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Posted to issues@spark.apache.org by "Apache Spark (JIRA)" <ji...@apache.org> on 2016/11/04 13:59:58 UTC
[jira] [Assigned] (SPARK-18269) NumberFormatException when reading
csv for a nullable column
[ https://issues.apache.org/jira/browse/SPARK-18269?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Apache Spark reassigned SPARK-18269:
------------------------------------
Assignee: (was: Apache Spark)
> NumberFormatException when reading csv for a nullable column
> ------------------------------------------------------------
>
> Key: SPARK-18269
> URL: https://issues.apache.org/jira/browse/SPARK-18269
> Project: Spark
> Issue Type: Bug
> Components: SQL
> Affects Versions: 2.0.1
> Reporter: Jork Zijlstra
>
> Having a schema with a nullable column thrown an java.lang.NumberFormatException: null when the data + delimeter isn't specified in the csv.
> Specifying the schema:
> StructType(Array(
> StructField("id", IntegerType, nullable = false),
> StructField("underlyingId", IntegerType, true)
> ))
> Data (without trailing delimeter to specify the second column):
> 1
> Read the data:
> sparkSession.read
> .schema(sourceSchema)
> .option("header", "false")
> .option("delimiter", """\t""")
> .csv(files(dates): _*)
> .rdd
> Actual Result:
> java.lang.NumberFormatException: null
> at java.lang.Integer.parseInt(Integer.java:542)
> at java.lang.Integer.parseInt(Integer.java:615)
> at scala.collection.immutable.StringLike$class.toInt(StringLike.scala:272)
> at scala.collection.immutable.StringOps.toInt(StringOps.scala:29)
> at org.apache.spark.sql.execution.datasources.csv.CSVTypeCast$.castTo(CSVInferSchema.scala:244)
> Reason:
> The csv line is parsed into a Map (indexSafeTokens), which is short of one value. So indexSafeTokens(index) throws a NullpointerException reading the optional value which isn't in the Map.
> The NullpointerException is then given to the CSVTypeCast.castTo(datum: String, .....) as the datum value.
> The subsequent NumberFormatException is thrown due to the fact that a NullpointerException cannot be cast into the Type.
> Possible fix:
> - Use the provided schema to parse the line with the correct number of columns
> - Since its nullable implement a try catch on CSVRelation.csvParser indexSafeTokens(index)
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