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Posted to dev@giraph.apache.org by "Jakob Homan (Created) (JIRA)" <ji...@apache.org> on 2011/11/14 22:08:52 UTC
[jira] [Created] (GIRAPH-81) Create annotations on provided
algorithms for cli
Create annotations on provided algorithms for cli
-------------------------------------------------
Key: GIRAPH-81
URL: https://issues.apache.org/jira/browse/GIRAPH-81
Project: Giraph
Issue Type: New Feature
Reporter: Jakob Homan
As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Assigned] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Maja Kabiljo (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Maja Kabiljo reassigned GIRAPH-81:
----------------------------------
Assignee: Maja Kabiljo
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Commented] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Avery Ching (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13414903#comment-13414903 ]
Avery Ching commented on GIRAPH-81:
-----------------------------------
I had a slight issue with this as
for f in `find $GIRAPH_HOME/target -name giraph\*.jar`
find $GIRAPH_HOME/target -name giraph\*.jar
returns
/Users/aching/Avery/source/giraph_trunk/target/giraph-0.2-SNAPSHOT-jar-with-dependencies.jar
/Users/aching/Avery/source/giraph_trunk/target/munged/giraph-0.2-SNAPSHOT-javadoc.jar
/Users/aching/Avery/source/giraph_trunk/target/munged/giraph-0.2-SNAPSHOT-sources.jar
/Users/aching/Avery/source/giraph_trunk/target/munged/giraph-0.2-SNAPSHOT-tests.jar
/Users/aching/Avery/source/giraph_trunk/target/munged/giraph-0.2-SNAPSHOT.jar
and I never get the correct output. The following below worked for me. Maja, did you need this?
-
- for f in `find $GIRAPH_HOME/target -name giraph\*.jar` ; do
+ for f in `find $GIRAPH_HOME/target -name giraph\*.jar | head -n 1` ; do
Everything else looks fine.
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81-2.patch, GIRAPH-81-3.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Commented] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Maja Kabiljo (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13403801#comment-13403801 ]
Maja Kabiljo commented on GIRAPH-81:
------------------------------------
Could you please try running it now? I managed to run jar from command line, but I haven't included all the dependencies correctly (I get NoClassDefFoundError for some external classes). Thanks
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Commented] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Hudson (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13415455#comment-13415455 ]
Hudson commented on GIRAPH-81:
------------------------------
Integrated in Giraph-trunk-Commit #144 (See [https://builds.apache.org/job/Giraph-trunk-Commit/144/])
GIRAPH-81: Create annotations on provided algorithms for cli
(majakabiljo via aching). (Revision 1362164)
Result = FAILURE
aching : http://svn.apache.org/viewcvs.cgi/?root=Apache-SVN&view=rev&rev=1362164
Files :
* /giraph/trunk/CHANGELOG
* /giraph/trunk/bin/giraph
* /giraph/trunk/src/main/java/org/apache/giraph/GiraphRunner.java
* /giraph/trunk/src/main/java/org/apache/giraph/examples/ConnectedComponentsVertex.java
* /giraph/trunk/src/main/java/org/apache/giraph/examples/SimplePageRankVertex.java
* /giraph/trunk/src/main/java/org/apache/giraph/examples/SimpleShortestPathsVertex.java
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81-2.patch, GIRAPH-81-3.patch, GIRAPH-81-4.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Commented] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Jakob Homan (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13402471#comment-13402471 ]
Jakob Homan commented on GIRAPH-81:
-----------------------------------
Looks good, but I'm getting an NPE when I try to run it:
{noformat}$ bin/giraph giraph-0.2-SNAPSHOT.jar -la
No HADOOP_CONF_DIR set, using /export/apps/hadoop/latest/conf
Exception in thread "main" java.lang.NullPointerException
at org.apache.giraph.utils.AnnotationUtils.addAll(AnnotationUtils.java:71)
at org.apache.giraph.utils.AnnotationUtils.getAnnotatedClasses(AnnotationUtils.java:55)
at org.apache.giraph.GiraphRunner.printSupportedAlgorithms(GiraphRunner.java:101)
at org.apache.giraph.GiraphRunner.run(GiraphRunner.java:132)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:65)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:79)
at org.apache.giraph.GiraphRunner.main(GiraphRunner.java:221)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.apache.hadoop.util.RunJar.main(RunJar.java:156)
{noformat}
Could this be related to GIRAPH-205?
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Attachments: GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Updated] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Maja Kabiljo (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Maja Kabiljo updated GIRAPH-81:
-------------------------------
Attachment: GIRAPH-81.patch
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Attachments: GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Updated] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Maja Kabiljo (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Maja Kabiljo updated GIRAPH-81:
-------------------------------
Attachment: GIRAPH-81-1.patch
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Updated] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Maja Kabiljo (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Maja Kabiljo updated GIRAPH-81:
-------------------------------
Attachment: GIRAPH-81-2.patch
No need to use FileUtils, it's even less complicated this way.
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81-2.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Commented] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Hudson (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13415473#comment-13415473 ]
Hudson commented on GIRAPH-81:
------------------------------
Integrated in Giraph-trunk-Commit #145 (See [https://builds.apache.org/job/Giraph-trunk-Commit/145/])
Forgot a few files from GIRAPH-81. (Revision 1362165)
Result = SUCCESS
aching : http://svn.apache.org/viewcvs.cgi/?root=Apache-SVN&view=rev&rev=1362165
Files :
* /giraph/trunk/src/main/java/org/apache/giraph/examples/Algorithm.java
* /giraph/trunk/src/main/java/org/apache/giraph/utils/AnnotationUtils.java
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81-2.patch, GIRAPH-81-3.patch, GIRAPH-81-4.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Commented] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Avery Ching (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13415453#comment-13415453 ]
Avery Ching commented on GIRAPH-81:
-----------------------------------
Thanks Gianmarco, that much cleaner. I'm going to commit Maja's change with your suggestion.
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81-2.patch, GIRAPH-81-3.patch, GIRAPH-81-4.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Resolved] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Avery Ching (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Avery Ching resolved GIRAPH-81.
-------------------------------
Resolution: Fixed
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81-2.patch, GIRAPH-81-3.patch, GIRAPH-81-4.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Commented] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Maja Kabiljo (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13403270#comment-13403270 ]
Maja Kabiljo commented on GIRAPH-81:
------------------------------------
I didn't try to run it from a jar, that's why it worked for me. For jar files we have no folders to traverse through. I've changed the code so it should cover both cases now. However, I can't test it since when I run jar like you did I get a message "Can't find Giraph jar.". Can you give me any pointers around it?
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Commented] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Gianmarco De Francisci Morales (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13415339#comment-13415339 ]
Gianmarco De Francisci Morales commented on GIRAPH-81:
------------------------------------------------------
Why do you need a find just to get the first result?
Can't you simply
{code}
for f in $GIRAPH_HOME/target/giraph*.jar ; do
{code}
You don't want to use the javadoc jar anyway, do you?
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81-2.patch, GIRAPH-81-3.patch, GIRAPH-81-4.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Commented] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Maja Kabiljo (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13402291#comment-13402291 ]
Maja Kabiljo commented on GIRAPH-81:
------------------------------------
Now it should be easy to add something similar for other things also - input and output formats, combiners, etc.
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Attachments: GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Updated] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Maja Kabiljo (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Maja Kabiljo updated GIRAPH-81:
-------------------------------
Attachment: GIRAPH-81-4.patch
Avery, I had the same problem, but I thought I didn't set something correctly. Changed that line in bin/giraph.
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81-2.patch, GIRAPH-81-3.patch, GIRAPH-81-4.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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[jira] [Updated] (GIRAPH-81) Create annotations on provided
algorithms for cli
Posted by "Maja Kabiljo (JIRA)" <ji...@apache.org>.
[ https://issues.apache.org/jira/browse/GIRAPH-81?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Maja Kabiljo updated GIRAPH-81:
-------------------------------
Attachment: GIRAPH-81-3.patch
> Create annotations on provided algorithms for cli
> -------------------------------------------------
>
> Key: GIRAPH-81
> URL: https://issues.apache.org/jira/browse/GIRAPH-81
> Project: Giraph
> Issue Type: New Feature
> Affects Versions: 0.2.0
> Reporter: Jakob Homan
> Assignee: Maja Kabiljo
> Fix For: 0.2.0
>
> Attachments: GIRAPH-81-1.patch, GIRAPH-81-2.patch, GIRAPH-81-3.patch, GIRAPH-81.patch
>
>
> As discussed in GIRAPH-64, it would be nice if the built-in algorithms that ship with Giraph were displayed from cli (ala Mahout) so that users can see what's available. Also, it was suggested that it would be good to use annotations for these to ease in documentation. This sounds like a good approach.
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