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Posted to commits@cassandra.apache.org by "Michael Amygdalidis (JIRA)" <ji...@apache.org> on 2011/06/07 19:24:58 UTC
[jira] [Commented] (CASSANDRA-2707) Cassandra throws an exception
when querying a very large dataset.
[ https://issues.apache.org/jira/browse/CASSANDRA-2707?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13045549#comment-13045549 ]
Michael Amygdalidis commented on CASSANDRA-2707:
------------------------------------------------
The OOM problem exists even with a large (6 gigabyte) heap size.
Unfortunately, due to outside influences I was forced to destroy and recreate the production DB. This has caused the problem to disappear. I cannot currently reproduce. There was an upgrade from 0.7.0 to 0.8.* involved, which makes me suspect it may be related to a known issue.
Apologies I could not provide further information. At this point, I cannot reproduce the issue myself, so feel free to close.
> Cassandra throws an exception when querying a very large dataset.
> -----------------------------------------------------------------
>
> Key: CASSANDRA-2707
> URL: https://issues.apache.org/jira/browse/CASSANDRA-2707
> Project: Cassandra
> Issue Type: Bug
> Affects Versions: 0.8 beta 1
> Environment: Eight cassandra instances, with a replication factor of three.
> DB is running on EC2, all machines are in the same availability zone.
> All machines are m1.xlarge, under 70% disk usage for the cassandra data drive, and with 16G of RAM.
> java version "1.6.0_04"
> Java(TM) SE Runtime Environment (build 1.6.0_04-b12)
> Java HotSpot(TM) 64-Bit Server VM (build 10.0-b19, mixed mode)
> Reporter: Michael Amygdalidis
>
> Cassandra reliably throws a runtime exception (without terminating) when querying a very large dataset.
> The cluster performs just fine in normal situations with data sets of 10,000 or so. However, when querying a column family through either fauna/cassandra or through CLI for all of the values matching a certain key, with a limit of 100, the following exception is thrown.
> ERROR [ReadStage:126] 2011-05-25 14:14:46,260 AbstractCassandraDaemon.java (line 113) Fatal exception in thread Thread[ReadStage:126,5,main]
> java.lang.RuntimeException: java.io.IOException: Corrupt (negative) value length encountered
> at org.apache.cassandra.db.columniterator.IndexedSliceReader.computeNext(IndexedSliceReader.java:126)
> at org.apache.cassandra.db.columniterator.IndexedSliceReader.computeNext(IndexedSliceReader.java:49)
> at com.google.common.collect.AbstractIterator.tryToComputeNext(AbstractIterator.java:140)
> at com.google.common.collect.AbstractIterator.hasNext(AbstractIterator.java:135)
> at org.apache.cassandra.db.columniterator.SSTableSliceIterator.hasNext(SSTableSliceIterator.java:108)
> at org.apache.commons.collections.iterators.CollatingIterator.set(CollatingIterator.java:283)
> at org.apache.commons.collections.iterators.CollatingIterator.least(CollatingIterator.java:326)
> at org.apache.commons.collections.iterators.CollatingIterator.next(CollatingIterator.java:230)
> at org.apache.cassandra.utils.ReducingIterator.computeNext(ReducingIterator.java:69)
> at com.google.common.collect.AbstractIterator.tryToComputeNext(AbstractIterator.java:140)
> at com.google.common.collect.AbstractIterator.hasNext(AbstractIterator.java:135)
> at org.apache.cassandra.db.filter.SliceQueryFilter.collectReducedColumns(SliceQueryFilter.java:116)
> at org.apache.cassandra.db.filter.QueryFilter.collectCollatedColumns(QueryFilter.java:130)
> at org.apache.cassandra.db.ColumnFamilyStore.getTopLevelColumns(ColumnFamilyStore.java:1302)
> at org.apache.cassandra.db.ColumnFamilyStore.getColumnFamily(ColumnFamilyStore.java:1187)
> at org.apache.cassandra.db.ColumnFamilyStore.getColumnFamily(ColumnFamilyStore.java:1144)
> at org.apache.cassandra.db.Table.getRow(Table.java:385)
> at org.apache.cassandra.db.SliceFromReadCommand.getRow(SliceFromReadCommand.java:61)
> at org.apache.cassandra.db.ReadVerbHandler.doVerb(ReadVerbHandler.java:69)
> at org.apache.cassandra.net.MessageDeliveryTask.run(MessageDeliveryTask.java:72)
> at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:885)
> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:907)
> at java.lang.Thread.run(Thread.java:619)
> Caused by: java.io.IOException: Corrupt (negative) value length encountered
> at org.apache.cassandra.utils.ByteBufferUtil.readWithLength(ByteBufferUtil.java:348)
> at org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:126)
> at org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:82)
> at org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:72)
> at org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:36)
> at org.apache.cassandra.db.columniterator.IndexedSliceReader$IndexedBlockFetcher.getNextBlock(IndexedSliceReader.java:179)
> at org.apache.cassandra.db.columniterator.IndexedSliceReader.computeNext(IndexedSliceReader.java:121)
> ... 22 more
> Additional Info:
> * I can confirm that the same exception is reliably thrown on three instances at about the same as the query is executed.
> * The timeout for a remote procedure call is between nodes is 10 seconds, which is about the time it takes for the query to respond with null.
> * Asking for forward or reverse search does not affect results, however, in production we'd need to do a reverse search.
> Steps to Reproduce:
> Have a column family with at least 100 million values, including at least 30 million with the same key. Try to get 100 items of a given key from that column family.
> Expected behaviour: To get back the 100 items we queried for, which is what happens when the number of items under a given key is not so large. The unexpected behaviour only manifests itself when the number of possible items is extremely large.
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