You are viewing a plain text version of this content. The canonical link for it is here.
Posted to commits@taverna.apache.org by st...@apache.org on 2015/02/17 21:45:38 UTC

[07/51] [partial] incubator-taverna-workbench git commit: temporarily empty repository

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/folds/unfold.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/folds/unfold.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/folds/unfold.png
deleted file mode 100644
index 589e2c9..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/folds/unfold.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/folds/unfold_16x16.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/folds/unfold_16x16.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/folds/unfold_16x16.png
deleted file mode 100644
index dd2396c..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/folds/unfold_16x16.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/info-sphere-35.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/info-sphere-35.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/info-sphere-35.png
deleted file mode 100644
index cdbacd3..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/info-sphere-35.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/info-sphere-50.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/info-sphere-50.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/info-sphere-50.png
deleted file mode 100644
index 8e8ac21..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/info-sphere-50.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/open_in_BioCatalogue.pdn
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/open_in_BioCatalogue.pdn b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/open_in_BioCatalogue.pdn
deleted file mode 100644
index 3357714..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/open_in_BioCatalogue.pdn and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/open_in_BioCatalogue.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/open_in_BioCatalogue.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/open_in_BioCatalogue.png
deleted file mode 100644
index 897b2c1..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/open_in_BioCatalogue.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/pling-sphere-35.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/pling-sphere-35.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/pling-sphere-35.png
deleted file mode 100644
index 3326aad..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/pling-sphere-35.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/pling-sphere-50.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/pling-sphere-50.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/pling-sphere-50.png
deleted file mode 100644
index 1f47035..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/pling-sphere-50.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/query-sphere-35.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/query-sphere-35.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/query-sphere-35.png
deleted file mode 100644
index 8091ff3..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/query-sphere-35.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/query-sphere-50.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/query-sphere-50.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/query-sphere-50.png
deleted file mode 100644
index 443a868..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/query-sphere-50.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_multitype.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_multitype.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_multitype.png
deleted file mode 100644
index 1a8e9cf..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_multitype.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_rest.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_rest.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_rest.png
deleted file mode 100644
index a4276c2..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_rest.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_soap.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_soap.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_soap.png
deleted file mode 100644
index aa80209..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_soap.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_unknown.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_unknown.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_unknown.png
deleted file mode 100644
index 92638f1..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/service_type_unknown.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/soap_rest_multitype_unknown.pdn
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/soap_rest_multitype_unknown.pdn b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/soap_rest_multitype_unknown.pdn
deleted file mode 100644
index cc7fcb9..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/service_icons/soap_rest_multitype_unknown.pdn and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/styles.css
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/styles.css b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/styles.css
deleted file mode 100644
index 48bbdff..0000000
--- a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/styles.css
+++ /dev/null
@@ -1,290 +0,0 @@
-/* BEGIN service preview header styles */
-
-p.service_aka_names {
-  margin-top: 5px;
-  margin-bottom: 0;
-}
-
-span.service_aka_name {
-  font-weight: bold;
-  margin-right: 0.5em;
-}
-
-a.service_status_details {
-  text-decoration: none;
-}
-
-a.service_status_details:hover {
-  color: #ff7400;
-  text-decoration: underline;
-}
-
-h1.service_title {
-  border: 1px solid #D7EFA4;
-  background-color: #E9F7CC;
-  color: #000033;
-  text-align: center;
-  font-size: 180%;
-  margin: 0.2em 0 0 0;
-  padding: 0;
-}
-
-
-h2.soap_operation_name {
-  border: 1px solid #D7EFA4;
-  background-color: #E9F7CC;
-  color: #000033;
-  text-align: center;
-  font-size: 120%;
-  margin: 0.2em 0 0 0;
-  padding: 0;
-}
-
-h3.soap_operation_inputs_or_outputs_section {
-  background-color: #EEEEEE;
-  border: 1px solid #CCCCCC;
-  padding: 0.1em 0.6em;
-  font-size: 110%;
-  margin-top: 2em;
-}
-
-div.soap_input_or_output {
-  border: 1px solid #C6961D;
-  margin: 0.5em 1em;
-}
-
-div.soap_input_or_output p.name {
-  background-color: #FFC526;
-  border: 1px solid #C6961D;
-  padding: 0.2em 1em;
-  margin: 0;
-}
-
-div.soap_input_or_output p.body {
-  border: 1px solid #C6961D;
-  padding: 0.5em 1em;
-  margin: 0;
-}
-
-
-.orange_highlight {
- 	background-color: #ffbb7f;
-	padding: 1px 5px 1px 5px;
-  margin: 0 2px;
-}
-
-.none_text {
-  font-weight: normal;
-  font-style: italic;
-  color: #777777;
-}
-
-.left_indented {
-  margin-left: 2em;
-}
-
-/* END service preview header styles */
-
-
-/* BEGIN service preview annotation styles */
-
-div.annotation {
-  margin: 1em;
-  font-size: 100%;
-}
-
-div.annotation p.key {
-  margin: 0;
-  padding: 0;
-  font-weight: bold;
-}
-
-div.annotation p.value {
-  margin: 0;
-  padding: 0 0.7em;
-}
-
-div.annotation p.value_with_submitter {
-  margin: 0.4em 0;
-  padding: 0.3em 0.7em;
-  background-color: #AAFFC1;
-  border: 1px solid #91D8A4;
-}
-
-div.annotation p.value_with_submitter span.submitter{
-  float: right;
-  font-size: 80%;
-  margin: 0 0.2em 0 1em;
-  padding: 2px 5px 1px 5px;
-  background-color: #D8FFE2;
-}
-
-div.annotation img.link_icon {
-  padding: 0 3px;
-  vertical-align: middle;
-}
-
-div.annotation a {
-  vertical-align: middle;
-  color: #000000;
-}
-
-div.annotation a:link, a:visited  {
-  /*color: #333333;*/
-  text-decoration: underline;
-}
-
-div.annotation a:hover {
-  color: #ff7400;
-  text-decoration: underline;
-}
-
-div.annotation a:active {
-  color: #ff7400;
-  text-decoration: underline;
-}
-
-/* END service preview annotation styles */
-
-
-
-/* BEGIN service type styles */
-
-p.service_types {
-  margin-top: 0.5em;
-  margin-bottom: 0px;
-}
-
-a.service_type_badge {
-	font-size: 85%;
-	font-weight: bold;
-	background-color: #FFF;
-	border: 1px solid #DDD;
-	padding: 2px 3px;
-	text-decoration: none;
-	line-height: 1.0;
-}
-
-a.service_type_badge:hover {
-	color: #FFF;
-	background-color: #999;
-}
-
-/* END service type styles */
-
-
-/* BEGIN categories styles */
-
-.categories_box {
-	font-size: 90%;
-}
-
-ul.categories {
-	float: left;
-	overflow: hidden;
-	margin: 0;
-	padding: 0;
-	list-style-type: none;
-}
-
-ul.categories li {
-	display: inline;
-}
-
-ul.categories li span.title {
-  line-height: 1.6;
-  font-weight: bold;
-  margin-right: 0.7em;
-  vertical-align: middle;
-}
-
-ul.categories li span.main {
-	display:-moz-inline-block;
-	display:-moz-inline-box;
-	display: inline-block;
-	background-color: #FFC;
-	margin-bottom: 0.4em;
-	margin-right: 0.5em;
-	padding: 0;
-	border-top: 1px solid #DEDEDE;
-	border-left: 1px solid #DEDEDE;
-	border-right: 1px solid #999;
-	border-bottom: 1px solid #999;
-}
-
-ul.categories li span.main a.category {
-	line-height: 1.6;
-	text-decoration: none;
-	vertical-align: middle;
-  padding: 3px 5px 2px 5px;
-}
-
-ul.categories li span.main a.category:hover {
-	color: #000;
-  background-color: #F0E68C;
-}
-
-ul.categories li span.main:hover {
-	background-color: #F0E68C;
-}
-
-/* END categories styles */
-
-
-
-/* BEGIN tag cloud styles */
-
-div.tag_cloud a {
-  font-family:Arial,Helvetica,sans-serif;
-  color: #000099;        /* font color as on BioCatalogue */
-  margin: 0 10px;        /* vertical margin doesn't seem to work, so adding line-height to make sure that selection borders on different lines do not overlap */
-  line-height: 1.9em;
-  padding: 0 4px 2px 4px;
-  text-decoration: none;
-  
-  vertical-align: middle;
-}
-
-div.tag_cloud a:hover {
-  color: orange;
-}
-
-div.tag_cloud a.unselected {
-	/* 
-	 * this style is used to make sure that equal space
-	 * around anchor tags is taken by the transparent border
-	 * even when the tag is not "selected" 
-	 */
-	border-style: solid;
-	border-width: 2px;
-	border-color: transparent;
-}
-
-div.tag_cloud a.unselected_ontological_term {
-	/* 
-	 * this style is used to make sure that equal space
-	 * around anchor tags is taken by the transparent border
-	 * even when the tag is not "selected" 
-	 */
-	border-style: solid solid double solid;
-	border-width: 2px 2px 3px 2px;
-	border-color: transparent transparent #000099 transparent;
-}
-
-#ontological_term{
-    color:#3090C7	; /*Deep Sky Blue3*/
-}
-
-div.tag_cloud a.selected {
-	border-style: solid;
-	border-width: 2px;
-	background: #D6E9FF;
-}
-
-div.tag_cloud a.selected_ontological_term {
-	border-style: double double double double;
-	border-width: 3px 3px 3px 3px;
-	background: #D6E9FF;
-}
-
-/* END tag cloud styles */
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/test.html
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/test.html b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/test.html
deleted file mode 100644
index e23f24c..0000000
--- a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/test.html
+++ /dev/null
@@ -1,78 +0,0 @@
-<html>
-  <head>
-    <link href="styles.css" media="screen" rel="stylesheet" type="text/css" />
-  </head>
-  <body>
-    <h1 class="service_title">
-      Service:
-      <span class="orange_highlight">Blast</span>
-      <a class="service_type_badge" style="margin-left: 1.5em" href="">SOAP</a>
-    </h1>
-    <p class="left_indented service_aka_names"><span class="none_text">aka</span><span class="service_aka_name"> BLAST(DDBJ)</span></p>
-    
-    <div class="categories_box">
-      <ul class="categories">
-        <li>
-          <span class="title">
-            Categories:
-          </span>
-        </li>
-        <li>
-          <span class="main">
-            <a href="/services?cat=%5B18%5D" class="category">Nucleotide Sequence Similarity</a>
-          </span>
-        </li>
-        <li>
-          <span class="main">
-            <a href="/services?cat=%5B6%5D" class="category">Protein Sequence Similarity</a>
-          </span>
-        </li>
-      </ul>
-    </div>
-
-    <p style="border-top: 1px solid #000000; margin-top: 3em;"></p>
-    
-    <div class="annotation">
-      <p class="key">Provider</p>
-      <p class="value"><a href="">xml.nig.ac.jp</a></p>
-    </div>
-    
-    <div class="annotation">
-      <p class="key">Location</p>
-      <p class="value">Japan</p>
-    </div>
-    
-    <div class="annotation">
-      <p class="key">Submitter / Source</p>
-      <p class="value">
-        <img src="famfamfam_silk/user.png" class="link_icon"/>
-        <a href="">Franck</a>
-        <span class="none_text" style="margin-left: 0.7em; vertical-align: middle;">(2009-01-01)</span>
-      </p>
-    </div>
-    
-    <div class="annotation">
-      <p class="key">Endpoint</p>
-      <p class="value"><a href="">http://xml.nig.ac.jp/xddbj/Blast</a></p>
-    </div>
-    
-    <div class="annotation">
-      <p class="key">WSDL Location</p>
-      <p class="value"><a href="">http://xml.nig.ac.jp/xddbj/Blast.wsdl</a></p>
-    </div>
-    
-    <div class="annotation">
-      <p class="key">Documentation URL(s)</p>
-      <p class="value_with_submitter">
-        <span class="submitter">
-          <span style="vertical-align: middle;">by</span>
-          <img src="famfamfam_silk/remote_resource.png" class="link_icon"/>
-          <a href="">The EMBRACE Registry</a>
-          <span class="none_text" style="margin-left: 0.3em;">(2009-02-03)</span>
-        </span>
-        <a href="">http://xml.nig.ac.jp/index.html</a>
-      </p>
-    </div>
-    
-  </body>
-</html>
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tick-sphere-35.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tick-sphere-35.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tick-sphere-35.png
deleted file mode 100644
index 3593666..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tick-sphere-35.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tick-sphere-50.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tick-sphere-50.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tick-sphere-50.png
deleted file mode 100644
index f93f269..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tick-sphere-50.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/trash.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/trash.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/trash.png
deleted file mode 100644
index 80f5624..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/trash.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_checked.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_checked.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_checked.png
deleted file mode 100644
index af679a2..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_checked.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_partial.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_partial.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_partial.png
deleted file mode 100644
index 9a61aa4..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_partial.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_partial_green.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_partial_green.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_partial_green.png
deleted file mode 100644
index 9d1eeea..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_partial_green.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_unchecked.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_unchecked.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_unchecked.png
deleted file mode 100644
index d9b5c92..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/tristate_checkbox/tristate_checkbox_unchecked.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/unchecked.png
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/unchecked.png b/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/unchecked.png
deleted file mode 100644
index c131d07..0000000
Binary files a/taverna-workbench-perspective-biocatalogue/src/main/resources/net/sf/taverna/t2/ui/perspectives/biocatalogue/unchecked.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/xsd/dc.xsd
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/xsd/dc.xsd b/taverna-workbench-perspective-biocatalogue/src/main/xsd/dc.xsd
deleted file mode 100644
index 815d1a2..0000000
--- a/taverna-workbench-perspective-biocatalogue/src/main/xsd/dc.xsd
+++ /dev/null
@@ -1,119 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema"
-           xmlns="http://purl.org/dc/elements/1.1/"
-           targetNamespace="http://purl.org/dc/elements/1.1/"
-           elementFormDefault="qualified"
-           attributeFormDefault="unqualified">
-
-  <xs:annotation>
-    <xs:documentation xml:lang="en">
-      Simplified XML Schema for http://purl.org/dc/elements/1.1/
-
-      Created 2007-06-28
-
-      Created by
-
-      Stian Soiland (ssoiland@cs.man.ac.uk)
-
-      This simplification removes SimpleLiteral and specifies dc:any as
-      an xs:string, except for dc:date which is specified as an
-      xs:dateTime. This makes the schema more usable for tools like
-      XMLBeans.
-             
-
-
-      Based on
-      http://dublincore.org/schemas/xmls/qdc/2006/01/06/dc.xsd :
-
-    
-      DCMES 1.1 XML Schema
-      XML Schema for http://purl.org/dc/elements/1.1/ namespace
-
-      Created 2003-04-02
-
-      Created by 
-
-      Tim Cole (t-cole3@uiuc.edu)
-      Tom Habing (thabing@uiuc.edu)
-      Jane Hunter (jane@dstc.edu.au)
-      Pete Johnston (p.johnston@ukoln.ac.uk),
-      Carl Lagoze (lagoze@cs.cornell.edu)
-
-      This schema declares XML elements for the 15 DC elements from the
-      http://purl.org/dc/elements/1.1/ namespace.
-
-      It defines a complexType SimpleLiteral which permits mixed content 
-      and makes the xml:lang attribute available. It disallows child elements by
-      use of minOcccurs/maxOccurs.
-
-      However, this complexType does permit the derivation of other complexTypes
-      which would permit child elements.
-
-      All elements are declared as substitutable for the abstract element any, 
-      which means that the default type for all elements is dc:SimpleLiteral.
-
-    </xs:documentation>
-
-  </xs:annotation>
-
-
-  <xs:import namespace="http://www.w3.org/XML/1998/namespace"
-             schemaLocation="http://www.w3.org/2001/xml.xsd">
-
-  </xs:import>
-
-
-  <xs:element name="any" type="xs:string" abstract="true"/>
-
-  <xs:element name="title" substitutionGroup="any"/>
-  <xs:element name="creator" substitutionGroup="any"/>
-  <xs:element name="subject" substitutionGroup="any"/>
-  <xs:element name="description" substitutionGroup="any"/>
-  <xs:element name="publisher" substitutionGroup="any"/>
-
-  <xs:element name="contributor" substitutionGroup="any"/>
-  <xs:element name="date" type="xs:dateTime" />
-  <xs:element name="type" substitutionGroup="any"/>
-  <xs:element name="format" substitutionGroup="any"/>
-  <xs:element name="identifier" substitutionGroup="any"/>
-  <xs:element name="source" substitutionGroup="any"/>
-  <xs:element name="language" substitutionGroup="any"/>
-  <xs:element name="relation" substitutionGroup="any"/>
-  <xs:element name="coverage" substitutionGroup="any"/>
-
-  <xs:element name="rights" substitutionGroup="any"/>
-
-  <xs:group name="elementsGroup">
-  	<xs:annotation>
-    	<xs:documentation xml:lang="en">
-    	    This group is included as a convenience for schema authors
-            who need to refer to all the elements in the 
-            http://purl.org/dc/elements/1.1/ namespace.
-    	</xs:documentation>
-  	</xs:annotation>
-
-  <xs:sequence>
-
-    <xs:choice minOccurs="0" maxOccurs="unbounded">
-      <xs:element ref="any"/>
-    </xs:choice>
-    </xs:sequence>
-  </xs:group>
-
-  <xs:complexType name="elementContainer">
-  	<xs:annotation>
-    	<xs:documentation xml:lang="en">
-
-    		This complexType is included as a convenience for schema authors who need to define a root
-    		or container element for all of the DC elements.
-    	</xs:documentation>
-  	</xs:annotation>
-
-    <xs:choice>
-      <xs:group ref="elementsGroup"/>
-    </xs:choice>
-  </xs:complexType>
-
-
-</xs:schema>
-

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-perspective-biocatalogue/src/main/xsd/dcterms.xsd
----------------------------------------------------------------------
diff --git a/taverna-workbench-perspective-biocatalogue/src/main/xsd/dcterms.xsd b/taverna-workbench-perspective-biocatalogue/src/main/xsd/dcterms.xsd
deleted file mode 100644
index 205bf48..0000000
--- a/taverna-workbench-perspective-biocatalogue/src/main/xsd/dcterms.xsd
+++ /dev/null
@@ -1,137 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema"
-           xmlns:dc="http://purl.org/dc/elements/1.1/"
-           targetNamespace="http://purl.org/dc/terms/"
-           xmlns="http://purl.org/dc/terms/"
-           elementFormDefault="qualified"
-           attributeFormDefault="unqualified">
-
-  <xs:annotation>
-    <xs:documentation xml:lang="en">
-      Simplified XML Schema for http://purl.org/dc/terms/
-
-      Created 2007-06-28
-
-      Created by
-
-      Stian Soiland (ssoiland@cs.man.ac.uk)
-
-      This simplification removes SimpleLiteral references
-      so that it can be used with the simplified dc.xsd.
-      This makes the schema more usable for tools like
-      XMLBeans.
-
-
-      Based on
-      http://dublincore.org/schemas/xmls/qdc/2006/01/06/dcterms.xsd :
-
-
-      DCterms XML Schema
-      XML Schema for http://purl.org/dc/terms/ namespace
-
-      Created 2006-01-06
-
-      Created by 
-
-      Tim Cole (t-cole3@uiuc.edu)
-      Tom Habing (thabing@uiuc.edu)
-      Jane Hunter (jane@dstc.edu.au)
-      Pete Johnston (p.johnston@ukoln.ac.uk),
-      Carl Lagoze (lagoze@cs.cornell.edu)
-
-      This schema declares XML elements for the DC elements and
-      DC element refinements from the http://purl.org/dc/terms/ namespace.
-      
-      It reuses the complexType dc:SimpleLiteral, imported from the dc.xsd
-      schema, which permits simple element content, and makes the xml:lang
-      attribute available.
-
-      This complexType permits the derivation of other complexTypes
-      which would permit child elements.
-
-      DC elements are declared as substitutable for the abstract element dc:any, and 
-      DC element refinements are defined as substitutable for the base elements 
-      which they refine.
-
-      This means that the default type for all XML elements (i.e. all DC elements and 
-      element refinements) is dc:SimpleLiteral.
-
-      Encoding schemes are defined as complexTypes which are restrictions
-      of the dc:SimpleLiteral complexType. These complexTypes restrict 
-      values to an appropriates syntax or format using data typing,
-      regular expressions, or enumerated lists.
-  
-      In order to specify one of these encodings an xsi:type attribute must 
-      be used in the instance document.
-
-      Also, note that one shortcoming of this approach is that any type can be 
-      applied to any of the elements or refinements.  There is no convenient way
-      to restrict types to specific elements using this approach.
-
-    </xs:documentation>
-
-  </xs:annotation>
-
-
-  <xs:import namespace="http://www.w3.org/XML/1998/namespace"
-             schemaLocation="http://www.w3.org/2001/xml.xsd">
-
-  </xs:import>
-
-   <xs:import namespace="http://purl.org/dc/elements/1.1/"
-              schemaLocation="dc.xsd"/>
-
-   <xs:element name="alternative" substitutionGroup="dc:title"/>
-
-   <xs:element name="tableOfContents" substitutionGroup="dc:description"/>
-   <xs:element name="abstract" substitutionGroup="dc:description"/>
-
-   <xs:element name="created" substitutionGroup="dc:date"/>
-   <xs:element name="valid" substitutionGroup="dc:date"/>
-
-   <xs:element name="available" substitutionGroup="dc:date"/>
-   <xs:element name="issued" substitutionGroup="dc:date"/>
-   <xs:element name="modified" substitutionGroup="dc:date"/>
-   <xs:element name="dateAccepted" substitutionGroup="dc:date"/>
-   <xs:element name="dateCopyrighted" substitutionGroup="dc:date"/>
-   <xs:element name="dateSubmitted" substitutionGroup="dc:date"/>
-
-   <xs:element name="extent" substitutionGroup="dc:format"/>
-   <xs:element name="medium" substitutionGroup="dc:format"/>
-
-   <xs:element name="isVersionOf" substitutionGroup="dc:relation"/>
-   <xs:element name="hasVersion" substitutionGroup="dc:relation"/>
-   <xs:element name="isReplacedBy" substitutionGroup="dc:relation"/>
-   <xs:element name="replaces" substitutionGroup="dc:relation"/>
-   <xs:element name="isRequiredBy" substitutionGroup="dc:relation"/>
-   <xs:element name="requires" substitutionGroup="dc:relation"/>
-   <xs:element name="isPartOf" substitutionGroup="dc:relation"/>
-   <xs:element name="hasPart" substitutionGroup="dc:relation"/>
-
-   <xs:element name="isReferencedBy" substitutionGroup="dc:relation"/>
-   <xs:element name="references" substitutionGroup="dc:relation"/>
-   <xs:element name="isFormatOf" substitutionGroup="dc:relation"/>
-   <xs:element name="hasFormat" substitutionGroup="dc:relation"/>
-   <xs:element name="conformsTo" substitutionGroup="dc:relation"/>
-
-   <xs:element name="spatial" substitutionGroup="dc:coverage"/>
-   <xs:element name="temporal" substitutionGroup="dc:coverage"/>
-
-   <xs:element name="audience" substitutionGroup="dc:any"/>
-
-   <xs:element name="accrualMethod" substitutionGroup="dc:any"/>
-   <xs:element name="accrualPeriodicity" substitutionGroup="dc:any"/>
-   <xs:element name="accrualPolicy" substitutionGroup="dc:any"/>
-   <xs:element name="instructionalMethod" substitutionGroup="dc:any"/>
-   <xs:element name="provenance" substitutionGroup="dc:any"/>
-   <xs:element name="rightsHolder" substitutionGroup="dc:any"/>
-
-   <xs:element name="mediator" substitutionGroup="audience"/>
-   <xs:element name="educationLevel" substitutionGroup="audience"/>
-
-   <xs:element name="accessRights" substitutionGroup="dc:rights"/>
-   <xs:element name="license" substitutionGroup="dc:rights"/>
-
-   <xs:element name="bibliographicCitation" substitutionGroup="dc:identifier"/>
-
-</xs:schema>