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Posted to reviews@spark.apache.org by windpiger <gi...@git.apache.org> on 2017/02/07 15:17:01 UTC
[GitHub] spark pull request #16834: [WIP][SPARK-19488][SQL]fix csv infer schema when ...
GitHub user windpiger opened a pull request:
https://github.com/apache/spark/pull/16834
[WIP][SPARK-19488][SQL]fix csv infer schema when the field is Nan/Inf etc
## What changes were proposed in this pull request?
when csv infer schema, it does not use user defined csvoptions to parse the field, such as `inf`, `-inf` which are should be parsed to DoubleType
this pr add `options.nanValue`, `options.negativeInf`, `options.positiveIn` to check if the field is a DoubleType
## How was this patch tested?
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/windpiger/spark fixinferInfSchemaCsv
Alternatively you can review and apply these changes as the patch at:
https://github.com/apache/spark/pull/16834.patch
To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:
This closes #16834
----
commit 1e181bc12652f531a979ac32bafcd0a8f967d33e
Author: windpiger <so...@outlook.com>
Date: 2017-02-07T15:05:22Z
[WIP][SPARK-19488][SQL]fix csv infer schema when the field is Nan/Inf etc
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[GitHub] spark pull request #16834: [SPARK-19488][SQL]fix csv infer schema when the f...
Posted by windpiger <gi...@git.apache.org>.
Github user windpiger commented on a diff in the pull request:
https://github.com/apache/spark/pull/16834#discussion_r99984340
--- Diff: sql/core/src/main/scala/org/apache/spark/sql/execution/datasources/csv/CSVInferSchema.scala ---
@@ -98,6 +98,11 @@ private[csv] object CSVInferSchema {
}
}
+ private def isInfOrNan(field: String, options: CSVOptions): Boolean = {
+ val infOrNan = Seq(options.nanValue, options.negativeInf, options.positiveInf)
+ infOrNan.contains(field)
--- End diff --
ok, thanks~
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by HyukjinKwon <gi...@git.apache.org>.
Github user HyukjinKwon commented on the issue:
https://github.com/apache/spark/pull/16834
I am sorry, I missed this comment. Let me please take a look too.
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[GitHub] spark issue #16834: [WIP][SPARK-19488][SQL]fix csv infer schema when the fie...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/16834
**[Test build #72509 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/72509/testReport)** for PR 16834 at commit [`8ac2baf`](https://github.com/apache/spark/commit/8ac2baf0b4cd5d4b973f7f8db15affde1938c881).
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[GitHub] spark pull request #16834: [SPARK-19488][SQL]fix csv infer schema when the f...
Posted by cloud-fan <gi...@git.apache.org>.
Github user cloud-fan commented on a diff in the pull request:
https://github.com/apache/spark/pull/16834#discussion_r99980603
--- Diff: sql/core/src/main/scala/org/apache/spark/sql/execution/datasources/csv/CSVInferSchema.scala ---
@@ -98,6 +98,11 @@ private[csv] object CSVInferSchema {
}
}
+ private def isInfOrNan(field: String, options: CSVOptions): Boolean = {
+ val infOrNan = Seq(options.nanValue, options.negativeInf, options.positiveInf)
--- End diff --
use `Set`?
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by AmplabJenkins <gi...@git.apache.org>.
Github user AmplabJenkins commented on the issue:
https://github.com/apache/spark/pull/16834
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by cloud-fan <gi...@git.apache.org>.
Github user cloud-fan commented on the issue:
https://github.com/apache/spark/pull/16834
LGTM except 2 minor comments
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/16834
**[Test build #72513 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/72513/testReport)** for PR 16834 at commit [`e0481f4`](https://github.com/apache/spark/commit/e0481f4c8bd5a0634f18e2ff9aa01cd7f2912108).
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
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[GitHub] spark pull request #16834: [SPARK-19488][SQL]fix csv infer schema when the f...
Posted by cloud-fan <gi...@git.apache.org>.
Github user cloud-fan commented on a diff in the pull request:
https://github.com/apache/spark/pull/16834#discussion_r99981337
--- Diff: sql/core/src/test/scala/org/apache/spark/sql/execution/datasources/csv/CSVInferSchemaSuite.scala ---
@@ -131,4 +131,13 @@ class CSVInferSchemaSuite extends SparkFunSuite {
assert(CSVInferSchema.inferField(DecimalType(20, 0), "2015-12-01 00:00:00", options)
== StringType)
}
+
+ test("DoubleType should be infered when user defined nanValue/negativeInf/positiveInf" +
--- End diff --
we can use shorthand `nan/inf`, so that the test name can fit in one line
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[GitHub] spark pull request #16834: [SPARK-19488][SQL]fix csv infer schema when the f...
Posted by cloud-fan <gi...@git.apache.org>.
Github user cloud-fan commented on a diff in the pull request:
https://github.com/apache/spark/pull/16834#discussion_r99981067
--- Diff: sql/core/src/main/scala/org/apache/spark/sql/execution/datasources/csv/CSVInferSchema.scala ---
@@ -98,6 +98,11 @@ private[csv] object CSVInferSchema {
}
}
+ private def isInfOrNan(field: String, options: CSVOptions): Boolean = {
+ val infOrNan = Seq(options.nanValue, options.negativeInf, options.positiveInf)
+ infOrNan.contains(field)
--- End diff --
`field == options.nanValue || field == options.negativeInf || ...`, to avoid creating a seq many times
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/16834
**[Test build #72552 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/72552/testReport)** for PR 16834 at commit [`452df9d`](https://github.com/apache/spark/commit/452df9dcc8be46bbd5fba8fb84efa7d673415a92).
* This patch passes all tests.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
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https://github.com/apache/spark/pull/16834
**[Test build #72513 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/72513/testReport)** for PR 16834 at commit [`e0481f4`](https://github.com/apache/spark/commit/e0481f4c8bd5a0634f18e2ff9aa01cd7f2912108).
* This patch passes all tests.
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* This patch adds no public classes.
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by cloud-fan <gi...@git.apache.org>.
Github user cloud-fan commented on the issue:
https://github.com/apache/spark/pull/16834
cc @HyukjinKwon
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https://github.com/apache/spark/pull/16834
**[Test build #72508 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/72508/testReport)** for PR 16834 at commit [`1e181bc`](https://github.com/apache/spark/commit/1e181bc12652f531a979ac32bafcd0a8f967d33e).
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by cloud-fan <gi...@git.apache.org>.
Github user cloud-fan commented on the issue:
https://github.com/apache/spark/pull/16834
thanks, merging to master!
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by SparkQA <gi...@git.apache.org>.
Github user SparkQA commented on the issue:
https://github.com/apache/spark/pull/16834
**[Test build #72509 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/72509/testReport)** for PR 16834 at commit [`8ac2baf`](https://github.com/apache/spark/commit/8ac2baf0b4cd5d4b973f7f8db15affde1938c881).
* This patch passes all tests.
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* This patch adds no public classes.
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
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https://github.com/apache/spark/pull/16834
**[Test build #72552 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/72552/testReport)** for PR 16834 at commit [`452df9d`](https://github.com/apache/spark/commit/452df9dcc8be46bbd5fba8fb84efa7d673415a92).
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[GitHub] spark pull request #16834: [SPARK-19488][SQL]fix csv infer schema when the f...
Posted by asfgit <gi...@git.apache.org>.
Github user asfgit closed the pull request at:
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by SparkQA <gi...@git.apache.org>.
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https://github.com/apache/spark/pull/16834
**[Test build #72508 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/72508/testReport)** for PR 16834 at commit [`1e181bc`](https://github.com/apache/spark/commit/1e181bc12652f531a979ac32bafcd0a8f967d33e).
* This patch passes all tests.
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* This patch adds no public classes.
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
Posted by HyukjinKwon <gi...@git.apache.org>.
Github user HyukjinKwon commented on the issue:
https://github.com/apache/spark/pull/16834
LGTM too as I manually checked out and ran some end-to-end tests.
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[GitHub] spark issue #16834: [SPARK-19488][SQL]fix csv infer schema when the field is...
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