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Posted to commits@hudi.apache.org by GitBox <gi...@apache.org> on 2022/10/20 10:22:12 UTC
[GitHub] [hudi] ChenShuai1981 opened a new issue, #7013: [SUPPORT] java.lang.NoSuchMethodError: org.apache.spark.serializer.KryoSerializer.newKryo()Lorg/apache/hudi/com/esotericsoftware/kryo/Kryo;
ChenShuai1981 opened a new issue, #7013:
URL: https://github.com/apache/hudi/issues/7013
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**Describe the problem you faced**
A clear and concise description of the problem.
**To Reproduce**
Steps to reproduce the behavior:
1. git clone hudi project
2. checkout master branch and build packages by executing 'mvn -Pscala-2.12 -Pspark3.3 -Pflink1.15 -Pflink-bundle-shade-hive3 clean install -DskipTests'
3. put packaging/hudi-spark-bundle/target/hudi-spark3.3-bundle_2.12-0.13.0-SNAPSHOT.jar into $SPARK_HOME/jars directory
4. config $SPARK_HOME/conf/spark-defaults.conf with the following configurations:
```
spark.sql.extensions org.apache.spark.sql.hudi.HoodieSparkSessionExtension
spark.sql.catalog.spark_catalog org.apache.spark.sql.hudi.catalog.HoodieCatalog
```
5. run spark-sql
6. prepare tables and data
```
create table hudi_mor_tbl (
id int,
name string,
price double,
ts bigint
) using hudi
tblproperties (
type = 'mor',
primaryKey = 'id',
preCombineField = 'ts'
);
insert into hudi_mor_tbl values (1000, 'Alice', 100, 1100);
update hudi_mor_tbl set price = price * 2, ts = 1111 where id = 1;
create table merge_source (id int, name string, price double, ts bigint) using hudi
tblproperties (primaryKey = 'id', preCombineField = 'ts');
insert into merge_source values (1, "old_a1", 22.22, 900), (2, "new_a2", 33.33, 2000), (3, "new_a3", 44.44, 2000);
```
7. execute `merge into` statement but met exception.
```
spark-sql (default)> merge into hudi_mor_tbl as target
> using merge_source as source
> on target.id = source.id
> when matched then update set *
> when not matched then insert *
> ;
22/10/20 17:50:51 WARN DFSPropertiesConfiguration: Cannot find HUDI_CONF_DIR, please set it as the dir of hudi-defaults.conf
22/10/20 17:50:51 WARN DFSPropertiesConfiguration: Properties file file:/etc/hudi/conf/hudi-defaults.conf not found. Ignoring to load props file
22/10/20 17:50:55 ERROR SparkSQLDriver: Failed in [merge into hudi_mor_tbl as target
using merge_source as source
on target.id = source.id
when matched then update set *
when not matched then insert *
]
java.lang.NoSuchMethodError: org.apache.spark.serializer.KryoSerializer.newKryo()Lorg/apache/hudi/com/esotericsoftware/kryo/Kryo;
at org.apache.spark.sql.hudi.SerDeUtils$$anon$1.initialValue(SerDeUtils.scala:34)
at org.apache.spark.sql.hudi.SerDeUtils$$anon$1.initialValue(SerDeUtils.scala:30)
at java.lang.ThreadLocal.setInitialValue(ThreadLocal.java:180)
at java.lang.ThreadLocal.get(ThreadLocal.java:170)
at org.apache.spark.sql.hudi.SerDeUtils$.toBytes(SerDeUtils.scala:42)
at org.apache.spark.sql.hudi.command.MergeIntoHoodieTableCommand.executeUpsert(MergeIntoHoodieTableCommand.scala:341)
at org.apache.spark.sql.hudi.command.MergeIntoHoodieTableCommand.run(MergeIntoHoodieTableCommand.scala:190)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult$lzycompute(commands.scala:75)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult(commands.scala:73)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.executeCollect(commands.scala:84)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$eagerlyExecuteCommands$1.$anonfun$applyOrElse$1(QueryExecution.scala:98)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$6(SQLExecution.scala:109)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:169)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$1(SQLExecution.scala:95)
at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:779)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:64)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$eagerlyExecuteCommands$1.applyOrElse(QueryExecution.scala:98)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$eagerlyExecuteCommands$1.applyOrElse(QueryExecution.scala:94)
at org.apache.spark.sql.catalyst.trees.TreeNode.$anonfun$transformDownWithPruning$1(TreeNode.scala:584)
at org.apache.spark.sql.catalyst.trees.CurrentOrigin$.withOrigin(TreeNode.scala:176)
at org.apache.spark.sql.catalyst.trees.TreeNode.transformDownWithPruning(TreeNode.scala:584)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.org$apache$spark$sql$catalyst$plans$logical$AnalysisHelper$$super$transformDownWithPruning(LogicalPlan.scala:30)
at org.apache.spark.sql.catalyst.plans.logical.AnalysisHelper.transformDownWithPruning(AnalysisHelper.scala:267)
at org.apache.spark.sql.catalyst.plans.logical.AnalysisHelper.transformDownWithPruning$(AnalysisHelper.scala:263)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.transformDownWithPruning(LogicalPlan.scala:30)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.transformDownWithPruning(LogicalPlan.scala:30)
at org.apache.spark.sql.catalyst.trees.TreeNode.transformDown(TreeNode.scala:560)
at org.apache.spark.sql.execution.QueryExecution.eagerlyExecuteCommands(QueryExecution.scala:94)
at org.apache.spark.sql.execution.QueryExecution.commandExecuted$lzycompute(QueryExecution.scala:81)
at org.apache.spark.sql.execution.QueryExecution.commandExecuted(QueryExecution.scala:79)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:220)
at org.apache.spark.sql.Dataset$.$anonfun$ofRows$2(Dataset.scala:100)
at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:779)
at org.apache.spark.sql.Dataset$.ofRows(Dataset.scala:97)
at org.apache.spark.sql.SparkSession.$anonfun$sql$1(SparkSession.scala:622)
at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:779)
at org.apache.spark.sql.SparkSession.sql(SparkSession.scala:617)
at org.apache.spark.sql.SQLContext.sql(SQLContext.scala:651)
at org.apache.spark.sql.hive.thriftserver.SparkSQLDriver.run(SparkSQLDriver.scala:67)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.processCmd(SparkSQLCLIDriver.scala:384)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.$anonfun$processLine$1(SparkSQLCLIDriver.scala:504)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.$anonfun$processLine$1$adapted(SparkSQLCLIDriver.scala:498)
at scala.collection.Iterator.foreach(Iterator.scala:943)
at scala.collection.Iterator.foreach$(Iterator.scala:943)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1431)
at scala.collection.IterableLike.foreach(IterableLike.scala:74)
at scala.collection.IterableLike.foreach$(IterableLike.scala:73)
at scala.collection.AbstractIterable.foreach(Iterable.scala:56)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.processLine(SparkSQLCLIDriver.scala:498)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver$.main(SparkSQLCLIDriver.scala:286)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.main(SparkSQLCLIDriver.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:958)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:180)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:203)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:90)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:1046)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:1055)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
java.lang.NoSuchMethodError: org.apache.spark.serializer.KryoSerializer.newKryo()Lorg/apache/hudi/com/esotericsoftware/kryo/Kryo;
at org.apache.spark.sql.hudi.SerDeUtils$$anon$1.initialValue(SerDeUtils.scala:34)
at org.apache.spark.sql.hudi.SerDeUtils$$anon$1.initialValue(SerDeUtils.scala:30)
at java.lang.ThreadLocal.setInitialValue(ThreadLocal.java:180)
at java.lang.ThreadLocal.get(ThreadLocal.java:170)
at org.apache.spark.sql.hudi.SerDeUtils$.toBytes(SerDeUtils.scala:42)
at org.apache.spark.sql.hudi.command.MergeIntoHoodieTableCommand.executeUpsert(MergeIntoHoodieTableCommand.scala:341)
at org.apache.spark.sql.hudi.command.MergeIntoHoodieTableCommand.run(MergeIntoHoodieTableCommand.scala:190)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult$lzycompute(commands.scala:75)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult(commands.scala:73)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.executeCollect(commands.scala:84)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$eagerlyExecuteCommands$1.$anonfun$applyOrElse$1(QueryExecution.scala:98)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$6(SQLExecution.scala:109)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:169)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$1(SQLExecution.scala:95)
at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:779)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:64)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$eagerlyExecuteCommands$1.applyOrElse(QueryExecution.scala:98)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$eagerlyExecuteCommands$1.applyOrElse(QueryExecution.scala:94)
at org.apache.spark.sql.catalyst.trees.TreeNode.$anonfun$transformDownWithPruning$1(TreeNode.scala:584)
at org.apache.spark.sql.catalyst.trees.CurrentOrigin$.withOrigin(TreeNode.scala:176)
at org.apache.spark.sql.catalyst.trees.TreeNode.transformDownWithPruning(TreeNode.scala:584)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.org$apache$spark$sql$catalyst$plans$logical$AnalysisHelper$$super$transformDownWithPruning(LogicalPlan.scala:30)
at org.apache.spark.sql.catalyst.plans.logical.AnalysisHelper.transformDownWithPruning(AnalysisHelper.scala:267)
at org.apache.spark.sql.catalyst.plans.logical.AnalysisHelper.transformDownWithPruning$(AnalysisHelper.scala:263)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.transformDownWithPruning(LogicalPlan.scala:30)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.transformDownWithPruning(LogicalPlan.scala:30)
at org.apache.spark.sql.catalyst.trees.TreeNode.transformDown(TreeNode.scala:560)
at org.apache.spark.sql.execution.QueryExecution.eagerlyExecuteCommands(QueryExecution.scala:94)
at org.apache.spark.sql.execution.QueryExecution.commandExecuted$lzycompute(QueryExecution.scala:81)
at org.apache.spark.sql.execution.QueryExecution.commandExecuted(QueryExecution.scala:79)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:220)
at org.apache.spark.sql.Dataset$.$anonfun$ofRows$2(Dataset.scala:100)
at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:779)
at org.apache.spark.sql.Dataset$.ofRows(Dataset.scala:97)
at org.apache.spark.sql.SparkSession.$anonfun$sql$1(SparkSession.scala:622)
at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:779)
at org.apache.spark.sql.SparkSession.sql(SparkSession.scala:617)
at org.apache.spark.sql.SQLContext.sql(SQLContext.scala:651)
at org.apache.spark.sql.hive.thriftserver.SparkSQLDriver.run(SparkSQLDriver.scala:67)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.processCmd(SparkSQLCLIDriver.scala:384)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.$anonfun$processLine$1(SparkSQLCLIDriver.scala:504)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.$anonfun$processLine$1$adapted(SparkSQLCLIDriver.scala:498)
at scala.collection.Iterator.foreach(Iterator.scala:943)
at scala.collection.Iterator.foreach$(Iterator.scala:943)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1431)
at scala.collection.IterableLike.foreach(IterableLike.scala:74)
at scala.collection.IterableLike.foreach$(IterableLike.scala:73)
at scala.collection.AbstractIterable.foreach(Iterable.scala:56)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.processLine(SparkSQLCLIDriver.scala:498)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver$.main(SparkSQLCLIDriver.scala:286)
at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.main(SparkSQLCLIDriver.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:958)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:180)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:203)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:90)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:1046)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:1055)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
```
**Expected behavior**
The `merge_source` table should be merge into `hudi_mor_tbl` table successfully.
**Environment Description**
* Hudi version : 0.13.0-SNAPSHOT
* Spark version : spark-3.3.0-bin-hadoop2
* Hive version : 3.1.2
* Hadoop version : 3.2.4
* Storage (HDFS/S3/GCS..) : HDFS
* Running on Docker? (yes/no) : no
**Additional context**
Add any other context about the problem here.
**Stacktrace**
```Add the stacktrace of the error.```
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[GitHub] [hudi] nsivabalan commented on issue #7013: [SUPPORT] java.lang.NoSuchMethodError: org.apache.spark.serializer.KryoSerializer.newKryo()Lorg/apache/hudi/com/esotericsoftware/kryo/Kryo;
Posted by GitBox <gi...@apache.org>.
nsivabalan commented on issue #7013:
URL: https://github.com/apache/hudi/issues/7013#issuecomment-1286484131
@xushiyan : you are fixing some kryo related bundling issue right. Is this related ?
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[GitHub] [hudi] xushiyan closed issue #7013: [SUPPORT] java.lang.NoSuchMethodError: org.apache.spark.serializer.KryoSerializer.newKryo()Lorg/apache/hudi/com/esotericsoftware/kryo/Kryo;
Posted by GitBox <gi...@apache.org>.
xushiyan closed issue #7013: [SUPPORT] java.lang.NoSuchMethodError: org.apache.spark.serializer.KryoSerializer.newKryo()Lorg/apache/hudi/com/esotericsoftware/kryo/Kryo;
URL: https://github.com/apache/hudi/issues/7013
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[GitHub] [hudi] xushiyan commented on issue #7013: [SUPPORT] java.lang.NoSuchMethodError: org.apache.spark.serializer.KryoSerializer.newKryo()Lorg/apache/hudi/com/esotericsoftware/kryo/Kryo;
Posted by GitBox <gi...@apache.org>.
xushiyan commented on issue #7013:
URL: https://github.com/apache/hudi/issues/7013#issuecomment-1286773805
exactly this will be fixed by https://github.com/apache/hudi/pull/7014
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