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Posted to notifications@ctakes.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2017/10/17 22:31:44 UTC
Build failed in Jenkins: ctakes-trunk-Java-1.9 #9
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/9/display/redirect?page=changes>
Changes:
[tmill] Added some debugging statements for cross-document coref.
------------------------------------------
[...truncated 1.03 MB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.687 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.762 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.573 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.234 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.535 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 23.850 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.666 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 2.978 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 5.563 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.200 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.776 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.837 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 25.962 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.688 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 4.824 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 40.897 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 16.138 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.646 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 4.962 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.805 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.672 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.058 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.117 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.563 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 4.567 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.406 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 3.889 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.225 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 32.549 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.909 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.435 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 6.637 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 10.453 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:35 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 9.715 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.609 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.060 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.624 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.371 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.651 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 6.610 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.638 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.669 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.506 s]
[INFO] ctakes-examples .................................... SUCCESS [ 8.642 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.490 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.844 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:01 min
[INFO] Finished at: 2017-10-17T22:31:34Z
[INFO] Final Memory: 73M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 39947](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #32
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/32/display/redirect?page=changes>
Changes:
[tmill] Fix to patient-aware coreference with new API. Compiles and evaluates correctly.
------------------------------------------
[...truncated 324.93 KB...]
A ctakes-lvg/src/main/java/org
A ctakes-lvg/src/main/java/org/apache
A ctakes-lvg/src/main/java/org/apache/ctakes
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/LvgBaseTokenAnnotator.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/LvgSingleton.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/LvgAnnotator.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/ThreadSafeLvg.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/resource
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/resource/LvgCmdApiResourceImpl.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/resource/LvgCmdApiResource.java
A ctakes-lvg/pom.xml
A ctakes-lvg/resources
A ctakes-lvg/resources/launch
AU ctakes-lvg/resources/launch/UIMA_CVD--LVG.launch
A ctakes-lvg/README
A ctakes-lvg/desc
A ctakes-lvg/desc/analysis_engine
A ctakes-lvg/desc/analysis_engine/LvgAnnotator.xml
A ctakes-lvg/desc/analysis_engine/AggregateAE.xml
A ctakes-context-tokenizer
A ctakes-context-tokenizer/data
A ctakes-context-tokenizer/data/test
A ctakes-context-tokenizer/data/test/output
A ctakes-context-tokenizer/pom.xml
A ctakes-context-tokenizer/resources
A ctakes-context-tokenizer/resources/launch
A ctakes-context-tokenizer/README
A ctakes-context-tokenizer/desc
A ctakes-context-tokenizer/desc/analysis_engine
A ctakes-context-tokenizer/desc/analysis_engine/TestTAE.xml
A ctakes-context-tokenizer/desc/analysis_engine/AggregateAE.xml
A ctakes-context-tokenizer/desc/analysis_engine/ContextDependentTokenizerAnnotator.xml
A ctakes-context-tokenizer/LICENSE
A ctakes-context-tokenizer/src
A ctakes-context-tokenizer/src/test
A ctakes-context-tokenizer/src/test/java
A ctakes-context-tokenizer/src/test/java/org
A ctakes-context-tokenizer/src/test/java/org/apache
A ctakes-context-tokenizer/src/test/java/org/apache/ctakes
A ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer
A ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae
AU ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae/TestContextDependentTokenizerAnnotator.java
A ctakes-context-tokenizer/src/main
A ctakes-context-tokenizer/src/main/java
A ctakes-context-tokenizer/src/main/java/org
A ctakes-context-tokenizer/src/main/java/org/apache
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae/ContextDependentTokenizerAnnotator.java
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/context
A ctakes-ne-contexts-res
A ctakes-ne-contexts-res/pom.xml
A ctakes-ne-contexts-res/LICENSE
A ctakes-ne-contexts-res/src
A ctakes-ne-contexts-res/src/test
A ctakes-ne-contexts-res/src/main
A ctakes-ne-contexts-res/src/main/resources
A ctakes-ne-contexts-res/src/main/resources/org
A ctakes-ne-contexts-res/src/main/resources/org/apache
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline/NeContextsSubPipe.piper
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc/NegationAnnotator.xml
A ctakes-chunker
A ctakes-chunker/data
A ctakes-chunker/data/chunk
A ctakes-chunker/data/chunk/combinations
A ctakes-chunker/data/chunk/ptb
A ctakes-chunker/data/chunk/ptb/README
A ctakes-chunker/data/chunk/genia
A ctakes-chunker/data/chunk/genia/README
A ctakes-chunker/data/chunk/genia/genia.opennlp.chunks
A ctakes-chunker/data/treebank
A ctakes-chunker/data/treebank/genia
A ctakes-chunker/data/treebank/genia/names-00.txt
A ctakes-chunker/data/treebank/genia/00
A ctakes-chunker/data/treebank/genia/names-01.txt
A ctakes-chunker/data/treebank/genia/01
A ctakes-chunker/data/treebank/genia/README
A ctakes-chunker/pom.xml
A ctakes-chunker/resources
A ctakes-chunker/resources/launch
AU ctakes-chunker/resources/launch/ChunkAdjusterTests.launch
AU ctakes-chunker/resources/launch/chunker.launch
AU ctakes-chunker/resources/launch/UIMA_CPE_GUI--chunker.launch
A ctakes-chunker/README
A ctakes-chunker/ExampleTrainChunker.bat
A ctakes-chunker/desc
A ctakes-chunker/desc/AggregateAE.xml
A ctakes-chunker/desc/collection_processing_engine
A ctakes-chunker/desc/Chunker.xml
A ctakes-chunker/desc/test
A ctakes-chunker/desc/test/ChunkerAggregate.xml
A ctakes-chunker/desc/test/ChunkerCPE.xml
A ctakes-chunker/desc/test/POSTagger.xml
A ctakes-chunker/desc/test/PhraseTypeChunkerAggregate.xml
A ctakes-chunker/desc/test/Chunker.xml
A ctakes-chunker/desc/test/TokenizerAnnotator.xml
A ctakes-chunker/desc/test/ChunkAdjusterAggregate.xml
A ctakes-chunker/desc/test/ChunkerCpeUsingPosTagDictionary.xml
A ctakes-chunker/desc/test/SimpleSegmentAnnotator.xml
A ctakes-chunker/desc/test/AdjustNounPhraseToIncludeFollowingPPNP.xml
A ctakes-chunker/desc/SimpleSegmentAnnotator.xml
A ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingNP.xml
A ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingPPNP.xml
A ctakes-chunker/desc/AdjustOPhraseToIncludeFollowingO.xml
A ctakes-chunker/desc/ChunkerAggregate.xml
A ctakes-chunker/desc/ChunkerCPE.xml
A ctakes-chunker/desc/analysis_engine
A ctakes-chunker/desc/ChunkAdjuster.xml
A ctakes-chunker/desc/POSTagger.xml
A ctakes-chunker/LICENSE
A ctakes-chunker/scripts
A ctakes-chunker/scripts/java
A ctakes-chunker/scripts/java/data
A ctakes-chunker/scripts/java/data/chunk
A ctakes-chunker/scripts/java/data/chunk/genia
A ctakes-chunker/scripts/java/data/chunk/genia/Genia2PTB.java
A ctakes-chunker/scripts/java/data/chunk/Chunklink2OpenNLP.java
A ctakes-chunker/scripts/perl
A ctakes-chunker/scripts/perl/README
A ctakes-chunker/scripts/groovy
A ctakes-chunker/scripts/groovy/data
A ctakes-chunker/scripts/groovy/data/chunk
A ctakes-chunker/scripts/groovy/data/chunk/TagReport.groovy
A ctakes-chunker/src
A ctakes-chunker/src/test
A ctakes-chunker/src/test/resources
A ctakes-chunker/src/test/resources/data
A ctakes-chunker/src/test/resources/data/README
A ctakes-chunker/src/test/resources/data/output
A ctakes-chunker/src/test/resources/data/output/text1.txt.included.used.tag-dictionary.xml
A ctakes-chunker/src/test/resources/data/output/NotesIIST_RTF.DTD
A ctakes-chunker/src/test/resources/data/output/text1.txt.included.xml
A ctakes-chunker/src/test/resources/data/unit-test.opennlp.chunks
A ctakes-chunker/src/test/resources/data/text-files
A ctakes-chunker/src/test/resources/data/text-files/text1.txt
A ctakes-chunker/src/test/java
A ctakes-chunker/src/test/java/org
A ctakes-chunker/src/test/java/org/apache
A ctakes-chunker/src/test/java/org/apache/ctakes
A ctakes-chunker/src/test/java/org/apache/ctakes/chunker
A ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkAdjusterTests.java
A ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkerTests.java
A ctakes-chunker/src/main
A ctakes-chunker/src/main/java
A ctakes-chunker/src/main/java/org
A ctakes-chunker/src/main/java/org/apache
A ctakes-chunker/src/main/java/org/apache/ctakes
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster/ChunkAdjuster.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/ChunkCreator.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/DefaultChunkCreator.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/PhraseTypeChunkCreator.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/Chunker.java
A ctakes-dependency-parser-res
A ctakes-dependency-parser-res/LICENSE
A ctakes-dependency-parser-res/src
A ctakes-dependency-parser-res/src/test
A ctakes-dependency-parser-res/src/main
A ctakes-dependency-parser-res/src/main/resources
A ctakes-dependency-parser-res/src/main/resources/org
A ctakes-dependency-parser-res/src/main/resources/org/apache
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred/mayo-en-pred-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/README
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/mayo-en-dep-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/mayo-en-srl-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/README
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/clearparser_models.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role/mayo-en-role-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/README
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/dictionary-1.3.1.jar
A ctakes-dependency-parser-res/pom.xml
AU KEYS
U .
At revision 1815625
Parsing POMs
Established TCP socket on 44993
maven35-agent.jar already up to date
maven35-interceptor.jar already up to date
maven3-interceptor-commons.jar already up to date
[ctakes-trunk-Java-1.9] $ /home/jenkins/tools/java/latest1.9/bin/java -Xmx4g -Xms256m -Dmaven.test.failure.ignore=false -cp /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging jenkins.maven3.agent.Maven35Main /home/jenkins/tools/maven/apache-maven-3.5.0 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven35-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 44993
ERROR: Failed to parse POMs
java.io.IOException: Cannot run program "/home/jenkins/tools/java/latest1.9/bin/java" (in directory "<https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/")>: error=2, No such file or directory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
at ......remote call to ubuntu-eu3(Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.Launcher$RemoteLauncher.launch(Launcher.java:1053)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:278)
at hudson.maven.ProcessCache.get(ProcessCache.java:236)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:804)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.io.IOException: error=2, No such file or directory
at java.lang.UNIXProcess.forkAndExec(Native Method)
at java.lang.UNIXProcess.<init>(UNIXProcess.java:247)
at java.lang.ProcessImpl.start(ProcessImpl.java:134)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
Build failed in Jenkins: ctakes-trunk-Java-1.9 #31
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/31/display/redirect?page=changes>
Changes:
[alexz] CTAKES-458: Upgrade apache parent pom, fix apache-rat
------------------------------------------
[...truncated 978.46 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 19.288 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 20.741 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 20.072 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 38.264 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 36.211 s]
[INFO] Apache cTAKES core ................................. SUCCESS [02:26 min]
[INFO] ctakes-gui ......................................... SUCCESS [ 55.137 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 40.462 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [01:00 min]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 38.936 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 55.160 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 36.771 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 55.171 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 51.052 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 35.670 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [01:29 min]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 36.717 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 34.808 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 41.829 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 38.120 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 34.425 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 41.275 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 17.625 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 18.149 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 36.806 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 37.609 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [01:02 min]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [01:25 min]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [01:52 min]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 43.103 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 15.421 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.867 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.627 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:09 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 24.167 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.993 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.175 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.912 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.397 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.797 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 8.229 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.812 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.462 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.848 s]
[INFO] ctakes-examples .................................... SUCCESS [ 24.064 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.929 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.202 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 37:02 min
[INFO] Finished at: 2017-11-17T18:48:38Z
[INFO] Final Memory: 75M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 41230](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #30
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/30/display/redirect?page=changes>
Changes:
[seanfinan] Boyscouting, replace explicit maven-exec version numbers
------------------------------------------
[...truncated 978.46 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 39.401 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [01:06 min]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.956 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 8.137 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.059 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 41.864 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 20.448 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 36.951 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 37.393 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 20.327 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 20.242 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 38.580 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 42.640 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 40.870 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 38.623 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [01:00 min]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 35.678 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 21.982 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 44.251 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 40.745 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 19.343 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 20.868 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 18.909 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 21.334 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 38.274 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 38.065 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 56.926 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [01:10 min]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [01:17 min]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 41.473 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 22.511 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 40.547 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [01:05 min]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:55 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [01:17 min]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 18.186 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 36.217 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 20.898 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 35.997 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 19.813 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 37.089 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 3.136 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 19.930 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.770 s]
[INFO] ctakes-examples .................................... SUCCESS [ 41.523 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 20.222 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.258 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 39:55 min
[INFO] Finished at: 2017-11-17T17:50:44Z
[INFO] Final Memory: 66M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 45670](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #29
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/29/display/redirect?page=changes>
Changes:
[seanfinan] Add piper gui profile
------------------------------------------
[...truncated 978.52 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [01:40 min]
[INFO] ctakes-gui-res ..................................... SUCCESS [01:49 min]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 52.532 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [01:46 min]
[INFO] Apache cTAKES utils ................................ SUCCESS [01:04 min]
[INFO] Apache cTAKES core ................................. SUCCESS [ 52.659 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 18.798 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 4.903 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 19.158 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 4.872 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 5.520 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 6.519 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 20.351 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 12.388 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 6.462 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 33.607 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 6.940 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 4.122 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 7.378 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 6.365 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 6.631 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 10.536 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 6.052 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 4.387 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 6.266 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 18.701 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 9.612 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 21.065 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 41.786 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 21.708 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 3.596 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 22.093 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 21.320 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:28 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 27.571 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 17.778 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 19.283 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 4.702 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 10.284 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 19.461 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 12.780 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 4.605 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 6.289 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 10.155 s]
[INFO] ctakes-examples .................................... SUCCESS [ 28.190 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 8.612 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.389 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 24:08 min
[INFO] Finished at: 2017-11-17T17:08:08Z
[INFO] Final Memory: 70M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 37001](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #28
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/28/display/redirect?page=changes>
Changes:
[seanfinan] Fix for typo (inattentiveness)
------------------------------------------
[...truncated 978.47 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.307 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 13.395 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 6.257 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 36.445 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 8.419 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 56.300 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 19.325 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 4.800 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 7.314 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 4.642 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 5.706 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 6.428 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 20.658 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 15.125 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 7.465 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 24.771 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 7.264 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 3.821 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 7.037 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 6.495 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 17.024 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 10.549 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 5.857 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 4.534 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 5.282 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 9.138 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 9.384 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 20.719 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 40.238 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 21.703 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 3.705 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 8.954 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 20.931 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:29 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 27.065 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 4.359 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 19.356 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 4.632 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 9.976 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 5.486 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 22.275 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 4.313 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 6.054 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 10.167 s]
[INFO] ctakes-examples .................................... SUCCESS [ 11.861 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 8.662 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.102 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 14:04 min
[INFO] Finished at: 2017-11-17T14:46:02Z
[INFO] Final Memory: 68M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 52475](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #27
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/27/display/redirect?page=changes>
Changes:
[alexz] CTAKES-480: fix pom.xml to remove exclusion for apache-profile
------------------------------------------
[...truncated 978.47 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 4.942 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.697 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 3.024 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 9.570 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.317 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 26.370 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 18.016 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.534 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.358 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.671 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.153 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.473 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 13.655 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.192 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.951 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 26.856 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 8.294 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 16.432 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.632 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 5.020 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.816 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 7.504 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.300 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.756 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.476 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.971 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.486 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 23.082 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 42.882 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.629 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 17.832 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 8.245 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.957 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:03 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.937 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.761 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.094 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.832 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.831 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.771 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.802 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.775 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.483 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.719 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.964 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.599 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.526 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 10:15 min
[INFO] Finished at: 2017-11-17T00:21:44Z
[INFO] Final Memory: 68M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 38498](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #26
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/26/display/redirect?page=changes>
Changes:
[alexz] CTAKES-479: add UmlsEnvironmentConfiguration.java
[alexz] CTAKES-479: skip testCPE when UMLS credentials not exported as env vars
------------------------------------------
[...truncated 978.46 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.539 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.796 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.866 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 8.859 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.313 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 24.620 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.144 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.440 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.159 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.464 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.288 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.396 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 12.231 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.205 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.952 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 23.575 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.445 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.624 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 17.670 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.963 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.817 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 7.608 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.265 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.763 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.625 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.844 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.471 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 21.804 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 40.289 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.251 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 21.857 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 32.260 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 48.637 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:29 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.374 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.943 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.051 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.928 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.220 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.758 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.801 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.837 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.594 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.629 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.946 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.647 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.434 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 11:13 min
[INFO] Finished at: 2017-11-16T23:21:02Z
[INFO] Final Memory: 66M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 45860](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #25
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/25/display/redirect?page=changes>
Changes:
[seanfinan] Followup checkin for patient view store
[seanfinan] Minor refactor (shorter names)
------------------------------------------
[...truncated 978.40 KB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.154 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.827 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.796 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.233 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.732 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 26.259 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.557 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.593 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.383 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.430 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.155 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.463 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 12.044 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.030 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.988 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 32.005 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 8.311 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.517 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.295 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 5.127 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.620 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.518 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.073 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.585 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.628 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.873 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.358 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 23.355 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 55.564 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.092 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.522 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.354 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.153 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:08 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 12.204 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 3.127 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.341 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 9.299 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 8.429 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.846 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 10.473 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 6.704 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 4.360 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.615 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.016 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.921 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.467 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 10:20 min
[INFO] Finished at: 2017-11-16T21:22:58Z
[INFO] Final Memory: 69M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 43131](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #24
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/24/display/redirect?page=changes>
Changes:
[seanfinan] Rewrite of Patient view cache
------------------------------------------
[...truncated 498.72 KB...]
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-ytex-res ---
[INFO]
[INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-ytex-res ---
[INFO]
[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-ytex-res ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 48 resources
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-ytex-res ---
[INFO] No sources to compile
[INFO]
[INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-ytex-res ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 0 resource
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-ytex-res ---
[INFO] No sources to compile
[INFO]
[INFO] --- maven-surefire-plugin:2.12.1:test (default-test) @ ctakes-ytex-res ---
[INFO] Surefire report directory: <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-ytex-res/target/surefire-reports>
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Results :
Tests run: 0, Failures: 0, Errors: 0, Skipped: 0
[JENKINS] Recording test results
[INFO]
[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-ytex-res ---
[INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-ytex-res/target/ctakes-ytex-res-4.0.1-SNAPSHOT.jar>
[INFO]
[INFO] --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-ytex-res ---
[INFO]
[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-ytex-res ---
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-ytex-res/target/ctakes-ytex-res-4.0.1-SNAPSHOT.jar> to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-ytex-res/4.0.1-SNAPSHOT/ctakes-ytex-res-4.0.1-SNAPSHOT.jar
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-ytex-res/pom.xml> to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-ytex-res/4.0.1-SNAPSHOT/ctakes-ytex-res-4.0.1-SNAPSHOT.pom
[JENKINS] Archiving disabled
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES YTEX
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES YTEX UIMA
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES YTEX Web
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES Distribution
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES Regression-test
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES template filler
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
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[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 7.259 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 13.511 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 6.118 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 36.900 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 8.927 s]
[INFO] Apache cTAKES core ................................. FAILURE [ 6.634 s]
[INFO] ctakes-gui ......................................... SKIPPED
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 4.852 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SKIPPED
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 4.731 s]
[INFO] Apache cTAKES chunker .............................. SKIPPED
[INFO] Apache cTAKES document preprocessor ................ SKIPPED
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 32.796 s]
[INFO] Apache cTAKES dictionary lookup .................... SKIPPED
[INFO] Apache cTAKES context dependent tokenizer .......... SKIPPED
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 28.148 s]
[INFO] Apache cTAKES LVG lexical tools .................... SKIPPED
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 3.831 s]
[INFO] Apache cTAKES named entity contexts ................ SKIPPED
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 6.249 s]
[INFO] Apache cTAKES Constituency Parser .................. SKIPPED
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 10.499 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 6.088 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 4.335 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 5.850 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SKIPPED
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 9.628 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 21.848 s]
[INFO] Apache cTAKES Dependency Parser .................... SKIPPED
[INFO] Apache cTAKES Assertion ............................ SKIPPED
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 3.669 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SKIPPED
[INFO] Apache cTAKES Relation Extractor ................... SKIPPED
[INFO] Apache cTAKES Temporal Information Extraction ...... SKIPPED
[INFO] Apache cTAKES CoReference Resolver ................. SKIPPED
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 4.120 s]
[INFO] Apache cTAKES Drug NER ............................. SKIPPED
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 4.352 s]
[INFO] Apache cTAKES Side Effects ......................... SKIPPED
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 5.465 s]
[INFO] Apache cTAKES Smoking Status ....................... SKIPPED
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 4.660 s]
[INFO] Apache cTAKES Assertion's zoner .................... SKIPPED
[INFO] ctakes-examples-res ................................ SUCCESS [ 10.126 s]
[INFO] ctakes-examples .................................... SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 8.447 s]
[INFO] Apache cTAKES YTEX ................................. SKIPPED
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 05:33 min
[INFO] Finished at: 2017-11-16T20:17:35Z
[INFO] Final Memory: 51M/256M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.4:compile (default-compile) on project ctakes-core: Compilation failure: Compilation failure:
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cr/FilesInDirectoryCollectionReader.java>:[113,26] [deprecation] locateFile(String) in FileLocator has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/patient/PatientNoteCollector.java>:[37,36] error: cannot find symbol
[ERROR] symbol: method addDocument(JCas)
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/PersonTitleFSM.java>:[121,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cr/FileTreeReader.java>:[126,39] error: cannot find symbol
[ERROR] symbol: method setDocCount(String,int)
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cr/FileTreeReader.java>:[130,78] error: cannot find symbol
[ERROR] symbol: method setDocCount(String,Integer)
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/DateFSM.java>:[272,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/util/ListIterable.java>:[34,50] [unchecked] unchecked cast
[ERROR] required: T
[ERROR] found: TOP
[ERROR] where T is a type-variable:
[ERROR] T extends Object declared in class FSListIterator
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/HtmlTableCasConsumer.java>:[93,41] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/HtmlTableCasConsumer.java>:[234,22] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/HtmlTableCasConsumer.java>:[337,27] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/HtmlTableCasConsumer.java>:[338,27] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/resource/StringIntegerMapResourceImpl.java>:[72,40] [deprecation] Integer(String) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/MeasurementFSM.java>:[247,17] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/MeasurementFSM.java>:[256,17] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/MeasurementFSM.java>:[284,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/sentence/SentenceDetectorCtakes.java>:[77,37] [deprecation] Double(double) in Double has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/sentence/SentenceDetectorCtakes.java>:[189,25] [deprecation] Double(double) in Double has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/ae/SentenceDetector.java>:[314,30] [deprecation] train(String,ObjectStream<SentenceSample>,boolean,Dictionary,TrainingParameters) in SentenceDetectorME has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/sentence/EndOfSentenceScannerImpl.java>:[66,19] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/TokenFreqCasConsumer.java>:[143,47] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/RangeFSM.java>:[147,17] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/RangeFSM.java>:[156,17] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/RangeFSM.java>:[184,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/FractionFSM.java>:[170,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cr/JdbcCollectionReader.java>:[177,25] [unchecked] unchecked conversion
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/NegationFSM.java>:[386,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/patient/AbstractPatientConsumer.java>:[66,77] error: cannot find symbol
[ERROR] symbol: method getPatientIds()
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/patient/AbstractPatientConsumer.java>:[87,55] error: cannot find symbol
[ERROR] symbol: method getPatientCas(String)
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/ci/HyphenTextModifierImpl.java>:[76,45] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/ci/HyphenTextModifierImpl.java>:[113,45] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/resource/JdbcConnectionResourceImpl.java>:[92,22] [deprecation] Boolean(String) in Boolean has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/TimeFSM.java>:[150,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/RomanNumeralFSM.java>:[106,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/StatusIndicatorFSM.java>:[228,41] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
[ERROR]
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR] mvn <goals> -rf :ctakes-core
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #23
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/23/display/redirect?page=changes>
Changes:
[seanfinan] MarkableHeadTreeCreator removed
------------------------------------------
[...truncated 978.28 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.104 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.030 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.890 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 9.706 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 20.731 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 28.305 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.178 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.741 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 10.501 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 5.052 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 10.251 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 10.005 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 21.494 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 10.082 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 15.235 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 47.719 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 12.692 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 11.735 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 17.380 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 15.558 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 10.657 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 14.967 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 9.713 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 9.947 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 4.394 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 4.176 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.930 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 23.729 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 43.090 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 8.114 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.592 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 8.031 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.637 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:53 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.772 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.833 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.570 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.837 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.900 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.839 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.570 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.916 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.665 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.673 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.186 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 4.310 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 6.432 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 12:35 min
[INFO] Finished at: 2017-11-15T13:25:22Z
[INFO] Final Memory: 68M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 36296](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #22
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/22/display/redirect?page=changes>
Changes:
[alexz] CTAKES-334: fix GramMatrixExporterImp::setBagOfWordsExporter signature
------------------------------------------
[...truncated 978.29 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.095 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.835 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.781 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 7.907 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.041 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 34.429 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.321 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.498 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 5.817 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.579 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.192 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.208 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 10.897 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.819 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.169 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 17.337 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.307 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.828 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.022 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.849 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.709 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.288 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.059 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.980 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.656 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.690 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.207 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.718 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 37.315 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.845 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.604 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.550 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 10.744 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:35 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 18.593 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.837 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.901 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.741 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.889 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.921 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.183 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.849 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.215 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.639 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.481 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.666 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.289 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 08:48 min
[INFO] Finished at: 2017-11-15T01:57:38Z
[INFO] Final Memory: 75M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 36188](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #21
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/21/display/redirect?page=changes>
Changes:
[seanfinan] CTAKES-441 : Add LabValueFinder annotator. Many thanks to the original author Kean Kaufmann.
[seanfinan] TextSpan refactor (package move). Prep for LabValueFinder
[alexz] "svn ignore IntelliJ IDEA project files - *.iml, .idea"
------------------------------------------
[...truncated 978.34 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.474 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.431 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.875 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.106 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.815 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 25.788 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.259 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.383 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 5.973 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.444 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.980 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.178 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 11.524 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.879 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.054 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 19.140 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.418 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.662 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.828 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.809 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.668 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.216 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.204 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.842 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.557 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.748 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.113 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.500 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 37.097 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.840 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.654 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.539 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 11.061 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:36 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 10.642 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.896 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.698 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.774 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.760 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.802 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.007 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 3.014 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.330 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.637 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.462 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.699 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.057 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 08:39 min
[INFO] Finished at: 2017-11-15T00:21:23Z
[INFO] Final Memory: 66M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 47046](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #20
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/20/display/redirect?page=changes>
Changes:
[seanfinan] Fix for possible bug involving too many open files. Apparently Files.lines() doesn't auto-close at eos.
------------------------------------------
[...truncated 1.21 MB...]
[INFO] ctakes-examples-res ................................ SUCCESS [ 3.056 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.523 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.801 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.594 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 10:17 min
[INFO] Finished at: 2017-11-13T18:29:48Z
[INFO] Final Memory: 73M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org timothy.miller@childrens.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org timothy.miller@childrens.harvard.edu sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org timothy.miller@childrens.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 35492](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #19
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/19/display/redirect?page=changes>
Changes:
[tmill] WIP: Fixes compiler error but coref eval still not working.
------------------------------------------
[...truncated 320.84 KB...]
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/knowtator/ArgumentInfo.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/knowtator/Span.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorConsumer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorTrain.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/TreeFeatureConsumer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorPipelineSingleCas.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationAnnotationViewer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/SelectiveRelationAnnotationViewer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorPipeline.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/Splitter.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/GoldAnnotationStatsCalculator.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/GoldAnnotationAnalysisPipeline.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/Constants.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/CategoricalDistribution.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/Stats.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/analysis
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/analysis/Utils.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/analysis/EventAndEntityViewer.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/analysis/GoldRelationViewer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/metastasis
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/metastasis/MetastasisAnaforaXMLReader.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/metastasis/AnatomicalSiteListExtractorPipeline.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/metastasis/MetastasisXmiGenerationPipeline.java
A ctakes-relation-extractor/docs
A ctakes-relation-extractor/docs/todo.txt
A ctakes-relation-extractor/docs/knowtator.txt
A ctakes-relation-extractor/docs/readme.txt
A ctakes-relation-extractor/pom.xml
A ctakes-relation-extractor/resources
A ctakes-relation-extractor/resources/launch
AU ctakes-relation-extractor/resources/launch/UIMA_CPE--relation-extractor.launch
AU ctakes-relation-extractor/resources/launch/UIMA_CVD--relation-extractor.launch
A ctakes-relation-extractor/desc
A ctakes-relation-extractor/desc/analysis_engine
A ctakes-relation-extractor/desc/analysis_engine/LocationOfRelationExtractorAnnotator.xml
A ctakes-relation-extractor/desc/analysis_engine/DegreeOfRelationExtractorAnnotator.xml
A ctakes-relation-extractor/desc/analysis_engine/ModifierExtractorAnnotator.xml
AU ctakes-relation-extractor/desc/analysis_engine/RelationExtractorAggregate.xml
AU ctakes-relation-extractor/desc/analysis_engine/RelationExtractorPreprocessor.xml
A ctakes-relation-extractor/desc/analysis_engine/RemoteDictionary.xml
A ctakes-relation-extractor/metadata
A ctakes-relation-extractor/metadata/install.xml
A ctakes-preprocessor
A ctakes-preprocessor/LICENSE
A ctakes-preprocessor/src
A ctakes-preprocessor/src/test
A ctakes-preprocessor/src/test/data
A ctakes-preprocessor/src/test/data/output
A ctakes-preprocessor/src/test/data/output/testpatient_cn_1.xml.included.xml
A ctakes-preprocessor/src/test/resources
A ctakes-preprocessor/src/test/resources/testpatient_cn_1.xml
A ctakes-preprocessor/src/test/resources/NotesIIST_RTF.DTD
A ctakes-preprocessor/src/test/java
A ctakes-preprocessor/src/test/java/org
A ctakes-preprocessor/src/test/java/org/apache
A ctakes-preprocessor/src/test/java/org/apache/ctakes
A ctakes-preprocessor/src/test/java/org/apache/ctakes/preprocessor
A ctakes-preprocessor/src/test/java/org/apache/ctakes/preprocessor/ClinicalNotePreProcessorTest.java
A ctakes-preprocessor/src/main
A ctakes-preprocessor/src/main/resources
A ctakes-preprocessor/src/main/resources/org
A ctakes-preprocessor/src/main/resources/org/apache
A ctakes-preprocessor/src/main/resources/org/apache/ctakes
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/cda
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/cda/NotesIIST_RTF.DTD
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/tokenizer
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/tokenizer/hyphenated.txt
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/tokenizer/hyphenated_sample.txt
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/tokenizer/hyphenated.README.mayo
A ctakes-preprocessor/src/main/java
A ctakes-preprocessor/src/main/java/org
A ctakes-preprocessor/src/main/java/org/apache
A ctakes-preprocessor/src/main/java/org/apache/ctakes
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/DocumentMetaData.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/test
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/test/TestDriver.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/DTDloader.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/SegmentMetaData.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/Utility.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/ae
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/ae/CdaCasInitializer.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/PreProcessor.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/Annotation.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/IntegerRange.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/ClinicalNotePreProcessor.java
A ctakes-preprocessor/src/main/java/edu
A ctakes-preprocessor/src/main/java/edu/mayo
A ctakes-preprocessor/src/main/java/edu/mayo/bmi
A ctakes-preprocessor/src/main/java/edu/mayo/bmi/uima
A ctakes-preprocessor/pom.xml
A ctakes-preprocessor/resources
A ctakes-preprocessor/resources/launch
AU ctakes-preprocessor/resources/launch/document_preprocessor.launch
AU ctakes-preprocessor/resources/launch/UIMA_CPE_GUI--document_preprocessor.launch
A ctakes-preprocessor/README
A ctakes-preprocessor/desc
A ctakes-preprocessor/desc/CPE_CdaCasInitializer.xml
A ctakes-preprocessor/desc/AggregateAE.xml
A ctakes-preprocessor/desc/CdaCasInitializer.xml
A ctakes-smoking-status
A ctakes-smoking-status/metadata
AU ctakes-smoking-status/metadata/PEAR.properties
AU ctakes-smoking-status/metadata/setenv.txt
AU ctakes-smoking-status/metadata/install.xml
AU ctakes-smoking-status/LICENSE
A ctakes-smoking-status/src
A ctakes-smoking-status/src/main
A ctakes-smoking-status/src/main/java
A ctakes-smoking-status/src/main/java/org
A ctakes-smoking-status/src/main/java/org/apache
A ctakes-smoking-status/src/main/java/org/apache/ctakes
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/patientLevel
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/patientLevel/PatientLevelSmokingStatus.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/util
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/util/ClassifiableEntry.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/util/TruthValue.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/i2b2
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/context
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/context/negation
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/context/negation/NegationContextAnalyzer.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/context/NamedEntityContextAnalyzer.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/machine
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/machine/NegationFSM.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/SentenceAdjuster.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/ResolutionAnnotator.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/ClassifiableEntries.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/PcsClassifierAnnotator_libsvm.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/KuRuleBasedClassifierAnnotator.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/cc
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/cc/RecordResolutionCasConsumer.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/Const.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/MLutil
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/MLutil/GenerateTrainingData.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup/ae
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup/ae/NonSmokerNamedEntityLookupConsumerImpl.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup/ae/SmokerNamedEntityLookupConsumerImpl.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup/ae/UnknownSmokerNamedEntityLookupConsumerImpl.java
A ctakes-smoking-status/src/main/resources
A ctakes-smoking-status/src/main/resources/org
A ctakes-smoking-status/src/main/resources/org/apache
A ctakes-smoking-status/src/main/resources/org/apache/ctakes
A ctakes-smoking-status/src/main/resources/org/apache/ctakes/smokingstatus
A ctakes-smoking-status/src/main/resources/org/apache/ctakes/smokingstatus/types
A ctakes-smoking-status/src/main/resources/org/apache/ctakes/smokingstatus/types/TypeSystem.xml
A ctakes-smoking-status/data
A ctakes-smoking-status/data/test
AU ctakes-smoking-status/data/test/doc1_07543210_sample_current.txt
AU ctakes-smoking-status/data/test/doc2_07543210_sample_current.txt
A ctakes-smoking-status/data/test/output
AU ctakes-smoking-status/data/test/output/record_resolution.txt
AU ctakes-smoking-status/data/test/doc1_07543210_sample_past_smoker.txt
AU ctakes-smoking-status/data/test/doc2_07543210_sample_past_smoker.txt
A ctakes-smoking-status/data/test/cda
A ctakes-smoking-status/data/test/cda/testpatient_cn_1.xml
AU ctakes-smoking-status/data/test/doc1_07543210_sample_unknown.txt
A ctakes-smoking-status/launch
AU ctakes-smoking-status/launch/UIMA_CPE_GUI--Smokin_Status.launch
AU ctakes-smoking-status/launch/UIMA CPE GUI (SmokingStatus).launch
AU ctakes-smoking-status/launch/UIMA CAS Visual Debugger (Smoking Status).launch
A ctakes-smoking-status/pom.xml
AU ctakes-smoking-status/README
A ctakes-smoking-status/desc
A ctakes-smoking-status/desc/collection_processing_engine
AU ctakes-smoking-status/desc/collection_processing_engine/Sample_SmokingStatus_output_flatfile.xml
AU ctakes-smoking-status/desc/collection_processing_engine/Sample_SmokingStatus_output_cda.xml
A ctakes-smoking-status/desc/cas_consumer
AU ctakes-smoking-status/desc/cas_consumer/RecordResolutionCasConsumer.xml
A ctakes-smoking-status/desc/analysis_engine
AU ctakes-smoking-status/desc/analysis_engine/PcsClassifierAnnotator_libsvm.xml
AU ctakes-smoking-status/desc/analysis_engine/ExternalBaseAggregateTAE.xml
AU ctakes-smoking-status/desc/analysis_engine/SimulatedProdSmokingTAE.xml
AU ctakes-smoking-status/desc/analysis_engine/ClassifiableEntriesAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/KuRuleBasedClassifierAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/NonsmokerDictionaryLookupAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/ProductionPostSentenceAggregate_step2_libsvm.xml
AU ctakes-smoking-status/desc/analysis_engine/SmokingStatusDictionaryLookupAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/ArtificialSentenceAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/ProductionPostSentenceAggregate_step1.xml
AU ctakes-smoking-status/desc/analysis_engine/Sentence.xml
AU ctakes-smoking-status/desc/analysis_engine/ExternalBaseAggregateTAE_CDA.xml
AU ctakes-smoking-status/desc/analysis_engine/SimulatedProdSmokingTAE_CDA.xml
AU ctakes-smoking-status/desc/analysis_engine/SentenceAdjuster.xml
AU ctakes-smoking-status/desc/analysis_engine/ResolutionAnnotator.xml
U .
At revision 1814764
Parsing POMs
Established TCP socket on 46348
maven35-agent.jar already up to date
maven35-interceptor.jar already up to date
maven3-interceptor-commons.jar already up to date
[ctakes-trunk-Java-1.9] $ /home/jenkins/tools/java/latest1.9/bin/java -Xmx4g -Xms256m -Dmaven.test.failure.ignore=false -cp /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging jenkins.maven3.agent.Maven35Main /home/jenkins/tools/maven/apache-maven-3.5.0 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven35-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 46348
ERROR: Failed to parse POMs
java.io.IOException: Cannot run program "/home/jenkins/tools/java/latest1.9/bin/java" (in directory "<https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/")>: error=2, No such file or directory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
at ......remote call to ubuntu-eu3(Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.Launcher$RemoteLauncher.launch(Launcher.java:1053)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:278)
at hudson.maven.ProcessCache.get(ProcessCache.java:236)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:804)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.io.IOException: error=2, No such file or directory
at java.lang.UNIXProcess.forkAndExec(Native Method)
at java.lang.UNIXProcess.<init>(UNIXProcess.java:247)
at java.lang.ProcessImpl.start(ProcessImpl.java:134)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
Build failed in Jenkins: ctakes-trunk-Java-1.9 #18
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/18/display/redirect?page=changes>
Changes:
[seanfinan] FileTreeReader : Allow specification of a single file
------------------------------------------
[...truncated 970.54 KB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.708 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 7.535 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.816 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 9.425 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 5.496 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 26.274 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.360 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.396 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 5.935 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.461 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.900 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.305 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 11.477 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.021 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.319 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 18.993 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.489 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.591 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 4.963 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 5.022 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.753 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 8.054 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.132 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.733 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.924 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.645 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.317 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.721 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 37.616 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.004 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.625 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.680 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 10.906 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:47 min]
[INFO] Apache cTAKES CoReference Resolver ................. FAILURE [ 8.631 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.786 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.755 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.779 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.018 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.905 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.304 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.780 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.691 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.821 s]
[INFO] ctakes-examples .................................... SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.681 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.471 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:20 min
[INFO] Finished at: 2017-11-09T16:19:07Z
[INFO] Final Memory: 76M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 42928](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #17
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/17/display/redirect>
------------------------------------------
[...truncated 1.00 MB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.697 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.152 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.982 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 9.300 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.697 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 25.088 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.087 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.348 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.313 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.538 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.079 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.395 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 16.425 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.159 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.215 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 34.998 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 20.258 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.727 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.665 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.931 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.802 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.462 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.368 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.948 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 4.186 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.782 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.294 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.728 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 34.468 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.263 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.850 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.132 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 11.467 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:39 min]
[INFO] Apache cTAKES CoReference Resolver ................. FAILURE [ 7.281 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 3.021 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.374 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.919 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.889 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.917 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 6.869 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.885 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.919 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.936 s]
[INFO] ctakes-examples .................................... SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.698 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.654 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:05 min
[INFO] Finished at: 2017-11-08T17:21:13Z
[INFO] Final Memory: 70M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 33883](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #16
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/16/display/redirect>
------------------------------------------
Started by an SCM change
ERROR: Issue with creating launcher for agent ubuntu-4. The agent is being disconnected
[EnvInject] - Loading node environment variables.
ERROR: SEVERE ERROR occurs
org.jenkinsci.lib.envinject.EnvInjectException: hudson.remoting.ChannelClosedException: channel is already closed
at org.jenkinsci.plugins.envinject.service.EnvironmentVariablesNodeLoader.gatherEnvVarsForNode(EnvironmentVariablesNodeLoader.java:95)
at org.jenkinsci.plugins.envinject.EnvInjectListener.loadEnvironmentVariablesNode(EnvInjectListener.java:80)
at org.jenkinsci.plugins.envinject.EnvInjectListener.setUpEnvironment(EnvInjectListener.java:44)
at hudson.model.AbstractBuild$AbstractBuildExecution.createLauncher(AbstractBuild.java:534)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:454)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: hudson.remoting.ChannelClosedException: channel is already closed
at hudson.remoting.Channel.send(Channel.java:613)
at hudson.remoting.Request.call(Request.java:130)
at hudson.remoting.Channel.call(Channel.java:838)
at hudson.FilePath.act(FilePath.java:1082)
at org.jenkinsci.plugins.envinject.service.EnvironmentVariablesNodeLoader.gatherEnvVarsForNode(EnvironmentVariablesNodeLoader.java:64)
... 8 more
Caused by: java.io.IOException
at hudson.remoting.Channel.close(Channel.java:1301)
at hudson.slaves.ChannelPinger$1.onDead(ChannelPinger.java:180)
at hudson.remoting.PingThread.ping(PingThread.java:130)
at hudson.remoting.PingThread.run(PingThread.java:86)
Caused by: java.util.concurrent.TimeoutException: Ping started at 1510144865058 hasn't completed by 1510145106242
... 2 more
[EnvInject] - [ERROR] - SEVERE ERROR occurs: channel is already closed
Build failed in Jenkins: ctakes-trunk-Java-1.9 #15
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/15/display/redirect?page=changes>
Changes:
[alexz] CTAKES-465: fix deprecated FileLocator.getFullPath
------------------------------------------
[...truncated 983.28 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.434 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.732 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.769 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.494 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 5.262 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 26.261 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.837 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.494 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 7.561 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.724 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.398 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.213 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 13.081 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.104 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.663 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 23.528 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.332 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.541 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 6.069 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 5.162 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.625 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.629 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.019 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.875 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.503 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.690 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.028 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 20.175 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 39.735 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.400 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.520 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 8.076 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.789 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:46 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.247 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.680 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.872 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.636 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.009 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.631 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.112 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.610 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.112 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.851 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.718 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.479 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.576 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:00 min
[INFO] Finished at: 2017-10-31T00:28:12Z
[INFO] Final Memory: 80M/266M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 56713](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #14
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/14/display/redirect?page=changes>
Changes:
[alexz] CTAKES-463: update deprecated FileLocator.locateFile with FileLocator.getFile
------------------------------------------
[...truncated 984.58 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.728 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.572 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.683 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.375 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 5.056 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 25.840 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 4.974 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.298 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.174 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.341 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.781 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.116 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 11.853 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.053 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.248 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 22.871 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.324 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 3.203 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.211 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.747 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.511 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.360 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 2.989 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.629 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.365 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.775 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.109 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 19.483 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 40.227 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.991 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.469 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 18.969 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 11.440 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:53 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.211 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.750 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.042 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.573 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.946 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.632 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.038 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.594 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.443 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.557 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.853 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.532 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.475 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:10 min
[INFO] Finished at: 2017-10-30T02:19:20Z
[INFO] Final Memory: 66M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 46807](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #13
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/13/display/redirect?page=changes>
Changes:
[seanfinan] Keep lookup fast-res in distributable
[seanfinan] include piper files
[seanfinan] uimaj-tools is needed for the uima cpe and cvd gui profiles
------------------------------------------
[...truncated 992.75 KB...]
[INFO] ctakes-examples .................................... SUCCESS [ 10.136 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 1.465 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.637 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:30 min
[INFO] Finished at: 2017-10-26T17:38:23Z
[INFO] Final Memory: 69M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 40447](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #12
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/12/display/redirect?page=changes>
Changes:
[seanfinan] Allow comma-separated semantic group codes in blacklist files.
[seanfinan] Change from deprecated FileLocator.locateFile(..) to getFile(..)
Remove use of deprecated getCasInitializer()
[seanfinan] CTAKES-470 : throw exception (and exit) if piper cannot be loaded. Exceptions saved to log file.
------------------------------------------
[...truncated 318.76 KB...]
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/SRLSharedParserModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/DependencySharedModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/SRLSharedModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/SRLSharedPredictionModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/SRLSharedRoleModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/LemmatizerSharedModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/ClearDependencyUtility.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/DependencyRegex.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/Delim.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/DependencyPath.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/DependencyUtility.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/AnnotationDepUtils.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/SRLUtility.java
A ctakes-dependency-parser/src/main/java/META-INF
A ctakes-dependency-parser/src/main/java/META-INF/org.apache.uima.fit
A ctakes-dependency-parser/src/main/java/META-INF/org.apache.uima.fit/types.txt
A ctakes-dependency-parser/src/test
A ctakes-dependency-parser/src/test/java
A ctakes-dependency-parser/src/test/java/org
A ctakes-dependency-parser/src/test/java/org/apache
A ctakes-dependency-parser/src/test/java/org/apache/ctakes
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser/ae
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser/ae/util
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser/ae/util/TestClearNLPAnalysisEngines.java
A ctakes-dependency-parser/pom.xml
A ctakes-dependency-parser/resources
A ctakes-temporal-res
A ctakes-temporal-res/LICENSE
A ctakes-temporal-res/src
A ctakes-temporal-res/src/test
A ctakes-temporal-res/src/main
A ctakes-temporal-res/src/main/resources
A ctakes-temporal-res/src/main/resources/eventDict.txt
A ctakes-temporal-res/src/main/resources/org
A ctakes-temporal-res/src/main/resources/org/apache
A ctakes-temporal-res/src/main/resources/org/apache/ctakes
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/doctimerel
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/doctimerel/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventannotator
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventannotator/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/contextualmodality
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/contextualmodality/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime/model.jar
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime/Event_Time_with_UMLS_filter.txt
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime/Event_Time_no_UMLS_filter.txt
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime/READEME.txt
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventevent
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventevent/Event_Event_UMLS_doubleFilter_useSystemEvents.txt
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventevent/model.jar
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventevent/READEME.txt
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/salience
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/salience/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/section
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/section/ccda_sections.txt
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/timeannotator
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/timeannotator/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/pipeline
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/pipeline/TemporalSubPipe.piper
A ctakes-temporal-res/pom.xml
A LICENSE
A ctakes-drug-ner-res
A ctakes-drug-ner-res/pom.xml
A ctakes-drug-ner-res/LICENSE
A ctakes-drug-ner-res/src
A ctakes-drug-ner-res/src/test
A ctakes-drug-ner-res/src/main
A ctakes-drug-ner-res/src/main/resources
A ctakes-drug-ner-res/src/main/resources/org
A ctakes-drug-ner-res/src/main/resources/org/apache
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/tokenizer
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/tokenizer/hyphen_freq.txt
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/types
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/types/TypeSystem.xml
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/lookup
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/lookup/LookupDesc_DrugNER.xml
A ctakes-gui-res
A ctakes-gui-res/src
A ctakes-gui-res/src/test
A ctakes-gui-res/src/test/java
A ctakes-gui-res/src/main
A ctakes-gui-res/src/main/resources
A ctakes-gui-res/src/main/resources/org
A ctakes-gui-res/src/main/resources/org/apache
A ctakes-gui-res/src/main/resources/org/apache/ctakes
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/UnwantedSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/CtakesSnomedTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/RightAbbreviations.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/RemovalColonTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/ConversionSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/RemovalPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/ModifierSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/UnwantedPrefixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/CtakesSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/CtakesDrugTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/RemovalSuffixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RightAbbreviations.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RemovalColonTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/emptyAnatTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/ConversionSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RemovalPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/TimNonDrugSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/ModifierSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/UnwantedPrefixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/TimDrugTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/TimOtherTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RemovalSuffixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RemovalFunctionTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/UnwantedSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/TimSpecificTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RemovalColonTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/KeepPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/UnwantedCuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/ModifierSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/UnwantedTexts.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/CtakesSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RemovalFunctionTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/CtakesAnatTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/CtakesSnomedTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RightAbbreviations.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/ConversionSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RemovalPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/UnwantedPrefixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/CtakesDrugTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RemovalSuffixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/UnwantedSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/CtakesDrugTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RemovalSuffixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RemovalFunctionTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/UnwantedSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/CtakesSnomedTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RightAbbreviations.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RemovalColonTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/ConversionSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RemovalPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/ModifierSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/UnwantedPrefixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/CtakesSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesFindTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesAnatTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesProcTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesAllTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/UmlsAllSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesDisoTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/UmlsAllTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Package.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/blueup.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Help_32.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/SavePiper.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/PlusMark.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BlueRightArrow.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/OpenPiper.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/CheckRun.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/GreenArrowIn.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Help_48.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Parameters.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/RunPiper.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/FindOnPc_48.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Utilities.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/PiperFile.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/bluedown.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BlueGearYellowGear.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Folder_Blue.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BoxOfStuff.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BlueGear.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/redcircleno.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/RunReady.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/NewPiper.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Write.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BlueArrowOut.png
A ctakes-gui-res/pom.xml
U .
At revision 1813319
Parsing POMs
Downloaded artifact http://repo.maven.apache.org/maven2/org/cleartk/cleartk/2.0.0/cleartk-2.0.0.pom
Established TCP socket on 43989
maven35-agent.jar already up to date
maven35-interceptor.jar already up to date
maven3-interceptor-commons.jar already up to date
[ctakes-trunk-Java-1.9] $ /home/jenkins/tools/java/latest1.9/bin/java -Xmx4g -Xms256m -Dmaven.test.failure.ignore=false -cp /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging jenkins.maven3.agent.Maven35Main /home/jenkins/tools/maven/apache-maven-3.5.0 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven35-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 43989
ERROR: Failed to parse POMs
java.io.IOException: Cannot run program "/home/jenkins/tools/java/latest1.9/bin/java" (in directory "<https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/")>: error=2, No such file or directory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
at ......remote call to H26(Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.Launcher$RemoteLauncher.launch(Launcher.java:1053)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:278)
at hudson.maven.ProcessCache.get(ProcessCache.java:236)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:804)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.io.IOException: error=2, No such file or directory
at java.lang.UNIXProcess.forkAndExec(Native Method)
at java.lang.UNIXProcess.<init>(UNIXProcess.java:247)
at java.lang.ProcessImpl.start(ProcessImpl.java:134)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
Build failed in Jenkins: ctakes-trunk-Java-1.9 #11
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/11/display/redirect?page=changes>
Changes:
[seanfinan] Set document count in patient note store
[seanfinan] patient store, etc. use total doc count instead of previous/next
------------------------------------------
[...truncated 991.51 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 16.990 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 17.460 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 4.968 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.766 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 16.154 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 35.823 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.694 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 15.137 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 8.773 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.839 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.087 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.159 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 18.566 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.905 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 6.896 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 41.779 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.693 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.646 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.020 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.841 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 16.398 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.283 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.369 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.938 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 13.896 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.642 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.264 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 29.773 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 54.547 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.645 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.577 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.349 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 53.265 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:08 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.050 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 12.614 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.005 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 14.178 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.864 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 3.012 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 16.168 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.733 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 25.431 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 49.068 s]
[INFO] ctakes-examples .................................... SUCCESS [ 46.710 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 31.003 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 32.837 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 18:53 min
[INFO] Finished at: 2017-10-24T21:18:09Z
[INFO] Final Memory: 69M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 42079](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #10
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/10/display/redirect?page=changes>
Changes:
[seanfinan] Add patient identifier get()
[seanfinan] Add text patientIdentifier to metadata type
------------------------------------------
[...truncated 995.01 KB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 15.129 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 2.969 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 1.249 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 5.477 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 2.872 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 21.139 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 2.795 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 1.598 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 3.536 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 1.532 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 2.049 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 2.019 s]
[JENKINS] Archiving disabled
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 28.079 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 2.762 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 3.144 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 50.687 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 3.094 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 13.123 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 3.118 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 3.081 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 1.748 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 5.166 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 1.772 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 1.203 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.036 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 1.864 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 2.885 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 20.775 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 32.030 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 30.750 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 18.443 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 32.896 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 45.730 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:31 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [01:07 min]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 34.141 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 54.129 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 49.555 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 30.763 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 17.096 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [01:04 min]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 29.858 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 50.589 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 45.791 s]
[INFO] ctakes-examples .................................... SUCCESS [01:02 min]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 30.649 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 52.023 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 26:55 min
[INFO] Finished at: 2017-10-24T04:11:05Z
[INFO] Final Memory: 71M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 59827](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped