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Posted to user@ctakes.apache.org by "Morse, Richard E.,MGH" <RE...@mgh.harvard.edu> on 2015/05/14 18:00:31 UTC
Error with UMLS authorization?
Hi! I’m looking at cTAKES to help us with an abstraction problem. I downloaded the 3.2.1 install, and followed the instructions in the 3.2 User Install Guide to the best of my ability, and I’ve run into a problem.
I have applied for a UMLS username and password, and having received them, I added them to the `runctakesCVD.sh` file. (I’m running Mac OS X 10.10, Java 8.) When I try to process the sample provided in the user guide, I get the error:
14 May 2015 11:41:16 ERROR UmlsUserApprover - UMLS Account at https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser is not valid for user ***** with *****
(credentials obscured)
I have verified the user name and password in several ways (using copy and paste, logging into the website, and then running the query directly against https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser with the (copied and pasted from the `runctakesCVD.sh` file)). According to all the ways I can verify, the account is active.
Has anyone run into this? Is there something that I’m missing?
Thanks,
Ricky
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Re: Error with UMLS authorization?
Posted by Pablo Reynoso <ju...@hotmail.com>.
Hello good night Richard, I read about your trouble, I don't know if you have
it fixed right now. But check: crakes_home/bin the files runctakesCPE and
runctakesCVD, have you enter your username and password?, If not,
entered as the user crakes installation says, If you already have it,
check they are correct and verify if you leave this < > symbols, I'm
just configuring this, and the symbols thing happened to me,
after I take them away, It stars working. Right know I having
troubles with this file "UmlsLookupAnnotator.xml" don't allow
me to load AE "AggregatePlainTextFastUMLSProcessor.xml"
Re: Error with UMLS authorization?
Posted by Bruce Tietjen <br...@perfectsearchcorp.com>.
I'm not directly involved in the release process. The call for votes went
out yesterday and indicated it would be open for at least 72 hours from
when the email went out.
Bruce
[image: IMAT Solutions] <http://imatsolutions.com>
Bruce Tietjen
Senior Software Engineer
[image: Mobile:] 801.634.1547
bruce.tietjen@imatsolutions.com
On Thu, May 14, 2015 at 1:01 PM, Morse, Richard E.,MGH <
REMORSE@mgh.harvard.edu> wrote:
> Ah. OK, thanks for letting me know. Do you know how long it will take for
> the release?
>
> Thanks,
> Ricky
>
> > On May 14, 2015, at 12:47 PM, Bruce Tietjen <
> bruce.tietjen@perfectsearchcorp.com> wrote:
> >
> > Hi Ricky,
> >
> > The NIH license validation response changed just a couple of days ago
> and this caused the cTakes license verification code to not recognize the
> validation.
> >
> > The source code has already been updated with the fix and an updated
> version if cTakes is in the process of being officially released.
> >
> >
> > Bruce Tietjen
> >
> >
> > On Thu, May 14, 2015 at 10:00 AM, Morse, Richard E.,MGH <
> REMORSE@mgh.harvard.edu> wrote:
> > Hi! I’m looking at cTAKES to help us with an abstraction problem. I
> downloaded the 3.2.1 install, and followed the instructions in the 3.2 User
> Install Guide to the best of my ability, and I’ve run into a problem.
> >
> > I have applied for a UMLS username and password, and having received
> them, I added them to the `runctakesCVD.sh` file. (I’m running Mac OS X
> 10.10, Java 8.) When I try to process the sample provided in the user
> guide, I get the error:
> >
> > 14 May 2015 11:41:16 ERROR UmlsUserApprover - UMLS Account at
> https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser is not valid for user
> ***** with *****
> >
> > (credentials obscured)
> >
> > I have verified the user name and password in several ways (using copy
> and paste, logging into the website, and then running the query directly
> against https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser with the
> (copied and pasted from the `runctakesCVD.sh` file)). According to all the
> ways I can verify, the account is active.
> >
> > Has anyone run into this? Is there something that I’m missing?
> >
> > Thanks,
> > Ricky
> >
> >
> > The information in this e-mail is intended only for the person to whom
> it is
> > addressed. If you believe this e-mail was sent to you in error and the
> e-mail
> > contains patient information, please contact the Partners Compliance
> HelpLine at
> > http://www.partners.org/complianceline . If the e-mail was sent to you
> in error
> > but does not contain patient information, please contact the sender and
> properly
> > dispose of the e-mail.
> >
>
>
Re: Error with UMLS authorization?
Posted by "Morse, Richard E.,MGH" <RE...@mgh.harvard.edu>.
Ah. OK, thanks for letting me know. Do you know how long it will take for the release?
Thanks,
Ricky
> On May 14, 2015, at 12:47 PM, Bruce Tietjen <br...@perfectsearchcorp.com> wrote:
>
> Hi Ricky,
>
> The NIH license validation response changed just a couple of days ago and this caused the cTakes license verification code to not recognize the validation.
>
> The source code has already been updated with the fix and an updated version if cTakes is in the process of being officially released.
>
>
> Bruce Tietjen
>
>
> On Thu, May 14, 2015 at 10:00 AM, Morse, Richard E.,MGH <RE...@mgh.harvard.edu> wrote:
> Hi! I’m looking at cTAKES to help us with an abstraction problem. I downloaded the 3.2.1 install, and followed the instructions in the 3.2 User Install Guide to the best of my ability, and I’ve run into a problem.
>
> I have applied for a UMLS username and password, and having received them, I added them to the `runctakesCVD.sh` file. (I’m running Mac OS X 10.10, Java 8.) When I try to process the sample provided in the user guide, I get the error:
>
> 14 May 2015 11:41:16 ERROR UmlsUserApprover - UMLS Account at https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser is not valid for user ***** with *****
>
> (credentials obscured)
>
> I have verified the user name and password in several ways (using copy and paste, logging into the website, and then running the query directly against https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser with the (copied and pasted from the `runctakesCVD.sh` file)). According to all the ways I can verify, the account is active.
>
> Has anyone run into this? Is there something that I’m missing?
>
> Thanks,
> Ricky
>
>
> The information in this e-mail is intended only for the person to whom it is
> addressed. If you believe this e-mail was sent to you in error and the e-mail
> contains patient information, please contact the Partners Compliance HelpLine at
> http://www.partners.org/complianceline . If the e-mail was sent to you in error
> but does not contain patient information, please contact the sender and properly
> dispose of the e-mail.
>
Re: Error with UMLS authorization?
Posted by Bruce Tietjen <br...@perfectsearchcorp.com>.
Hi Ricky,
The NIH license validation response changed just a couple of days ago and
this caused the cTakes license verification code to not recognize the
validation.
The source code has already been updated with the fix and an updated
version if cTakes is in the process of being officially released.
Bruce Tietjen
On Thu, May 14, 2015 at 10:00 AM, Morse, Richard E.,MGH <
REMORSE@mgh.harvard.edu> wrote:
> Hi! I’m looking at cTAKES to help us with an abstraction problem. I
> downloaded the 3.2.1 install, and followed the instructions in the 3.2 User
> Install Guide to the best of my ability, and I’ve run into a problem.
>
> I have applied for a UMLS username and password, and having received them,
> I added them to the `runctakesCVD.sh` file. (I’m running Mac OS X 10.10,
> Java 8.) When I try to process the sample provided in the user guide, I get
> the error:
>
> 14 May 2015 11:41:16 ERROR UmlsUserApprover - UMLS Account at
> https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser is not valid for user
> ***** with *****
>
> (credentials obscured)
>
> I have verified the user name and password in several ways (using copy and
> paste, logging into the website, and then running the query directly
> against https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser with the
> (copied and pasted from the `runctakesCVD.sh` file)). According to all the
> ways I can verify, the account is active.
>
> Has anyone run into this? Is there something that I’m missing?
>
> Thanks,
> Ricky
>
>
> The information in this e-mail is intended only for the person to whom it
> is
> addressed. If you believe this e-mail was sent to you in error and the
> e-mail
> contains patient information, please contact the Partners Compliance
> HelpLine at
> http://www.partners.org/complianceline . If the e-mail was sent to you in
> error
> but does not contain patient information, please contact the sender and
> properly
> dispose of the e-mail.
>
Re: Error with UMLS authorization?
Posted by Murali <mm...@gmail.com>.
Ricky
There is a build available that people are testing. Check it out.
Murali
Wired Informatics
> On May 14, 2015, at 12:00 PM, Morse, Richard E.,MGH <RE...@mgh.harvard.edu> wrote:
>
> Hi! I’m looking at cTAKES to help us with an abstraction problem. I downloaded the 3.2.1 install, and followed the instructions in the 3.2 User Install Guide to the best of my ability, and I’ve run into a problem.
>
> I have applied for a UMLS username and password, and having received them, I added them to the `runctakesCVD.sh` file. (I’m running Mac OS X 10.10, Java 8.) When I try to process the sample provided in the user guide, I get the error:
>
> 14 May 2015 11:41:16 ERROR UmlsUserApprover - UMLS Account at https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser is not valid for user ***** with *****
>
> (credentials obscured)
>
> I have verified the user name and password in several ways (using copy and paste, logging into the website, and then running the query directly against https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser with the (copied and pasted from the `runctakesCVD.sh` file)). According to all the ways I can verify, the account is active.
>
> Has anyone run into this? Is there something that I’m missing?
>
> Thanks,
> Ricky
>
>
> The information in this e-mail is intended only for the person to whom it is
> addressed. If you believe this e-mail was sent to you in error and the e-mail
> contains patient information, please contact the Partners Compliance HelpLine at
> http://www.partners.org/complianceline . If the e-mail was sent to you in error
> but does not contain patient information, please contact the sender and properly
> dispose of the e-mail.