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Posted to builds@beam.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2019/01/25 19:41:18 UTC
Build failed in Jenkins: beam_PostCommit_Python_Verify #7196
See <https://builds.apache.org/job/beam_PostCommit_Python_Verify/7196/display/redirect?page=changes>
Changes:
[scott] Add additional debug output for metrics prober test failures
[scott] Add a bit more details to the CONTRIBUTING stub
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[...truncated 115.12 KB...]
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Requirement already satisfied: setuptools in <https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/build/gradleenv/1327086738/lib/python2.7/site-packages> (from protobuf<4,>=3.5.0.post1->apache-beam==2.11.0.dev0) (40.6.3)
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Installing collected packages: crcmod, dill, fastavro, docopt, certifi, chardet, idna, urllib3, requests, hdfs, httplib2, pbr, funcsigs, mock, pyasn1, pyasn1-modules, rsa, oauth2client, pyparsing, pydot, pytz, pyvcf, pyyaml, avro, typing, numpy, pyarrow, monotonic, fasteners, google-apitools, googleapis-common-protos, proto-google-cloud-datastore-v1, cachetools, google-auth, google-api-core, grpc-google-iam-v1, google-cloud-pubsub, google-cloud-core, google-resumable-media, google-cloud-bigquery, googledatastore, nose, python-dateutil, pandas, parameterized, pyhamcrest, tenacity, apache-beam
Running setup.py develop for apache-beam
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> Task :beam-sdks-python:directRunnerIT
###########################################################################
# Build pipeline options if not provided in --pipeline_opts from commandline
if [[ -z $PIPELINE_OPTS ]]; then
# Check that the script is running in a known directory.
if [[ $PWD != *sdks/python* ]]; then
echo 'Unable to locate Apache Beam Python SDK root directory'
exit 1
fi
# Go to the Apache Beam Python SDK root
if [[ "*sdks/python" != $PWD ]]; then
cd $(pwd | sed 's/sdks\/python.*/sdks\/python/')
fi
# Create a tarball if not exists
if [[ $(find ${SDK_LOCATION}) ]]; then
SDK_LOCATION=$(find ${SDK_LOCATION})
else
python setup.py -q sdist
SDK_LOCATION=$(find dist/apache-beam-*.tar.gz)
fi
# Install test dependencies for ValidatesRunner tests.
echo "pyhamcrest" > postcommit_requirements.txt
echo "mock" >> postcommit_requirements.txt
# Options used to run testing pipeline on Cloud Dataflow Service. Also used for
# running on DirectRunner (some options ignored).
opts=(
"--runner=$RUNNER"
"--project=$PROJECT"
"--staging_location=$GCS_LOCATION/staging-it"
"--temp_location=$GCS_LOCATION/temp-it"
"--output=$GCS_LOCATION/py-it-cloud/output"
"--sdk_location=$SDK_LOCATION"
"--requirements_file=postcommit_requirements.txt"
"--num_workers=$NUM_WORKERS"
"--sleep_secs=$SLEEP_SECS"
)
# Add --streaming if provided
if [[ "$STREAMING" = true ]]; then
opts+=("--streaming")
fi
# Add --dataflow_worker_jar if provided
if [[ ! -z "$WORKER_JAR" ]]; then
opts+=("--dataflow_worker_jar=$WORKER_JAR")
fi
if [[ ! -z "$KMS_KEY_NAME" ]]; then
opts+=("--kms_key_name=$KMS_KEY_NAME")
fi
PIPELINE_OPTS=$(IFS=" " ; echo "${opts[*]}")
fi
pwd | sed 's/sdks\/python.*/sdks\/python/'
find ${SDK_LOCATION}
find ${SDK_LOCATION}
IFS=" " ; echo "${opts[*]}"
###########################################################################
# Run tests and validate that jobs finish successfully.
>>> RUNNING integration tests with pipeline options: --runner=TestDirectRunner --project=apache-beam-testing --staging_location=gs://temp-storage-for-end-to-end-tests/staging-it --temp_location=gs://temp-storage-for-end-to-end-tests/temp-it --output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output --sdk_location=build/apache-beam.tar.gz --requirements_file=postcommit_requirements.txt --num_workers=1 --sleep_secs=20 --kms_key_name=projects/apache-beam-testing/locations/global/keyRings/beam-it/cryptoKeys/test/cryptoKeyVersions/1
echo ">>> RUNNING integration tests with pipeline options: $PIPELINE_OPTS"
python setup.py nosetests \
--test-pipeline-options="$PIPELINE_OPTS" \
$TEST_OPTS
<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/build/gradleenv/1327086738/local/lib/python2.7/site-packages/setuptools/dist.py>:470: UserWarning: Normalizing '2.11.0.dev' to '2.11.0.dev0'
normalized_version,
running nosetests
running egg_info
writing requirements to apache_beam.egg-info/requires.txt
writing apache_beam.egg-info/PKG-INFO
writing top-level names to apache_beam.egg-info/top_level.txt
writing dependency_links to apache_beam.egg-info/dependency_links.txt
writing entry points to apache_beam.egg-info/entry_points.txt
reading manifest file 'apache_beam.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'README.md'
warning: no files found matching 'NOTICE'
warning: no files found matching 'LICENSE'
writing manifest file 'apache_beam.egg-info/SOURCES.txt'
Traceback (most recent call last):
File "src/python/grpcio/grpc/_cython/_cygrpc/credentials.pyx.pxi", line 33, in grpc._cython.cygrpc._spawn_callback_async
File "src/python/grpcio/grpc/_cython/_cygrpc/credentials.pyx.pxi", line 24, in grpc._cython.cygrpc._spawn_callback_in_thread
File "src/python/grpcio/grpc/_cython/_cygrpc/fork_posix.pyx.pxi", line 107, in grpc._cython.cygrpc.ForkManagedThread.start
File "/usr/lib/python2.7/threading.py", line 736, in start
_start_new_thread(self.__bootstrap, ())
thread.error: can't start new thread
Exception thread.error: error("can't start new thread",) in 'grpc._cython.cygrpc._get_metadata' ignored
test_bigquery_read_1M_python (apache_beam.io.gcp.bigquery_io_read_it_test.BigqueryIOReadIT) ... ERROR
test_wordcount_it (apache_beam.examples.wordcount_it_test.WordCountIT) ... ERROR
test_big_query_legacy_sql (apache_beam.io.gcp.big_query_query_to_table_it_test.BigQueryQueryToTableIT) ... ERROR
test_big_query_new_types (apache_beam.io.gcp.big_query_query_to_table_it_test.BigQueryQueryToTableIT) ... ERROR
test_big_query_standard_sql (apache_beam.io.gcp.big_query_query_to_table_it_test.BigQueryQueryToTableIT) ... ERROR
test_streaming_data_only (apache_beam.io.gcp.pubsub_integration_test.PubSubIntegrationTest) ... ok
test_streaming_with_attributes (apache_beam.io.gcp.pubsub_integration_test.PubSubIntegrationTest) ... ok
======================================================================
ERROR: test_bigquery_read_1M_python (apache_beam.io.gcp.bigquery_io_read_it_test.BigqueryIOReadIT)
----------------------------------------------------------------------
Traceback (most recent call last):
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/io/gcp/bigquery_io_read_it_test.py",> line 58, in test_bigquery_read_1M_python
self.run_bigquery_io_read_pipeline('1M')
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/io/gcp/bigquery_io_read_it_test.py",> line 54, in run_bigquery_io_read_pipeline
**extra_opts))
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/io/gcp/bigquery_io_read_pipeline.py",> line 74, in run
p.run()
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/testing/test_pipeline.py",> line 107, in run
else test_runner_api))
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/pipeline.py",> line 405, in run
self._options).run(False)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/pipeline.py",> line 418, in run
return self.runner.run_pipeline(self, self._options)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/direct/test_direct_runner.py",> line 43, in run_pipeline
self.result = super(TestDirectRunner, self).run_pipeline(pipeline, options)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/direct/direct_runner.py",> line 136, in run_pipeline
return runner.run_pipeline(pipeline, options)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/direct/direct_runner.py",> line 398, in run_pipeline
evaluation_context)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/direct/executor.py",> line 394, in __init__
self._executor = _ExecutorServiceParallelExecutor(*args, **kwargs)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/direct/executor.py",> line 414, in __init__
_ExecutorServiceParallelExecutor.NUM_WORKERS)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/direct/executor.py",> line 108, in __init__
self.queue, i) for i in range(num_workers)]
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/direct/executor.py",> line 69, in __init__
self.start()
File "/usr/lib/python2.7/threading.py", line 736, in start
_start_new_thread(self.__bootstrap, ())
error: can't start new thread
-------------------- >> begin captured logging << --------------------
root: INFO: Running pipeline with DirectRunner.
--------------------- >> end captured logging << ---------------------
======================================================================
ERROR: test_wordcount_it (apache_beam.examples.wordcount_it_test.WordCountIT)
----------------------------------------------------------------------
Traceback (most recent call last):
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/examples/wordcount_it_test.py",> line 47, in test_wordcount_it
self._run_wordcount_it()
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/examples/wordcount_it_test.py",> line 75, in _run_wordcount_it
wordcount.run(test_pipeline.get_full_options_as_args(**extra_opts))
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/examples/wordcount.py",> line 115, in run
result = p.run()
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/pipeline.py",> line 405, in run
self._options).run(False)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/pipeline.py",> line 418, in run
return self.runner.run_pipeline(self, self._options)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/direct/test_direct_runner.py",> line 43, in run_pipeline
self.result = super(TestDirectRunner, self).run_pipeline(pipeline, options)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/direct/direct_runner.py",> line 136, in run_pipeline
return runner.run_pipeline(pipeline, options)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/portability/fn_api_runner.py",> line 274, in run_pipeline
default_environment=self._default_environment))
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/portability/fn_api_runner.py",> line 277, in run_via_runner_api
return self.run_stages(*self.create_stages(pipeline_proto))
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/portability/fn_api_runner.py",> line 364, in run_stages
safe_coders)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/portability/fn_api_runner.py",> line 510, in run_stage
self._progress_frequency).process_bundle(data_input, data_output)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/portability/fn_api_runner.py",> line 1107, in process_bundle
result_future = self._controller.control_handler.push(process_bundle)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/portability/fn_api_runner.py",> line 760, in push
response = self.worker.do_instruction(request)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/worker/sdk_worker.py",> line 259, in do_instruction
request.instruction_id)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/worker/sdk_worker.py",> line 275, in process_bundle
bundle_processor.process_bundle(instruction_id)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/worker/bundle_processor.py",> line 496, in process_bundle
].process_encoded(data.data)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/worker/bundle_processor.py",> line 126, in process_encoded
self.output(decoded_value)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/worker/operations.py",> line 183, in output
cython.cast(Receiver, self.receivers[output_index]).receive(windowed_value)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/worker/operations.py",> line 89, in receive
cython.cast(Operation, consumer).process(windowed_value)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/worker/operations.py",> line 498, in process
self.dofn_receiver.receive(o)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/common.py",> line 678, in receive
self.process(windowed_value)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/common.py",> line 684, in process
self._reraise_augmented(exn)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/common.py",> line 682, in process
self.do_fn_invoker.invoke_process(windowed_value)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/common.py",> line 419, in invoke_process
windowed_value, self.process_method(windowed_value.value))
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/common.py",> line 792, in process_outputs
self.main_receivers.receive(windowed_value)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/worker/operations.py",> line 89, in receive
cython.cast(Operation, consumer).process(windowed_value)
File "<https://builds.apache.org/job/beam_PostCommit_Python_Verify/ws/src/sdks/python/apache_beam/runners/worker/operations.py",> line 498, in process
self.dofn_receiver.receive(o)
Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure
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