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Posted to reviews@spark.apache.org by GitBox <gi...@apache.org> on 2019/12/23 02:25:47 UTC
[GitHub] [spark] zhengruifeng commented on a change in pull request #26948:
[SPARK-30120][ML] LSH approxNearestNeighbors should use
BoundedPriorityQueue when numNearestNeighbors is small
zhengruifeng commented on a change in pull request #26948: [SPARK-30120][ML] LSH approxNearestNeighbors should use BoundedPriorityQueue when numNearestNeighbors is small
URL: https://github.com/apache/spark/pull/26948#discussion_r360749012
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File path: mllib/src/main/scala/org/apache/spark/ml/feature/LSH.scala
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@@ -138,21 +137,37 @@ private[ml] abstract class LSHModel[T <: LSHModel[T]]
// Limit the use of hashDist since it's controversial
val hashDistUDF = udf((x: Seq[Vector]) => hashDistance(x, keyHash), DataTypes.DoubleType)
val hashDistCol = hashDistUDF(col($(outputCol)))
-
- // Compute threshold to get around k elements.
- // To guarantee to have enough neighbors in one pass, we need (p - err) * N >= M
- // so we pick quantile p = M / N + err
- // M: the number of nearest neighbors; N: the number of elements in dataset
- val relativeError = 0.05
- val approxQuantile = numNearestNeighbors.toDouble / count + relativeError
val modelDatasetWithDist = modelDataset.withColumn(distCol, hashDistCol)
- if (approxQuantile >= 1) {
- modelDatasetWithDist
+
+ if (numNearestNeighbors < 1000) {
Review comment:
I set a threshold=1,000 here, just to avoid OOM. maybe 10,000 also works.
The aggregation cost of both `BoundedPriorityQueue` and `approxNearestNeighbors` should be quite similar.
But `BoundedPriorityQueue` do not need an extra pass to get `count` for `val approxQuantile = numNearestNeighbors.toDouble / count + relativeError`
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