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Posted to issues@mxnet.apache.org by GitBox <gi...@apache.org> on 2021/02/02 14:58:43 UTC
[GitHub] [incubator-mxnet] vycezhong opened a new issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
vycezhong opened a new issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575
I encountered an compilation error showing that <mkldnn.h> is not found when I tried to compile BytePS with mxnet-cu102==1.7.0. I checked the mxnet package and indeed there is no MKLDNN header.
However, interestingly I found that it supports MKLDNN. And later I found MKLDNN is enabled by default in 1.7.0. https://github.com/apache/incubator-mxnet/pull/16899
So I suggest including the headers in the pip package.
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[GitHub] [incubator-mxnet] vycezhong commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
vycezhong commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-732308605
> Please try using: https://repo.mxnet.io/dist/python/cu102/mxnet_cu102-1.7.0b20200813-py2.py3-none-manylinux2014_x86_64.whl. I believe it has all necessary headers.
Thanks for your help.
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[GitHub] [incubator-mxnet] EnricoMi edited a comment on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
EnricoMi edited a comment on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-767453931
Is there an ETA on releasing v1.7.1 or v1.7.0.post1 for cu101 and cu102?
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[GitHub] [incubator-mxnet] szha commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-774762182
@EnricoMi our 1.8.0 release is in the pipeline so I think it's more likely to have cu110 release for that.
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[GitHub] [incubator-mxnet] bartekkuncer commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
bartekkuncer commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-733618874
> > Please try using: https://repo.mxnet.io/dist/python/cu102/mxnet_cu102-1.7.0b20200813-py2.py3-none-manylinux2014_x86_64.whl. I believe it has all necessary headers.
>
> Thanks for your help.
@vycezhong I understand that the package I proposed works for you? :)
@szha @leezu Should we release patch v1.7.1 which will fix the lacking headers or just wait for official minor v1.8.0 release?
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[GitHub] [incubator-mxnet] bartekkuncer edited a comment on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
bartekkuncer edited a comment on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-732135567
Hi @vycezhong,
I saw that there was simillar issue in the past: https://github.com/apache/incubator-mxnet/issues/18120, which has been fixed here: https://github.com/apache/incubator-mxnet/pull/18310 and https://github.com/apache/incubator-mxnet/pull/18355. I will check why this issue is occurring again.
Thanks for reporting.
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[GitHub] [incubator-mxnet] bartekkuncer edited a comment on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
bartekkuncer edited a comment on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-734227238
> @bartekkuncer I think we should. At least it should be fixed with a post-release
@szha Ok, I will look into it. What is the post-release flow?
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[GitHub] [incubator-mxnet] EnricoMi commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
EnricoMi commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-776611647
@szha that post2 version for CPU works for Horovod, thanks!
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[GitHub] [incubator-mxnet] szha commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-771187700
Patched wheels are now available:
https://pypi.org/project/mxnet-cu101/#files
https://pypi.org/project/mxnet-cu102/#files
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[GitHub] [incubator-mxnet] EnricoMi commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
EnricoMi commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-767453931
Is there an ETA on releasing v1.7.1 or v1.7.0.post0 for cu101 and cu102?
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[GitHub] [incubator-mxnet] szha closed issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha closed issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575
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[GitHub] [incubator-mxnet] bartekkuncer commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
bartekkuncer commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-734227238
> @bartekkuncer I think we should. At least it should be fixed with a post-release
@szha Ok, I will look into it.
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[GitHub] [incubator-mxnet] leezu commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
leezu commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-771693825
It's a bug in the post0. I'm reopening the issue
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[GitHub] [incubator-mxnet] szha commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-733778835
@bartekkuncer I think we should.
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[GitHub] [incubator-mxnet] szha commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-767596700
Thanks for the ping. We resolved the license issue and I can get to it this week.
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[GitHub] [incubator-mxnet] EnricoMi commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
EnricoMi commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-771558273
@szha thanks for the cu101 and cu102 releases, is a release with MKLDNN headers planned for [mxnet](https://pypi.org/project/mxnet/#history) as well? Version [mxnet-1.7.0.post1](https://buildkite.com/horovod/horovod/builds/4830#2c48d5bf-2ea7-4d03-988c-683777dab40c/6-4313) does not include headers.
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[GitHub] [incubator-mxnet] bartekkuncer commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
bartekkuncer commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-732265558
Please try using: https://repo.mxnet.io/dist/python/cu102/mxnet_cu102-1.7.0b20200813-py2.py3-none-manylinux2014_x86_64.whl. I believe it has all necessary headers.
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[GitHub] [incubator-mxnet] EnricoMi commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
EnricoMi commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-771564248
With `mxnet-cu101==1.7.0.post0`, I get the following error:
```
In file included from /usr/local/lib/python3.8/dist-packages/mxnet/include/mkldnn/mkldnn.hpp:24:0,
from /usr/local/lib/python3.8/dist-packages/mxnet/include/mxnet/ndarray.h:41,
from /tmp/pip-req-build-n16mfgkd/horovod/mxnet/mpi_ops.h:24,
from /tmp/pip-req-build-n16mfgkd/horovod/mxnet/mpi_ops.cc:21:
/usr/local/lib/python3.8/dist-packages/mxnet/include/mkldnn/dnnl.hpp:23:10: fatal error: dnnl_config.h: No such file or directory
```
With `mxnet-cu101==1.7.0b20200813`, everything worked fine. Are there any changes between those two versions that I have to incorporate?
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[GitHub] [incubator-mxnet] szha closed issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha closed issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575
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[GitHub] [incubator-mxnet] szha commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-774320505
Sorry, the two dnnl_* files were missed in post0. I posted 1.7.0.post1 to cu101/cu102 wheels which should include the necessary mkldnn headers (thanks @leezu for verifying). Let me look into including the headers for the CPU versions.
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[GitHub] [incubator-mxnet] szha commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-734410878
@bartekkuncer it's just about repackaging and releasing on PyPI as another version. Since there is some ongoing license issue that needs to be sorted out first, we are putting changes to PyPI changes on hold. Will revisit once the issue is resolved.
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[GitHub] [incubator-mxnet] bartekkuncer commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
bartekkuncer commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-732135567
Hi @vycezhong,
I saw that there was simillar issue in the past: https://github.com/apache/incubator-mxnet/issues/18120, which has been fixed here: https://github.com/apache/incubator-mxnet/pull/18355. I will check why this issue is occurring again.
Thanks for reporting.
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[GitHub] [incubator-mxnet] leezu commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
leezu commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-771693825
It's a bug in the post0. I'm reopening the issue
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[GitHub] [incubator-mxnet] bartekkuncer commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
bartekkuncer commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-767454914
> Is there an ETA on releasing v1.7.1 or v1.7.0.post1 for cu101 and cu102?
@szha
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[GitHub] [incubator-mxnet] szha edited a comment on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha edited a comment on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-733778835
@bartekkuncer I think we should. At least it should be fixed with a post-release
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[GitHub] [incubator-mxnet] EnricoMi commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
EnricoMi commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-771558273
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[GitHub] [incubator-mxnet] szha commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
szha commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-774770316
I uploaded the post2 versions of the CPU wheels to include mkldnn headers.
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[GitHub] [incubator-mxnet] vycezhong commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
vycezhong commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-733645785
Yes it works for me. Thanks.
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[GitHub] [incubator-mxnet] bartekkuncer commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
bartekkuncer commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-732195747
I have checked that the fix has been applied to branch v1.7.x but not to the tag 1.7.0 which apparently is used to build the pip package.
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[GitHub] [incubator-mxnet] EnricoMi commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
EnricoMi commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-774459287
I can confirm 1.7.0.post1 for cu101 works for Horovod. Is a release of 1.7.0.post1 for cu110 also planned for the near future?
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[GitHub] [incubator-mxnet] EnricoMi commented on issue #19575: MKLDNN header missing in mxnet-cu102==1.7.0 pip package
Posted by GitBox <gi...@apache.org>.
EnricoMi commented on issue #19575:
URL: https://github.com/apache/incubator-mxnet/issues/19575#issuecomment-767677862
Awesome, thanks for picking it up!
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