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Posted to dev@ctakes.apache.org by Pei Chen <ch...@apache.org> on 2014/12/01 21:20:59 UTC
[VOTE] Release Apache cTAKES 3.2.1 (rc2)
This is a call for a vote on releasing the following candidate (rc2) as
Apache cTAKES 3.2.1.
The major changes include:
- New optional Temporal component (Time + Event Relationships models now
available)
- Other bug fixes/enhancements from Jira
I manually downloaded the bin as well as resources and tried the CVD with
the AggregatePlaintextFastUMLSProcessor.xml and
AggregatePlaintextUMLSProcessor.xml.
Would be great if folks have time to test/verify especially if you opened
any of the Jira's below to ensure the bugs have been fixed/integrated.
For more detailed information on the changes/release notes, please visit:
https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621&version=12326778
The release was made using the cTAKES release process documented here:
http://ctakes.apache.org/ctakes-release-guide.html
The candidate is available at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz
/.zip
The tag to be voted on:
http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.1-rc2
The MD5 checksum of the tarball can be found at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.md5
/.zip.md5
The signature of the tarball can be found at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.asc
/.zip.asc
Apache cTAKES' KEYS file, containing the PGP keys used to sign the release:
https://dist.apache.org/repos/dist/release/ctakes/KEYS
Please vote on releasing these packages as Apache cTAKES 3.2.1. The vote is
open for at least the next 72 hours.
The vote passes if at least three binding +1 votes are cast.
[ ] +1 Release the packages as Apache cTAKES 3.2.1
[ ] -1 Do not release the packages because...
Also, the convenience binary can be found at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-bin.tar.gz.md5
/.zip
Thanks!
Re: [VOTE] Release Apache cTAKES 3.2.1 (rc2)
Posted by Pei Chen <ch...@apache.org>.
Barbara,
To unsubscribe –
Send an plaintext email to user-unsubscribe@ctakes.apache.org from that
address.
(If you do not have access, I can see if I can manually remove it for you.)
http://ctakes.apache.org/mailing-lists.html
On Mon, Dec 1, 2014 at 3:29 PM, Barbara Biers <bb...@dataskill.com> wrote:
> Do you know how I can get the email address of Robert Cass at
> rcass@dataskill.com off your list? Mr. Cass is no longer with DataSkill.
>
>
>
>
>
> Thank you,
>
> Barbara Biers
>
> Operations Manager
>
> DataSkill, Inc.
>
> 5675 Ruffin Road, Suite 100
>
> San Diego, CA 92123
>
> www.dataskill.com
>
> (858) 755-3800
>
> Fax 755-3282
>
>
>
> Please consider the environment before printing.
>
> *This electronic mail message (and any attachments hereto) are for the
> sole use of the intended recipient(s) and may contain confidential and
> privileged information. Any unauthorized review, use, disclosure or
> distribution is prohibited. If you are not the intended recipient, please
> contact the sender by reply e-mail and destroy all copies of the original
> message (and any attachments thereto). Thank you.*
>
>
>
>
>
>
>
> *From:* Pei Chen [mailto:chenpei@apache.org]
> *Sent:* Monday, December 01, 2014 12:21 PM
> *To:* dev@ctakes.apache.org; user@ctakes.apache.org
> *Subject:* [VOTE] Release Apache cTAKES 3.2.1 (rc2)
>
>
>
> This is a call for a vote on releasing the following candidate (rc2) as
> Apache cTAKES 3.2.1.
>
> The major changes include:
>
> - New optional Temporal component (Time + Event Relationships models now
> available)
>
> - Other bug fixes/enhancements from Jira
>
> I manually downloaded the bin as well as resources and tried the CVD with
> the AggregatePlaintextFastUMLSProcessor.xml and
> AggregatePlaintextUMLSProcessor.xml.
>
> Would be great if folks have time to test/verify especially if you opened
> any of the Jira's below to ensure the bugs have been fixed/integrated.
>
>
>
>
>
> For more detailed information on the changes/release notes, please visit:
>
>
> https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621&version=12326778
>
> The release was made using the cTAKES release process documented here:
> http://ctakes.apache.org/ctakes-release-guide.html
>
> The candidate is available at:
> https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz
> /.zip
>
> The tag to be voted on:
> http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.1-rc2
>
> The MD5 checksum of the tarball can be found at:
> https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.md5
>
> /.zip.md5
>
> The signature of the tarball can be found at:
>
> https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.asc
> /.zip.asc
>
> Apache cTAKES' KEYS file, containing the PGP keys used to sign the
> release:
> https://dist.apache.org/repos/dist/release/ctakes/KEYS
>
> Please vote on releasing these packages as Apache cTAKES 3.2.1. The vote
> is open for at least the next 72 hours.
>
> The vote passes if at least three binding +1 votes are cast.
> [ ] +1 Release the packages as Apache cTAKES 3.2.1
> [ ] -1 Do not release the packages because...
>
> Also, the convenience binary can be found at:
>
> https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-bin.tar.gz.md5
> /.zip
>
> Thanks!
>
RE: [VOTE] Release Apache cTAKES 3.2.1 (rc2)
Posted by Barbara Biers <bb...@dataskill.com>.
Do you know how I can get the email address of Robert Cass at rcass@dataskill.com<ma...@dataskill.com> off your list? Mr. Cass is no longer with DataSkill.
Thank you,
Barbara Biers
Operations Manager
DataSkill, Inc.
5675 Ruffin Road, Suite 100
San Diego, CA 92123
www.dataskill.com<http://www.dataskill.com/>
(858) 755-3800
Fax 755-3282
Please consider the environment before printing.
This electronic mail message (and any attachments hereto) are for the sole use of the intended recipient(s) and may contain confidential and privileged information. Any unauthorized review, use, disclosure or distribution is prohibited. If you are not the intended recipient, please contact the sender by reply e-mail and destroy all copies of the original message (and any attachments thereto). Thank you.
From: Pei Chen [mailto:chenpei@apache.org]
Sent: Monday, December 01, 2014 12:21 PM
To: dev@ctakes.apache.org; user@ctakes.apache.org
Subject: [VOTE] Release Apache cTAKES 3.2.1 (rc2)
This is a call for a vote on releasing the following candidate (rc2) as Apache cTAKES 3.2.1.
The major changes include:
- New optional Temporal component (Time + Event Relationships models now available)
- Other bug fixes/enhancements from Jira
I manually downloaded the bin as well as resources and tried the CVD with the AggregatePlaintextFastUMLSProcessor.xml and AggregatePlaintextUMLSProcessor.xml.
Would be great if folks have time to test/verify especially if you opened any of the Jira's below to ensure the bugs have been fixed/integrated.
For more detailed information on the changes/release notes, please visit:
https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621&version=12326778
The release was made using the cTAKES release process documented here:
http://ctakes.apache.org/ctakes-release-guide.html
The candidate is available at: https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz
/.zip
The tag to be voted on: http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.1-rc2
The MD5 checksum of the tarball can be found at: https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.md5
/.zip.md5
The signature of the tarball can be found at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.asc
/.zip.asc
Apache cTAKES' KEYS file, containing the PGP keys used to sign the release:
https://dist.apache.org/repos/dist/release/ctakes/KEYS
Please vote on releasing these packages as Apache cTAKES 3.2.1. The vote is open for at least the next 72 hours.
The vote passes if at least three binding +1 votes are cast.
[ ] +1 Release the packages as Apache cTAKES 3.2.1
[ ] -1 Do not release the packages because...
Also, the convenience binary can be found at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-bin.tar.gz.md5
/.zip
Thanks!
Re: [VOTE] Release Apache cTAKES 3.2.1 (rc2)
Posted by "Miller, Timothy" <Ti...@childrens.harvard.edu>.
Yep, sounds like a plan.
+1 from me!
Tim
On 12/05/2014 11:20 AM, Chen, Pei wrote:
> Thanks for testing Tim.
> I don't think AggregatePlaintextProcessor.xml (w/o UMLS) does much actually. We can fix the descriptor xml in the next patch irrespective [1].
> I updated the documentation[2] to say
> - if you want something simple to test, try the SentencesAndTokensAggregate.xml in the meantime.
> - default to AggregatePlaintextFastUMLSProcessor.xml
> - made UMLS 'Recommended' rather than 'Optional'. Otherwise, you'll just have a dictionary with 5 dummy terms.
>
> [1] https://issues.apache.org/jira/browse/CTAKES-340
> [2] https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.2
>
>
>
> -----Original Message-----
> From: Miller, Timothy [mailto:Timothy.Miller@childrens.harvard.edu]
> Sent: Thursday, December 04, 2014 9:34 AM
> To: dev@ctakes.apache.org
> Subject: Re: [VOTE] Release Apache cTAKES 3.2.1 (rc2)
>
> I downloaded the src and bin and did the following (in xubuntu):
>
> * Compiled src from command line using mvn compile
> * Ran fast dictionary pipeline in src package (using mvn compile -P runCVD) -- required setting umls user & password in dictionary descriptor
> * Extracted resources into bin release and successfully ran runCVD.sh -- require setting umls user & password in dictionary descriptor
>
> There was one issue with the non-UMLS pipeline -- was missing a close bracket in the descriptor xml. Added it back in and it worked fine. Is there a way to just patch that file w/o re-doing the whole RC?
>
> Tim
>
>
> On 12/01/2014 03:21 PM, Pei Chen wrote:
>
> This is a call for a vote on releasing the following candidate (rc2) as Apache cTAKES 3.2.1.
>
> The major changes include:
>
> - New optional Temporal component (Time + Event Relationships models now available)
>
> - Other bug fixes/enhancements from Jira
>
> I manually downloaded the bin as well as resources and tried the CVD with the AggregatePlaintextFastUMLSProcessor.xml and AggregatePlaintextUMLSProcessor.xml.
> Would be great if folks have time to test/verify especially if you opened any of the Jira's below to ensure the bugs have been fixed/integrated.
>
>
> For more detailed information on the changes/release notes, please visit:
>
> https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621&version=12326778
>
> The release was made using the cTAKES release process documented here:
> http://ctakes.apache.org/ctakes-release-guide.html
>
> The candidate is available at: https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz
> /.zip
>
> The tag to be voted on: http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.1-rc2
>
> The MD5 checksum of the tarball can be found at: https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.md5
>
> /.zip.md5
>
> The signature of the tarball can be found at:
> https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.asc
> /.zip.asc
>
> Apache cTAKES' KEYS file, containing the PGP keys used to sign the release:
> https://dist.apache.org/repos/dist/release/ctakes/KEYS
>
> Please vote on releasing these packages as Apache cTAKES 3.2.1. The vote is open for at least the next 72 hours.
>
> The vote passes if at least three binding +1 votes are cast.
> [ ] +1 Release the packages as Apache cTAKES 3.2.1 [ ] -1 Do not release the packages because...
>
> Also, the convenience binary can be found at:
> https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-bin.tar.gz.md5
> /.zip
>
> Thanks!
>
>
RE: [VOTE] Release Apache cTAKES 3.2.1 (rc2)
Posted by "Chen, Pei" <Pe...@childrens.harvard.edu>.
Thanks for testing Tim.
I don't think AggregatePlaintextProcessor.xml (w/o UMLS) does much actually. We can fix the descriptor xml in the next patch irrespective [1].
I updated the documentation[2] to say
- if you want something simple to test, try the SentencesAndTokensAggregate.xml in the meantime.
- default to AggregatePlaintextFastUMLSProcessor.xml
- made UMLS 'Recommended' rather than 'Optional'. Otherwise, you'll just have a dictionary with 5 dummy terms.
[1] https://issues.apache.org/jira/browse/CTAKES-340
[2] https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.2
-----Original Message-----
From: Miller, Timothy [mailto:Timothy.Miller@childrens.harvard.edu]
Sent: Thursday, December 04, 2014 9:34 AM
To: dev@ctakes.apache.org
Subject: Re: [VOTE] Release Apache cTAKES 3.2.1 (rc2)
I downloaded the src and bin and did the following (in xubuntu):
* Compiled src from command line using mvn compile
* Ran fast dictionary pipeline in src package (using mvn compile -P runCVD) -- required setting umls user & password in dictionary descriptor
* Extracted resources into bin release and successfully ran runCVD.sh -- require setting umls user & password in dictionary descriptor
There was one issue with the non-UMLS pipeline -- was missing a close bracket in the descriptor xml. Added it back in and it worked fine. Is there a way to just patch that file w/o re-doing the whole RC?
Tim
On 12/01/2014 03:21 PM, Pei Chen wrote:
This is a call for a vote on releasing the following candidate (rc2) as Apache cTAKES 3.2.1.
The major changes include:
- New optional Temporal component (Time + Event Relationships models now available)
- Other bug fixes/enhancements from Jira
I manually downloaded the bin as well as resources and tried the CVD with the AggregatePlaintextFastUMLSProcessor.xml and AggregatePlaintextUMLSProcessor.xml.
Would be great if folks have time to test/verify especially if you opened any of the Jira's below to ensure the bugs have been fixed/integrated.
For more detailed information on the changes/release notes, please visit:
https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621&version=12326778
The release was made using the cTAKES release process documented here:
http://ctakes.apache.org/ctakes-release-guide.html
The candidate is available at: https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz
/.zip
The tag to be voted on: http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.1-rc2
The MD5 checksum of the tarball can be found at: https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.md5
/.zip.md5
The signature of the tarball can be found at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.asc
/.zip.asc
Apache cTAKES' KEYS file, containing the PGP keys used to sign the release:
https://dist.apache.org/repos/dist/release/ctakes/KEYS
Please vote on releasing these packages as Apache cTAKES 3.2.1. The vote is open for at least the next 72 hours.
The vote passes if at least three binding +1 votes are cast.
[ ] +1 Release the packages as Apache cTAKES 3.2.1 [ ] -1 Do not release the packages because...
Also, the convenience binary can be found at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-bin.tar.gz.md5
/.zip
Thanks!
Re: [VOTE] Release Apache cTAKES 3.2.1 (rc2)
Posted by "Miller, Timothy" <Ti...@childrens.harvard.edu>.
I downloaded the src and bin and did the following (in xubuntu):
* Compiled src from command line using mvn compile
* Ran fast dictionary pipeline in src package (using mvn compile -P runCVD) -- required setting umls user & password in dictionary descriptor
* Extracted resources into bin release and successfully ran runCVD.sh -- require setting umls user & password in dictionary descriptor
There was one issue with the non-UMLS pipeline -- was missing a close bracket in the descriptor xml. Added it back in and it worked fine. Is there a way to just patch that file w/o re-doing the whole RC?
Tim
On 12/01/2014 03:21 PM, Pei Chen wrote:
This is a call for a vote on releasing the following candidate (rc2) as Apache cTAKES 3.2.1.
The major changes include:
- New optional Temporal component (Time + Event Relationships models now available)
- Other bug fixes/enhancements from Jira
I manually downloaded the bin as well as resources and tried the CVD with the AggregatePlaintextFastUMLSProcessor.xml and AggregatePlaintextUMLSProcessor.xml.
Would be great if folks have time to test/verify especially if you opened any of the Jira's below to ensure the bugs have been fixed/integrated.
For more detailed information on the changes/release notes, please visit:
https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621&version=12326778
The release was made using the cTAKES release process documented here:
http://ctakes.apache.org/ctakes-release-guide.html
The candidate is available at: https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz
/.zip
The tag to be voted on: http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.1-rc2
The MD5 checksum of the tarball can be found at: https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.md5
/.zip.md5
The signature of the tarball can be found at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-src.tar.gz.asc
/.zip.asc
Apache cTAKES' KEYS file, containing the PGP keys used to sign the release:
https://dist.apache.org/repos/dist/release/ctakes/KEYS
Please vote on releasing these packages as Apache cTAKES 3.2.1. The vote is open for at least the next 72 hours.
The vote passes if at least three binding +1 votes are cast.
[ ] +1 Release the packages as Apache cTAKES 3.2.1
[ ] -1 Do not release the packages because...
Also, the convenience binary can be found at:
https://dist.apache.org/repos/dist/dev/ctakes/ctakes-3.2.1-rc2/apache-ctakes-3.2.1-bin.tar.gz.md5
/.zip
Thanks!