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Posted to dev@airavata.apache.org by Lahiru Gunathilake <gl...@gmail.com> on 2013/06/17 21:05:09 UTC
[TESTING] Apache Airavata 0.8 RC2
Hi Devs,
Please find the RC2 packs here[1]. If you find any blockers please raise a
jira and respond to this email.
[1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
Regards
--
System Analyst Programmer
PTI Lab
Indiana University
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Suresh Marru <sm...@apache.org>.
Hi All,
Please do not send patches to the trunk yet, lets get the 0.8 release out.
The current hangup is running through open JIRA's for 0.8 and either closing the ones which are fixed and deferring others to 0.9. I will appreciate any help -
Here is JIRA query to quickly look at open 0.8 issues " project = AIRAVATA AND fixVersion = "0.8" AND status = Open ORDER BY priority DESC"
Suresh
On Jun 25, 2013, at 3:08 PM, Lahiru Gunathilake <gl...@gmail.com> wrote:
> Sure suresh, I might be able to work on it too, but if you have time please
> go ahead .
>
> Lahiru
>
> On Tuesday, June 25, 2013, Suresh Marru wrote:
>
>> Hi Lahiru,
>>
>> Can I cut this release? I have time tomorrow morning to do this release if
>> you want me to.
>>
>> Suresh
>>
>> On Jun 21, 2013, at 3:20 PM, Suresh Marru <sm...@apache.org> wrote:
>>
>>> Hi Lahiru,
>>>
>>> Good to see some testing on first two RC's. For next RC can we now
>> transition to VOTING so we can open the trunk for development? How about we
>> leave this RC open for testing through the weekend and call the voting on
>> Monday?
>>>
>>> Suresh
>>>
>>> On Jun 21, 2013, at 1:52 PM, Lahiru Gunathilake <gl...@gmail.com>
>> wrote:
>>>
>>>> Hi All,
>>>>
>>>> I found a blocker[1] and almost fixed.
>>>>
>>>> Will post another RC soon.
>>>>
>>>> [1]https://issues.apache.org/jira/browse/AIRAVATA-872
>>>> Regards
>>>> Lahiru
>>>>
>>>>
>>>> On Fri, Jun 21, 2013 at 1:48 PM, Amila Jayasekara
>>>> <th...@gmail.com>wrote:
>>>>
>>>>> JNLP Binaries are also verified with tomcat server war with default
>>>>> database.
>>>>>
>>>>> Verified 5 min and 10 min tutorials.
>>>>>
>>>>> Thanks
>>>>> Amila
>>>>>
>>>>>
>>>>> On Tue, Jun 18, 2013 at 2:54 PM, Danushka Menikkumbura <
>>>>> danushka.menikkumbura@gmail.com> wrote:
>>>>>
>>>>>> Hi,
>>>>>>
>>>>>> I have verified the server and xbaya binary distributions on Windows 7
>>>>>> using the 5 min/10 min samples.
>>>>>>
>>>>>> Thanks,
>>>>>> Danushka
>>>>>>
>>>>>>
>>>>>> On Tue, Jun 18, 2013 at 11:54 PM, Viknes Balasubramanee <
>> viknesb@msn.com
>>>>>>> wrote:
>>>>>>
>>>>>>> Hi,
>>>>>>>
>>>>>>> I got the below error when building from the source in a Windows PC.
>>>>> The
>>>>>>> integration-test failed.
>>>>>>>
>>>>>>> [INFO] [talledLocalContainer]
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>> DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby://localhos
>>>>>>> t:1527/persist
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>> ent_data;create=true;user=airavata;password=airavata,Username=airavata,Passw
>>>>>>> ord=airavata,validationQuery=SELECT 1 from C
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>> onfiguration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=tr
>>>>>>> ue,testOnBorrow=true
>>>>>>> [INFO] [talledLocalContainer] 48 airavata_data INFO [Thread-6]
>>>>>>> openjpa.Runtime - Starting OpenJPA 2.2.0
>>>>>>> [INFO] [talledLocalContainer] [ERROR] Error while initializing the
>>>>>> Airavata
>>>>>>> API
>>>>>>> [INFO] [talledLocalContainer]
>>>>>>>
>>>>>
>> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
>>>>>>> Error while initi
>>>>>>> alizing the Airavata API
>>>>>>> [INFO] [talledLocalContainer] at
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>>>> :64)
>>>>>>> [INFO] [talledLocalContainer] at
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>>>> :43)
>>>>>>> [INFO] [talledLocalContainer] at
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>>>> :39)
>>>>>>> [INFO] [talledLocalContainer] at
>>>>>>>
>>>>>>>
>>>>>>
>>>>> org.apache.airavata.wsmg.msgbox.MsgBoxServiceLi
>
>
>
> --
> System Analyst Programmer
> PTI Lab
> Indiana University
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Lahiru Gunathilake <gl...@gmail.com>.
Sure suresh, I might be able to work on it too, but if you have time please
go ahead .
Lahiru
On Tuesday, June 25, 2013, Suresh Marru wrote:
> Hi Lahiru,
>
> Can I cut this release? I have time tomorrow morning to do this release if
> you want me to.
>
> Suresh
>
> On Jun 21, 2013, at 3:20 PM, Suresh Marru <sm...@apache.org> wrote:
>
> > Hi Lahiru,
> >
> > Good to see some testing on first two RC's. For next RC can we now
> transition to VOTING so we can open the trunk for development? How about we
> leave this RC open for testing through the weekend and call the voting on
> Monday?
> >
> > Suresh
> >
> > On Jun 21, 2013, at 1:52 PM, Lahiru Gunathilake <gl...@gmail.com>
> wrote:
> >
> >> Hi All,
> >>
> >> I found a blocker[1] and almost fixed.
> >>
> >> Will post another RC soon.
> >>
> >> [1]https://issues.apache.org/jira/browse/AIRAVATA-872
> >> Regards
> >> Lahiru
> >>
> >>
> >> On Fri, Jun 21, 2013 at 1:48 PM, Amila Jayasekara
> >> <th...@gmail.com>wrote:
> >>
> >>> JNLP Binaries are also verified with tomcat server war with default
> >>> database.
> >>>
> >>> Verified 5 min and 10 min tutorials.
> >>>
> >>> Thanks
> >>> Amila
> >>>
> >>>
> >>> On Tue, Jun 18, 2013 at 2:54 PM, Danushka Menikkumbura <
> >>> danushka.menikkumbura@gmail.com> wrote:
> >>>
> >>>> Hi,
> >>>>
> >>>> I have verified the server and xbaya binary distributions on Windows 7
> >>>> using the 5 min/10 min samples.
> >>>>
> >>>> Thanks,
> >>>> Danushka
> >>>>
> >>>>
> >>>> On Tue, Jun 18, 2013 at 11:54 PM, Viknes Balasubramanee <
> viknesb@msn.com
> >>>>> wrote:
> >>>>
> >>>>> Hi,
> >>>>>
> >>>>> I got the below error when building from the source in a Windows PC.
> >>> The
> >>>>> integration-test failed.
> >>>>>
> >>>>> [INFO] [talledLocalContainer]
> >>>>>
> >>>>>
> >>>>
> >>>
> DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby://localhos
> >>>>> t:1527/persist
> >>>>>
> >>>>>
> >>>>
> >>>
> ent_data;create=true;user=airavata;password=airavata,Username=airavata,Passw
> >>>>> ord=airavata,validationQuery=SELECT 1 from C
> >>>>>
> >>>>>
> >>>>
> >>>
> onfiguration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=tr
> >>>>> ue,testOnBorrow=true
> >>>>> [INFO] [talledLocalContainer] 48 airavata_data INFO [Thread-6]
> >>>>> openjpa.Runtime - Starting OpenJPA 2.2.0
> >>>>> [INFO] [talledLocalContainer] [ERROR] Error while initializing the
> >>>> Airavata
> >>>>> API
> >>>>> [INFO] [talledLocalContainer]
> >>>>>
> >>>
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> >>>>> Error while initi
> >>>>> alizing the Airavata API
> >>>>> [INFO] [talledLocalContainer] at
> >>>>>
> >>>>>
> >>>>
> >>>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> >>>>> :64)
> >>>>> [INFO] [talledLocalContainer] at
> >>>>>
> >>>>>
> >>>>
> >>>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> >>>>> :43)
> >>>>> [INFO] [talledLocalContainer] at
> >>>>>
> >>>>>
> >>>>
> >>>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> >>>>> :39)
> >>>>> [INFO] [talledLocalContainer] at
> >>>>>
> >>>>>
> >>>>
> >>> org.apache.airavata.wsmg.msgbox.MsgBoxServiceLi
--
System Analyst Programmer
PTI Lab
Indiana University
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Suresh Marru <sm...@apache.org>.
Hi Lahiru,
Can I cut this release? I have time tomorrow morning to do this release if you want me to.
Suresh
On Jun 21, 2013, at 3:20 PM, Suresh Marru <sm...@apache.org> wrote:
> Hi Lahiru,
>
> Good to see some testing on first two RC's. For next RC can we now transition to VOTING so we can open the trunk for development? How about we leave this RC open for testing through the weekend and call the voting on Monday?
>
> Suresh
>
> On Jun 21, 2013, at 1:52 PM, Lahiru Gunathilake <gl...@gmail.com> wrote:
>
>> Hi All,
>>
>> I found a blocker[1] and almost fixed.
>>
>> Will post another RC soon.
>>
>> [1]https://issues.apache.org/jira/browse/AIRAVATA-872
>> Regards
>> Lahiru
>>
>>
>> On Fri, Jun 21, 2013 at 1:48 PM, Amila Jayasekara
>> <th...@gmail.com>wrote:
>>
>>> JNLP Binaries are also verified with tomcat server war with default
>>> database.
>>>
>>> Verified 5 min and 10 min tutorials.
>>>
>>> Thanks
>>> Amila
>>>
>>>
>>> On Tue, Jun 18, 2013 at 2:54 PM, Danushka Menikkumbura <
>>> danushka.menikkumbura@gmail.com> wrote:
>>>
>>>> Hi,
>>>>
>>>> I have verified the server and xbaya binary distributions on Windows 7
>>>> using the 5 min/10 min samples.
>>>>
>>>> Thanks,
>>>> Danushka
>>>>
>>>>
>>>> On Tue, Jun 18, 2013 at 11:54 PM, Viknes Balasubramanee <viknesb@msn.com
>>>>> wrote:
>>>>
>>>>> Hi,
>>>>>
>>>>> I got the below error when building from the source in a Windows PC.
>>> The
>>>>> integration-test failed.
>>>>>
>>>>> [INFO] [talledLocalContainer]
>>>>>
>>>>>
>>>>
>>> DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby://localhos
>>>>> t:1527/persist
>>>>>
>>>>>
>>>>
>>> ent_data;create=true;user=airavata;password=airavata,Username=airavata,Passw
>>>>> ord=airavata,validationQuery=SELECT 1 from C
>>>>>
>>>>>
>>>>
>>> onfiguration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=tr
>>>>> ue,testOnBorrow=true
>>>>> [INFO] [talledLocalContainer] 48 airavata_data INFO [Thread-6]
>>>>> openjpa.Runtime - Starting OpenJPA 2.2.0
>>>>> [INFO] [talledLocalContainer] [ERROR] Error while initializing the
>>>> Airavata
>>>>> API
>>>>> [INFO] [talledLocalContainer]
>>>>>
>>> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
>>>>> Error while initi
>>>>> alizing the Airavata API
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>> :64)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>> :43)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>> :39)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.wsmg.msgbox.MsgBoxServiceLifeCycle$1.run(MsgBoxServiceLi
>>>>> feCycle.j
>>>>> ava:117)
>>>>> [INFO] [talledLocalContainer] Caused by:
>>>>>
>>> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
>>>>> Error
>>>>> while initializing the Airavata API
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
>>>>> )
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>> :61)
>>>>> [INFO] [talledLocalContainer] ... 3 more
>>>>> [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
>>>>> fatal general error> org.apache.openjpa.persiste
>>>>> nce.PersistenceException: Cannot create PoolableConnectionFactory
>>> (Schema
>>>>> 'AIRAVATA' does not exist)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
>>>>> Factory.j
>>>>> ava:102)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
>>>>> DBCConfig
>>>>> urationImpl.java:603)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
>>>>> itory.jav
>>>>> a:1510)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
>>>>> java:518)
>>>>>
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
>>>>> java:443)
>>>>>
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
>>>>> ryValue.j
>>>>> ava:68)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
>>>>> ce(OpenJP
>>>>> AConfigurationImpl.java:968)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
>>>>> ce(OpenJP
>>>>> AConfigurationImpl.java:959)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.kernel.AbstractBrokerFactory.makeReadOnly(AbstractBrokerF
>>>>> actory.ja
>>>>> va:638)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
>>>>> ory.java:
>>>>> 203)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
>>>>> Factory.j
>>>>> ava:156)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>>> EntityMan
>>>>> agerFactoryImpl.java:227)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>>> EntityMan
>>>>> agerFactoryImpl.java:154)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>>> EntityMan
>>>>> agerFactoryImpl.java:60)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
>>>>> ResourceU
>>>>> tils.java:68)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
>>>>> (Resource
>>>>> Utils.java:201)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
>>>>> ResourceU
>>>>> tils.java:223)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
>>>>> figuratio
>>>>> n(AiravataJPARegistry.java:226)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
>>>>> lize(Aira
>>>>> vataJPARegistry.java:159)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
>>>>> aRegistry
>>>>> Factory.java:81)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
>>>>> 6)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
>>>>> 12)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
>>>>> )
>>>>> [INFO] [talledLocalContainer] ... 4 more
>>>>> [INFO] [talledLocalContainer] Caused by:
>>>>> org.apache.commons.dbcp.SQLNestedException: Cannot create
>>>>> PoolableConnectionFac
>>>>> tory (Schema 'AIRAVATA' does not exist)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
>>>>> cDataSour
>>>>> ce.java:1549)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
>>>>> a:1388)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
>>>>> 044)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
>>>>> aSource.j
>>>>> ava:110)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
>>>>> aSource.j
>>>>> ava:87)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
>>>>> Factory.j
>>>>> ava:91)
>>>>> [INFO] [talledLocalContainer] ... 28 more
>>>>> [INFO] [talledLocalContainer] Caused by:
>>>> java.sql.SQLSyntaxErrorException:
>>>>> Schema 'AIRAVATA' does not exist
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
>>>>> .java:208
>>>>> )
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
>>>>> eConnecti
>>>>> onFactory.java:658)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
>>>>> ource.jav
>>>>> a:1558)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
>>>>> cDataSour
>>>>> ce.java:1545)
>>>>> [INFO] [talledLocalContainer] ... 33 more
>>>>> [INFO] [talledLocalContainer] Caused by:
>>>>> org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not
>>> exist
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
>>>>> own Sourc
>>>>> e)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>
>>> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
>>>>> [INFO] [talledLocalContainer] ... 38 more
>>>>> [INFO] [talledLocalContainer] [ERROR] Error while initializing the
>>>> Airavata
>>>>> API
>>>>> [INFO] [talledLocalContainer]
>>>>>
>>> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
>>>>> Error while initi
>>>>> alizing the Airavata API
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>> :64)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>> :43)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>> :39)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.wsmg.broker.BrokerServiceLifeCycle$1.run(BrokerServiceLi
>>>>> feCycle.j
>>>>> ava:156)
>>>>> [INFO] [talledLocalContainer] Caused by:
>>>>>
>>> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
>>>>> Error
>>>>> while initializing the Airavata API
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
>>>>> )
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>>> :61)
>>>>> [INFO] [talledLocalContainer] ... 3 more
>>>>> [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
>>>>> fatal general error> org.apache.openjpa.persiste
>>>>> nce.PersistenceException: Cannot create PoolableConnectionFactory
>>> (Schema
>>>>> 'AIRAVATA' does not exist)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
>>>>> Factory.j
>>>>> ava:102)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
>>>>> DBCConfig
>>>>> urationImpl.java:603)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
>>>>> itory.jav
>>>>> a:1510)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
>>>>> java:518)
>>>>>
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
>>>>> java:443)
>>>>>
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
>>>>> ryValue.j
>>>>> ava:68)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
>>>>> ce(OpenJP
>>>>> AConfigurationImpl.java:968)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
>>>>> ce(OpenJP
>>>>> AConfigurationImpl.java:959)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getMappingRepositoryInsta
>>>>> nce(JDBCC
>>>>> onfigurationImpl.java:711)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
>>>>> kerFactor
>>>>> y.java:140)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
>>>>> kerFactor
>>>>> y.java:164)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.newBrokerImpl(JDBCBrokerFac
>>>>> tory.java
>>>>> :122)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
>>>>> ory.java:
>>>>> 209)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
>>>>> Factory.j
>>>>> ava:156)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>>> EntityMan
>>>>> agerFactoryImpl.java:227)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>>> EntityMan
>>>>> agerFactoryImpl.java:154)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>>> EntityMan
>>>>> agerFactoryImpl.java:60)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
>>>>> ResourceU
>>>>> tils.java:68)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
>>>>> (Resource
>>>>> Utils.java:201)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
>>>>> ResourceU
>>>>> tils.java:223)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
>>>>> figuratio
>>>>> n(AiravataJPARegistry.java:226)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
>>>>> lize(Aira
>>>>> vataJPARegistry.java:159)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
>>>>> aRegistry
>>>>> Factory.java:81)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
>>>>> 6)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
>>>>> 12)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
>>>>> )
>>>>> [INFO] [talledLocalContainer] ... 4 more
>>>>> [INFO] [talledLocalContainer] Caused by:
>>>>> org.apache.commons.dbcp.SQLNestedException: Cannot create
>>>>> PoolableConnectionFac
>>>>> tory (Schema 'AIRAVATA' does not exist)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
>>>>> cDataSour
>>>>> ce.java:1549)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
>>>>> a:1388)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
>>>>> 044)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
>>>>> aSource.j
>>>>> ava:110)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
>>>>> aSource.j
>>>>> ava:87)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
>>>>> Factory.j
>>>>> ava:91)
>>>>> [INFO] [talledLocalContainer] ... 31 more
>>>>> [INFO] [talledLocalContainer] Caused by:
>>>> java.sql.SQLSyntaxErrorException:
>>>>> Schema 'AIRAVATA' does not exist
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
>>>>> .java:208
>>>>> )
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
>>>>> eConnecti
>>>>> onFactory.java:658)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
>>>>> ource.jav
>>>>> a:1558)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
>>>>> cDataSour
>>>>> ce.java:1545)
>>>>> [INFO] [talledLocalContainer] ... 36 more
>>>>> [INFO] [talledLocalContainer] Caused by:
>>>>> org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not
>>> exist
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
>>>>> own Sourc
>>>>> e)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>>
>>>>
>>> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>>
>>>>
>>> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
>>>>> [INFO] [talledLocalContainer] at
>>>>> org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
>>>>> [INFO] [talledLocalContainer] ... 41 more
>>>>>
>>>>>
>>>>> - Viknes
>>>>>
>>>>> -----Original Message-----
>>>>> From: Saminda Wijeratne [mailto:samindaw@gmail.com]
>>>>> Sent: Tuesday, June 18, 2013 12:43 PM
>>>>> To: dev@airavata.apache.org
>>>>> Subject: Re: [TESTING] Apache Airavata 0.8 RC2
>>>>>
>>>>> Tested the following using the standard airavata server distribution
>>> and
>>>> a
>>>>> deployment of airavata webapps in a tomcat 7.0.26 distribution,
>>>>> 5 & 10 minute tutorial
>>>>> API client samples works
>>>>> Airavata Client libraries verified for using API
>>>>> Successfully built source pack with integration tests but
>>>> *without*unit
>>>>> tests.
>>>>>
>>>>> When the source packs were built with tests at airavata-jpa-registry
>>>> build
>>>>> it waits with the following...
>>>>> Tue Jun 18 12:28:15 EDT 2013 : Apache Derby Network Server - 10.9.1.0 -
>>>>> (1344872) started and ready to accept connections on port 20000
>>> Running a
>>>>> query to test the database tables existence.
>>>>> Tue Jun 18 12:29:15 EDT 2013 : Could not listen on port 20000 on host
>>>>> 127.0.0.1:
>>>>> java.net.BindException: Address already in use Running a query to test
>>>> the
>>>>> database tables existence.
>>>>> Tue Jun 18 12:30:16 EDT 2013 : Could not listen on port 20000 on host
>>>>> 127.0.0.1:
>>>>> java.net.BindException: Address already in use Running a query to test
>>>> the
>>>>> database tables existence.
>>>>> Tue Jun 18 12:31:16 EDT 2013 : Could not listen on port 20000 on host
>>>>> 127.0.0.1:
>>>>> java.net.BindException: Address already in use Running a query to test
>>>> the
>>>>> database tables existence.
>>>>>
>>>>> It is also worth mentioning that when deployed in tomcat I was not able
>>>> to
>>>>> run the 10 min tutorial without having considerable amount of free
>>> memory
>>>>> in
>>>>> the machine.
>>>>> [ERROR] Error while executing provider
>>>>> org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
>>>>> org.apache.airavata.gfac.GFacException: Error while executing provider
>>>>> org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
>>>>> at
>>> org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:94)
>>>>> at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:71)
>>>>> at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53)
>>>>> at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInv
>>>>> oker.java:349)
>>>>> at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(
>>>>> WorkflowInterpreter.java:710)
>>>>> at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically
>>>>> (WorkflowInterpreter.java:530)
>>>>> at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(Workflo
>>>>> wInterpreter.java:89)
>>>>> at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInte
>>>>> rpreter.java:197)
>>>>> Caused by: org.apache.airavata.gfac.provider.GFacProviderException:
>>>> Cannot
>>>>> run program "/bin/echo" (in directory
>>>>>
>>>>>
>>>>
>>> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
>>>>> c427"):
>>>>> java.io.IOException: error=12, Cannot allocate memory
>>>>> at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
>>>>> ava:121)
>>>>> at
>>> org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:92)
>>>>> ... 7 more
>>>>> Caused by: java.io.IOException: Cannot run program "/bin/echo" (in
>>>>> directory
>>>>>
>>>>>
>>>>
>>> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
>>>>> c427"):
>>>>> java.io.IOException: error=12, Cannot allocate memory
>>>>> at java.lang.ProcessBuilder.start(ProcessBuilder.java:460)
>>>>> at
>>>>>
>>>>>
>>>>
>>> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
>>>>> ava:84)
>>>>> ... 8 more
>>>>> Caused by: java.io.IOException: java.io.IOException: error=12, Cannot
>>>>> allocate memory
>>>>> at java.lang.UNIXProcess.<init>(UNIXProcess.java:148)
>>>>> at java.lang.ProcessImpl.start(ProcessImpl.java:65)
>>>>> at java.lang.ProcessBuilder.start(ProcessBuilder.java:453)
>>>>> ... 9 more
>>>>>
>>>>> Saminda
>>>>>
>>>>>
>>>>> On Tue, Jun 18, 2013 at 11:47 AM, Lahiru Gunathilake
>>>>> <gl...@gmail.com>wrote:
>>>>>
>>>>>> Done !
>>>>>>
>>>>>>
>>>>>> On Tue, Jun 18, 2013 at 11:30 AM, Saminda Wijeratne
>>>>>> <samindaw@gmail.com
>>>>>>> wrote:
>>>>>>
>>>>>>> Hi Lahiru,
>>>>>>>
>>>>>>> Can you include the source packs as well please.
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> On Tue, Jun 18, 2013 at 11:23 AM, Chathuri Wimalasena
>>>>>>> <ka...@gmail.com>wrote:
>>>>>>>
>>>>>>>> I tested the following scenarios.
>>>>>>>>
>>>>>>>> - 5 mins and 10 mins samples with default derby database and
>>>>>>>> then
>>>>>> with
>>>>>>>> mysql database
>>>>>>>> - Basic functionalities of XBaya (creating applications,
>>>>>>>> creating
>>>>>>> hosts,
>>>>>>>> deleting, registry browser view, importing and exporting from
>>>>>>> registry)
>>>>>>>> - Ran two client samples with mysql (create application and
>>>>>>>> workflow
>>>>>>> run
>>>>>>>> samples)
>>>>>>>>
>>>>>>>> I did not encounter any issues while doing any of the tests. I
>>>>>>>> would
>>>>>> like
>>>>>>>> to suggest a small improvement to workflow run sample. In that
>>>>>>>> echo
>>>>>>> sample
>>>>>>>> we give the input as "ODI Test" but the output we receive is just
>>>>>> "ODI".
>>>>>>> I
>>>>>>>> think we can use a better input value (which does not have a
>>> space
>>>>>>>> in between).
>>>>>>>>
>>>>>>>> Regards,
>>>>>>>> Chathuri
>>>>>>>>
>>>>>>>>
>>>>>>>> On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake
>>>>>>>> <glahiru@gmail.com
>>>>>>>>> wrote:
>>>>>>>>
>>>>>>>>> Hi Devs,
>>>>>>>>>
>>>>>>>>> Please find the RC2 packs here[1]. If you find any blockers
>>>>>>>>> please
>>>>>>> raise
>>>>>>>> a
>>>>>>>>> jira and respond to this email.
>>>>>>>>>
>>>>>>>>> [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
>>>>>>>>> Regards
>>>>>>>>>
>>>>>>>>> --
>>>>>>>>> System Analyst Programmer
>>>>>>>>> PTI Lab
>>>>>>>>> Indiana University
>>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>> System Analyst Programmer
>>>>>> PTI Lab
>>>>>> Indiana University
>>>>>>
>>>>>
>>>>
>>>
>>
>>
>>
>> --
>> System Analyst Programmer
>> PTI Lab
>> Indiana University
>
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Suresh Marru <sm...@apache.org>.
Hi Lahiru,
Good to see some testing on first two RC's. For next RC can we now transition to VOTING so we can open the trunk for development? How about we leave this RC open for testing through the weekend and call the voting on Monday?
Suresh
On Jun 21, 2013, at 1:52 PM, Lahiru Gunathilake <gl...@gmail.com> wrote:
> Hi All,
>
> I found a blocker[1] and almost fixed.
>
> Will post another RC soon.
>
> [1]https://issues.apache.org/jira/browse/AIRAVATA-872
> Regards
> Lahiru
>
>
> On Fri, Jun 21, 2013 at 1:48 PM, Amila Jayasekara
> <th...@gmail.com>wrote:
>
>> JNLP Binaries are also verified with tomcat server war with default
>> database.
>>
>> Verified 5 min and 10 min tutorials.
>>
>> Thanks
>> Amila
>>
>>
>> On Tue, Jun 18, 2013 at 2:54 PM, Danushka Menikkumbura <
>> danushka.menikkumbura@gmail.com> wrote:
>>
>>> Hi,
>>>
>>> I have verified the server and xbaya binary distributions on Windows 7
>>> using the 5 min/10 min samples.
>>>
>>> Thanks,
>>> Danushka
>>>
>>>
>>> On Tue, Jun 18, 2013 at 11:54 PM, Viknes Balasubramanee <viknesb@msn.com
>>>> wrote:
>>>
>>>> Hi,
>>>>
>>>> I got the below error when building from the source in a Windows PC.
>> The
>>>> integration-test failed.
>>>>
>>>> [INFO] [talledLocalContainer]
>>>>
>>>>
>>>
>> DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby://localhos
>>>> t:1527/persist
>>>>
>>>>
>>>
>> ent_data;create=true;user=airavata;password=airavata,Username=airavata,Passw
>>>> ord=airavata,validationQuery=SELECT 1 from C
>>>>
>>>>
>>>
>> onfiguration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=tr
>>>> ue,testOnBorrow=true
>>>> [INFO] [talledLocalContainer] 48 airavata_data INFO [Thread-6]
>>>> openjpa.Runtime - Starting OpenJPA 2.2.0
>>>> [INFO] [talledLocalContainer] [ERROR] Error while initializing the
>>> Airavata
>>>> API
>>>> [INFO] [talledLocalContainer]
>>>>
>> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
>>>> Error while initi
>>>> alizing the Airavata API
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>> :64)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>> :43)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>> :39)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.wsmg.msgbox.MsgBoxServiceLifeCycle$1.run(MsgBoxServiceLi
>>>> feCycle.j
>>>> ava:117)
>>>> [INFO] [talledLocalContainer] Caused by:
>>>>
>> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
>>>> Error
>>>> while initializing the Airavata API
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
>>>> )
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>> :61)
>>>> [INFO] [talledLocalContainer] ... 3 more
>>>> [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
>>>> fatal general error> org.apache.openjpa.persiste
>>>> nce.PersistenceException: Cannot create PoolableConnectionFactory
>> (Schema
>>>> 'AIRAVATA' does not exist)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
>>>> Factory.j
>>>> ava:102)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
>>>> DBCConfig
>>>> urationImpl.java:603)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
>>>> itory.jav
>>>> a:1510)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
>>>> java:518)
>>>>
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
>>>> java:443)
>>>>
>>>> [INFO] [talledLocalContainer] at
>>>>
>> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
>>>> ryValue.j
>>>> ava:68)
>>>> [INFO] [talledLocalContainer] at
>>>>
>> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
>>>> ce(OpenJP
>>>> AConfigurationImpl.java:968)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
>>>> ce(OpenJP
>>>> AConfigurationImpl.java:959)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.kernel.AbstractBrokerFactory.makeReadOnly(AbstractBrokerF
>>>> actory.ja
>>>> va:638)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
>>>> ory.java:
>>>> 203)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
>>>> Factory.j
>>>> ava:156)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>> EntityMan
>>>> agerFactoryImpl.java:227)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>> EntityMan
>>>> agerFactoryImpl.java:154)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>> EntityMan
>>>> agerFactoryImpl.java:60)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
>>>> ResourceU
>>>> tils.java:68)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
>>>> (Resource
>>>> Utils.java:201)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
>>>> ResourceU
>>>> tils.java:223)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
>>>> figuratio
>>>> n(AiravataJPARegistry.java:226)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
>>>> lize(Aira
>>>> vataJPARegistry.java:159)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
>>>> aRegistry
>>>> Factory.java:81)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
>>>> 6)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
>>>> 12)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
>>>> )
>>>> [INFO] [talledLocalContainer] ... 4 more
>>>> [INFO] [talledLocalContainer] Caused by:
>>>> org.apache.commons.dbcp.SQLNestedException: Cannot create
>>>> PoolableConnectionFac
>>>> tory (Schema 'AIRAVATA' does not exist)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
>>>> cDataSour
>>>> ce.java:1549)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
>>>> a:1388)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
>>>> 044)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
>>>> aSource.j
>>>> ava:110)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
>>>> aSource.j
>>>> ava:87)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
>>>> Factory.j
>>>> ava:91)
>>>> [INFO] [talledLocalContainer] ... 28 more
>>>> [INFO] [talledLocalContainer] Caused by:
>>> java.sql.SQLSyntaxErrorException:
>>>> Schema 'AIRAVATA' does not exist
>>>> [INFO] [talledLocalContainer] at
>>>>
>> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
>>>> .java:208
>>>> )
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
>>>> eConnecti
>>>> onFactory.java:658)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
>>>> ource.jav
>>>> a:1558)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
>>>> cDataSour
>>>> ce.java:1545)
>>>> [INFO] [talledLocalContainer] ... 33 more
>>>> [INFO] [talledLocalContainer] Caused by:
>>>> org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not
>> exist
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>>
>> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
>>>> own Sourc
>>>> e)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>
>> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
>>>> [INFO] [talledLocalContainer] ... 38 more
>>>> [INFO] [talledLocalContainer] [ERROR] Error while initializing the
>>> Airavata
>>>> API
>>>> [INFO] [talledLocalContainer]
>>>>
>> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
>>>> Error while initi
>>>> alizing the Airavata API
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>> :64)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>> :43)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>> :39)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.wsmg.broker.BrokerServiceLifeCycle$1.run(BrokerServiceLi
>>>> feCycle.j
>>>> ava:156)
>>>> [INFO] [talledLocalContainer] Caused by:
>>>>
>> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
>>>> Error
>>>> while initializing the Airavata API
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
>>>> )
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
>>>> :61)
>>>> [INFO] [talledLocalContainer] ... 3 more
>>>> [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
>>>> fatal general error> org.apache.openjpa.persiste
>>>> nce.PersistenceException: Cannot create PoolableConnectionFactory
>> (Schema
>>>> 'AIRAVATA' does not exist)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
>>>> Factory.j
>>>> ava:102)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
>>>> DBCConfig
>>>> urationImpl.java:603)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
>>>> itory.jav
>>>> a:1510)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
>>>> java:518)
>>>>
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
>>>> java:443)
>>>>
>>>> [INFO] [talledLocalContainer] at
>>>>
>> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
>>>> ryValue.j
>>>> ava:68)
>>>> [INFO] [talledLocalContainer] at
>>>>
>> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
>>>> ce(OpenJP
>>>> AConfigurationImpl.java:968)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
>>>> ce(OpenJP
>>>> AConfigurationImpl.java:959)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getMappingRepositoryInsta
>>>> nce(JDBCC
>>>> onfigurationImpl.java:711)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
>>>> kerFactor
>>>> y.java:140)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
>>>> kerFactor
>>>> y.java:164)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.newBrokerImpl(JDBCBrokerFac
>>>> tory.java
>>>> :122)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
>>>> ory.java:
>>>> 209)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
>>>> Factory.j
>>>> ava:156)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>> EntityMan
>>>> agerFactoryImpl.java:227)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>> EntityMan
>>>> agerFactoryImpl.java:154)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
>>>> EntityMan
>>>> agerFactoryImpl.java:60)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
>>>> ResourceU
>>>> tils.java:68)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
>>>> (Resource
>>>> Utils.java:201)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
>>>> ResourceU
>>>> tils.java:223)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
>>>> figuratio
>>>> n(AiravataJPARegistry.java:226)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
>>>> lize(Aira
>>>> vataJPARegistry.java:159)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
>>>> aRegistry
>>>> Factory.java:81)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
>>>> 6)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
>>>> 12)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
>>>> )
>>>> [INFO] [talledLocalContainer] ... 4 more
>>>> [INFO] [talledLocalContainer] Caused by:
>>>> org.apache.commons.dbcp.SQLNestedException: Cannot create
>>>> PoolableConnectionFac
>>>> tory (Schema 'AIRAVATA' does not exist)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
>>>> cDataSour
>>>> ce.java:1549)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
>>>> a:1388)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
>>>> 044)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
>>>> aSource.j
>>>> ava:110)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
>>>> aSource.j
>>>> ava:87)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
>>>> Factory.j
>>>> ava:91)
>>>> [INFO] [talledLocalContainer] ... 31 more
>>>> [INFO] [talledLocalContainer] Caused by:
>>> java.sql.SQLSyntaxErrorException:
>>>> Schema 'AIRAVATA' does not exist
>>>> [INFO] [talledLocalContainer] at
>>>>
>> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
>>>> .java:208
>>>> )
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
>>>> eConnecti
>>>> onFactory.java:658)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
>>>> ource.jav
>>>> a:1558)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
>>>> cDataSour
>>>> ce.java:1545)
>>>> [INFO] [talledLocalContainer] ... 36 more
>>>> [INFO] [talledLocalContainer] Caused by:
>>>> org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not
>> exist
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>>
>> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
>>>> own Sourc
>>>> e)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>>
>>>
>> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>>
>>>
>> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
>>>> Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
>>>> [INFO] [talledLocalContainer] at
>>>> org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
>>>> [INFO] [talledLocalContainer] ... 41 more
>>>>
>>>>
>>>> - Viknes
>>>>
>>>> -----Original Message-----
>>>> From: Saminda Wijeratne [mailto:samindaw@gmail.com]
>>>> Sent: Tuesday, June 18, 2013 12:43 PM
>>>> To: dev@airavata.apache.org
>>>> Subject: Re: [TESTING] Apache Airavata 0.8 RC2
>>>>
>>>> Tested the following using the standard airavata server distribution
>> and
>>> a
>>>> deployment of airavata webapps in a tomcat 7.0.26 distribution,
>>>> 5 & 10 minute tutorial
>>>> API client samples works
>>>> Airavata Client libraries verified for using API
>>>> Successfully built source pack with integration tests but
>>> *without*unit
>>>> tests.
>>>>
>>>> When the source packs were built with tests at airavata-jpa-registry
>>> build
>>>> it waits with the following...
>>>> Tue Jun 18 12:28:15 EDT 2013 : Apache Derby Network Server - 10.9.1.0 -
>>>> (1344872) started and ready to accept connections on port 20000
>> Running a
>>>> query to test the database tables existence.
>>>> Tue Jun 18 12:29:15 EDT 2013 : Could not listen on port 20000 on host
>>>> 127.0.0.1:
>>>> java.net.BindException: Address already in use Running a query to test
>>> the
>>>> database tables existence.
>>>> Tue Jun 18 12:30:16 EDT 2013 : Could not listen on port 20000 on host
>>>> 127.0.0.1:
>>>> java.net.BindException: Address already in use Running a query to test
>>> the
>>>> database tables existence.
>>>> Tue Jun 18 12:31:16 EDT 2013 : Could not listen on port 20000 on host
>>>> 127.0.0.1:
>>>> java.net.BindException: Address already in use Running a query to test
>>> the
>>>> database tables existence.
>>>>
>>>> It is also worth mentioning that when deployed in tomcat I was not able
>>> to
>>>> run the 10 min tutorial without having considerable amount of free
>> memory
>>>> in
>>>> the machine.
>>>> [ERROR] Error while executing provider
>>>> org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
>>>> org.apache.airavata.gfac.GFacException: Error while executing provider
>>>> org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
>>>> at
>> org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:94)
>>>> at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:71)
>>>> at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53)
>>>> at
>>>>
>>>>
>>>
>> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInv
>>>> oker.java:349)
>>>> at
>>>>
>>>>
>>>
>> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(
>>>> WorkflowInterpreter.java:710)
>>>> at
>>>>
>>>>
>>>
>> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically
>>>> (WorkflowInterpreter.java:530)
>>>> at
>>>>
>>>>
>>>
>> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(Workflo
>>>> wInterpreter.java:89)
>>>> at
>>>>
>>>>
>>>
>> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInte
>>>> rpreter.java:197)
>>>> Caused by: org.apache.airavata.gfac.provider.GFacProviderException:
>>> Cannot
>>>> run program "/bin/echo" (in directory
>>>>
>>>>
>>>
>> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
>>>> c427"):
>>>> java.io.IOException: error=12, Cannot allocate memory
>>>> at
>>>>
>>>>
>>>
>> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
>>>> ava:121)
>>>> at
>> org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:92)
>>>> ... 7 more
>>>> Caused by: java.io.IOException: Cannot run program "/bin/echo" (in
>>>> directory
>>>>
>>>>
>>>
>> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
>>>> c427"):
>>>> java.io.IOException: error=12, Cannot allocate memory
>>>> at java.lang.ProcessBuilder.start(ProcessBuilder.java:460)
>>>> at
>>>>
>>>>
>>>
>> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
>>>> ava:84)
>>>> ... 8 more
>>>> Caused by: java.io.IOException: java.io.IOException: error=12, Cannot
>>>> allocate memory
>>>> at java.lang.UNIXProcess.<init>(UNIXProcess.java:148)
>>>> at java.lang.ProcessImpl.start(ProcessImpl.java:65)
>>>> at java.lang.ProcessBuilder.start(ProcessBuilder.java:453)
>>>> ... 9 more
>>>>
>>>> Saminda
>>>>
>>>>
>>>> On Tue, Jun 18, 2013 at 11:47 AM, Lahiru Gunathilake
>>>> <gl...@gmail.com>wrote:
>>>>
>>>>> Done !
>>>>>
>>>>>
>>>>> On Tue, Jun 18, 2013 at 11:30 AM, Saminda Wijeratne
>>>>> <samindaw@gmail.com
>>>>>> wrote:
>>>>>
>>>>>> Hi Lahiru,
>>>>>>
>>>>>> Can you include the source packs as well please.
>>>>>>
>>>>>>
>>>>>>
>>>>>> On Tue, Jun 18, 2013 at 11:23 AM, Chathuri Wimalasena
>>>>>> <ka...@gmail.com>wrote:
>>>>>>
>>>>>>> I tested the following scenarios.
>>>>>>>
>>>>>>> - 5 mins and 10 mins samples with default derby database and
>>>>>>> then
>>>>> with
>>>>>>> mysql database
>>>>>>> - Basic functionalities of XBaya (creating applications,
>>>>>>> creating
>>>>>> hosts,
>>>>>>> deleting, registry browser view, importing and exporting from
>>>>>> registry)
>>>>>>> - Ran two client samples with mysql (create application and
>>>>>>> workflow
>>>>>> run
>>>>>>> samples)
>>>>>>>
>>>>>>> I did not encounter any issues while doing any of the tests. I
>>>>>>> would
>>>>> like
>>>>>>> to suggest a small improvement to workflow run sample. In that
>>>>>>> echo
>>>>>> sample
>>>>>>> we give the input as "ODI Test" but the output we receive is just
>>>>> "ODI".
>>>>>> I
>>>>>>> think we can use a better input value (which does not have a
>> space
>>>>>>> in between).
>>>>>>>
>>>>>>> Regards,
>>>>>>> Chathuri
>>>>>>>
>>>>>>>
>>>>>>> On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake
>>>>>>> <glahiru@gmail.com
>>>>>>>> wrote:
>>>>>>>
>>>>>>>> Hi Devs,
>>>>>>>>
>>>>>>>> Please find the RC2 packs here[1]. If you find any blockers
>>>>>>>> please
>>>>>> raise
>>>>>>> a
>>>>>>>> jira and respond to this email.
>>>>>>>>
>>>>>>>> [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
>>>>>>>> Regards
>>>>>>>>
>>>>>>>> --
>>>>>>>> System Analyst Programmer
>>>>>>>> PTI Lab
>>>>>>>> Indiana University
>>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> System Analyst Programmer
>>>>> PTI Lab
>>>>> Indiana University
>>>>>
>>>>
>>>
>>
>
>
>
> --
> System Analyst Programmer
> PTI Lab
> Indiana University
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Lahiru Gunathilake <gl...@gmail.com>.
Hi All,
I found a blocker[1] and almost fixed.
Will post another RC soon.
[1]https://issues.apache.org/jira/browse/AIRAVATA-872
Regards
Lahiru
On Fri, Jun 21, 2013 at 1:48 PM, Amila Jayasekara
<th...@gmail.com>wrote:
> JNLP Binaries are also verified with tomcat server war with default
> database.
>
> Verified 5 min and 10 min tutorials.
>
> Thanks
> Amila
>
>
> On Tue, Jun 18, 2013 at 2:54 PM, Danushka Menikkumbura <
> danushka.menikkumbura@gmail.com> wrote:
>
> > Hi,
> >
> > I have verified the server and xbaya binary distributions on Windows 7
> > using the 5 min/10 min samples.
> >
> > Thanks,
> > Danushka
> >
> >
> > On Tue, Jun 18, 2013 at 11:54 PM, Viknes Balasubramanee <viknesb@msn.com
> > >wrote:
> >
> > > Hi,
> > >
> > > I got the below error when building from the source in a Windows PC.
> The
> > > integration-test failed.
> > >
> > > [INFO] [talledLocalContainer]
> > >
> > >
> >
> DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby://localhos
> > > t:1527/persist
> > >
> > >
> >
> ent_data;create=true;user=airavata;password=airavata,Username=airavata,Passw
> > > ord=airavata,validationQuery=SELECT 1 from C
> > >
> > >
> >
> onfiguration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=tr
> > > ue,testOnBorrow=true
> > > [INFO] [talledLocalContainer] 48 airavata_data INFO [Thread-6]
> > > openjpa.Runtime - Starting OpenJPA 2.2.0
> > > [INFO] [talledLocalContainer] [ERROR] Error while initializing the
> > Airavata
> > > API
> > > [INFO] [talledLocalContainer]
> > >
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> > > Error while initi
> > > alizing the Airavata API
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > > :64)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > > :43)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > > :39)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.wsmg.msgbox.MsgBoxServiceLifeCycle$1.run(MsgBoxServiceLi
> > > feCycle.j
> > > ava:117)
> > > [INFO] [talledLocalContainer] Caused by:
> > >
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> > > Error
> > > while initializing the Airavata API
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
> > > )
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > > :61)
> > > [INFO] [talledLocalContainer] ... 3 more
> > > [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
> > > fatal general error> org.apache.openjpa.persiste
> > > nce.PersistenceException: Cannot create PoolableConnectionFactory
> (Schema
> > > 'AIRAVATA' does not exist)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> > > Factory.j
> > > ava:102)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
> > > DBCConfig
> > > urationImpl.java:603)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
> > > itory.jav
> > > a:1510)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> > > java:518)
> > >
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> > > java:443)
> > >
> > > [INFO] [talledLocalContainer] at
> > >
> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
> > > ryValue.j
> > > ava:68)
> > > [INFO] [talledLocalContainer] at
> > >
> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
> > > ce(OpenJP
> > > AConfigurationImpl.java:968)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
> > > ce(OpenJP
> > > AConfigurationImpl.java:959)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.kernel.AbstractBrokerFactory.makeReadOnly(AbstractBrokerF
> > > actory.ja
> > > va:638)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
> > > ory.java:
> > > 203)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
> > > Factory.j
> > > ava:156)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > > EntityMan
> > > agerFactoryImpl.java:227)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > > EntityMan
> > > agerFactoryImpl.java:154)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > > EntityMan
> > > agerFactoryImpl.java:60)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
> > > ResourceU
> > > tils.java:68)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
> > > (Resource
> > > Utils.java:201)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
> > > ResourceU
> > > tils.java:223)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
> > > figuratio
> > > n(AiravataJPARegistry.java:226)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
> > > lize(Aira
> > > vataJPARegistry.java:159)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
> > > aRegistry
> > > Factory.java:81)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
> > > 6)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
> > > 12)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
> > > )
> > > [INFO] [talledLocalContainer] ... 4 more
> > > [INFO] [talledLocalContainer] Caused by:
> > > org.apache.commons.dbcp.SQLNestedException: Cannot create
> > > PoolableConnectionFac
> > > tory (Schema 'AIRAVATA' does not exist)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> > > cDataSour
> > > ce.java:1549)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
> > > a:1388)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
> > > 044)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
> > > aSource.j
> > > ava:110)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
> > > aSource.j
> > > ava:87)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> > > Factory.j
> > > ava:91)
> > > [INFO] [talledLocalContainer] ... 28 more
> > > [INFO] [talledLocalContainer] Caused by:
> > java.sql.SQLSyntaxErrorException:
> > > Schema 'AIRAVATA' does not exist
> > > [INFO] [talledLocalContainer] at
> > >
> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
> > > .java:208
> > > )
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
> > > eConnecti
> > > onFactory.java:658)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
> > > ource.jav
> > > a:1558)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> > > cDataSour
> > > ce.java:1545)
> > > [INFO] [talledLocalContainer] ... 33 more
> > > [INFO] [talledLocalContainer] Caused by:
> > > org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not
> exist
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > >
> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
> > > own Sourc
> > > e)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > >
> >
> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
> > > [INFO] [talledLocalContainer] ... 38 more
> > > [INFO] [talledLocalContainer] [ERROR] Error while initializing the
> > Airavata
> > > API
> > > [INFO] [talledLocalContainer]
> > >
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> > > Error while initi
> > > alizing the Airavata API
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > > :64)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > > :43)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > > :39)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.wsmg.broker.BrokerServiceLifeCycle$1.run(BrokerServiceLi
> > > feCycle.j
> > > ava:156)
> > > [INFO] [talledLocalContainer] Caused by:
> > >
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> > > Error
> > > while initializing the Airavata API
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
> > > )
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > > :61)
> > > [INFO] [talledLocalContainer] ... 3 more
> > > [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
> > > fatal general error> org.apache.openjpa.persiste
> > > nce.PersistenceException: Cannot create PoolableConnectionFactory
> (Schema
> > > 'AIRAVATA' does not exist)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> > > Factory.j
> > > ava:102)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
> > > DBCConfig
> > > urationImpl.java:603)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
> > > itory.jav
> > > a:1510)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> > > java:518)
> > >
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> > > java:443)
> > >
> > > [INFO] [talledLocalContainer] at
> > >
> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
> > > ryValue.j
> > > ava:68)
> > > [INFO] [talledLocalContainer] at
> > >
> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
> > > ce(OpenJP
> > > AConfigurationImpl.java:968)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
> > > ce(OpenJP
> > > AConfigurationImpl.java:959)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getMappingRepositoryInsta
> > > nce(JDBCC
> > > onfigurationImpl.java:711)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
> > > kerFactor
> > > y.java:140)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
> > > kerFactor
> > > y.java:164)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.newBrokerImpl(JDBCBrokerFac
> > > tory.java
> > > :122)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
> > > ory.java:
> > > 209)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
> > > Factory.j
> > > ava:156)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > > EntityMan
> > > agerFactoryImpl.java:227)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > > EntityMan
> > > agerFactoryImpl.java:154)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > > EntityMan
> > > agerFactoryImpl.java:60)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
> > > ResourceU
> > > tils.java:68)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
> > > (Resource
> > > Utils.java:201)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
> > > ResourceU
> > > tils.java:223)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
> > > figuratio
> > > n(AiravataJPARegistry.java:226)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
> > > lize(Aira
> > > vataJPARegistry.java:159)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
> > > aRegistry
> > > Factory.java:81)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
> > > 6)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
> > > 12)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
> > > )
> > > [INFO] [talledLocalContainer] ... 4 more
> > > [INFO] [talledLocalContainer] Caused by:
> > > org.apache.commons.dbcp.SQLNestedException: Cannot create
> > > PoolableConnectionFac
> > > tory (Schema 'AIRAVATA' does not exist)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> > > cDataSour
> > > ce.java:1549)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
> > > a:1388)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
> > > 044)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
> > > aSource.j
> > > ava:110)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
> > > aSource.j
> > > ava:87)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> > > Factory.j
> > > ava:91)
> > > [INFO] [talledLocalContainer] ... 31 more
> > > [INFO] [talledLocalContainer] Caused by:
> > java.sql.SQLSyntaxErrorException:
> > > Schema 'AIRAVATA' does not exist
> > > [INFO] [talledLocalContainer] at
> > >
> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
> > > .java:208
> > > )
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
> > > eConnecti
> > > onFactory.java:658)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
> > > ource.jav
> > > a:1558)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> > > cDataSour
> > > ce.java:1545)
> > > [INFO] [talledLocalContainer] ... 36 more
> > > [INFO] [talledLocalContainer] Caused by:
> > > org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not
> exist
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > >
> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
> > > own Sourc
> > > e)
> > > [INFO] [talledLocalContainer] at
> > >
> > >
> >
> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > >
> >
> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
> > > Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
> > > [INFO] [talledLocalContainer] at
> > > org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
> > > [INFO] [talledLocalContainer] ... 41 more
> > >
> > >
> > > - Viknes
> > >
> > > -----Original Message-----
> > > From: Saminda Wijeratne [mailto:samindaw@gmail.com]
> > > Sent: Tuesday, June 18, 2013 12:43 PM
> > > To: dev@airavata.apache.org
> > > Subject: Re: [TESTING] Apache Airavata 0.8 RC2
> > >
> > > Tested the following using the standard airavata server distribution
> and
> > a
> > > deployment of airavata webapps in a tomcat 7.0.26 distribution,
> > > 5 & 10 minute tutorial
> > > API client samples works
> > > Airavata Client libraries verified for using API
> > > Successfully built source pack with integration tests but
> > *without*unit
> > > tests.
> > >
> > > When the source packs were built with tests at airavata-jpa-registry
> > build
> > > it waits with the following...
> > > Tue Jun 18 12:28:15 EDT 2013 : Apache Derby Network Server - 10.9.1.0 -
> > > (1344872) started and ready to accept connections on port 20000
> Running a
> > > query to test the database tables existence.
> > > Tue Jun 18 12:29:15 EDT 2013 : Could not listen on port 20000 on host
> > > 127.0.0.1:
> > > java.net.BindException: Address already in use Running a query to test
> > the
> > > database tables existence.
> > > Tue Jun 18 12:30:16 EDT 2013 : Could not listen on port 20000 on host
> > > 127.0.0.1:
> > > java.net.BindException: Address already in use Running a query to test
> > the
> > > database tables existence.
> > > Tue Jun 18 12:31:16 EDT 2013 : Could not listen on port 20000 on host
> > > 127.0.0.1:
> > > java.net.BindException: Address already in use Running a query to test
> > the
> > > database tables existence.
> > >
> > > It is also worth mentioning that when deployed in tomcat I was not able
> > to
> > > run the 10 min tutorial without having considerable amount of free
> memory
> > > in
> > > the machine.
> > > [ERROR] Error while executing provider
> > > org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
> > > org.apache.airavata.gfac.GFacException: Error while executing provider
> > > org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
> > > at
> org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:94)
> > > at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:71)
> > > at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53)
> > > at
> > >
> > >
> >
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInv
> > > oker.java:349)
> > > at
> > >
> > >
> >
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(
> > > WorkflowInterpreter.java:710)
> > > at
> > >
> > >
> >
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically
> > > (WorkflowInterpreter.java:530)
> > > at
> > >
> > >
> >
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(Workflo
> > > wInterpreter.java:89)
> > > at
> > >
> > >
> >
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInte
> > > rpreter.java:197)
> > > Caused by: org.apache.airavata.gfac.provider.GFacProviderException:
> > Cannot
> > > run program "/bin/echo" (in directory
> > >
> > >
> >
> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
> > > c427"):
> > > java.io.IOException: error=12, Cannot allocate memory
> > > at
> > >
> > >
> >
> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
> > > ava:121)
> > > at
> org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:92)
> > > ... 7 more
> > > Caused by: java.io.IOException: Cannot run program "/bin/echo" (in
> > > directory
> > >
> > >
> >
> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
> > > c427"):
> > > java.io.IOException: error=12, Cannot allocate memory
> > > at java.lang.ProcessBuilder.start(ProcessBuilder.java:460)
> > > at
> > >
> > >
> >
> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
> > > ava:84)
> > > ... 8 more
> > > Caused by: java.io.IOException: java.io.IOException: error=12, Cannot
> > > allocate memory
> > > at java.lang.UNIXProcess.<init>(UNIXProcess.java:148)
> > > at java.lang.ProcessImpl.start(ProcessImpl.java:65)
> > > at java.lang.ProcessBuilder.start(ProcessBuilder.java:453)
> > > ... 9 more
> > >
> > > Saminda
> > >
> > >
> > > On Tue, Jun 18, 2013 at 11:47 AM, Lahiru Gunathilake
> > > <gl...@gmail.com>wrote:
> > >
> > > > Done !
> > > >
> > > >
> > > > On Tue, Jun 18, 2013 at 11:30 AM, Saminda Wijeratne
> > > > <samindaw@gmail.com
> > > > >wrote:
> > > >
> > > > > Hi Lahiru,
> > > > >
> > > > > Can you include the source packs as well please.
> > > > >
> > > > >
> > > > >
> > > > > On Tue, Jun 18, 2013 at 11:23 AM, Chathuri Wimalasena
> > > > > <ka...@gmail.com>wrote:
> > > > >
> > > > > > I tested the following scenarios.
> > > > > >
> > > > > > - 5 mins and 10 mins samples with default derby database and
> > > > > > then
> > > > with
> > > > > > mysql database
> > > > > > - Basic functionalities of XBaya (creating applications,
> > > > > > creating
> > > > > hosts,
> > > > > > deleting, registry browser view, importing and exporting from
> > > > > registry)
> > > > > > - Ran two client samples with mysql (create application and
> > > > > > workflow
> > > > > run
> > > > > > samples)
> > > > > >
> > > > > > I did not encounter any issues while doing any of the tests. I
> > > > > > would
> > > > like
> > > > > > to suggest a small improvement to workflow run sample. In that
> > > > > > echo
> > > > > sample
> > > > > > we give the input as "ODI Test" but the output we receive is just
> > > > "ODI".
> > > > > I
> > > > > > think we can use a better input value (which does not have a
> space
> > > > > > in between).
> > > > > >
> > > > > > Regards,
> > > > > > Chathuri
> > > > > >
> > > > > >
> > > > > > On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake
> > > > > > <glahiru@gmail.com
> > > > > > >wrote:
> > > > > >
> > > > > > > Hi Devs,
> > > > > > >
> > > > > > > Please find the RC2 packs here[1]. If you find any blockers
> > > > > > > please
> > > > > raise
> > > > > > a
> > > > > > > jira and respond to this email.
> > > > > > >
> > > > > > > [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
> > > > > > > Regards
> > > > > > >
> > > > > > > --
> > > > > > > System Analyst Programmer
> > > > > > > PTI Lab
> > > > > > > Indiana University
> > > > > > >
> > > > > >
> > > > >
> > > >
> > > >
> > > >
> > > > --
> > > > System Analyst Programmer
> > > > PTI Lab
> > > > Indiana University
> > > >
> > >
> >
>
--
System Analyst Programmer
PTI Lab
Indiana University
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Amila Jayasekara <th...@gmail.com>.
JNLP Binaries are also verified with tomcat server war with default
database.
Verified 5 min and 10 min tutorials.
Thanks
Amila
On Tue, Jun 18, 2013 at 2:54 PM, Danushka Menikkumbura <
danushka.menikkumbura@gmail.com> wrote:
> Hi,
>
> I have verified the server and xbaya binary distributions on Windows 7
> using the 5 min/10 min samples.
>
> Thanks,
> Danushka
>
>
> On Tue, Jun 18, 2013 at 11:54 PM, Viknes Balasubramanee <viknesb@msn.com
> >wrote:
>
> > Hi,
> >
> > I got the below error when building from the source in a Windows PC. The
> > integration-test failed.
> >
> > [INFO] [talledLocalContainer]
> >
> >
> DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby://localhos
> > t:1527/persist
> >
> >
> ent_data;create=true;user=airavata;password=airavata,Username=airavata,Passw
> > ord=airavata,validationQuery=SELECT 1 from C
> >
> >
> onfiguration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=tr
> > ue,testOnBorrow=true
> > [INFO] [talledLocalContainer] 48 airavata_data INFO [Thread-6]
> > openjpa.Runtime - Starting OpenJPA 2.2.0
> > [INFO] [talledLocalContainer] [ERROR] Error while initializing the
> Airavata
> > API
> > [INFO] [talledLocalContainer]
> > org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> > Error while initi
> > alizing the Airavata API
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > :64)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > :43)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > :39)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.wsmg.msgbox.MsgBoxServiceLifeCycle$1.run(MsgBoxServiceLi
> > feCycle.j
> > ava:117)
> > [INFO] [talledLocalContainer] Caused by:
> > org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> > Error
> > while initializing the Airavata API
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
> > )
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > :61)
> > [INFO] [talledLocalContainer] ... 3 more
> > [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
> > fatal general error> org.apache.openjpa.persiste
> > nce.PersistenceException: Cannot create PoolableConnectionFactory (Schema
> > 'AIRAVATA' does not exist)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> > Factory.j
> > ava:102)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
> > DBCConfig
> > urationImpl.java:603)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
> > itory.jav
> > a:1510)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> > java:518)
> >
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> > java:443)
> >
> > [INFO] [talledLocalContainer] at
> > org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
> > ryValue.j
> > ava:68)
> > [INFO] [talledLocalContainer] at
> > org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
> > ce(OpenJP
> > AConfigurationImpl.java:968)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
> > ce(OpenJP
> > AConfigurationImpl.java:959)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.kernel.AbstractBrokerFactory.makeReadOnly(AbstractBrokerF
> > actory.ja
> > va:638)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
> > ory.java:
> > 203)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
> > Factory.j
> > ava:156)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > EntityMan
> > agerFactoryImpl.java:227)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > EntityMan
> > agerFactoryImpl.java:154)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > EntityMan
> > agerFactoryImpl.java:60)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
> > ResourceU
> > tils.java:68)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
> > (Resource
> > Utils.java:201)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
> > ResourceU
> > tils.java:223)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
> > figuratio
> > n(AiravataJPARegistry.java:226)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
> > lize(Aira
> > vataJPARegistry.java:159)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
> > aRegistry
> > Factory.java:81)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
> > 6)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
> > 12)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
> > )
> > [INFO] [talledLocalContainer] ... 4 more
> > [INFO] [talledLocalContainer] Caused by:
> > org.apache.commons.dbcp.SQLNestedException: Cannot create
> > PoolableConnectionFac
> > tory (Schema 'AIRAVATA' does not exist)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> > cDataSour
> > ce.java:1549)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
> > a:1388)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
> > 044)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
> > aSource.j
> > ava:110)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
> > aSource.j
> > ava:87)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> > Factory.j
> > ava:91)
> > [INFO] [talledLocalContainer] ... 28 more
> > [INFO] [talledLocalContainer] Caused by:
> java.sql.SQLSyntaxErrorException:
> > Schema 'AIRAVATA' does not exist
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
> > .java:208
> > )
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
> > eConnecti
> > onFactory.java:658)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
> > ource.jav
> > a:1558)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> > cDataSour
> > ce.java:1545)
> > [INFO] [talledLocalContainer] ... 33 more
> > [INFO] [talledLocalContainer] Caused by:
> > org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not exist
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
> > own Sourc
> > e)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> >
> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
> > [INFO] [talledLocalContainer] ... 38 more
> > [INFO] [talledLocalContainer] [ERROR] Error while initializing the
> Airavata
> > API
> > [INFO] [talledLocalContainer]
> > org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> > Error while initi
> > alizing the Airavata API
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > :64)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > :43)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > :39)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.wsmg.broker.BrokerServiceLifeCycle$1.run(BrokerServiceLi
> > feCycle.j
> > ava:156)
> > [INFO] [talledLocalContainer] Caused by:
> > org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> > Error
> > while initializing the Airavata API
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
> > )
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> > :61)
> > [INFO] [talledLocalContainer] ... 3 more
> > [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
> > fatal general error> org.apache.openjpa.persiste
> > nce.PersistenceException: Cannot create PoolableConnectionFactory (Schema
> > 'AIRAVATA' does not exist)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> > Factory.j
> > ava:102)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
> > DBCConfig
> > urationImpl.java:603)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
> > itory.jav
> > a:1510)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> > java:518)
> >
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> > java:443)
> >
> > [INFO] [talledLocalContainer] at
> > org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
> > ryValue.j
> > ava:68)
> > [INFO] [talledLocalContainer] at
> > org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
> > ce(OpenJP
> > AConfigurationImpl.java:968)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
> > ce(OpenJP
> > AConfigurationImpl.java:959)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getMappingRepositoryInsta
> > nce(JDBCC
> > onfigurationImpl.java:711)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
> > kerFactor
> > y.java:140)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
> > kerFactor
> > y.java:164)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.newBrokerImpl(JDBCBrokerFac
> > tory.java
> > :122)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
> > ory.java:
> > 209)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
> > Factory.j
> > ava:156)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > EntityMan
> > agerFactoryImpl.java:227)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > EntityMan
> > agerFactoryImpl.java:154)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> > EntityMan
> > agerFactoryImpl.java:60)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
> > ResourceU
> > tils.java:68)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
> > (Resource
> > Utils.java:201)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
> > ResourceU
> > tils.java:223)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
> > figuratio
> > n(AiravataJPARegistry.java:226)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
> > lize(Aira
> > vataJPARegistry.java:159)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
> > aRegistry
> > Factory.java:81)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
> > 6)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
> > 12)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
> > )
> > [INFO] [talledLocalContainer] ... 4 more
> > [INFO] [talledLocalContainer] Caused by:
> > org.apache.commons.dbcp.SQLNestedException: Cannot create
> > PoolableConnectionFac
> > tory (Schema 'AIRAVATA' does not exist)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> > cDataSour
> > ce.java:1549)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
> > a:1388)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
> > 044)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
> > aSource.j
> > ava:110)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
> > aSource.j
> > ava:87)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> > Factory.j
> > ava:91)
> > [INFO] [talledLocalContainer] ... 31 more
> > [INFO] [talledLocalContainer] Caused by:
> java.sql.SQLSyntaxErrorException:
> > Schema 'AIRAVATA' does not exist
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
> > .java:208
> > )
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
> > eConnecti
> > onFactory.java:658)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
> > ource.jav
> > a:1558)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> > cDataSour
> > ce.java:1545)
> > [INFO] [talledLocalContainer] ... 36 more
> > [INFO] [talledLocalContainer] Caused by:
> > org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not exist
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
> > own Sourc
> > e)
> > [INFO] [talledLocalContainer] at
> >
> >
> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> >
> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
> > Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
> > [INFO] [talledLocalContainer] at
> > org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
> > [INFO] [talledLocalContainer] ... 41 more
> >
> >
> > - Viknes
> >
> > -----Original Message-----
> > From: Saminda Wijeratne [mailto:samindaw@gmail.com]
> > Sent: Tuesday, June 18, 2013 12:43 PM
> > To: dev@airavata.apache.org
> > Subject: Re: [TESTING] Apache Airavata 0.8 RC2
> >
> > Tested the following using the standard airavata server distribution and
> a
> > deployment of airavata webapps in a tomcat 7.0.26 distribution,
> > 5 & 10 minute tutorial
> > API client samples works
> > Airavata Client libraries verified for using API
> > Successfully built source pack with integration tests but
> *without*unit
> > tests.
> >
> > When the source packs were built with tests at airavata-jpa-registry
> build
> > it waits with the following...
> > Tue Jun 18 12:28:15 EDT 2013 : Apache Derby Network Server - 10.9.1.0 -
> > (1344872) started and ready to accept connections on port 20000 Running a
> > query to test the database tables existence.
> > Tue Jun 18 12:29:15 EDT 2013 : Could not listen on port 20000 on host
> > 127.0.0.1:
> > java.net.BindException: Address already in use Running a query to test
> the
> > database tables existence.
> > Tue Jun 18 12:30:16 EDT 2013 : Could not listen on port 20000 on host
> > 127.0.0.1:
> > java.net.BindException: Address already in use Running a query to test
> the
> > database tables existence.
> > Tue Jun 18 12:31:16 EDT 2013 : Could not listen on port 20000 on host
> > 127.0.0.1:
> > java.net.BindException: Address already in use Running a query to test
> the
> > database tables existence.
> >
> > It is also worth mentioning that when deployed in tomcat I was not able
> to
> > run the 10 min tutorial without having considerable amount of free memory
> > in
> > the machine.
> > [ERROR] Error while executing provider
> > org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
> > org.apache.airavata.gfac.GFacException: Error while executing provider
> > org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
> > at org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:94)
> > at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:71)
> > at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53)
> > at
> >
> >
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInv
> > oker.java:349)
> > at
> >
> >
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(
> > WorkflowInterpreter.java:710)
> > at
> >
> >
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically
> > (WorkflowInterpreter.java:530)
> > at
> >
> >
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(Workflo
> > wInterpreter.java:89)
> > at
> >
> >
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInte
> > rpreter.java:197)
> > Caused by: org.apache.airavata.gfac.provider.GFacProviderException:
> Cannot
> > run program "/bin/echo" (in directory
> >
> >
> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
> > c427"):
> > java.io.IOException: error=12, Cannot allocate memory
> > at
> >
> >
> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
> > ava:121)
> > at org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:92)
> > ... 7 more
> > Caused by: java.io.IOException: Cannot run program "/bin/echo" (in
> > directory
> >
> >
> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
> > c427"):
> > java.io.IOException: error=12, Cannot allocate memory
> > at java.lang.ProcessBuilder.start(ProcessBuilder.java:460)
> > at
> >
> >
> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
> > ava:84)
> > ... 8 more
> > Caused by: java.io.IOException: java.io.IOException: error=12, Cannot
> > allocate memory
> > at java.lang.UNIXProcess.<init>(UNIXProcess.java:148)
> > at java.lang.ProcessImpl.start(ProcessImpl.java:65)
> > at java.lang.ProcessBuilder.start(ProcessBuilder.java:453)
> > ... 9 more
> >
> > Saminda
> >
> >
> > On Tue, Jun 18, 2013 at 11:47 AM, Lahiru Gunathilake
> > <gl...@gmail.com>wrote:
> >
> > > Done !
> > >
> > >
> > > On Tue, Jun 18, 2013 at 11:30 AM, Saminda Wijeratne
> > > <samindaw@gmail.com
> > > >wrote:
> > >
> > > > Hi Lahiru,
> > > >
> > > > Can you include the source packs as well please.
> > > >
> > > >
> > > >
> > > > On Tue, Jun 18, 2013 at 11:23 AM, Chathuri Wimalasena
> > > > <ka...@gmail.com>wrote:
> > > >
> > > > > I tested the following scenarios.
> > > > >
> > > > > - 5 mins and 10 mins samples with default derby database and
> > > > > then
> > > with
> > > > > mysql database
> > > > > - Basic functionalities of XBaya (creating applications,
> > > > > creating
> > > > hosts,
> > > > > deleting, registry browser view, importing and exporting from
> > > > registry)
> > > > > - Ran two client samples with mysql (create application and
> > > > > workflow
> > > > run
> > > > > samples)
> > > > >
> > > > > I did not encounter any issues while doing any of the tests. I
> > > > > would
> > > like
> > > > > to suggest a small improvement to workflow run sample. In that
> > > > > echo
> > > > sample
> > > > > we give the input as "ODI Test" but the output we receive is just
> > > "ODI".
> > > > I
> > > > > think we can use a better input value (which does not have a space
> > > > > in between).
> > > > >
> > > > > Regards,
> > > > > Chathuri
> > > > >
> > > > >
> > > > > On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake
> > > > > <glahiru@gmail.com
> > > > > >wrote:
> > > > >
> > > > > > Hi Devs,
> > > > > >
> > > > > > Please find the RC2 packs here[1]. If you find any blockers
> > > > > > please
> > > > raise
> > > > > a
> > > > > > jira and respond to this email.
> > > > > >
> > > > > > [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
> > > > > > Regards
> > > > > >
> > > > > > --
> > > > > > System Analyst Programmer
> > > > > > PTI Lab
> > > > > > Indiana University
> > > > > >
> > > > >
> > > >
> > >
> > >
> > >
> > > --
> > > System Analyst Programmer
> > > PTI Lab
> > > Indiana University
> > >
> >
>
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Danushka Menikkumbura <da...@gmail.com>.
Hi,
I have verified the server and xbaya binary distributions on Windows 7
using the 5 min/10 min samples.
Thanks,
Danushka
On Tue, Jun 18, 2013 at 11:54 PM, Viknes Balasubramanee <vi...@msn.com>wrote:
> Hi,
>
> I got the below error when building from the source in a Windows PC. The
> integration-test failed.
>
> [INFO] [talledLocalContainer]
>
> DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby://localhos
> t:1527/persist
>
> ent_data;create=true;user=airavata;password=airavata,Username=airavata,Passw
> ord=airavata,validationQuery=SELECT 1 from C
>
> onfiguration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=tr
> ue,testOnBorrow=true
> [INFO] [talledLocalContainer] 48 airavata_data INFO [Thread-6]
> openjpa.Runtime - Starting OpenJPA 2.2.0
> [INFO] [talledLocalContainer] [ERROR] Error while initializing the Airavata
> API
> [INFO] [talledLocalContainer]
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> Error while initi
> alizing the Airavata API
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> :64)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> :43)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> :39)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.wsmg.msgbox.MsgBoxServiceLifeCycle$1.run(MsgBoxServiceLi
> feCycle.j
> ava:117)
> [INFO] [talledLocalContainer] Caused by:
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> Error
> while initializing the Airavata API
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
> )
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> :61)
> [INFO] [talledLocalContainer] ... 3 more
> [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
> fatal general error> org.apache.openjpa.persiste
> nce.PersistenceException: Cannot create PoolableConnectionFactory (Schema
> 'AIRAVATA' does not exist)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> Factory.j
> ava:102)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
> DBCConfig
> urationImpl.java:603)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
> itory.jav
> a:1510)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> java:518)
>
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> java:443)
>
> [INFO] [talledLocalContainer] at
> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
> ryValue.j
> ava:68)
> [INFO] [talledLocalContainer] at
> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
> ce(OpenJP
> AConfigurationImpl.java:968)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
> ce(OpenJP
> AConfigurationImpl.java:959)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.kernel.AbstractBrokerFactory.makeReadOnly(AbstractBrokerF
> actory.ja
> va:638)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
> ory.java:
> 203)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
> Factory.j
> ava:156)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> EntityMan
> agerFactoryImpl.java:227)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> EntityMan
> agerFactoryImpl.java:154)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> EntityMan
> agerFactoryImpl.java:60)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
> ResourceU
> tils.java:68)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
> (Resource
> Utils.java:201)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
> ResourceU
> tils.java:223)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
> figuratio
> n(AiravataJPARegistry.java:226)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
> lize(Aira
> vataJPARegistry.java:159)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
> aRegistry
> Factory.java:81)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
> 6)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
> 12)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
> )
> [INFO] [talledLocalContainer] ... 4 more
> [INFO] [talledLocalContainer] Caused by:
> org.apache.commons.dbcp.SQLNestedException: Cannot create
> PoolableConnectionFac
> tory (Schema 'AIRAVATA' does not exist)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> cDataSour
> ce.java:1549)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
> a:1388)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
> 044)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
> aSource.j
> ava:110)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
> aSource.j
> ava:87)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> Factory.j
> ava:91)
> [INFO] [talledLocalContainer] ... 28 more
> [INFO] [talledLocalContainer] Caused by: java.sql.SQLSyntaxErrorException:
> Schema 'AIRAVATA' does not exist
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
> .java:208
> )
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
> eConnecti
> onFactory.java:658)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
> ource.jav
> a:1558)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> cDataSour
> ce.java:1545)
> [INFO] [talledLocalContainer] ... 33 more
> [INFO] [talledLocalContainer] Caused by:
> org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not exist
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
> Source)
> [INFO] [talledLocalContainer] at
>
> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
> own Sourc
> e)
> [INFO] [talledLocalContainer] at
>
> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
> [INFO] [talledLocalContainer] ... 38 more
> [INFO] [talledLocalContainer] [ERROR] Error while initializing the Airavata
> API
> [INFO] [talledLocalContainer]
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> Error while initi
> alizing the Airavata API
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> :64)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> :43)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> :39)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.wsmg.broker.BrokerServiceLifeCycle$1.run(BrokerServiceLi
> feCycle.j
> ava:156)
> [INFO] [talledLocalContainer] Caused by:
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> Error
> while initializing the Airavata API
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
> )
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
> :61)
> [INFO] [talledLocalContainer] ... 3 more
> [INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
> fatal general error> org.apache.openjpa.persiste
> nce.PersistenceException: Cannot create PoolableConnectionFactory (Schema
> 'AIRAVATA' does not exist)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> Factory.j
> ava:102)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
> DBCConfig
> urationImpl.java:603)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
> itory.jav
> a:1510)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> java:518)
>
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> java:443)
>
> [INFO] [talledLocalContainer] at
> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
> ryValue.j
> ava:68)
> [INFO] [talledLocalContainer] at
> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
> ce(OpenJP
> AConfigurationImpl.java:968)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
> ce(OpenJP
> AConfigurationImpl.java:959)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getMappingRepositoryInsta
> nce(JDBCC
> onfigurationImpl.java:711)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
> kerFactor
> y.java:140)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
> kerFactor
> y.java:164)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.newBrokerImpl(JDBCBrokerFac
> tory.java
> :122)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
> ory.java:
> 209)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
> Factory.j
> ava:156)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> EntityMan
> agerFactoryImpl.java:227)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> EntityMan
> agerFactoryImpl.java:154)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
> EntityMan
> agerFactoryImpl.java:60)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
> ResourceU
> tils.java:68)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
> (Resource
> Utils.java:201)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
> ResourceU
> tils.java:223)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
> figuratio
> n(AiravataJPARegistry.java:226)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
> lize(Aira
> vataJPARegistry.java:159)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
> aRegistry
> Factory.java:81)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
> 6)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
> 12)
> [INFO] [talledLocalContainer] at
>
> org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
> )
> [INFO] [talledLocalContainer] ... 4 more
> [INFO] [talledLocalContainer] Caused by:
> org.apache.commons.dbcp.SQLNestedException: Cannot create
> PoolableConnectionFac
> tory (Schema 'AIRAVATA' does not exist)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> cDataSour
> ce.java:1549)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
> a:1388)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
> 044)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
> aSource.j
> ava:110)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
> aSource.j
> ava:87)
> [INFO] [talledLocalContainer] at
>
> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
> Factory.j
> ava:91)
> [INFO] [talledLocalContainer] ... 31 more
> [INFO] [talledLocalContainer] Caused by: java.sql.SQLSyntaxErrorException:
> Schema 'AIRAVATA' does not exist
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
> .java:208
> )
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
> eConnecti
> onFactory.java:658)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
> ource.jav
> a:1558)
> [INFO] [talledLocalContainer] at
>
> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
> cDataSour
> ce.java:1545)
> [INFO] [talledLocalContainer] ... 36 more
> [INFO] [talledLocalContainer] Caused by:
> org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not exist
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
> Source)
> [INFO] [talledLocalContainer] at
>
> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
> own Sourc
> e)
> [INFO] [talledLocalContainer] at
>
> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
> Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
> [INFO] [talledLocalContainer] at
> org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
> [INFO] [talledLocalContainer] ... 41 more
>
>
> - Viknes
>
> -----Original Message-----
> From: Saminda Wijeratne [mailto:samindaw@gmail.com]
> Sent: Tuesday, June 18, 2013 12:43 PM
> To: dev@airavata.apache.org
> Subject: Re: [TESTING] Apache Airavata 0.8 RC2
>
> Tested the following using the standard airavata server distribution and a
> deployment of airavata webapps in a tomcat 7.0.26 distribution,
> 5 & 10 minute tutorial
> API client samples works
> Airavata Client libraries verified for using API
> Successfully built source pack with integration tests but *without*unit
> tests.
>
> When the source packs were built with tests at airavata-jpa-registry build
> it waits with the following...
> Tue Jun 18 12:28:15 EDT 2013 : Apache Derby Network Server - 10.9.1.0 -
> (1344872) started and ready to accept connections on port 20000 Running a
> query to test the database tables existence.
> Tue Jun 18 12:29:15 EDT 2013 : Could not listen on port 20000 on host
> 127.0.0.1:
> java.net.BindException: Address already in use Running a query to test the
> database tables existence.
> Tue Jun 18 12:30:16 EDT 2013 : Could not listen on port 20000 on host
> 127.0.0.1:
> java.net.BindException: Address already in use Running a query to test the
> database tables existence.
> Tue Jun 18 12:31:16 EDT 2013 : Could not listen on port 20000 on host
> 127.0.0.1:
> java.net.BindException: Address already in use Running a query to test the
> database tables existence.
>
> It is also worth mentioning that when deployed in tomcat I was not able to
> run the 10 min tutorial without having considerable amount of free memory
> in
> the machine.
> [ERROR] Error while executing provider
> org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
> org.apache.airavata.gfac.GFacException: Error while executing provider
> org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
> at org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:94)
> at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:71)
> at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53)
> at
>
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInv
> oker.java:349)
> at
>
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(
> WorkflowInterpreter.java:710)
> at
>
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically
> (WorkflowInterpreter.java:530)
> at
>
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(Workflo
> wInterpreter.java:89)
> at
>
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInte
> rpreter.java:197)
> Caused by: org.apache.airavata.gfac.provider.GFacProviderException: Cannot
> run program "/bin/echo" (in directory
>
> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
> c427"):
> java.io.IOException: error=12, Cannot allocate memory
> at
>
> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
> ava:121)
> at org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:92)
> ... 7 more
> Caused by: java.io.IOException: Cannot run program "/bin/echo" (in
> directory
>
> "/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
> c427"):
> java.io.IOException: error=12, Cannot allocate memory
> at java.lang.ProcessBuilder.start(ProcessBuilder.java:460)
> at
>
> org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
> ava:84)
> ... 8 more
> Caused by: java.io.IOException: java.io.IOException: error=12, Cannot
> allocate memory
> at java.lang.UNIXProcess.<init>(UNIXProcess.java:148)
> at java.lang.ProcessImpl.start(ProcessImpl.java:65)
> at java.lang.ProcessBuilder.start(ProcessBuilder.java:453)
> ... 9 more
>
> Saminda
>
>
> On Tue, Jun 18, 2013 at 11:47 AM, Lahiru Gunathilake
> <gl...@gmail.com>wrote:
>
> > Done !
> >
> >
> > On Tue, Jun 18, 2013 at 11:30 AM, Saminda Wijeratne
> > <samindaw@gmail.com
> > >wrote:
> >
> > > Hi Lahiru,
> > >
> > > Can you include the source packs as well please.
> > >
> > >
> > >
> > > On Tue, Jun 18, 2013 at 11:23 AM, Chathuri Wimalasena
> > > <ka...@gmail.com>wrote:
> > >
> > > > I tested the following scenarios.
> > > >
> > > > - 5 mins and 10 mins samples with default derby database and
> > > > then
> > with
> > > > mysql database
> > > > - Basic functionalities of XBaya (creating applications,
> > > > creating
> > > hosts,
> > > > deleting, registry browser view, importing and exporting from
> > > registry)
> > > > - Ran two client samples with mysql (create application and
> > > > workflow
> > > run
> > > > samples)
> > > >
> > > > I did not encounter any issues while doing any of the tests. I
> > > > would
> > like
> > > > to suggest a small improvement to workflow run sample. In that
> > > > echo
> > > sample
> > > > we give the input as "ODI Test" but the output we receive is just
> > "ODI".
> > > I
> > > > think we can use a better input value (which does not have a space
> > > > in between).
> > > >
> > > > Regards,
> > > > Chathuri
> > > >
> > > >
> > > > On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake
> > > > <glahiru@gmail.com
> > > > >wrote:
> > > >
> > > > > Hi Devs,
> > > > >
> > > > > Please find the RC2 packs here[1]. If you find any blockers
> > > > > please
> > > raise
> > > > a
> > > > > jira and respond to this email.
> > > > >
> > > > > [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
> > > > > Regards
> > > > >
> > > > > --
> > > > > System Analyst Programmer
> > > > > PTI Lab
> > > > > Indiana University
> > > > >
> > > >
> > >
> >
> >
> >
> > --
> > System Analyst Programmer
> > PTI Lab
> > Indiana University
> >
>
RE: [TESTING] Apache Airavata 0.8 RC2
Posted by Viknes Balasubramanee <vi...@msn.com>.
Hi,
I got the below error when building from the source in a Windows PC. The
integration-test failed.
[INFO] [talledLocalContainer]
DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby://localhos
t:1527/persist
ent_data;create=true;user=airavata;password=airavata,Username=airavata,Passw
ord=airavata,validationQuery=SELECT 1 from C
onfiguration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=tr
ue,testOnBorrow=true
[INFO] [talledLocalContainer] 48 airavata_data INFO [Thread-6]
openjpa.Runtime - Starting OpenJPA 2.2.0
[INFO] [talledLocalContainer] [ERROR] Error while initializing the Airavata
API
[INFO] [talledLocalContainer]
org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
Error while initi
alizing the Airavata API
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
:64)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
:43)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
:39)
[INFO] [talledLocalContainer] at
org.apache.airavata.wsmg.msgbox.MsgBoxServiceLifeCycle$1.run(MsgBoxServiceLi
feCycle.j
ava:117)
[INFO] [talledLocalContainer] Caused by:
org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
Error
while initializing the Airavata API
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
:61)
[INFO] [talledLocalContainer] ... 3 more
[INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
fatal general error> org.apache.openjpa.persiste
nce.PersistenceException: Cannot create PoolableConnectionFactory (Schema
'AIRAVATA' does not exist)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
Factory.j
ava:102)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
DBCConfig
urationImpl.java:603)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
itory.jav
a:1510)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
java:518)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
java:443)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
[INFO] [talledLocalContainer] at
org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
ryValue.j
ava:68)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
[INFO] [talledLocalContainer] at
org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
ce(OpenJP
AConfigurationImpl.java:968)
[INFO] [talledLocalContainer] at
org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
ce(OpenJP
AConfigurationImpl.java:959)
[INFO] [talledLocalContainer] at
org.apache.openjpa.kernel.AbstractBrokerFactory.makeReadOnly(AbstractBrokerF
actory.ja
va:638)
[INFO] [talledLocalContainer] at
org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
ory.java:
203)
[INFO] [talledLocalContainer] at
org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
Factory.j
ava:156)
[INFO] [talledLocalContainer] at
org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
EntityMan
agerFactoryImpl.java:227)
[INFO] [talledLocalContainer] at
org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
EntityMan
agerFactoryImpl.java:154)
[INFO] [talledLocalContainer] at
org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
EntityMan
agerFactoryImpl.java:60)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
ResourceU
tils.java:68)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
(Resource
Utils.java:201)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
ResourceU
tils.java:223)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
figuratio
n(AiravataJPARegistry.java:226)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
lize(Aira
vataJPARegistry.java:159)
[INFO] [talledLocalContainer] at
org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
aRegistry
Factory.java:81)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
6)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
12)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
)
[INFO] [talledLocalContainer] ... 4 more
[INFO] [talledLocalContainer] Caused by:
org.apache.commons.dbcp.SQLNestedException: Cannot create
PoolableConnectionFac
tory (Schema 'AIRAVATA' does not exist)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
cDataSour
ce.java:1549)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
a:1388)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
044)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
aSource.j
ava:110)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
aSource.j
ava:87)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
Factory.j
ava:91)
[INFO] [talledLocalContainer] ... 28 more
[INFO] [talledLocalContainer] Caused by: java.sql.SQLSyntaxErrorException:
Schema 'AIRAVATA' does not exist
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
.java:208
)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
eConnecti
onFactory.java:658)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
ource.jav
a:1558)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
cDataSour
ce.java:1545)
[INFO] [talledLocalContainer] ... 33 more
[INFO] [talledLocalContainer] Caused by:
org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not exist
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
own Sourc
e)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
[INFO] [talledLocalContainer] ... 38 more
[INFO] [talledLocalContainer] [ERROR] Error while initializing the Airavata
API
[INFO] [talledLocalContainer]
org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
Error while initi
alizing the Airavata API
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
:64)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
:43)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
:39)
[INFO] [talledLocalContainer] at
org.apache.airavata.wsmg.broker.BrokerServiceLifeCycle$1.run(BrokerServiceLi
feCycle.j
ava:156)
[INFO] [talledLocalContainer] Caused by:
org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
Error
while initializing the Airavata API
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:163
)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFactory.java
:61)
[INFO] [talledLocalContainer] ... 3 more
[INFO] [talledLocalContainer] Caused by: <openjpa-2.2.0-r422266:1244990
fatal general error> org.apache.openjpa.persiste
nce.PersistenceException: Cannot create PoolableConnectionFactory (Schema
'AIRAVATA' does not exist)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
Factory.j
ava:102)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionaryInstance(J
DBCConfig
urationImpl.java:603)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(MappingRepos
itory.jav
a:1510)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
java:518)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
java:443)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.java:104)
[INFO] [talledLocalContainer] at
org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDataReposito
ryValue.j
ava:68)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.java:83)
[INFO] [talledLocalContainer] at
org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataRepositoryInstan
ce(OpenJP
AConfigurationImpl.java:968)
[INFO] [talledLocalContainer] at
org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataRepositoryInstan
ce(OpenJP
AConfigurationImpl.java:959)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getMappingRepositoryInsta
nce(JDBCC
onfigurationImpl.java:711)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
kerFactor
y.java:140)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBro
kerFactor
y.java:164)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.newBrokerImpl(JDBCBrokerFac
tory.java
:122)
[INFO] [talledLocalContainer] at
org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFact
ory.java:
209)
[INFO] [talledLocalContainer] at
org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBroker
Factory.j
ava:156)
[INFO] [talledLocalContainer] at
org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
EntityMan
agerFactoryImpl.java:227)
[INFO] [talledLocalContainer] at
org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
EntityMan
agerFactoryImpl.java:154)
[INFO] [talledLocalContainer] at
org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(
EntityMan
agerFactoryImpl.java:60)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEntityManager(
ResourceU
tils.java:68)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfigurations
(Resource
Utils.java:201)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConfiguration(
ResourceU
tils.java:223)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.getCon
figuratio
n(AiravataJPARegistry.java:226)
[INFO] [talledLocalContainer] at
org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry.initia
lize(Aira
vataJPARegistry.java:159)
[INFO] [talledLocalContainer] at
org.apache.airavata.registry.api.AiravataRegistryFactory.getRegistry(Airavat
aRegistry
Factory.java:81)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.java:21
6)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataClient.createConfig(AiravataClient.java:1
12)
[INFO] [talledLocalContainer] at
org.apache.airavata.client.AiravataClient.initialize(AiravataClient.java:144
)
[INFO] [talledLocalContainer] ... 4 more
[INFO] [talledLocalContainer] Caused by:
org.apache.commons.dbcp.SQLNestedException: Cannot create
PoolableConnectionFac
tory (Schema 'AIRAVATA' does not exist)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
cDataSour
ce.java:1549)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.jav
a:1388)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1
044)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(DelegatingDat
aSource.j
ava:110)
[INFO] [talledLocalContainer] at
org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(DecoratingDat
aSource.j
ava:87)
[INFO] [talledLocalContainer] at
org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DBDictionary
Factory.j
ava:91)
[INFO] [talledLocalContainer] ... 31 more
[INFO] [talledLocalContainer] Caused by: java.sql.SQLSyntaxErrorException:
Schema 'AIRAVATA' does not exist
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.executeQuery(Unknown Source)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.DelegatingStatement.executeQuery(DelegatingStatement
.java:208
)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.PoolableConnectionFactory.validateConnection(Poolabl
eConnecti
onFactory.java:658)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataS
ource.jav
a:1558)
[INFO] [talledLocalContainer] at
org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(Basi
cDataSour
ce.java:1545)
[INFO] [talledLocalContainer] ... 36 more
[INFO] [talledLocalContainer] Caused by:
org.apache.derby.client.am.SqlException: Schema 'AIRAVATA' does not exist
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unkn
own Sourc
e)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
[INFO] [talledLocalContainer] at
org.apache.derby.client.am.Statement.executeQueryX(Unknown Source)
[INFO] [talledLocalContainer] ... 41 more
- Viknes
-----Original Message-----
From: Saminda Wijeratne [mailto:samindaw@gmail.com]
Sent: Tuesday, June 18, 2013 12:43 PM
To: dev@airavata.apache.org
Subject: Re: [TESTING] Apache Airavata 0.8 RC2
Tested the following using the standard airavata server distribution and a
deployment of airavata webapps in a tomcat 7.0.26 distribution,
5 & 10 minute tutorial
API client samples works
Airavata Client libraries verified for using API
Successfully built source pack with integration tests but *without*unit
tests.
When the source packs were built with tests at airavata-jpa-registry build
it waits with the following...
Tue Jun 18 12:28:15 EDT 2013 : Apache Derby Network Server - 10.9.1.0 -
(1344872) started and ready to accept connections on port 20000 Running a
query to test the database tables existence.
Tue Jun 18 12:29:15 EDT 2013 : Could not listen on port 20000 on host
127.0.0.1:
java.net.BindException: Address already in use Running a query to test the
database tables existence.
Tue Jun 18 12:30:16 EDT 2013 : Could not listen on port 20000 on host
127.0.0.1:
java.net.BindException: Address already in use Running a query to test the
database tables existence.
Tue Jun 18 12:31:16 EDT 2013 : Could not listen on port 20000 on host
127.0.0.1:
java.net.BindException: Address already in use Running a query to test the
database tables existence.
It is also worth mentioning that when deployed in tomcat I was not able to
run the 10 min tutorial without having considerable amount of free memory in
the machine.
[ERROR] Error while executing provider
org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
org.apache.airavata.gfac.GFacException: Error while executing provider
org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
at org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:94)
at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:71)
at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53)
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInv
oker.java:349)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(
WorkflowInterpreter.java:710)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically
(WorkflowInterpreter.java:530)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(Workflo
wInterpreter.java:89)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInte
rpreter.java:197)
Caused by: org.apache.airavata.gfac.provider.GFacProviderException: Cannot
run program "/bin/echo" (in directory
"/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
c427"):
java.io.IOException: error=12, Cannot allocate memory
at
org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
ava:121)
at org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:92)
... 7 more
Caused by: java.io.IOException: Cannot run program "/bin/echo" (in directory
"/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920f
c427"):
java.io.IOException: error=12, Cannot allocate memory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:460)
at
org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.j
ava:84)
... 8 more
Caused by: java.io.IOException: java.io.IOException: error=12, Cannot
allocate memory
at java.lang.UNIXProcess.<init>(UNIXProcess.java:148)
at java.lang.ProcessImpl.start(ProcessImpl.java:65)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:453)
... 9 more
Saminda
On Tue, Jun 18, 2013 at 11:47 AM, Lahiru Gunathilake
<gl...@gmail.com>wrote:
> Done !
>
>
> On Tue, Jun 18, 2013 at 11:30 AM, Saminda Wijeratne
> <samindaw@gmail.com
> >wrote:
>
> > Hi Lahiru,
> >
> > Can you include the source packs as well please.
> >
> >
> >
> > On Tue, Jun 18, 2013 at 11:23 AM, Chathuri Wimalasena
> > <ka...@gmail.com>wrote:
> >
> > > I tested the following scenarios.
> > >
> > > - 5 mins and 10 mins samples with default derby database and
> > > then
> with
> > > mysql database
> > > - Basic functionalities of XBaya (creating applications,
> > > creating
> > hosts,
> > > deleting, registry browser view, importing and exporting from
> > registry)
> > > - Ran two client samples with mysql (create application and
> > > workflow
> > run
> > > samples)
> > >
> > > I did not encounter any issues while doing any of the tests. I
> > > would
> like
> > > to suggest a small improvement to workflow run sample. In that
> > > echo
> > sample
> > > we give the input as "ODI Test" but the output we receive is just
> "ODI".
> > I
> > > think we can use a better input value (which does not have a space
> > > in between).
> > >
> > > Regards,
> > > Chathuri
> > >
> > >
> > > On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake
> > > <glahiru@gmail.com
> > > >wrote:
> > >
> > > > Hi Devs,
> > > >
> > > > Please find the RC2 packs here[1]. If you find any blockers
> > > > please
> > raise
> > > a
> > > > jira and respond to this email.
> > > >
> > > > [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
> > > > Regards
> > > >
> > > > --
> > > > System Analyst Programmer
> > > > PTI Lab
> > > > Indiana University
> > > >
> > >
> >
>
>
>
> --
> System Analyst Programmer
> PTI Lab
> Indiana University
>
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Saminda Wijeratne <sa...@gmail.com>.
Tested the following using the standard airavata server distribution and a
deployment of airavata webapps in a tomcat 7.0.26 distribution,
5 & 10 minute tutorial
API client samples works
Airavata Client libraries verified for using API
Successfully built source pack with integration tests but
*without*unit tests.
When the source packs were built with tests at airavata-jpa-registry build
it waits with the following...
Tue Jun 18 12:28:15 EDT 2013 : Apache Derby Network Server - 10.9.1.0 -
(1344872) started and ready to accept connections on port 20000
Running a query to test the database tables existence.
Tue Jun 18 12:29:15 EDT 2013 : Could not listen on port 20000 on host
127.0.0.1:
java.net.BindException: Address already in use
Running a query to test the database tables existence.
Tue Jun 18 12:30:16 EDT 2013 : Could not listen on port 20000 on host
127.0.0.1:
java.net.BindException: Address already in use
Running a query to test the database tables existence.
Tue Jun 18 12:31:16 EDT 2013 : Could not listen on port 20000 on host
127.0.0.1:
java.net.BindException: Address already in use
Running a query to test the database tables existence.
It is also worth mentioning that when deployed in tomcat I was not able to
run the 10 min tutorial without having considerable amount of free memory
in the machine.
[ERROR] Error while executing provider
org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
org.apache.airavata.gfac.GFacException: Error while executing provider
org.apache.airavata.gfac.provider.impl.LocalProvider functionality.
at org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:94)
at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:71)
at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53)
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:349)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:710)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:530)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(WorkflowInterpreter.java:89)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInterpreter.java:197)
Caused by: org.apache.airavata.gfac.provider.GFacProviderException: Cannot
run program "/bin/echo" (in directory
"/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920fc427"):
java.io.IOException: error=12, Cannot allocate memory
at
org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.java:121)
at org.apache.airavata.gfac.GFacAPI.executeProvider(GFacAPI.java:92)
... 7 more
Caused by: java.io.IOException: Cannot run program "/bin/echo" (in
directory
"/tmp/echo_app_Tue_Jun_18_11_57_29_EDT_2013_c0b9bfcc-0936-48b3-9b38-b730920fc427"):
java.io.IOException: error=12, Cannot allocate memory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:460)
at
org.apache.airavata.gfac.provider.impl.LocalProvider.execute(LocalProvider.java:84)
... 8 more
Caused by: java.io.IOException: java.io.IOException: error=12, Cannot
allocate memory
at java.lang.UNIXProcess.<init>(UNIXProcess.java:148)
at java.lang.ProcessImpl.start(ProcessImpl.java:65)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:453)
... 9 more
Saminda
On Tue, Jun 18, 2013 at 11:47 AM, Lahiru Gunathilake <gl...@gmail.com>wrote:
> Done !
>
>
> On Tue, Jun 18, 2013 at 11:30 AM, Saminda Wijeratne <samindaw@gmail.com
> >wrote:
>
> > Hi Lahiru,
> >
> > Can you include the source packs as well please.
> >
> >
> >
> > On Tue, Jun 18, 2013 at 11:23 AM, Chathuri Wimalasena
> > <ka...@gmail.com>wrote:
> >
> > > I tested the following scenarios.
> > >
> > > - 5 mins and 10 mins samples with default derby database and then
> with
> > > mysql database
> > > - Basic functionalities of XBaya (creating applications, creating
> > hosts,
> > > deleting, registry browser view, importing and exporting from
> > registry)
> > > - Ran two client samples with mysql (create application and workflow
> > run
> > > samples)
> > >
> > > I did not encounter any issues while doing any of the tests. I would
> like
> > > to suggest a small improvement to workflow run sample. In that echo
> > sample
> > > we give the input as "ODI Test" but the output we receive is just
> "ODI".
> > I
> > > think we can use a better input value (which does not have a space in
> > > between).
> > >
> > > Regards,
> > > Chathuri
> > >
> > >
> > > On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake <glahiru@gmail.com
> > > >wrote:
> > >
> > > > Hi Devs,
> > > >
> > > > Please find the RC2 packs here[1]. If you find any blockers please
> > raise
> > > a
> > > > jira and respond to this email.
> > > >
> > > > [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
> > > > Regards
> > > >
> > > > --
> > > > System Analyst Programmer
> > > > PTI Lab
> > > > Indiana University
> > > >
> > >
> >
>
>
>
> --
> System Analyst Programmer
> PTI Lab
> Indiana University
>
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Lahiru Gunathilake <gl...@gmail.com>.
Done !
On Tue, Jun 18, 2013 at 11:30 AM, Saminda Wijeratne <sa...@gmail.com>wrote:
> Hi Lahiru,
>
> Can you include the source packs as well please.
>
>
>
> On Tue, Jun 18, 2013 at 11:23 AM, Chathuri Wimalasena
> <ka...@gmail.com>wrote:
>
> > I tested the following scenarios.
> >
> > - 5 mins and 10 mins samples with default derby database and then with
> > mysql database
> > - Basic functionalities of XBaya (creating applications, creating
> hosts,
> > deleting, registry browser view, importing and exporting from
> registry)
> > - Ran two client samples with mysql (create application and workflow
> run
> > samples)
> >
> > I did not encounter any issues while doing any of the tests. I would like
> > to suggest a small improvement to workflow run sample. In that echo
> sample
> > we give the input as "ODI Test" but the output we receive is just "ODI".
> I
> > think we can use a better input value (which does not have a space in
> > between).
> >
> > Regards,
> > Chathuri
> >
> >
> > On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake <glahiru@gmail.com
> > >wrote:
> >
> > > Hi Devs,
> > >
> > > Please find the RC2 packs here[1]. If you find any blockers please
> raise
> > a
> > > jira and respond to this email.
> > >
> > > [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
> > > Regards
> > >
> > > --
> > > System Analyst Programmer
> > > PTI Lab
> > > Indiana University
> > >
> >
>
--
System Analyst Programmer
PTI Lab
Indiana University
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Saminda Wijeratne <sa...@gmail.com>.
Hi Lahiru,
Can you include the source packs as well please.
On Tue, Jun 18, 2013 at 11:23 AM, Chathuri Wimalasena
<ka...@gmail.com>wrote:
> I tested the following scenarios.
>
> - 5 mins and 10 mins samples with default derby database and then with
> mysql database
> - Basic functionalities of XBaya (creating applications, creating hosts,
> deleting, registry browser view, importing and exporting from registry)
> - Ran two client samples with mysql (create application and workflow run
> samples)
>
> I did not encounter any issues while doing any of the tests. I would like
> to suggest a small improvement to workflow run sample. In that echo sample
> we give the input as "ODI Test" but the output we receive is just "ODI". I
> think we can use a better input value (which does not have a space in
> between).
>
> Regards,
> Chathuri
>
>
> On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake <glahiru@gmail.com
> >wrote:
>
> > Hi Devs,
> >
> > Please find the RC2 packs here[1]. If you find any blockers please raise
> a
> > jira and respond to this email.
> >
> > [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
> > Regards
> >
> > --
> > System Analyst Programmer
> > PTI Lab
> > Indiana University
> >
>
Re: [TESTING] Apache Airavata 0.8 RC2
Posted by Chathuri Wimalasena <ka...@gmail.com>.
I tested the following scenarios.
- 5 mins and 10 mins samples with default derby database and then with
mysql database
- Basic functionalities of XBaya (creating applications, creating hosts,
deleting, registry browser view, importing and exporting from registry)
- Ran two client samples with mysql (create application and workflow run
samples)
I did not encounter any issues while doing any of the tests. I would like
to suggest a small improvement to workflow run sample. In that echo sample
we give the input as "ODI Test" but the output we receive is just "ODI". I
think we can use a better input value (which does not have a space in
between).
Regards,
Chathuri
On Mon, Jun 17, 2013 at 3:05 PM, Lahiru Gunathilake <gl...@gmail.com>wrote:
> Hi Devs,
>
> Please find the RC2 packs here[1]. If you find any blockers please raise a
> jira and respond to this email.
>
> [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
> Regards
>
> --
> System Analyst Programmer
> PTI Lab
> Indiana University
>
Re: GSOC help Fwd: [TESTING] Apache Airavata 0.8 RC2
Posted by Saminda Wijeratne <sa...@gmail.com>.
Some tips for you on what to test in the release[1]:
* Download the binary versions and
- run the 5 minute or 10 minute tutorial as described in README and
website.
- run use-cases for Airavata API mentioned in the Airavata wiki
- deploy & run Airavata Server web applications in tomcat
- deploy & run XBaya JNLP distribution in a web server
- If you have your own code or test cases you are welcome to test the
release against it and report any issues.
* Download the source files from compressed files and build (which includes
tests).
If you find any issues testing please feel free to drop a email to the
dev-list and if seems suitable create a jira[2] to track the issue (you are
also welcome to provide patches to them).
Saminda
1. https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2/
2. https://issues.apache.org/jira/browse/AIRAVATA
On Tue, Jun 18, 2013 at 11:50 AM, Marlon Pierce <ma...@iu.edu> wrote:
> -----BEGIN PGP SIGNED MESSAGE-----
> Hash: SHA1
>
> Hey GSOC students, we need your testing help too.
>
>
> Marlon
>
>
>
> - -------- Original Message --------
> Subject: [TESTING] Apache Airavata 0.8 RC2
> Date: Mon, 17 Jun 2013 15:05:09 -0400
> From: Lahiru Gunathilake <gl...@gmail.com>
> Reply-To: dev@airavata.apache.org
> To: dev <de...@airavata.apache.org>
>
> Hi Devs,
>
> Please find the RC2 packs here[1]. If you find any blockers please raise a
> jira and respond to this email.
>
> [1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
> Regards
>
> - --
> System Analyst Programmer
> PTI Lab
> Indiana University
>
>
>
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GSOC help Fwd: [TESTING] Apache Airavata 0.8 RC2
Posted by Marlon Pierce <ma...@iu.edu>.
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Hey GSOC students, we need your testing help too.
Marlon
- -------- Original Message --------
Subject: [TESTING] Apache Airavata 0.8 RC2
Date: Mon, 17 Jun 2013 15:05:09 -0400
From: Lahiru Gunathilake <gl...@gmail.com>
Reply-To: dev@airavata.apache.org
To: dev <de...@airavata.apache.org>
Hi Devs,
Please find the RC2 packs here[1]. If you find any blockers please raise a
jira and respond to this email.
[1]https://dist.apache.org/repos/dist/dev/airavata/0.8/RC2
Regards
- --
System Analyst Programmer
PTI Lab
Indiana University
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