[jira] [Commented] (CTAKES-539) cTakes 4.0 installation error

["Ritika Maheshwari (Jira)" <ji...@apache.org>]

    [ https://issues.apache.org/jira/browse/CTAKES-539?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17611317#comment-17611317 ] 

Ritika Maheshwari commented on CTAKES-539:
------------------------------------------

Were you able to solve this issue. Getting same error with latest code from svn when I run the profile runCVD  with AggregatePlaintextFastUMLSProcessor.xml.

> cTakes 4.0 installation error
> -----------------------------
>
>                 Key: CTAKES-539
>                 URL: https://issues.apache.org/jira/browse/CTAKES-539
>             Project: cTAKES
>          Issue Type: Bug
>            Reporter: santanu barkakati
>            Priority: Major
>
> I am trying to follow the user installation guide, but got error in below step1 of 
> h3. CAS Visual Debugger (CVD)
> bin\runctakesCVD.bat  desc\ctakes-clinical-pipeline\desc\analysis_engine\AggregatePlaintextFastUMLSProcessor.xml
> Would appreciate some direction.
> *Below is the error from log file:*
> 12:03:17.219 - 1: org.apache.uima.tools.cvd.MainFrame.handleException(526): SEVERE: Initialization of annotator class "org.apache.ctakes.dictionary.lookup2.ae.DefaultJCasTermAnnotator" *{color:#FF0000}failed.{color}*  (Descriptor: file:/C:/Users/sbarkakati/cTakes/apache-ctakes-4.0.0/desc/ctakes-dictionary-lookup-fast/desc/analysis_engine/UmlsLookupAnnotator.xml)12:03:17.219 - 1: org.apache.uima.tools.cvd.MainFrame.handleException(526): SEVERE: Initialization of annotator class "org.apache.ctakes.dictionary.lookup2.ae.DefaultJCasTermAnnotator" failed.  (Descriptor: file:/C:/Users/sbarkakati/cTakes/apache-ctakes-4.0.0/desc/ctakes-dictionary-lookup-fast/desc/analysis_engine/UmlsLookupAnnotator.xml)org.apache.uima.resource.ResourceInitializationException: Initialization of annotator class "org.apache.ctakes.dictionary.lookup2.ae.DefaultJCasTermAnnotator" failed.  (Descriptor: file:/C:/Users/sbarkakati/cTakes/apache-ctakes-4.0.0/desc/ctakes-dictionary-lookup-fast/desc/analysis_engine/UmlsLookupAnnotator.xml) at org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:271) at org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initialize(PrimitiveAnalysisEngine_impl.java:170) at org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94) at org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62) at org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:279) at org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:407) at org.apache.uima.analysis_engine.asb.impl.ASB_impl.setup(ASB_impl.java:256) at org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initASB(AggregateAnalysisEngine_impl.java:429) at org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initializeAggregateAnalysisEngine(AggregateAnalysisEngine_impl.java:373) at org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initialize(AggregateAnalysisEngine_impl.java:186) at org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94) at org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62) at org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:279) at org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:371) at org.apache.uima.tools.cvd.MainFrame.setupAE(MainFrame.java:1484) at org.apache.uima.tools.cvd.MainFrame.loadAEDescriptor(MainFrame.java:476) at org.apache.uima.tools.cvd.CVD.main(CVD.java:164)Caused by: org.apache.uima.resource.ResourceInitializationException at org.apache.ctakes.dictionary.lookup2.ae.AbstractJCasTermAnnotator.initialize(AbstractJCasTermAnnotator.java:131) at org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:266) ... 16 moreCaused by: java.io.FileNotFoundException: No File exists at org/apache/ctakes/dictionary/lookup/fast/sno_rx_16ab.xml at org.apache.ctakes.core.resource.FileLocator.getFullPath(FileLocator.java:193) at org.apache.ctakes.core.resource.FileLocator.locateFile(FileLocator.java:99) at org.apache.ctakes.core.resource.FileLocator.getAsStream(FileLocator.java:73) at org.apache.ctakes.core.resource.FileLocator.getAsStream(FileLocator.java:53) at org.apache.ctakes.dictionary.lookup2.ae.AbstractJCasTermAnnotator.initialize(AbstractJCasTe
>  
> rmAnnotator.java:128) ... 17 more



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