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Posted to issues@arrow.apache.org by "Luke Higgins (JIRA)" <ji...@apache.org> on 2017/03/27 12:30:41 UTC
[jira] [Updated] (ARROW-716) error building arrow/python
[ https://issues.apache.org/jira/browse/ARROW-716?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Luke Higgins updated ARROW-716:
-------------------------------
Description:
[root@localhost python]# /opt/anaconda3/bin/python setup.py build_ext --build-type=release --inplace --with-parquet
/opt/anaconda3/lib/python3.6/distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_requires'
warnings.warn(msg)
running build_ext
cmake -DPYTHON_EXECUTABLE=/opt/anaconda3/bin/python -DPYARROW_BUILD_TESTS=off -DPYARROW_BUILD_PARQUET=on -DCMAKE_BUILD_TYPE=release /root/arrow-master/python
INFO Using built-in specs.
COLLECT_GCC=/usr/bin/c++
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux
Thread model: posix
gcc version 4.8.5 20150623 (Red Hat 4.8.5-11) (GCC)
Selected compiler gcc 4.8.5
Configured for RELEASE build (set with cmake -DCMAKE_BUILD_TYPE={release,debug,...})
-- Build Type: RELEASE
Using static linking for RELEASE builds
collect2 version 4.8.5 20150623 (Red Hat 4.8.5-11)
/usr/bin/ld --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. --version -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o
Using ld linker
-- Searching for Python libs in /opt/anaconda3/lib64;/opt/anaconda3/lib;/opt/anaconda3/lib/python3.6/config-3.6m-x86_64-linux-gnu
-- Looking for python3.6m
-- Found Python lib /opt/anaconda3/lib/libpython3.6m.so
-- Searching for Python libs in /opt/anaconda3/lib64;/opt/anaconda3/lib;/opt/anaconda3/lib/python3.6/config-3.6m-x86_64-linux-gnu
-- Looking for python3.6m
-- Found Python lib /opt/anaconda3/lib/libpython3.6m.so
-- Found the Parquet library: /usr/local/lib/libparquet.so
-- Found the Parquet Arrow library: /usr/local/lib
-- Found the Arrow core library: /usr/local/lib/libarrow.so
-- Found the Arrow IO library: /usr/local/lib/libarrow_io.so
-- Found the Arrow IPC library: /usr/local/lib/libarrow_ipc.so
-- Found the Arrow jemalloc library: /usr/local/lib/libarrow_jemalloc.so
Added shared library dependency arrow: /usr/local/lib/libarrow.so
Added shared library dependency arrow_io: /usr/local/lib/libarrow_io.so
Added shared library dependency arrow_ipc: /usr/local/lib/libarrow_ipc.so
Added shared library dependency arrow_python: /usr/local/lib/libarrow_python.so
Added shared library dependency parquet_arrow: /usr/local/lib/libparquet_arrow.so
-- Configuring done
-- Generating done
-- Build files have been written to: /root/arrow-master/python/build/temp.linux-x86_64-3.6
make
[ 5%] Compiling Cython CXX source for _feather...
[ 5%] Built target _feather_pyx
Scanning dependencies of target _feather
[ 10%] Building CXX object CMakeFiles/_feather.dir/_feather.cxx.o
make[2]: *** No rule to make target `/usr/local/lib/libarrow_python.so', needed by `release/_feather.cpython-36m-x86_64-linux-gnu.so'. Stop.
make[1]: *** [CMakeFiles/_feather.dir/all] Error 2
make: *** [all] Error 2
error: command 'make' failed with exit status 2
> error building arrow/python
> ---------------------------
>
> Key: ARROW-716
> URL: https://issues.apache.org/jira/browse/ARROW-716
> Project: Apache Arrow
> Issue Type: Bug
> Environment: centos7, anaconda python 4.3.1, gcc 4.8.5
> Reporter: Luke Higgins
> Priority: Minor
>
> [root@localhost python]# /opt/anaconda3/bin/python setup.py build_ext --build-type=release --inplace --with-parquet
> /opt/anaconda3/lib/python3.6/distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_requires'
> warnings.warn(msg)
> running build_ext
> cmake -DPYTHON_EXECUTABLE=/opt/anaconda3/bin/python -DPYARROW_BUILD_TESTS=off -DPYARROW_BUILD_PARQUET=on -DCMAKE_BUILD_TYPE=release /root/arrow-master/python
> INFO Using built-in specs.
> COLLECT_GCC=/usr/bin/c++
> COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper
> Target: x86_64-redhat-linux
> Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux
> Thread model: posix
> gcc version 4.8.5 20150623 (Red Hat 4.8.5-11) (GCC)
> Selected compiler gcc 4.8.5
> Configured for RELEASE build (set with cmake -DCMAKE_BUILD_TYPE={release,debug,...})
> -- Build Type: RELEASE
> Using static linking for RELEASE builds
> collect2 version 4.8.5 20150623 (Red Hat 4.8.5-11)
> /usr/bin/ld --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. --version -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o
> Using ld linker
> -- Searching for Python libs in /opt/anaconda3/lib64;/opt/anaconda3/lib;/opt/anaconda3/lib/python3.6/config-3.6m-x86_64-linux-gnu
> -- Looking for python3.6m
> -- Found Python lib /opt/anaconda3/lib/libpython3.6m.so
> -- Searching for Python libs in /opt/anaconda3/lib64;/opt/anaconda3/lib;/opt/anaconda3/lib/python3.6/config-3.6m-x86_64-linux-gnu
> -- Looking for python3.6m
> -- Found Python lib /opt/anaconda3/lib/libpython3.6m.so
> -- Found the Parquet library: /usr/local/lib/libparquet.so
> -- Found the Parquet Arrow library: /usr/local/lib
> -- Found the Arrow core library: /usr/local/lib/libarrow.so
> -- Found the Arrow IO library: /usr/local/lib/libarrow_io.so
> -- Found the Arrow IPC library: /usr/local/lib/libarrow_ipc.so
> -- Found the Arrow jemalloc library: /usr/local/lib/libarrow_jemalloc.so
> Added shared library dependency arrow: /usr/local/lib/libarrow.so
> Added shared library dependency arrow_io: /usr/local/lib/libarrow_io.so
> Added shared library dependency arrow_ipc: /usr/local/lib/libarrow_ipc.so
> Added shared library dependency arrow_python: /usr/local/lib/libarrow_python.so
> Added shared library dependency parquet_arrow: /usr/local/lib/libparquet_arrow.so
> -- Configuring done
> -- Generating done
> -- Build files have been written to: /root/arrow-master/python/build/temp.linux-x86_64-3.6
> make
> [ 5%] Compiling Cython CXX source for _feather...
> [ 5%] Built target _feather_pyx
> Scanning dependencies of target _feather
> [ 10%] Building CXX object CMakeFiles/_feather.dir/_feather.cxx.o
> make[2]: *** No rule to make target `/usr/local/lib/libarrow_python.so', needed by `release/_feather.cpython-36m-x86_64-linux-gnu.so'. Stop.
> make[1]: *** [CMakeFiles/_feather.dir/all] Error 2
> make: *** [all] Error 2
> error: command 'make' failed with exit status 2
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