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Posted to issues@beam.apache.org by "Brian Hulette (Jira)" <ji...@apache.org> on 2020/08/10 15:49:00 UTC
[jira] [Updated] (BEAM-10513) Failure / flake: Repeated deadlock in
JdbcIOTest > testCustomFluentBackOffConfiguration
[ https://issues.apache.org/jira/browse/BEAM-10513?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Brian Hulette updated BEAM-10513:
---------------------------------
Status: Resolved (was: Triage Needed)
> Failure / flake: Repeated deadlock in JdbcIOTest > testCustomFluentBackOffConfiguration
> ---------------------------------------------------------------------------------------
>
> Key: BEAM-10513
> URL: https://issues.apache.org/jira/browse/BEAM-10513
> Project: Beam
> Issue Type: Bug
> Components: io-java-jdbc
> Reporter: Kenneth Knowles
> Priority: P1
> Labels: flake
>
> https://ci-beam.apache.org/job/beam_PreCommit_Java_Commit/12405/testReport/junit/org.apache.beam.sdk.io.jdbc/JdbcIOTest/testCustomFluentBackOffConfiguration/
> Failure:
> {code}
> java.sql.SQLTransactionRollbackException: A lock could not be obtained within the time requested
> at org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
> at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown Source)
> at org.apache.derby.impl.jdbc.TransactionResourceImpl.wrapInSQLException(Unknown Source)
> at org.apache.derby.impl.jdbc.TransactionResourceImpl.handleException(Unknown Source)
> at org.apache.derby.impl.jdbc.EmbedConnection.handleException(Unknown Source)
> at org.apache.derby.impl.jdbc.ConnectionChild.handleException(Unknown Source)
> at org.apache.derby.impl.jdbc.EmbedStatement.executeStatement(Unknown Source)
> at org.apache.derby.impl.jdbc.EmbedStatement.execute(Unknown Source)
> at org.apache.derby.impl.jdbc.EmbedStatement.executeQuery(Unknown Source)
> at org.apache.commons.dbcp2.DelegatingStatement.executeQuery(DelegatingStatement.java:310)
> at org.apache.commons.dbcp2.DelegatingStatement.executeQuery(DelegatingStatement.java:310)
> at org.apache.beam.sdk.io.jdbc.JdbcIOTest.assertRowCount(JdbcIOTest.java:399)
> at org.apache.beam.sdk.io.jdbc.JdbcIOTest.testCustomFluentBackOffConfiguration(JdbcIOTest.java:908)
> ...
> Caused by: ERROR 40XL1: A lock could not be obtained within the time requested
> at org.apache.derby.iapi.error.StandardException.newException(Unknown Source)
> at org.apache.derby.iapi.error.StandardException.newException(Unknown Source)
> at org.apache.derby.impl.services.locks.ConcurrentLockSet.lockObject(Unknown Source)
> at org.apache.derby.impl.services.locks.AbstractPool.lockObject(Unknown Source)
> at org.apache.derby.impl.services.locks.ConcurrentPool.lockObject(Unknown Source)
> at org.apache.derby.impl.store.raw.xact.ContainerLocking2.lockContainer(Unknown Source)
> at org.apache.derby.impl.store.raw.data.BaseContainerHandle.useContainer(Unknown Source)
> at org.apache.derby.impl.store.raw.data.BaseDataFileFactory.openContainer(Unknown Source)
> at org.apache.derby.impl.store.raw.data.BaseDataFileFactory.openContainer(Unknown Source)
> at org.apache.derby.impl.store.raw.xact.Xact.openContainer(Unknown Source)
> {code}
> And in the logs we see:
> {code}
> Jul 16, 2020 10:39:11 AM org.apache.beam.sdk.io.jdbc.JdbcIO$WriteVoid$WriteFn executeBatch
> WARNING: Deadlock detected, retrying
> java.sql.BatchUpdateException: A lock could not be obtained within the time requested
> at org.apache.derby.impl.jdbc.EmbedStatement.executeLargeBatch(Unknown Source)
> at org.apache.derby.impl.jdbc.EmbedStatement.executeBatch(Unknown Source)
> at org.apache.commons.dbcp2.DelegatingStatement.executeBatch(DelegatingStatement.java:223)
> at org.apache.commons.dbcp2.DelegatingStatement.executeBatch(DelegatingStatement.java:223)
> at org.apache.beam.sdk.io.jdbc.JdbcIO$WriteVoid$WriteFn.executeBatch(JdbcIO.java:1467)
> at org.apache.beam.sdk.io.jdbc.JdbcIO$WriteVoid$WriteFn.finishBundle(JdbcIO.java:1417)
> at org.apache.beam.sdk.io.jdbc.JdbcIO$WriteVoid$WriteFn$DoFnInvoker.invokeFinishBundle(Unknown Source)
> at org.apache.beam.repackaged.direct_java.runners.core.SimpleDoFnRunner.finishBundle(SimpleDoFnRunner.java:237)
> at org.apache.beam.repackaged.direct_java.runners.core.SimplePushbackSideInputDoFnRunner.finishBundle(SimplePushbackSideInputDoFnRunner.java:124)
> at org.apache.beam.runners.direct.ParDoEvaluator.finishBundle(ParDoEvaluator.java:265)
> at org.apache.beam.runners.direct.DoFnLifecycleManagerRemovingTransformEvaluator.finishBundle(DoFnLifecycleManagerRemovingTransformEvaluator.java:73)
> at org.apache.beam.runners.direct.DirectTransformExecutor.finishBundle(DirectTransformExecutor.java:188)
> at org.apache.beam.runners.direct.DirectTransformExecutor.run(DirectTransformExecutor.java:126)
> {code}
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