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Posted to dev@airavata.apache.org by Luke Peyralans <lp...@uoregon.edu> on 2020/10/06 16:49:23 UTC
Experiment Outputs -- Display Link?
Is it possible to include a link as an experiment output? I would like to upload some experiment data to a third-party hosted service that creates interactive visualizations, and then provide a *unique link* that would let a user access these visualizations upon conclusion of the experiment.
Re: Experiment Outputs -- Display Link?
Posted by "Christie, Marcus Aaron" <ma...@iu.edu>.
Hi Luke,
I followed up with you via a separate email with a settings_local.py file you can use to setup a local Phasta Django portal dev environment.
Please use the airavata-django-portal README to get setup. Then see https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/ <https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/> for detailed documentation on creating a custom output view provider.
Let me know if you run into any issues. And yes we can definitely do a screen share if you run into issues.
Thanks,
Marcus
> On Oct 12, 2020, at 5:28 PM, Luke Peyralans <lp...@uoregon.edu> wrote:
>
> Hi Marcus, that would be awesome if I could have some help setting up a local dev env. Would you recommend I just follow the instructions on airavata-django-portal github page? If I run into issues can we do a screen share?
>
> Thank you!
>
>> On Oct 12, 2020, at 2:15 PM, Christie, Marcus Aaron <ma...@iu.edu> wrote:
>>
>> Hi Eugene,
>>
>> Yes it can. The way it works is that the custom output view is packaged as a Python package and then it can be installed into the hosted Django portal virtual environment.
>>
>> See https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/ <https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/> for more details.
>>
>> I can also help you setup a local development environment that mirrors phasta.scigap.org <http://phasta.scigap.org/> so you can quickly iterate on the custom output view.
>>
>>
>> - Marcus
>>
>>
>>> On Oct 9, 2020, at 5:14 PM, Eugene Walker <eugenesunsetwalker@gmail.com <ma...@gmail.com>> wrote:
>>>
>>> Can this be utilized on the airavata hosted service, ie phasta.scigap.org <http://phasta.scigap.org/> ?
>>>
>>>> On Oct 9, 2020, at 1:49 PM, Christie, Marcus Aaron <machrist@iu.edu <ma...@iu.edu>> wrote:
>>>>
>>>> Hi Luke,
>>>>
>>>> Not as an Airavata output, but our Django Portal supports a link type custom output view. [1] Essentially this involves creating a Python function that takes the experiment metadata and the output file and returns a label and a URL.
>>>>
>>>> Let me know if you have any questions.
>>>>
>>>> Thanks,
>>>>
>>>> Marcus
>>>>
>>>> [1] https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/#display-type-link <https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/#display-type-link>
>>>>
>>>>> On Oct 6, 2020, at 12:49 PM, Luke Peyralans <lpeyrala@uoregon.edu <ma...@uoregon.edu>> wrote:
>>>>>
>>>>> Is it possible to include a link as an experiment output? I would like to upload some experiment data to a third-party hosted service that creates interactive visualizations, and then provide a *unique link* that would let a user access these visualizations upon conclusion of the experiment.
>>>>
>>
Re: Experiment Outputs -- Display Link?
Posted by Luke Peyralans <lp...@uoregon.edu>.
Hi Marcus, that would be awesome if I could have some help setting up a local dev env. Would you recommend I just follow the instructions on airavata-django-portal github page? If I run into issues can we do a screen share?
Thank you!
On Oct 12, 2020, at 2:15 PM, Christie, Marcus Aaron <ma...@iu.edu> wrote:
Hi Eugene,
Yes it can. The way it works is that the custom output view is packaged as a Python package and then it can be installed into the hosted Django portal virtual environment.
See https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/ for more details.
I can also help you setup a local development environment that mirrors phasta.scigap.org<http://phasta.scigap.org> so you can quickly iterate on the custom output view.
- Marcus
On Oct 9, 2020, at 5:14 PM, Eugene Walker <eu...@gmail.com>> wrote:
Can this be utilized on the airavata hosted service, ie phasta.scigap.org<http://phasta.scigap.org> ?
On Oct 9, 2020, at 1:49 PM, Christie, Marcus Aaron <ma...@iu.edu>> wrote:
Hi Luke,
Not as an Airavata output, but our Django Portal supports a link type custom output view. [1] Essentially this involves creating a Python function that takes the experiment metadata and the output file and returns a label and a URL.
Let me know if you have any questions.
Thanks,
Marcus
[1] https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/#display-type-link
On Oct 6, 2020, at 12:49 PM, Luke Peyralans <lp...@uoregon.edu>> wrote:
Is it possible to include a link as an experiment output? I would like to upload some experiment data to a third-party hosted service that creates interactive visualizations, and then provide a *unique link* that would let a user access these visualizations upon conclusion of the experiment.
Re: Experiment Outputs -- Display Link?
Posted by "Christie, Marcus Aaron" <ma...@iu.edu>.
Hi Eugene,
Yes it can. The way it works is that the custom output view is packaged as a Python package and then it can be installed into the hosted Django portal virtual environment.
See https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/ <https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/> for more details.
I can also help you setup a local development environment that mirrors phasta.scigap.org <http://phasta.scigap.org/> so you can quickly iterate on the custom output view.
- Marcus
> On Oct 9, 2020, at 5:14 PM, Eugene Walker <eu...@gmail.com> wrote:
>
> Can this be utilized on the airavata hosted service, ie phasta.scigap.org ?
>
>> On Oct 9, 2020, at 1:49 PM, Christie, Marcus Aaron <ma...@iu.edu> wrote:
>>
>> Hi Luke,
>>
>> Not as an Airavata output, but our Django Portal supports a link type custom output view. [1] Essentially this involves creating a Python function that takes the experiment metadata and the output file and returns a label and a URL.
>>
>> Let me know if you have any questions.
>>
>> Thanks,
>>
>> Marcus
>>
>> [1] https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/#display-type-link <https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/#display-type-link>
>>
>>> On Oct 6, 2020, at 12:49 PM, Luke Peyralans <lpeyrala@uoregon.edu <ma...@uoregon.edu>> wrote:
>>>
>>> Is it possible to include a link as an experiment output? I would like to upload some experiment data to a third-party hosted service that creates interactive visualizations, and then provide a *unique link* that would let a user access these visualizations upon conclusion of the experiment.
>>
Re: Experiment Outputs -- Display Link?
Posted by Eugene Walker <eu...@gmail.com>.
Can this be utilized on the airavata hosted service, ie phasta.scigap.org ?
> On Oct 9, 2020, at 1:49 PM, Christie, Marcus Aaron <ma...@iu.edu> wrote:
>
> Hi Luke,
>
> Not as an Airavata output, but our Django Portal supports a link type custom output view. [1] Essentially this involves creating a Python function that takes the experiment metadata and the output file and returns a label and a URL.
>
> Let me know if you have any questions.
>
> Thanks,
>
> Marcus
>
> [1] https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/#display-type-link
>
>> On Oct 6, 2020, at 12:49 PM, Luke Peyralans <lp...@uoregon.edu> wrote:
>>
>> Is it possible to include a link as an experiment output? I would like to upload some experiment data to a third-party hosted service that creates interactive visualizations, and then provide a *unique link* that would let a user access these visualizations upon conclusion of the experiment.
>
Re: Experiment Outputs -- Display Link?
Posted by "Christie, Marcus Aaron" <ma...@iu.edu>.
Hi Luke,
Not as an Airavata output, but our Django Portal supports a link type custom output view. [1] Essentially this involves creating a Python function that takes the experiment metadata and the output file and returns a label and a URL.
Let me know if you have any questions.
Thanks,
Marcus
[1] https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/custom_output_view_provider/#display-type-link
> On Oct 6, 2020, at 12:49 PM, Luke Peyralans <lp...@uoregon.edu> wrote:
>
> Is it possible to include a link as an experiment output? I would like to upload some experiment data to a third-party hosted service that creates interactive visualizations, and then provide a *unique link* that would let a user access these visualizations upon conclusion of the experiment.