You are viewing a plain text version of this content. The canonical link for it is here.
Posted to commits@taverna.apache.org by st...@apache.org on 2015/02/17 21:49:43 UTC

[16/16] incubator-taverna-workbench-common-activities git commit: Temporarily empty repository

Temporarily empty repository

.. as Software Grant is not formally on file yet


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/commit/b4725724
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/tree/b4725724
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/diff/b4725724

Branch: refs/heads/master
Commit: b4725724cecebe7fff940832c4cbaa4ed62dd621
Parents: c64d5ce
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Tue Feb 17 20:49:07 2015 +0000
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Tue Feb 17 20:49:07 2015 +0000

----------------------------------------------------------------------
 pom.xml                                         |   42 -
 taverna-beanshell-activity-ui/pom.xml           |  100 -
 .../BeanshellActivityConfigurationAction.java   |   71 -
 .../menu/AddBeanshellTemplateAction.java        |  113 --
 .../menu/AddBeanshellTemplateMenuAction.java    |  121 --
 .../menu/ConfigureBeanshellMenuAction.java      |   67 -
 .../BeanshellActivityIcon.java                  |   58 -
 .../BeanshellTemplateService.java               |   57 -
 .../views/BeanshellActivityViewFactory.java     |   84 -
 .../views/BeanshellConfigurationPanel.java      |  231 ---
 .../views/BeanshellContextualView.java          |  104 -
 ...rvicedescriptions.ServiceDescriptionProvider |    1 -
 .../net.sf.taverna.t2.ui.menu.MenuComponent     |    3 -
 ...a.t2.workbench.activityicons.ActivityIconSPI |    1 -
 ...ntextualviews.activity.ContextualViewFactory |    1 -
 .../beanshell-activity-ui-context-osgi.xml      |   29 -
 .../spring/beanshell-activity-ui-context.xml    |   43 -
 .../src/main/resources/beanshell.png            |  Bin 1015 -> 0 bytes
 .../t2/activities/beanshell/views/keys.txt      |   90 -
 taverna-external-tool-activity-ui/pom.xml       |  108 -
 .../ExternalToolActivityConfigureAction.java    |   83 -
 .../ToolInvocationConfiguration.java            |   57 -
 .../externaltool/manager/GroupPanel.java        |  113 --
 .../InvocationGroupManagerShutdownHook.java     |   34 -
 .../InvocationGroupManagerStartupHook.java      |   47 -
 .../manager/InvocationMechanismEditor.java      |   28 -
 .../externaltool/manager/MechanismPanel.java    |  121 --
 .../ToolInvocationConfigurationPanel.java       |  379 ----
 .../ToolInvocationConfigurationUIFactory.java   |   54 -
 .../local/LocalInvocationMechanismEditor.java   |  122 --
 .../manager/ssh/ExternalToolSshNodeViewer.java  |  110 -
 .../ssh/SshInvocationMechanismEditor.java       |  234 ---
 .../AddExternalToolContextualMenuAction.java    |  111 -
 .../menu/AddExternalToolMenuAction.java         |  111 -
 .../menu/ConfigureExternalToolMenuAction.java   |   69 -
 .../externaltool/menu/FeedbackMenuAction.java   |   82 -
 .../AddExternalToolServiceDialog.java           |  189 --
 .../ExternalToolActivityIcon.java               |   73 -
 .../ExternalToolServiceDescription.java         |  149 --
 .../ExternalToolServiceProvider.java            |  132 --
 .../ExternalToolServiceProviderConfig.java      |   56 -
 .../ExternalToolTemplateServiceDescription.java |   77 -
 .../t2/activities/externaltool/utils/Tools.java |  129 --
 .../externaltool/views/AnnotationPanel.java     |   41 -
 .../externaltool/views/EditablePanel.java       |   76 -
 .../ExternalToolActivityContextualView.java     |  181 --
 .../views/ExternalToolActivityViewFactory.java  |   76 -
 .../views/ExternalToolConfigView.java           |  868 --------
 .../views/ExternalToolFileViewer.java           |  103 -
 .../ExternalToolRuntimeEnvironmentViewer.java   |   56 -
 .../views/ExternalToolStaticStringViewer.java   |   53 -
 .../views/ExternalToolStaticUrlViewer.java      |   56 -
 .../ExternalToolStringReplacementViewer.java    |   97 -
 .../externaltool/views/FilePanel.java           |  119 --
 .../externaltool/views/InvocationPanel.java     |  396 ----
 .../views/LoadDescriptionAction.java            |   89 -
 .../views/SaveDescriptionAction.java            |  124 --
 .../externaltool/views/ScriptPanel.java         |  149 --
 .../externaltool/views/StaticStringPanel.java   |  106 -
 .../externaltool/views/StaticUrlPanel.java      |  108 -
 .../views/StringReplacementPanel.java           |  134 --
 .../externaltool/views/ToolXMLPanel.java        |   33 -
 ...ternaltool.manager.InvocationMechanismEditor |    2 -
 ...rvicedescriptions.ServiceDescriptionProvider |    2 -
 .../net.sf.taverna.t2.ui.menu.MenuComponent     |    4 -
 .../net.sf.taverna.t2.workbench.ShutdownSPI     |    1 -
 .../net.sf.taverna.t2.workbench.StartupSPI      |    1 -
 ...a.t2.workbench.activityicons.ActivityIconSPI |    1 -
 ...rkbench.configuration.ConfigurationUIFactory |    1 -
 ...ntextualviews.activity.ContextualViewFactory |    1 -
 .../external-tool-activity-ui-context-osgi.xml  |   39 -
 .../external-tool-activity-ui-context.xml       |   50 -
 .../src/main/resources/externaltool.png         |  Bin 743 -> 0 bytes
 taverna-localworker-activity-ui/pom.xml         |  142 --
 .../LocalworkerActivityConfigurationAction.java |  117 --
 .../menu/ConfigureLocalworkerMenuAction.java    |   62 -
 .../LocalworkerActivityIcon.java                |   58 -
 .../LocalworkerServiceDescription.java          |  105 -
 .../LocalworkerServiceProvider.java             |  297 ---
 .../views/LocalworkerActivityConfigView.java    |   42 -
 .../LocalworkerActivityContextualView.java      |  115 --
 .../views/LocalworkerActivityViewFactory.java   |   82 -
 ...rvicedescriptions.ServiceDescriptionProvider |    1 -
 .../net.sf.taverna.t2.ui.menu.MenuComponent     |    1 -
 ...a.t2.workbench.activityicons.ActivityIconSPI |    1 -
 ...ntextualviews.activity.ContextualViewFactory |    1 -
 .../localworker-activity-ui-context-osgi.xml    |   24 -
 .../spring/localworker-activity-ui-context.xml  |   27 -
 .../src/main/resources/localworker.png          |  Bin 706 -> 0 bytes
 .../src/main/resources/localworker_names        |   67 -
 ...rna.scuflworkers.biojava.GenBankParserWorker |   74 -
 ...cuflworkers.biojava.GenBankParserWorker.json |   16 -
 ...verna.scuflworkers.biojava.ReverseCompWorker |   43 -
 ....scuflworkers.biojava.ReverseCompWorker.json |   16 -
 ...a.scuflworkers.biojava.SwissProtParserWorker |   72 -
 ...flworkers.biojava.SwissProtParserWorker.json |   16 -
 ...averna.scuflworkers.biojava.TranscribeWorker |   48 -
 ...a.scuflworkers.biojava.TranscribeWorker.json |   16 -
 ...na.scuflworkers.io.ConcatenateFileListWorker |  101 -
 ...uflworkers.io.ConcatenateFileListWorker.json |   24 -
 ...ge.taverna.scuflworkers.io.EnvVariableWorker |   33 -
 ...verna.scuflworkers.io.EnvVariableWorker.json |   11 -
 ...ge.taverna.scuflworkers.io.FileListByExtTask |   73 -
 ...verna.scuflworkers.io.FileListByExtTask.json |   20 -
 ....taverna.scuflworkers.io.FileListByRegexTask |   71 -
 ...rna.scuflworkers.io.FileListByRegexTask.json |   20 -
 ...ceforge.taverna.scuflworkers.io.LocalCommand |   80 -
 ...ge.taverna.scuflworkers.io.LocalCommand.json |   20 -
 ...forge.taverna.scuflworkers.io.TextFileReader |   76 -
 ....taverna.scuflworkers.io.TextFileReader.json |   20 -
 ...forge.taverna.scuflworkers.io.TextFileWriter |   57 -
 ....taverna.scuflworkers.io.TextFileWriter.json |   24 -
 ...rge.taverna.scuflworkers.jdbc.SQLQueryWorker |  309 ---
 ...averna.scuflworkers.jdbc.SQLQueryWorker.json |   44 -
 ...ge.taverna.scuflworkers.jdbc.SQLUpdateWorker |  229 ---
 ...verna.scuflworkers.jdbc.SQLUpdateWorker.json |   36 -
 ...erna.scuflworkers.ncbi.NucleotideFastaWorker |   45 -
 ...scuflworkers.ncbi.NucleotideFastaWorker.json |   16 -
 ...erna.scuflworkers.ncbi.NucleotideGBSeqWorker |   45 -
 ...scuflworkers.ncbi.NucleotideGBSeqWorker.json |   16 -
 ...scuflworkers.ncbi.NucleotideINSDSeqXMLWorker |   45 -
 ...workers.ncbi.NucleotideINSDSeqXMLWorker.json |   16 -
 ...scuflworkers.ncbi.NucleotideTinySeqXMLWorker |   45 -
 ...workers.ncbi.NucleotideTinySeqXMLWorker.json |   16 -
 ...taverna.scuflworkers.ncbi.ProteinFastaWorker |   45 -
 ...na.scuflworkers.ncbi.ProteinFastaWorker.json |   16 -
 ...taverna.scuflworkers.ncbi.ProteinGBSeqWorker |   45 -
 ...na.scuflworkers.ncbi.ProteinGBSeqWorker.json |   16 -
 ...na.scuflworkers.ncbi.ProteinINSDSeqXMLWorker |   45 -
 ...uflworkers.ncbi.ProteinINSDSeqXMLWorker.json |   16 -
 ...na.scuflworkers.ncbi.ProteinTinySeqXMLWorker |   45 -
 ...uflworkers.ncbi.ProteinTinySeqXMLWorker.json |   16 -
 ...taverna.scuflworkers.ncbi.PubMedEFetchWorker |   68 -
 ...na.scuflworkers.ncbi.PubMedEFetchWorker.json |   24 -
 ...averna.scuflworkers.ncbi.PubMedESearchWorker |  124 --
 ...a.scuflworkers.ncbi.PubMedESearchWorker.json |   44 -
 ...urceforge.taverna.scuflworkers.net.BrowseUrl |   31 -
 ...orge.taverna.scuflworkers.net.BrowseUrl.json |   11 -
 ...forge.taverna.scuflworkers.net.ExtractHeader |   55 -
 ....taverna.scuflworkers.net.ExtractHeader.json |   20 -
 ...ourceforge.taverna.scuflworkers.ui.AskWorker |   41 -
 ...forge.taverna.scuflworkers.ui.AskWorker.json |   20 -
 ...ceforge.taverna.scuflworkers.ui.ChooseWorker |   80 -
 ...ge.taverna.scuflworkers.ui.ChooseWorker.json |   24 -
 ...rge.taverna.scuflworkers.ui.SelectFileWorker |  116 --
 ...averna.scuflworkers.ui.SelectFileWorker.json |   24 -
 ...ceforge.taverna.scuflworkers.ui.SelectWorker |   53 -
 ...ge.taverna.scuflworkers.ui.SelectWorker.json |   24 -
 ...urceforge.taverna.scuflworkers.ui.TellWorker |   42 -
 ...orge.taverna.scuflworkers.ui.TellWorker.json |   20 -
 ...urceforge.taverna.scuflworkers.ui.WarnWorker |   42 -
 ...orge.taverna.scuflworkers.ui.WarnWorker.json |   20 -
 ...rge.taverna.scuflworkers.xml.XPathTextWorker |   75 -
 ...averna.scuflworkers.xml.XPathTextWorker.json |   24 -
 ...rceforge.taverna.scuflworkers.xml.XSLTWorker |  152 --
 ...rge.taverna.scuflworkers.xml.XSLTWorker.json |   28 -
 ...na.scuflworkers.xml.XSLTWorkerWithParameters |  100 -
 ...uflworkers.xml.XSLTWorkerWithParameters.json |   24 -
 ...escience.scuflworkers.java.ByteArrayToString |   44 -
 ...nce.scuflworkers.java.ByteArrayToString.json |   20 -
 ....ebi.escience.scuflworkers.java.DecodeBase64 |   31 -
 ...escience.scuflworkers.java.DecodeBase64.json |   16 -
 ...embl.ebi.escience.scuflworkers.java.EchoList |   26 -
 ...ebi.escience.scuflworkers.java.EchoList.json |   16 -
 ...escience.scuflworkers.java.EmitLotsOfStrings |   19 -
 ...nce.scuflworkers.java.EmitLotsOfStrings.json |   11 -
 ....ebi.escience.scuflworkers.java.EncodeBase64 |   30 -
 ...escience.scuflworkers.java.EncodeBase64.json |   16 -
 ...escience.scuflworkers.java.ExtractImageLinks |   41 -
 ...nce.scuflworkers.java.ExtractImageLinks.json |   16 -
 ....escience.scuflworkers.java.FilterStringList |   43 -
 ...ence.scuflworkers.java.FilterStringList.json |   20 -
 ...l.ebi.escience.scuflworkers.java.FlattenList |   39 -
 ....escience.scuflworkers.java.FlattenList.json |   16 -
 ...mbl.ebi.escience.scuflworkers.java.PadNumber |   44 -
 ...bi.escience.scuflworkers.java.PadNumber.json |   20 -
 ...cuflworkers.java.RegularExpressionStringList |   60 -
 ...orkers.java.RegularExpressionStringList.json |   24 -
 ...mbl.ebi.escience.scuflworkers.java.SendEmail |   85 -
 ...bi.escience.scuflworkers.java.SendEmail.json |   27 -
 ....ebi.escience.scuflworkers.java.SplitByRegex |   47 -
 ...escience.scuflworkers.java.SplitByRegex.json |   20 -
 ....ebi.escience.scuflworkers.java.StringConcat |   36 -
 ...escience.scuflworkers.java.StringConcat.json |   20 -
 ...i.escience.scuflworkers.java.StringListMerge |   49 -
 ...ience.scuflworkers.java.StringListMerge.json |   20 -
 ...cience.scuflworkers.java.StringSetDifference |   49 -
 ...e.scuflworkers.java.StringSetDifference.json |   20 -
 ...ence.scuflworkers.java.StringSetIntersection |   43 -
 ...scuflworkers.java.StringSetIntersection.json |   20 -
 ...bi.escience.scuflworkers.java.StringSetUnion |   43 -
 ...cience.scuflworkers.java.StringSetUnion.json |   20 -
 ...ence.scuflworkers.java.StringStripDuplicates |   33 -
 ...scuflworkers.java.StringStripDuplicates.json |   16 -
 ...scuflworkers.java.TestAlwaysFailingProcessor |   36 -
 ...workers.java.TestAlwaysFailingProcessor.json |   20 -
 ...science.scuflworkers.java.TestSometimesFails |   34 -
 ...ce.scuflworkers.java.TestSometimesFails.json |   16 -
 ...i.escience.scuflworkers.java.WebImageFetcher |   64 -
 ...ience.scuflworkers.java.WebImageFetcher.json |   20 -
 ...bi.escience.scuflworkers.java.WebPageFetcher |   68 -
 ...cience.scuflworkers.java.WebPageFetcher.json |   20 -
 taverna-rest-activity-ui/pom.xml                |   74 -
 .../rest/ui/config/HTTPHeadersTableModel.java   |  119 --
 .../config/RESTActivityConfigurationPanel.java  |  670 -------
 .../ui/config/RESTActivityConfigureAction.java  |   51 -
 .../rest/ui/menu/AddRESTTemplateAction.java     |  107 -
 .../rest/ui/menu/AddRESTTemplateMenuAction.java |  114 --
 .../GenericRESTTemplateService.java             |   76 -
 .../ui/servicedescription/RESTActivityIcon.java |   54 -
 .../serviceprovider/ExampleServiceDesc.java.bak |   99 -
 .../ExampleServiceProvider.java.bak             |  106 -
 .../ExampleServiceProviderConfig.java.bak       |   31 -
 .../view/ConfigureRESTActivityMenuAction.java   |   66 -
 .../RESTActivityMainContextViewFactory.java     |   62 -
 .../ui/view/RESTActivityMainContextualView.java |  220 --
 ...rvicedescriptions.ServiceDescriptionProvider |    1 -
 .../net.sf.taverna.t2.ui.menu.MenuComponent     |    3 -
 ...a.t2.workbench.activityicons.ActivityIconSPI |    1 -
 ...ntextualviews.activity.ContextualViewFactory |    1 -
 .../spring/rest-activity-ui-context-osgi.xml    |   28 -
 .../spring/rest-activity-ui-context.xml         |   50 -
 .../activities/rest/ui/config/information.png   |  Bin 778 -> 0 bytes
 .../t2/activities/rest/ui/config/mediatypes.txt |   65 -
 .../ui/servicedescription/service_type_rest.png |  Bin 1137 -> 0 bytes
 taverna-spreadsheet-import-activity-ui/pom.xml  |  107 -
 ...dsheetImportActivityConfigurationAction.java |   72 -
 .../il8n/SpreadsheetImportUIText.java           |   46 -
 .../SpreadsheetImportAddTemplateAction.java     |  110 -
 .../SpreadsheetImportAddTemplateMenuAction.java |  124 --
 .../SpreadsheetImportConfigureMenuAction.java   |   84 -
 .../SpreadsheetImportActivityIcon.java          |   71 -
 .../SpreadsheetImportTemplateService.java       |   95 -
 .../SpreadsheetImportConfigTableModel.java      |  190 --
 .../views/SpreadsheetImportConfigView.java      | 1082 ----------
 .../views/SpreadsheetImportContextualView.java  |  121 --
 .../SpreadsheetImportContextualViewFactory.java |   87 -
 ...rvicedescriptions.ServiceDescriptionProvider |    1 -
 .../net.sf.taverna.t2.ui.menu.MenuComponent     |    3 -
 ...a.t2.workbench.activityicons.ActivityIconSPI |    1 -
 ...ntextualviews.activity.ContextualViewFactory |    1 -
 ...eadsheet-import-activity-ui-context-osgi.xml |   28 -
 .../spreadsheet-import-activity-ui-context.xml  |   45 -
 .../spreadsheet/iln8/ui-text.properties         |   43 -
 .../src/main/resources/spreadsheet-import.png   |  Bin 4610 -> 0 bytes
 taverna-wsdl-activity-ui/pom.xml                |   95 -
 .../actions/AbstractAddXMLSplitterAction.java   |  156 --
 .../wsdl/actions/AddXMLInputSplitterAction.java |  104 -
 .../actions/AddXMLOutputSplitterAction.java     |  105 -
 .../wsdl/actions/AddXMLSplitterEdit.java        |  315 ---
 .../actions/WSDLActivityConfigureAction.java    |   71 -
 .../wsdl/actions/XMLSplitterPortBuilder.java    |  127 --
 ...LInputSplitterForWSDLActivityMenuAction.java |   11 -
 ...utSplitterForXMLInputSplitterMenuAction.java |   11 -
 .../menu/AddXMLInputSplitterMenuAction.java     |   70 -
 ...OutputSplitterForWSDLActivityMenuAction.java |   11 -
 ...tSplitterForXMLOutputSplitterMenuAction.java |   11 -
 .../menu/AddXMLOutputSplitterMenuAction.java    |   66 -
 .../wsdl/menu/ConfigureWSDLMenuAction.java      |   78 -
 .../AddWSDLServiceDialog.java                   |  303 ---
 .../ConfirmTrustedCertificateDialog.java        |  586 ------
 .../servicedescriptions/WSDLActivityIcon.java   |   60 -
 .../WSDLServiceDescription.java                 |  154 --
 .../WSDLServiceProvider.java                    |  206 --
 .../WSDLServiceProviderConfig.java              |   32 -
 .../XMLInputSplitterActivityIcon.java           |   63 -
 .../XMLOutputSplitterActivityIcon.java          |   64 -
 .../views/AbstractXMLSplitterActionView.java    |  159 --
 .../views/WSDLActivityConfigurationView.java    |  446 -----
 .../wsdl/views/WSDLActivityContextualView.java  |  108 -
 .../wsdl/views/WSDLActivityViewFactory.java     |   88 -
 .../wsdl/views/XMLSplitterContextualView.java   |   78 -
 .../wsdl/views/XMLSplitterViewFactory.java      |   66 -
 ...rvicedescriptions.ServiceDescriptionProvider |    1 -
 .../net.sf.taverna.t2.ui.menu.MenuComponent     |    5 -
 ...a.t2.workbench.activityicons.ActivityIconSPI |    3 -
 ...ntextualviews.activity.ContextualViewFactory |    2 -
 .../spring/wsdl-activity-ui-context-osgi.xml    |   37 -
 .../spring/wsdl-activity-ui-context.xml         |   53 -
 .../src/main/resources/wsdl.png                 |  Bin 748 -> 0 bytes
 .../src/main/resources/xml-input-splitter.png   |  Bin 309 -> 0 bytes
 .../src/main/resources/xml-output-splitter.png  |  Bin 298 -> 0 bytes
 .../src/main/resources/xml-splitter.png         |  Bin 327 -> 0 bytes
 .../views/TestWSDLActivityContextualView.java   |   53 -
 .../src/test/resources/GMService.wsdl           |   68 -
 .../src/test/resources/kegg.wsdl                | 1889 ------------------
 taverna-xpath-activity-ui/pom.xml               |   68 -
 .../xpath/ui/config/TwoFieldQueryPanel.java     |  110 -
 .../config/XPathActivityConfigurationPanel.java | 1202 -----------
 ...XPathActivityConfigurationPanelProvider.java |  158 --
 .../ui/config/XPathActivityConfigureAction.java |   52 -
 .../ui/config/xmltree/TableCellListener.java    |  186 --
 .../ui/config/xmltree/XPathActivityXMLTree.java |  572 ------
 .../XPathActivityXMLTreeAttributeNode.java      |   50 -
 .../XPathActivityXMLTreeElementNode.java        |   62 -
 .../xmltree/XPathActivityXMLTreeNode.java       |   81 -
 .../XPathActivityXMLTreeSelectionHandler.java   |  251 ---
 .../ConfigureXPathActivityMenuAction.java       |   65 -
 .../XPathActivityMainContextViewFactory.java    |   59 -
 .../XPathActivityMainContextualView.java        |  209 --
 .../xpath/ui/menu/AddXPathTemplateAction.java   |  110 -
 .../ui/menu/AddXPathTemplateMenuAction.java     |  117 --
 .../servicedescription/XPathActivityIcon.java   |   86 -
 .../XPathTemplateService.java                   |   57 -
 ...rvicedescriptions.ServiceDescriptionProvider |    1 -
 .../net.sf.taverna.t2.ui.menu.MenuComponent     |    3 -
 ...a.t2.workbench.activityicons.ActivityIconSPI |    1 -
 ...ntextualviews.activity.ContextualViewFactory |    1 -
 .../spring/xpath-activity-ui-context-osgi.xml   |   28 -
 .../spring/xpath-activity-ui-context.xml        |   49 -
 .../xpath/ui/servicedescription/arrow_right.png |  Bin 596 -> 0 bytes
 .../famfamfam_silk/accept.png                   |  Bin 781 -> 0 bytes
 .../famfamfam_silk/exclamation.png              |  Bin 701 -> 0 bytes
 .../servicedescription/famfamfam_silk/help.png  |  Bin 786 -> 0 bytes
 .../famfamfam_silk/page_white_code.png          |  Bin 603 -> 0 bytes
 .../servicedescription/famfamfam_silk/tag.png   |  Bin 389 -> 0 bytes
 .../text_linespacing (collapse).png             |  Bin 371 -> 0 bytes
 .../famfamfam_silk/text_linespacing.png         |  Bin 363 -> 0 bytes
 .../xpath/ui/servicedescription/folds/fold.png  |  Bin 331 -> 0 bytes
 .../ui/servicedescription/folds/unfold.png      |  Bin 334 -> 0 bytes
 .../ui/servicedescription/xpath_attribute.png   |  Bin 1426 -> 0 bytes
 .../src/test/java/Dom4JTest.java                |   71 -
 322 files changed, 26407 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/pom.xml
----------------------------------------------------------------------
diff --git a/pom.xml b/pom.xml
deleted file mode 100644
index 0c60cf1..0000000
--- a/pom.xml
+++ /dev/null
@@ -1,42 +0,0 @@
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-	<modelVersion>4.0.0</modelVersion>
-	<parent>
-		<groupId>org.apache.taverna</groupId>
-		<artifactId>taverna-parent</artifactId>
-		<version>1-incubating-SNAPSHOT</version>
-	</parent>
-	<groupId>org.apache.taverna.workbench.commonactivities</groupId>
-	<artifactId>taverna-workbench-commonactivities</artifactId>
-	<version>3.1.0-incubating-SNAPSHOT</version>
-	<packaging>pom</packaging>
-	<name>Apache Taverna Workbench Common Activities</name>
-  <description>User interface and Workbench integration for common activities</description>
-  <properties>
-    <taverna.language.version>0.15.0-incubating-SNAPSHOT</taverna.language.version>
-    <taverna.osgi.version>0.2.0-incubating-SNAPSHOT</taverna.osgi.version>
-    <taverna.engine.version>3.1.0-incubating-SNAPSHOT</taverna.engine.version>
-    <taverna.commonactivities.version>2.1.0-incubating-SNAPSHOT</taverna.commonactivities.version>
-    <taverna.workbench.version>3.1.0-incubating-SNAPSHOT</taverna.workbench.version>
-  </properties>
-	<modules>
-    <module>taverna-beanshell-activity-ui</module>
-    <module>taverna-external-tool-activity-ui</module>
-    <module>taverna-localworker-activity-ui</module>
-    <module>taverna-rest-activity-ui</module>
-    <module>taverna-spreadsheet-import-activity-ui</module>
-    <module>taverna-wsdl-activity-ui</module>
-    <module>taverna-xpath-activity-ui</module>
-  </modules>
-  <repositories>
-    <repository>
-      <id>taverna-incubating</id>
-      <name>Apache Taverna incubating Repository</name>
-        <url>http://repository.mygrid.org.uk/artifactory/incubator-snapshot-local/</url>
-      <releases>
-        <enabled>false</enabled>
-      </releases>
-      <snapshots />
-    </repository>
-  </repositories>
-</project>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/pom.xml b/taverna-beanshell-activity-ui/pom.xml
deleted file mode 100644
index 0afe9ef..0000000
--- a/taverna-beanshell-activity-ui/pom.xml
+++ /dev/null
@@ -1,100 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
-	<modelVersion>4.0.0</modelVersion>
-	<parent>
-		<groupId>net.sf.taverna</groupId>
-                <artifactId>taverna-parent</artifactId>
-                <version>3.0.1-SNAPSHOT</version>
-	</parent>
-	<groupId>net.sf.taverna.t2.ui-activities</groupId>
-	<artifactId>beanshell-activity-ui</artifactId>
-        <version>2.0-SNAPSHOT</version>
-	<packaging>bundle</packaging>
-	<name>Taverna 2 Beanshell Activity UI</name>
-	<dependencies>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>activity-icons-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>activity-palette-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>activity-tools</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>edits-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>file-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>menu-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-components</groupId>
-			<artifactId>workflow-view</artifactId>
-			<version>${t2.ui.components.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.lang</groupId>
-			<artifactId>ui</artifactId>
-			<version>${t2.lang.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>uk.org.taverna.configuration</groupId>
-			<artifactId>taverna-app-configuration-api</artifactId>
-			<version>${taverna.configuration.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>uk.org.taverna.commons</groupId>
-			<artifactId>taverna-services-api</artifactId>
-			<version>0.1.0-SNAPSHOT</version>
-		</dependency>
-		<dependency>
-			<groupId>uk.org.taverna.scufl2</groupId>
-			<artifactId>scufl2-api</artifactId>
-			<version>${scufl2.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>junit</groupId>
-			<artifactId>junit</artifactId>
-                        <version>${junit.version}</version>
-			<scope>test</scope>
-		</dependency>
-	</dependencies>
-	<repositories>
-		<repository>
-			<releases />
-			<snapshots>
-				<enabled>false</enabled>
-			</snapshots>
-			<id>mygrid-repository</id>
-			<name>myGrid Repository</name>
-			<url>http://www.mygrid.org.uk/maven/repository
-			</url>
-		</repository>
-		<repository>
-			<releases>
-				<enabled>false</enabled>
-			</releases>
-			<snapshots />
-			<id>mygrid-snapshot-repository</id>
-			<name>myGrid Snapshot Repository</name>
-			<url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
-		</repository>
-	</repositories>
-</project>
-

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/actions/BeanshellActivityConfigurationAction.java
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/actions/BeanshellActivityConfigurationAction.java b/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/actions/BeanshellActivityConfigurationAction.java
deleted file mode 100644
index fe6159c..0000000
--- a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/actions/BeanshellActivityConfigurationAction.java
+++ /dev/null
@@ -1,71 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.activities.beanshell.actions;
-
-import java.awt.Frame;
-import java.awt.event.ActionEvent;
-
-import net.sf.taverna.t2.activities.beanshell.views.BeanshellConfigurationPanel;
-import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry;
-import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.file.FileManager;
-import net.sf.taverna.t2.workbench.ui.actions.activity.ActivityConfigurationAction;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ActivityConfigurationDialog;
-import uk.org.taverna.configuration.app.ApplicationConfiguration;
-import uk.org.taverna.scufl2.api.activity.Activity;
-
-@SuppressWarnings("serial")
-public class BeanshellActivityConfigurationAction extends ActivityConfigurationAction {
-
-	public static final String EDIT_BEANSHELL_SCRIPT = "Edit beanshell script";
-	private final EditManager editManager;
-	private final FileManager fileManager;
-	private final ApplicationConfiguration applicationConfiguration;
-
-	public BeanshellActivityConfigurationAction(Activity activity, Frame owner,
-			EditManager editManager, FileManager fileManager,
-			ActivityIconManager activityIconManager,
-			ServiceDescriptionRegistry serviceDescriptionRegistry,
-			ApplicationConfiguration applicationConfiguration) {
-		super(activity, activityIconManager, serviceDescriptionRegistry);
-		this.editManager = editManager;
-		this.fileManager = fileManager;
-		this.applicationConfiguration = applicationConfiguration;
-		putValue(NAME, EDIT_BEANSHELL_SCRIPT);
-	}
-
-	public void actionPerformed(ActionEvent e) {
-		ActivityConfigurationDialog currentDialog = ActivityConfigurationAction.getDialog(getActivity());
-		if (currentDialog != null) {
-			currentDialog.toFront();
-			return;
-		}
-		final BeanshellConfigurationPanel beanshellConfigView = new BeanshellConfigurationPanel(
-				getActivity(), applicationConfiguration);
-		final ActivityConfigurationDialog dialog = new ActivityConfigurationDialog(getActivity(),
-				beanshellConfigView, editManager);
-
-		ActivityConfigurationAction.setDialog(getActivity(), dialog, fileManager);
-
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/AddBeanshellTemplateAction.java
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/AddBeanshellTemplateAction.java b/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/AddBeanshellTemplateAction.java
deleted file mode 100644
index 97eab18..0000000
--- a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/AddBeanshellTemplateAction.java
+++ /dev/null
@@ -1,113 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007-2009 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.activities.beanshell.menu;
-
-import java.awt.event.ActionEvent;
-import java.net.URI;
-
-import javax.swing.AbstractAction;
-import javax.swing.Action;
-
-import net.sf.taverna.t2.activities.beanshell.servicedescriptions.BeanshellTemplateService;
-import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry;
-import net.sf.taverna.t2.ui.menu.AbstractContextualMenuAction;
-import net.sf.taverna.t2.ui.menu.MenuManager;
-import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.selection.SelectionManager;
-import net.sf.taverna.t2.workbench.ui.workflowview.WorkflowView;
-import uk.org.taverna.commons.services.ServiceRegistry;
-import uk.org.taverna.scufl2.api.core.Workflow;
-
-/**
- * An action to add a beanshell activity + a wrapping processor to the workflow.
- *
- * @author Alex Nenadic
- * @author David Withers
- */
-@SuppressWarnings("serial")
-public class AddBeanshellTemplateAction extends AbstractContextualMenuAction {
-
-	private static final String ADD_BEANSHELL = "Beanshell";
-
-	private static final URI insertSection = URI
-			.create("http://taverna.sf.net/2009/contextMenu/insert");
-
-	private EditManager editManager;
-	private MenuManager menuManager;
-	private SelectionManager selectionManager;
-	private ActivityIconManager activityIconManager;
-	private ServiceDescriptionRegistry serviceDescriptionRegistry;
-	private ServiceRegistry serviceRegistry;
-
-	public AddBeanshellTemplateAction() {
-		super(insertSection, 300);
-	}
-
-	@Override
-	public boolean isEnabled() {
-		return super.isEnabled() && getContextualSelection().getSelection() instanceof Workflow;
-	}
-
-	@Override
-	protected Action createAction() {
-
-		return new AddBeanshellAction();
-	}
-
-	protected class AddBeanshellAction extends AbstractAction {
-		AddBeanshellAction() {
-			super(ADD_BEANSHELL, activityIconManager
-					.iconForActivity(BeanshellTemplateService.ACTIVITY_TYPE));
-		}
-
-		public void actionPerformed(ActionEvent e) {
-			WorkflowView.importServiceDescription(serviceDescriptionRegistry
-					.getServiceDescription(BeanshellTemplateService.ACTIVITY_TYPE), false,
-					editManager, menuManager, selectionManager, serviceRegistry);
-		}
-	}
-
-	public void setEditManager(EditManager editManager) {
-		this.editManager = editManager;
-	}
-
-	public void setMenuManager(MenuManager menuManager) {
-		this.menuManager = menuManager;
-	}
-
-	public void setSelectionManager(SelectionManager selectionManager) {
-		this.selectionManager = selectionManager;
-	}
-
-	public void setActivityIconManager(ActivityIconManager activityIconManager) {
-		this.activityIconManager = activityIconManager;
-	}
-
-	public void setServiceDescriptionRegistry(ServiceDescriptionRegistry serviceDescriptionRegistry) {
-		this.serviceDescriptionRegistry = serviceDescriptionRegistry;
-	}
-
-	public void setServiceRegistry(ServiceRegistry serviceRegistry) {
-		this.serviceRegistry = serviceRegistry;
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/AddBeanshellTemplateMenuAction.java
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/AddBeanshellTemplateMenuAction.java b/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/AddBeanshellTemplateMenuAction.java
deleted file mode 100644
index 7933000..0000000
--- a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/AddBeanshellTemplateMenuAction.java
+++ /dev/null
@@ -1,121 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007-2009 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.activities.beanshell.menu;
-
-import java.awt.event.ActionEvent;
-import java.awt.event.InputEvent;
-import java.awt.event.KeyEvent;
-import java.net.URI;
-
-import javax.swing.AbstractAction;
-import javax.swing.Action;
-import javax.swing.KeyStroke;
-
-import net.sf.taverna.t2.activities.beanshell.servicedescriptions.BeanshellTemplateService;
-import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry;
-import net.sf.taverna.t2.ui.menu.AbstractMenuAction;
-import net.sf.taverna.t2.ui.menu.DesignOnlyAction;
-import net.sf.taverna.t2.ui.menu.MenuManager;
-import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.selection.SelectionManager;
-import net.sf.taverna.t2.workbench.ui.workflowview.WorkflowView;
-import uk.org.taverna.commons.services.ServiceRegistry;
-
-/**
- * An action to add a beanshell activity + a wrapping processor to the workflow.
- *
- * @author Alex Nenadic
- * @author alanrw
- * @author David Withers
- */
-@SuppressWarnings("serial")
-public class AddBeanshellTemplateMenuAction extends AbstractMenuAction {
-
-	private static final String ADD_BEANSHELL = "Beanshell";
-
-	private static final URI INSERT = URI
-			.create("http://taverna.sf.net/2008/t2workbench/menu#insert");
-
-	private static final URI ADD_BEANSHELL_URI = URI
-			.create("http://taverna.sf.net/2008/t2workbench/menu#graphMenuAddBeanshell");
-
-	private EditManager editManager;
-	private MenuManager menuManager;
-	private SelectionManager selectionManager;
-	private ActivityIconManager activityIconManager;
-	private ServiceDescriptionRegistry serviceDescriptionRegistry;
-	private ServiceRegistry serviceRegistry;
-
-	public AddBeanshellTemplateMenuAction() {
-		super(INSERT, 300, ADD_BEANSHELL_URI);
-	}
-
-	@Override
-	protected Action createAction() {
-		return new AddBeanshellMenuAction();
-	}
-
-	protected class AddBeanshellMenuAction extends AbstractAction implements DesignOnlyAction {
-		AddBeanshellMenuAction() {
-			super();
-			putValue(SMALL_ICON,
-					activityIconManager.iconForActivity(BeanshellTemplateService.ACTIVITY_TYPE));
-			putValue(NAME, ADD_BEANSHELL);
-			putValue(SHORT_DESCRIPTION, "Beanshell service");
-			putValue(
-					Action.ACCELERATOR_KEY,
-					KeyStroke.getKeyStroke(KeyEvent.VK_B, InputEvent.SHIFT_DOWN_MASK
-							| InputEvent.ALT_DOWN_MASK));
-		}
-
-		public void actionPerformed(ActionEvent e) {
-			WorkflowView.importServiceDescription(serviceDescriptionRegistry
-					.getServiceDescription(BeanshellTemplateService.ACTIVITY_TYPE), false,
-					editManager, menuManager, selectionManager, serviceRegistry);
-		}
-	}
-
-	public void setEditManager(EditManager editManager) {
-		this.editManager = editManager;
-	}
-
-	public void setMenuManager(MenuManager menuManager) {
-		this.menuManager = menuManager;
-	}
-
-	public void setSelectionManager(SelectionManager selectionManager) {
-		this.selectionManager = selectionManager;
-	}
-
-	public void setActivityIconManager(ActivityIconManager activityIconManager) {
-		this.activityIconManager = activityIconManager;
-	}
-
-	public void setServiceDescriptionRegistry(ServiceDescriptionRegistry serviceDescriptionRegistry) {
-		this.serviceDescriptionRegistry = serviceDescriptionRegistry;
-	}
-
-	public void setServiceRegistry(ServiceRegistry serviceRegistry) {
-		this.serviceRegistry = serviceRegistry;
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/ConfigureBeanshellMenuAction.java
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/ConfigureBeanshellMenuAction.java b/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/ConfigureBeanshellMenuAction.java
deleted file mode 100644
index 64ef0c8..0000000
--- a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/menu/ConfigureBeanshellMenuAction.java
+++ /dev/null
@@ -1,67 +0,0 @@
-package net.sf.taverna.t2.activities.beanshell.menu;
-
-import java.net.URI;
-
-import net.sf.taverna.t2.activities.beanshell.actions.BeanshellActivityConfigurationAction;
-import net.sf.taverna.t2.activities.beanshell.servicedescriptions.BeanshellTemplateService;
-import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry;
-import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager;
-import net.sf.taverna.t2.workbench.activitytools.AbstractConfigureActivityMenuAction;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.file.FileManager;
-
-import javax.swing.Action;
-
-import uk.org.taverna.configuration.app.ApplicationConfiguration;
-import uk.org.taverna.scufl2.api.activity.Activity;
-
-public class ConfigureBeanshellMenuAction extends AbstractConfigureActivityMenuAction {
-
-	public static final URI LOCALWORKER_ACTIVITY = URI
-			.create("http://ns.taverna.org.uk/2010/activity/localworker");
-
-	private EditManager editManager;
-	private FileManager fileManager;
-	private ActivityIconManager activityIconManager;
-	private ServiceDescriptionRegistry serviceDescriptionRegistry;
-	private ApplicationConfiguration applicationConfiguration;
-
-	public ConfigureBeanshellMenuAction() {
-		super(BeanshellTemplateService.ACTIVITY_TYPE);
-	}
-
-	@Override
-	protected Action createAction() {
-		Activity a = findActivity();
-		Action result = null;
-		if (!(a.getType().equals(LOCALWORKER_ACTIVITY))) {
-			result = new BeanshellActivityConfigurationAction(findActivity(), getParentFrame(),
-					editManager, fileManager, activityIconManager, serviceDescriptionRegistry,
-					applicationConfiguration);
-			result.putValue(Action.NAME, BeanshellActivityConfigurationAction.EDIT_BEANSHELL_SCRIPT);
-			addMenuDots(result);
-		}
-		return result;
-	}
-
-	public void setEditManager(EditManager editManager) {
-		this.editManager = editManager;
-	}
-
-	public void setFileManager(FileManager fileManager) {
-		this.fileManager = fileManager;
-	}
-
-	public void setActivityIconManager(ActivityIconManager activityIconManager) {
-		this.activityIconManager = activityIconManager;
-	}
-
-	public void setServiceDescriptionRegistry(ServiceDescriptionRegistry serviceDescriptionRegistry) {
-		this.serviceDescriptionRegistry = serviceDescriptionRegistry;
-	}
-
-	public void setApplicationConfiguration(ApplicationConfiguration applicationConfiguration) {
-		this.applicationConfiguration = applicationConfiguration;
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/servicedescriptions/BeanshellActivityIcon.java
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/servicedescriptions/BeanshellActivityIcon.java b/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/servicedescriptions/BeanshellActivityIcon.java
deleted file mode 100644
index 055aa81..0000000
--- a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/servicedescriptions/BeanshellActivityIcon.java
+++ /dev/null
@@ -1,58 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.activities.beanshell.servicedescriptions;
-
-import java.net.URI;
-
-import javax.swing.Icon;
-import javax.swing.ImageIcon;
-
-import net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI;
-
-/**
- *
- * @author Alex Nenadic
- * @author David Withers
- */
-public class BeanshellActivityIcon implements ActivityIconSPI {
-
-	private static Icon icon = null;
-
-	@Override
-	public int canProvideIconScore(URI activityType) {
-		if (BeanshellTemplateService.ACTIVITY_TYPE.equals(activityType))
-			return DEFAULT_ICON + 1;
-		else
-			return NO_ICON;
-	}
-
-	@Override
-	public Icon getIcon(URI activityType) {
-		return getBeanshellIcon();
-	}
-
-	public static Icon getBeanshellIcon() {
-		if (icon == null) {
-			icon = new ImageIcon(BeanshellActivityIcon.class.getResource("/beanshell.png"));
-		}
-		return icon;
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/servicedescriptions/BeanshellTemplateService.java
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/servicedescriptions/BeanshellTemplateService.java b/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/servicedescriptions/BeanshellTemplateService.java
deleted file mode 100644
index c2cb38f..0000000
--- a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/servicedescriptions/BeanshellTemplateService.java
+++ /dev/null
@@ -1,57 +0,0 @@
-package net.sf.taverna.t2.activities.beanshell.servicedescriptions;
-
-import java.net.URI;
-
-import javax.swing.Icon;
-
-import net.sf.taverna.t2.servicedescriptions.AbstractTemplateService;
-import net.sf.taverna.t2.servicedescriptions.ServiceDescription;
-import uk.org.taverna.scufl2.api.configurations.Configuration;
-
-public class BeanshellTemplateService extends AbstractTemplateService {
-
-	public static final URI ACTIVITY_TYPE = URI.create("http://ns.taverna.org.uk/2010/activity/beanshell");
-
-	private static final String BEANSHELL = "Beanshell";
-
-	private static final URI providerId = URI
-	.create("http://taverna.sf.net/2010/service-provider/beanshell");
-
-	public String getName() {
-		return BEANSHELL;
-	}
-
-	@Override
-	public URI getActivityType() {
-		return ACTIVITY_TYPE;
-	}
-
-	@Override
-	public Configuration getActivityConfiguration() {
-		Configuration configuration = new Configuration();
-		configuration.setType(ACTIVITY_TYPE.resolve("#Config"));
-		configuration.getJsonAsObjectNode().put("script", "");
-		configuration.getJsonAsObjectNode().put("classLoaderSharing", "workflow");
-		return configuration;
-	}
-
-	@Override
-	public Icon getIcon() {
-		return BeanshellActivityIcon.getBeanshellIcon();
-	}
-
-	@Override
-	public String getDescription() {
-		return "A service that allows Beanshell scripts, with dependencies on libraries";
-	}
-
-	public static ServiceDescription getServiceDescription() {
-		BeanshellTemplateService bts = new BeanshellTemplateService();
-		return bts.templateService;
-	}
-
-	public String getId() {
-		return providerId.toString();
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellActivityViewFactory.java
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellActivityViewFactory.java b/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellActivityViewFactory.java
deleted file mode 100644
index 5c83730..0000000
--- a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellActivityViewFactory.java
+++ /dev/null
@@ -1,84 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.activities.beanshell.views;
-
-import java.net.URI;
-import java.util.Arrays;
-import java.util.List;
-
-import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry;
-import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager;
-import net.sf.taverna.t2.workbench.configuration.colour.ColourManager;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.file.FileManager;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.ContextualView;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory;
-import uk.org.taverna.configuration.app.ApplicationConfiguration;
-import uk.org.taverna.scufl2.api.activity.Activity;
-
-public class BeanshellActivityViewFactory implements ContextualViewFactory<Activity> {
-
-	private static final URI ACTIVITY_TYPE = URI
-			.create("http://ns.taverna.org.uk/2010/activity/beanshell");
-
-	private EditManager editManager;
-	private FileManager fileManager;
-	private ActivityIconManager activityIconManager;
-	private ColourManager colourManager;
-	private ServiceDescriptionRegistry serviceDescriptionRegistry;
-
-	private ApplicationConfiguration applicationConfiguration;
-
-	public boolean canHandle(Object object) {
-		return object instanceof Activity && ((Activity) object).getType().equals(ACTIVITY_TYPE);
-	}
-
-	public List<ContextualView> getViews(Activity activity) {
-		return Arrays.asList(new ContextualView[] { new BeanshellContextualView(activity,
-				editManager, fileManager, activityIconManager, colourManager,
-				serviceDescriptionRegistry, applicationConfiguration) });
-	}
-
-	public void setEditManager(EditManager editManager) {
-		this.editManager = editManager;
-	}
-
-	public void setFileManager(FileManager fileManager) {
-		this.fileManager = fileManager;
-	}
-
-	public void setActivityIconManager(ActivityIconManager activityIconManager) {
-		this.activityIconManager = activityIconManager;
-	}
-
-	public void setColourManager(ColourManager colourManager) {
-		this.colourManager = colourManager;
-	}
-
-	public void setServiceDescriptionRegistry(ServiceDescriptionRegistry serviceDescriptionRegistry) {
-		this.serviceDescriptionRegistry = serviceDescriptionRegistry;
-	}
-
-	public void setApplicationConfiguration(ApplicationConfiguration applicationConfiguration) {
-		this.applicationConfiguration = applicationConfiguration;
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellConfigurationPanel.java
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellConfigurationPanel.java b/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellConfigurationPanel.java
deleted file mode 100644
index 8489d7a..0000000
--- a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellConfigurationPanel.java
+++ /dev/null
@@ -1,231 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2012 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.activities.beanshell.views;
-
-import java.awt.Component;
-import java.awt.Dimension;
-import java.awt.GridBagConstraints;
-import java.awt.GridBagLayout;
-import java.io.File;
-import java.util.ArrayList;
-import java.util.HashSet;
-import java.util.List;
-import java.util.Set;
-
-import javax.swing.JLabel;
-import javax.swing.JPanel;
-import javax.swing.JSpinner;
-import javax.swing.SpinnerNumberModel;
-import javax.swing.event.ChangeEvent;
-import javax.swing.event.ChangeListener;
-import javax.swing.event.DocumentEvent;
-import javax.swing.event.DocumentListener;
-
-import net.sf.taverna.t2.lang.ui.EditorKeySetUtil;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ActivityPortConfiguration;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.DependencyConfigurationPanel;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ListConfigurationComponent;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.MultiPageActivityConfigurationPanel;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ScriptConfigurationComponent;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ValidatingTextField;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ValidatingTextGroup;
-import uk.org.taverna.configuration.app.ApplicationConfiguration;
-import uk.org.taverna.scufl2.api.activity.Activity;
-import uk.org.taverna.scufl2.api.port.InputActivityPort;
-import uk.org.taverna.scufl2.api.port.OutputActivityPort;
-
-import com.fasterxml.jackson.databind.JsonNode;
-import com.fasterxml.jackson.databind.node.ArrayNode;
-
-/**
- * Component for configuring a Beanshell activity.
- *
- * @author David Withers
- */
-@SuppressWarnings("serial")
-public class BeanshellConfigurationPanel extends MultiPageActivityConfigurationPanel {
-
-	private ScriptConfigurationComponent scriptConfigurationComponent;
-	private ValidatingTextGroup inputTextGroup, outputTextGroup;
-	private DependencyConfigurationPanel dependencyConfigurationPanel;
-	private File libDir;
-
-	public BeanshellConfigurationPanel(Activity activity,
-			ApplicationConfiguration applicationConfiguration) {
-		super(activity);
-		libDir = new File(applicationConfiguration.getApplicationHomeDir(), "lib");
-		if (!libDir.exists()) {
-			libDir.mkdir();
-		}
-		initialise();
-	}
-
-	@Override
-	protected void initialise() {
-		super.initialise();
-		removeAllPages();
-		addPage("Script", createScriptEditPanel());
-		addPage("Input ports", createInputPanel());
-		addPage("Output ports", createOutputPanel());
-		addPage("Dependencies", createDependenciesPanel());
-		setPreferredSize(new Dimension(600, 500));
-	}
-
-	@Override
-	public void noteConfiguration() {
-		setProperty("script", scriptConfigurationComponent.getScript());
-		setProperty("classLoaderSharing", dependencyConfigurationPanel.getClassLoaderSharing());
-		List<String> localDependencies = dependencyConfigurationPanel.getLocalDependencies();
-		if (localDependencies == null || localDependencies.isEmpty()) {
-			getJson().remove("localDependency");
-		} else {
-			ArrayNode localDependenciesArray = getJson().arrayNode();
-			for (String localDependency : localDependencies) {
-				localDependenciesArray.add(localDependency);
-			}
-			getJson().put("localDependency", localDependenciesArray);
-		}
-	}
-
-	@Override
-	public boolean checkValues() {
-		return true;
-	}
-
-	private Component createScriptEditPanel() {
-		Set<String> keywords = EditorKeySetUtil.loadKeySet(getClass().getResourceAsStream(
-				"keys.txt"));
-		Set<String> ports = new HashSet<>();
-		for (InputActivityPort ip : getActivity().getInputPorts()) {
-			ports.add(ip.getName());
-		}
-		for (OutputActivityPort op : getActivity().getOutputPorts()) {
-			ports.add(op.getName());
-		}
-		scriptConfigurationComponent = new ScriptConfigurationComponent(getProperty("script"),
-				keywords, ports, "Beanshell", ".bsh");
-		return scriptConfigurationComponent;
-	}
-
-	private Component createInputPanel() {
-		inputTextGroup = new ValidatingTextGroup();
-		ListConfigurationComponent<ActivityPortConfiguration> inputPanel = new ListConfigurationComponent<ActivityPortConfiguration>(
-				"Input Port", getInputPorts()) {
-			@Override
-			protected Component createItemComponent(ActivityPortConfiguration port) {
-				return new PortComponent(port, inputTextGroup);
-			}
-
-			@Override
-			protected ActivityPortConfiguration createDefaultItem() {
-				return new ActivityPortConfiguration("in", 0);
-			}
-		};
-		return inputPanel;
-	}
-
-	private Component createOutputPanel() {
-		outputTextGroup = new ValidatingTextGroup();
-		ListConfigurationComponent<ActivityPortConfiguration> inputPanel = new ListConfigurationComponent<ActivityPortConfiguration>(
-				"Output Port", getOutputPorts()) {
-			@Override
-			protected Component createItemComponent(ActivityPortConfiguration port) {
-				return new PortComponent(port, outputTextGroup);
-			}
-
-			@Override
-			protected ActivityPortConfiguration createDefaultItem() {
-				return new ActivityPortConfiguration("out", 0);
-			}
-		};
-		return inputPanel;
-	}
-
-	private Component createDependenciesPanel() {
-		String classLoaderSharing = getProperty("classLoaderSharing");
-		List<String> localDependencies = new ArrayList<>();
-		if (getJson().has("localDependency")) {
-			for (JsonNode localDependency : getJson().get("localDependency")) {
-				localDependencies.add(localDependency.textValue());
-			}
-		}
-		dependencyConfigurationPanel = new DependencyConfigurationPanel(classLoaderSharing,
-				localDependencies, libDir);
-		return dependencyConfigurationPanel;
-	}
-
-	class PortComponent extends JPanel {
-
-		private ValidatingTextField nameField;
-		private SpinnerNumberModel depthModel;
-		private final ValidatingTextGroup validatingTextGroup;
-
-		public PortComponent(final ActivityPortConfiguration portConfiguration,
-				ValidatingTextGroup validatingTextGroup) {
-			this.validatingTextGroup = validatingTextGroup;
-
-			nameField = new ValidatingTextField(portConfiguration.getName());
-			nameField.getDocument().addDocumentListener(new DocumentListener() {
-				@Override
-				public void removeUpdate(DocumentEvent e) {
-					portConfiguration.setName(nameField.getText());
-				}
-
-				@Override
-				public void insertUpdate(DocumentEvent e) {
-					portConfiguration.setName(nameField.getText());
-				}
-
-				@Override
-				public void changedUpdate(DocumentEvent e) {
-					portConfiguration.setName(nameField.getText());
-				}
-			});
-			validatingTextGroup.addValidTextComponent(nameField);
-			depthModel = new SpinnerNumberModel(portConfiguration.getDepth(), 0, 100, 1);
-			depthModel.addChangeListener(new ChangeListener() {
-				@Override
-				public void stateChanged(ChangeEvent e) {
-					portConfiguration.setDepth(depthModel.getNumber().intValue());
-				}
-			});
-
-			setLayout(new GridBagLayout());
-			GridBagConstraints c = new GridBagConstraints();
-			c.anchor = GridBagConstraints.WEST;
-			add(new JLabel("Name"), c);
-			c.fill = GridBagConstraints.HORIZONTAL;
-			c.weightx = 1;
-			add(nameField, c);
-			c.fill = GridBagConstraints.NONE;
-			c.weightx = 0;
-			add(new JLabel("Depth"), c);
-			add(new JSpinner(depthModel), c);
-
-		}
-
-		public void removeNotify() {
-			validatingTextGroup.removeTextComponent(nameField);
-		}
-
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellContextualView.java
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellContextualView.java b/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellContextualView.java
deleted file mode 100644
index e738e38..0000000
--- a/taverna-beanshell-activity-ui/src/main/java/net/sf/taverna/t2/activities/beanshell/views/BeanshellContextualView.java
+++ /dev/null
@@ -1,104 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.activities.beanshell.views;
-
-import java.awt.Frame;
-
-import javax.swing.Action;
-
-import net.sf.taverna.t2.activities.beanshell.actions.BeanshellActivityConfigurationAction;
-import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry;
-import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager;
-import net.sf.taverna.t2.workbench.configuration.colour.ColourManager;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.file.FileManager;
-import net.sf.taverna.t2.workbench.ui.actions.activity.HTMLBasedActivityContextualView;
-import uk.org.taverna.configuration.app.ApplicationConfiguration;
-import uk.org.taverna.scufl2.api.activity.Activity;
-import uk.org.taverna.scufl2.api.port.InputActivityPort;
-import uk.org.taverna.scufl2.api.port.OutputActivityPort;
-
-/**
- * A simple non editable HTML table view over a {@link BeanshellActivity}.
- * Clicking on the configure button shows the editable {@link BeanshellConfigView}
- *
- * @author Ian Dunlop
- * @author Stuart Owen
- * @author David Withers
- */
-@SuppressWarnings("serial")
-public class BeanshellContextualView extends HTMLBasedActivityContextualView {
-
-	private EditManager editManager;
-	private FileManager fileManager;
-	private final ActivityIconManager activityIconManager;
-	private final ServiceDescriptionRegistry serviceDescriptionRegistry;
-	private final ApplicationConfiguration applicationConfiguration;
-
-	public BeanshellContextualView(Activity activity, EditManager editManager,
-			FileManager fileManager, ActivityIconManager activityIconManager,
-			ColourManager colourManager, ServiceDescriptionRegistry serviceDescriptionRegistry,
-			ApplicationConfiguration applicationConfiguration) {
-		super(activity, colourManager);
-		this.editManager = editManager;
-		this.fileManager = fileManager;
-		this.activityIconManager = activityIconManager;
-		this.serviceDescriptionRegistry = serviceDescriptionRegistry;
-		this.applicationConfiguration = applicationConfiguration;
-		init();
-	}
-
-	private void init() {
-	}
-
-	@Override
-	protected String getRawTableRowsHtml() {
-		StringBuilder html = new StringBuilder();
-		html.append("<tr><th>Input Port Name</th><th>Depth</th></tr>");
-		for (InputActivityPort inputActivityPort : getActivity().getInputPorts()) {
-			html.append("<tr><td>" + inputActivityPort.getName() + "</td><td>");
-			html.append(inputActivityPort.getDepth() + "</td></tr>");
-		}
-		html.append("<tr><th>Output Port Name</th><th>Depth</th></tr>");
-		for (OutputActivityPort outputActivityPort : getActivity().getOutputPorts()) {
-			html.append("<tr><td>" + outputActivityPort.getName() + "</td><td>");
-			html.append(outputActivityPort.getDepth() + "</td></tr>");
-		}
-		return html.toString();
-	}
-
-	@Override
-	public String getViewTitle() {
-		return "Beanshell service";
-	}
-
-	@Override
-	public Action getConfigureAction(Frame owner) {
-		return new BeanshellActivityConfigurationAction(getActivity(), owner, editManager,
-				fileManager, activityIconManager, serviceDescriptionRegistry, applicationConfiguration);
-	}
-
-	@Override
-	public int getPreferredPosition() {
-		return 100;
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider b/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider
deleted file mode 100644
index a77db8d..0000000
--- a/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider
+++ /dev/null
@@ -1 +0,0 @@
-net.sf.taverna.t2.activities.beanshell.servicedescriptions.BeanshellTemplateService

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.ui.menu.MenuComponent
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.ui.menu.MenuComponent b/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.ui.menu.MenuComponent
deleted file mode 100644
index a3c71cd..0000000
--- a/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.ui.menu.MenuComponent
+++ /dev/null
@@ -1,3 +0,0 @@
-net.sf.taverna.t2.activities.beanshell.menu.AddBeanshellTemplateAction
-net.sf.taverna.t2.activities.beanshell.menu.AddBeanshellTemplateMenuAction
-net.sf.taverna.t2.activities.beanshell.menu.ConfigureBeanshellMenuAction

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI b/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI
deleted file mode 100644
index a268bf1..0000000
--- a/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI
+++ /dev/null
@@ -1 +0,0 @@
-net.sf.taverna.t2.activities.beanshell.servicedescriptions.BeanshellActivityIcon
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory b/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory
deleted file mode 100644
index dcdf598..0000000
--- a/taverna-beanshell-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory
+++ /dev/null
@@ -1 +0,0 @@
-net.sf.taverna.t2.activities.beanshell.views.BeanshellActivityViewFactory
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/resources/META-INF/spring/beanshell-activity-ui-context-osgi.xml
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/resources/META-INF/spring/beanshell-activity-ui-context-osgi.xml b/taverna-beanshell-activity-ui/src/main/resources/META-INF/spring/beanshell-activity-ui-context-osgi.xml
deleted file mode 100644
index 58a3e18..0000000
--- a/taverna-beanshell-activity-ui/src/main/resources/META-INF/spring/beanshell-activity-ui-context-osgi.xml
+++ /dev/null
@@ -1,29 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<beans:beans xmlns="http://www.springframework.org/schema/osgi" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-	xmlns:beans="http://www.springframework.org/schema/beans"
-	xsi:schemaLocation="http://www.springframework.org/schema/beans
-                      http://www.springframework.org/schema/beans/spring-beans.xsd
-                      http://www.springframework.org/schema/osgi
-                      http://www.springframework.org/schema/osgi/spring-osgi.xsd">
-
-	<service ref="BeanshellActivityIcon" interface="net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI" />
-
-	<service ref="BeanshellTemplateService" interface="net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider" />
-
-	<service ref="AddBeanshellTemplateAction" auto-export="interfaces" />
-	<service ref="AddBeanshellTemplateMenuAction" auto-export="interfaces" />
-	<service ref="ConfigureBeanshellMenuAction" auto-export="interfaces" />
-
-	<service ref="BeanshellActivityViewFactory" interface="net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory" />
-
-	<reference id="editManager" interface="net.sf.taverna.t2.workbench.edits.EditManager" />
-	<reference id="fileManager" interface="net.sf.taverna.t2.workbench.file.FileManager" />
-	<reference id="menuManager" interface="net.sf.taverna.t2.ui.menu.MenuManager" />
-	<reference id="selectionManager" interface="net.sf.taverna.t2.workbench.selection.SelectionManager" />
-	<reference id="activityIconManager" interface="net.sf.taverna.t2.workbench.activityicons.ActivityIconManager" />
-	<reference id="colourManager" interface="net.sf.taverna.t2.workbench.configuration.colour.ColourManager" />
-	<reference id="serviceDescriptionRegistry" interface="net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry" />
-	<reference id="serviceRegistry" interface="uk.org.taverna.commons.services.ServiceRegistry" />
-	<reference id="applicationConfiguration" interface="uk.org.taverna.configuration.app.ApplicationConfiguration" />
-
-</beans:beans>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/resources/META-INF/spring/beanshell-activity-ui-context.xml
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/resources/META-INF/spring/beanshell-activity-ui-context.xml b/taverna-beanshell-activity-ui/src/main/resources/META-INF/spring/beanshell-activity-ui-context.xml
deleted file mode 100644
index fc6d5d4..0000000
--- a/taverna-beanshell-activity-ui/src/main/resources/META-INF/spring/beanshell-activity-ui-context.xml
+++ /dev/null
@@ -1,43 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<beans xmlns="http://www.springframework.org/schema/beans" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-	xsi:schemaLocation="http://www.springframework.org/schema/beans
-                      http://www.springframework.org/schema/beans/spring-beans.xsd">
-
-	<bean id="BeanshellActivityIcon" class="net.sf.taverna.t2.activities.beanshell.servicedescriptions.BeanshellActivityIcon" />
-
-	<bean id="BeanshellTemplateService" class="net.sf.taverna.t2.activities.beanshell.servicedescriptions.BeanshellTemplateService" />
-
-	<bean id="AddBeanshellTemplateAction" class="net.sf.taverna.t2.activities.beanshell.menu.AddBeanshellTemplateAction">
-			<property name="editManager" ref="editManager" />
-			<property name="menuManager" ref="menuManager" />
-			<property name="selectionManager" ref="selectionManager" />
-			<property name="activityIconManager" ref="activityIconManager" />
-			<property name="serviceDescriptionRegistry" ref="serviceDescriptionRegistry" />
-			<property name="serviceRegistry" ref="serviceRegistry" />
-	</bean>
-	<bean id="AddBeanshellTemplateMenuAction" class="net.sf.taverna.t2.activities.beanshell.menu.AddBeanshellTemplateMenuAction">
-			<property name="editManager" ref="editManager" />
-			<property name="menuManager" ref="menuManager" />
-			<property name="selectionManager" ref="selectionManager" />
-			<property name="activityIconManager" ref="activityIconManager" />
-			<property name="serviceDescriptionRegistry" ref="serviceDescriptionRegistry" />
-			<property name="serviceRegistry" ref="serviceRegistry" />
-	</bean>
-	<bean id="ConfigureBeanshellMenuAction" class="net.sf.taverna.t2.activities.beanshell.menu.ConfigureBeanshellMenuAction">
-			<property name="editManager" ref="editManager" />
-			<property name="fileManager" ref="fileManager" />
-			<property name="activityIconManager" ref="activityIconManager" />
-			<property name="serviceDescriptionRegistry" ref="serviceDescriptionRegistry" />
-			<property name="applicationConfiguration" ref="applicationConfiguration" />
-	</bean>
-
-	<bean id="BeanshellActivityViewFactory" class="net.sf.taverna.t2.activities.beanshell.views.BeanshellActivityViewFactory">
-			<property name="editManager" ref="editManager" />
-			<property name="fileManager" ref="fileManager" />
-			<property name="activityIconManager" ref="activityIconManager" />
-			<property name="colourManager" ref="colourManager" />
-			<property name="serviceDescriptionRegistry" ref="serviceDescriptionRegistry" />
-			<property name="applicationConfiguration" ref="applicationConfiguration" />
-	</bean>
-
-</beans>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/resources/beanshell.png
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/resources/beanshell.png b/taverna-beanshell-activity-ui/src/main/resources/beanshell.png
deleted file mode 100644
index 8f6edfb..0000000
Binary files a/taverna-beanshell-activity-ui/src/main/resources/beanshell.png and /dev/null differ

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-beanshell-activity-ui/src/main/resources/net/sf/taverna/t2/activities/beanshell/views/keys.txt
----------------------------------------------------------------------
diff --git a/taverna-beanshell-activity-ui/src/main/resources/net/sf/taverna/t2/activities/beanshell/views/keys.txt b/taverna-beanshell-activity-ui/src/main/resources/net/sf/taverna/t2/activities/beanshell/views/keys.txt
deleted file mode 100644
index 15cb51b..0000000
--- a/taverna-beanshell-activity-ui/src/main/resources/net/sf/taverna/t2/activities/beanshell/views/keys.txt
+++ /dev/null
@@ -1,90 +0,0 @@
-++
---
-+
--
-~
-!
-*
-/
-%
-<<
->>
->>>
-<
->
-<=
->=
-==
-!=
-&
-^
-|
-&&
-||
-:
-=
-+=
--=
-*=
-/=
-%=
-&=
-^=
-|=
-<<=
->>=
->>>=
-=
-abstract
-assert
-boolean
-break
-byte
-case
-catch
-char
-class
-const
-continue
-default
-do
-double
-else
-enum
-extends
-false
-final
-finally
-float
-for
-goto
-if
-implements
-import
-instanceof
-int
-interface
-long
-native
-new
-null
-package
-private
-protected
-public
-return
-short
-static
-strictfp
-super
-switch
-synchronized
-this
-throw
-throws
-transient
-true
-try
-void
-volatile
-while 
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-external-tool-activity-ui/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-external-tool-activity-ui/pom.xml b/taverna-external-tool-activity-ui/pom.xml
deleted file mode 100644
index 376cd5c..0000000
--- a/taverna-external-tool-activity-ui/pom.xml
+++ /dev/null
@@ -1,108 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
-	<modelVersion>4.0.0</modelVersion>
-  <parent>
-    <groupId>net.sf.taverna</groupId>
-    <artifactId>taverna-parent</artifactId>
-    <version>3.0.1-SNAPSHOT</version>
-  </parent>
-	<groupId>net.sf.taverna.t2.ui-activities</groupId>
-	<artifactId>external-tool-activity-ui</artifactId>
-	<name>Taverna 2 ExternalTool Activity UI</name>
-	<dependencies>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>menu-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-components</groupId>
-			<artifactId>graph-view</artifactId>
-			<version>${t2.ui.components.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>activity-icons-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>activity-palette-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.activities</groupId>
-			<artifactId>wsdl-activity</artifactId>
-			<version>${t2.activities.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-impl</groupId>
-			<artifactId>contextual-views-impl</artifactId>
-			<version>${t2.ui.impl.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>contextual-views-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-components</groupId>
-			<artifactId>workflow-view</artifactId>
-			<version>${t2.ui.components.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>activity-tools</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-impl</groupId>
-			<artifactId>renderers-impl</artifactId>
-			<version>${t2.ui.impl.version}</version>
-		</dependency>
-
-		<!--  testing dependencies -->
-		<dependency>
-			<groupId>junit</groupId>
-			<artifactId>junit</artifactId>
-                        <version>${junit.version}</version>
-			<scope>test</scope>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-impl</groupId>
-			<artifactId>activity-palette-impl</artifactId>
-			<version>${t2.ui.impl.version}</version>
-			<scope>test</scope>
-		</dependency>
-
-		<!-- function dependencies for invocation -->
-		<dependency>
-			<groupId>net.sf.taverna.t2.activities</groupId>
-			<artifactId>external-tool-activity</artifactId>
-			<version>${t2.activities.version}</version>
-		</dependency>
-
-	</dependencies>
-        <repositories>
-                <repository>
-                        <releases />
-                        <snapshots>
-                                <enabled>false</enabled>
-                        </snapshots>
-                        <id>mygrid-repository</id>
-                        <name>myGrid Repository</name>
-                        <url>http://www.mygrid.org.uk/maven/repository</url>
-                </repository>
-                <repository>
-                        <releases>
-                                <enabled>false</enabled>
-                        </releases>
-                        <snapshots />
-                        <id>mygrid-snapshot-repository</id>
-                        <name>myGrid Snapshot Repository</name>
-                        <url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
-                </repository>
-        </repositories>
-</project>
-

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench-common-activities/blob/b4725724/taverna-external-tool-activity-ui/src/main/java/net/sf/taverna/t2/activities/externaltool/actions/ExternalToolActivityConfigureAction.java
----------------------------------------------------------------------
diff --git a/taverna-external-tool-activity-ui/src/main/java/net/sf/taverna/t2/activities/externaltool/actions/ExternalToolActivityConfigureAction.java b/taverna-external-tool-activity-ui/src/main/java/net/sf/taverna/t2/activities/externaltool/actions/ExternalToolActivityConfigureAction.java
deleted file mode 100644
index 398ee7c..0000000
--- a/taverna-external-tool-activity-ui/src/main/java/net/sf/taverna/t2/activities/externaltool/actions/ExternalToolActivityConfigureAction.java
+++ /dev/null
@@ -1,83 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2009 Hajo Nils Krabbenhoeft, INB, University of Luebeck
- * modified 2010 Hajo Nils Krabbenhoeft, spratpix GmbH & Co. KG
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-
-package net.sf.taverna.t2.activities.externaltool.actions;
-
-import java.awt.Frame;
-import java.awt.event.ActionEvent;
-
-import javax.swing.Action;
-
-import net.sf.taverna.t2.activities.externaltool.ExternalToolActivity;
-import net.sf.taverna.t2.activities.externaltool.ExternalToolActivityConfigurationBean;
-import net.sf.taverna.t2.activities.externaltool.views.ExternalToolConfigView;
-import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.file.FileManager;
-import net.sf.taverna.t2.workbench.ui.actions.activity.ActivityConfigurationAction;
-import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ActivityConfigurationDialog;
-
-/**
- * This class implements an ActivityConfigurationAction to configure the ExternalToolActivity
- * plugin. The configuration action is called "Configure UseCase invocation" and is implemented in
- * the KnowARCConfigurationDialog inside the knowarc-usecases maven artifact.
- *
- * @author Hajo Nils Krabbenhoeft
- */
-@SuppressWarnings("serial")
-public class ExternalToolActivityConfigureAction extends
-		ActivityConfigurationAction<ExternalToolActivity, ExternalToolActivityConfigurationBean> {
-
-	private final Frame owner;
-	private final EditManager editManager;
-	private final FileManager fileManager;
-
-	public ExternalToolActivityConfigureAction(ExternalToolActivity activity, Frame owner,
-			EditManager editManager, FileManager fileManager, ActivityIconManager activityIconManager) {
-		super(activity, activityIconManager);
-		this.editManager = editManager;
-		this.fileManager = fileManager;
-		putValue(Action.NAME, "Configure tool invocation");
-		this.owner = owner;
-	}
-
-	public void actionPerformed(ActionEvent e) {
-		/*
-		 * if (getActivity().getConfiguration() instanceof
-		 * RegisteredExternalToolActivityConfigurationBean) { new KnowARCConfigurationDialog(owner,
-		 * false, KnowARCConfigurationFactory.getConfiguration()).setVisible(true); } else
-		 */{
-			ActivityConfigurationDialog currentDialog = ActivityConfigurationAction
-					.getDialog(getActivity());
-			if (currentDialog != null) {
-				currentDialog.toFront();
-				return;
-			}
-			final ExternalToolConfigView externalToolConfigView = new ExternalToolConfigView(
-					(ExternalToolActivity) getActivity());
-			final ActivityConfigurationDialog<ExternalToolActivity, ExternalToolActivityConfigurationBean> dialog = new ActivityConfigurationDialog<ExternalToolActivity, ExternalToolActivityConfigurationBean>(
-					getActivity(), externalToolConfigView, editManager, fileManager);
-
-			ActivityConfigurationAction.setDialog(getActivity(), dialog, fileManager);
-		}
-	}
-}