statistics-descriptive</module>
   </modules>
 
 </project>


[commons-statistics] 02/02: Updated descriptives package info summary.

Posted by ah...@apache.org.
This is an automated email from the ASF dual-hosted git repository.

aherbert pushed a commit to branch develop
in repository https://gitbox.apache.org/repos/asf/commons-statistics.git

commit 4f404bce7760ac5ba4d2c0bbd09ca5a8eb5e9523
Author: Alex Herbert <ah...@apache.org>
AuthorDate: Sat May 25 07:32:05 2019 +0100

    Updated descriptives package info summary.
---
 .../java/org/apache/commons/statistics/descriptive/package-info.java | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/commons-statistics-descriptive/src/main/java/org/apache/commons/statistics/descriptive/package-info.java b/commons-statistics-descriptive/src/main/java/org/apache/commons/statistics/descriptive/package-info.java
index 744c7c0..09e5cde 100644
--- a/commons-statistics-descriptive/src/main/java/org/apache/commons/statistics/descriptive/package-info.java
+++ b/commons-statistics-descriptive/src/main/java/org/apache/commons/statistics/descriptive/package-info.java
@@ -14,9 +14,8 @@
  * See the License for the specific language governing permissions and
  * limitations under the License.
  */
+
 /**
- *
- *        All the commons-statistics-descriptive related classes are present in this package.
+ * Implementations of summary and descriptive statistics.
  */
 package org.apache.commons.statistics.descriptive;
-