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Posted to notifications@ctakes.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2017/09/29 19:17:54 UTC
Build failed in Jenkins: ctakes-trunk-Java-1.9 #3
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/3/display/redirect?page=changes>
Changes:
[tmill] Add script for extracting markables from a corpus for analysis.
------------------------------------------
[...truncated 952.02 KB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.651 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.714 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.681 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 8.743 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.417 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 29.072 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.142 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.368 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 5.857 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.668 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.859 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.170 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 10.763 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.160 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.767 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 19.315 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.453 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.611 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.249 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.688 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.651 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.281 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 2.996 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.632 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.422 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.568 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.080 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 19.329 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 39.603 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.050 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.523 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.689 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 11.563 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... FAILURE [ 25.287 s]
[INFO] Apache cTAKES CoReference Resolver ................. SKIPPED
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.682 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.002 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.724 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.383 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.717 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.483 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.699 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 13.752 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.554 s]
[INFO] ctakes-examples .................................... SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.570 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.038 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 07:11 min
[INFO] Finished at: 2017-09-29T19:17:44Z
[INFO] Final Memory: 77M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:153)
at hudson.remoting.UserRequest.perform(UserRequest.java:50)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:153)
at hudson.remoting.UserRequest.perform(UserRequest.java:50)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 42423](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1545)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:253)
at hudson.remoting.Channel.call(Channel.java:830)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:878)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:490)
at hudson.model.Run.execute(Run.java:1735)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:542)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:405)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:153)
at hudson.remoting.UserRequest.perform(UserRequest.java:50)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #32
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/32/display/redirect?page=changes>
Changes:
[tmill] Fix to patient-aware coreference with new API. Compiles and evaluates correctly.
------------------------------------------
[...truncated 324.93 KB...]
A ctakes-lvg/src/main/java/org
A ctakes-lvg/src/main/java/org/apache
A ctakes-lvg/src/main/java/org/apache/ctakes
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/LvgBaseTokenAnnotator.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/LvgSingleton.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/LvgAnnotator.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/ThreadSafeLvg.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/resource
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/resource/LvgCmdApiResourceImpl.java
A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/resource/LvgCmdApiResource.java
A ctakes-lvg/pom.xml
A ctakes-lvg/resources
A ctakes-lvg/resources/launch
AU ctakes-lvg/resources/launch/UIMA_CVD--LVG.launch
A ctakes-lvg/README
A ctakes-lvg/desc
A ctakes-lvg/desc/analysis_engine
A ctakes-lvg/desc/analysis_engine/LvgAnnotator.xml
A ctakes-lvg/desc/analysis_engine/AggregateAE.xml
A ctakes-context-tokenizer
A ctakes-context-tokenizer/data
A ctakes-context-tokenizer/data/test
A ctakes-context-tokenizer/data/test/output
A ctakes-context-tokenizer/pom.xml
A ctakes-context-tokenizer/resources
A ctakes-context-tokenizer/resources/launch
A ctakes-context-tokenizer/README
A ctakes-context-tokenizer/desc
A ctakes-context-tokenizer/desc/analysis_engine
A ctakes-context-tokenizer/desc/analysis_engine/TestTAE.xml
A ctakes-context-tokenizer/desc/analysis_engine/AggregateAE.xml
A ctakes-context-tokenizer/desc/analysis_engine/ContextDependentTokenizerAnnotator.xml
A ctakes-context-tokenizer/LICENSE
A ctakes-context-tokenizer/src
A ctakes-context-tokenizer/src/test
A ctakes-context-tokenizer/src/test/java
A ctakes-context-tokenizer/src/test/java/org
A ctakes-context-tokenizer/src/test/java/org/apache
A ctakes-context-tokenizer/src/test/java/org/apache/ctakes
A ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer
A ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae
AU ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae/TestContextDependentTokenizerAnnotator.java
A ctakes-context-tokenizer/src/main
A ctakes-context-tokenizer/src/main/java
A ctakes-context-tokenizer/src/main/java/org
A ctakes-context-tokenizer/src/main/java/org/apache
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae/ContextDependentTokenizerAnnotator.java
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/context
A ctakes-ne-contexts-res
A ctakes-ne-contexts-res/pom.xml
A ctakes-ne-contexts-res/LICENSE
A ctakes-ne-contexts-res/src
A ctakes-ne-contexts-res/src/test
A ctakes-ne-contexts-res/src/main
A ctakes-ne-contexts-res/src/main/resources
A ctakes-ne-contexts-res/src/main/resources/org
A ctakes-ne-contexts-res/src/main/resources/org/apache
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline/NeContextsSubPipe.piper
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc/NegationAnnotator.xml
A ctakes-chunker
A ctakes-chunker/data
A ctakes-chunker/data/chunk
A ctakes-chunker/data/chunk/combinations
A ctakes-chunker/data/chunk/ptb
A ctakes-chunker/data/chunk/ptb/README
A ctakes-chunker/data/chunk/genia
A ctakes-chunker/data/chunk/genia/README
A ctakes-chunker/data/chunk/genia/genia.opennlp.chunks
A ctakes-chunker/data/treebank
A ctakes-chunker/data/treebank/genia
A ctakes-chunker/data/treebank/genia/names-00.txt
A ctakes-chunker/data/treebank/genia/00
A ctakes-chunker/data/treebank/genia/names-01.txt
A ctakes-chunker/data/treebank/genia/01
A ctakes-chunker/data/treebank/genia/README
A ctakes-chunker/pom.xml
A ctakes-chunker/resources
A ctakes-chunker/resources/launch
AU ctakes-chunker/resources/launch/ChunkAdjusterTests.launch
AU ctakes-chunker/resources/launch/chunker.launch
AU ctakes-chunker/resources/launch/UIMA_CPE_GUI--chunker.launch
A ctakes-chunker/README
A ctakes-chunker/ExampleTrainChunker.bat
A ctakes-chunker/desc
A ctakes-chunker/desc/AggregateAE.xml
A ctakes-chunker/desc/collection_processing_engine
A ctakes-chunker/desc/Chunker.xml
A ctakes-chunker/desc/test
A ctakes-chunker/desc/test/ChunkerAggregate.xml
A ctakes-chunker/desc/test/ChunkerCPE.xml
A ctakes-chunker/desc/test/POSTagger.xml
A ctakes-chunker/desc/test/PhraseTypeChunkerAggregate.xml
A ctakes-chunker/desc/test/Chunker.xml
A ctakes-chunker/desc/test/TokenizerAnnotator.xml
A ctakes-chunker/desc/test/ChunkAdjusterAggregate.xml
A ctakes-chunker/desc/test/ChunkerCpeUsingPosTagDictionary.xml
A ctakes-chunker/desc/test/SimpleSegmentAnnotator.xml
A ctakes-chunker/desc/test/AdjustNounPhraseToIncludeFollowingPPNP.xml
A ctakes-chunker/desc/SimpleSegmentAnnotator.xml
A ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingNP.xml
A ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingPPNP.xml
A ctakes-chunker/desc/AdjustOPhraseToIncludeFollowingO.xml
A ctakes-chunker/desc/ChunkerAggregate.xml
A ctakes-chunker/desc/ChunkerCPE.xml
A ctakes-chunker/desc/analysis_engine
A ctakes-chunker/desc/ChunkAdjuster.xml
A ctakes-chunker/desc/POSTagger.xml
A ctakes-chunker/LICENSE
A ctakes-chunker/scripts
A ctakes-chunker/scripts/java
A ctakes-chunker/scripts/java/data
A ctakes-chunker/scripts/java/data/chunk
A ctakes-chunker/scripts/java/data/chunk/genia
A ctakes-chunker/scripts/java/data/chunk/genia/Genia2PTB.java
A ctakes-chunker/scripts/java/data/chunk/Chunklink2OpenNLP.java
A ctakes-chunker/scripts/perl
A ctakes-chunker/scripts/perl/README
A ctakes-chunker/scripts/groovy
A ctakes-chunker/scripts/groovy/data
A ctakes-chunker/scripts/groovy/data/chunk
A ctakes-chunker/scripts/groovy/data/chunk/TagReport.groovy
A ctakes-chunker/src
A ctakes-chunker/src/test
A ctakes-chunker/src/test/resources
A ctakes-chunker/src/test/resources/data
A ctakes-chunker/src/test/resources/data/README
A ctakes-chunker/src/test/resources/data/output
A ctakes-chunker/src/test/resources/data/output/text1.txt.included.used.tag-dictionary.xml
A ctakes-chunker/src/test/resources/data/output/NotesIIST_RTF.DTD
A ctakes-chunker/src/test/resources/data/output/text1.txt.included.xml
A ctakes-chunker/src/test/resources/data/unit-test.opennlp.chunks
A ctakes-chunker/src/test/resources/data/text-files
A ctakes-chunker/src/test/resources/data/text-files/text1.txt
A ctakes-chunker/src/test/java
A ctakes-chunker/src/test/java/org
A ctakes-chunker/src/test/java/org/apache
A ctakes-chunker/src/test/java/org/apache/ctakes
A ctakes-chunker/src/test/java/org/apache/ctakes/chunker
A ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkAdjusterTests.java
A ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkerTests.java
A ctakes-chunker/src/main
A ctakes-chunker/src/main/java
A ctakes-chunker/src/main/java/org
A ctakes-chunker/src/main/java/org/apache
A ctakes-chunker/src/main/java/org/apache/ctakes
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster/ChunkAdjuster.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/ChunkCreator.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/DefaultChunkCreator.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/PhraseTypeChunkCreator.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/Chunker.java
A ctakes-dependency-parser-res
A ctakes-dependency-parser-res/LICENSE
A ctakes-dependency-parser-res/src
A ctakes-dependency-parser-res/src/test
A ctakes-dependency-parser-res/src/main
A ctakes-dependency-parser-res/src/main/resources
A ctakes-dependency-parser-res/src/main/resources/org
A ctakes-dependency-parser-res/src/main/resources/org/apache
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred/mayo-en-pred-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/README
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/mayo-en-dep-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/mayo-en-srl-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/README
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/clearparser_models.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role/mayo-en-role-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/README
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/dictionary-1.3.1.jar
A ctakes-dependency-parser-res/pom.xml
AU KEYS
U .
At revision 1815625
Parsing POMs
Established TCP socket on 44993
maven35-agent.jar already up to date
maven35-interceptor.jar already up to date
maven3-interceptor-commons.jar already up to date
[ctakes-trunk-Java-1.9] $ /home/jenkins/tools/java/latest1.9/bin/java -Xmx4g -Xms256m -Dmaven.test.failure.ignore=false -cp /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging jenkins.maven3.agent.Maven35Main /home/jenkins/tools/maven/apache-maven-3.5.0 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven35-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 44993
ERROR: Failed to parse POMs
java.io.IOException: Cannot run program "/home/jenkins/tools/java/latest1.9/bin/java" (in directory "<https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/")>: error=2, No such file or directory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
at ......remote call to ubuntu-eu3(Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.Launcher$RemoteLauncher.launch(Launcher.java:1053)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:278)
at hudson.maven.ProcessCache.get(ProcessCache.java:236)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:804)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.io.IOException: error=2, No such file or directory
at java.lang.UNIXProcess.forkAndExec(Native Method)
at java.lang.UNIXProcess.<init>(UNIXProcess.java:247)
at java.lang.ProcessImpl.start(ProcessImpl.java:134)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
Build failed in Jenkins: ctakes-trunk-Java-1.9 #31
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/31/display/redirect?page=changes>
Changes:
[alexz] CTAKES-458: Upgrade apache parent pom, fix apache-rat
------------------------------------------
[...truncated 978.46 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 19.288 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 20.741 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 20.072 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 38.264 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 36.211 s]
[INFO] Apache cTAKES core ................................. SUCCESS [02:26 min]
[INFO] ctakes-gui ......................................... SUCCESS [ 55.137 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 40.462 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [01:00 min]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 38.936 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 55.160 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 36.771 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 55.171 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 51.052 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 35.670 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [01:29 min]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 36.717 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 34.808 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 41.829 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 38.120 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 34.425 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 41.275 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 17.625 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 18.149 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 36.806 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 37.609 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [01:02 min]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [01:25 min]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [01:52 min]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 43.103 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 15.421 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.867 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.627 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:09 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 24.167 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.993 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.175 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.912 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.397 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.797 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 8.229 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.812 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.462 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.848 s]
[INFO] ctakes-examples .................................... SUCCESS [ 24.064 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.929 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.202 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 37:02 min
[INFO] Finished at: 2017-11-17T18:48:38Z
[INFO] Final Memory: 75M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 41230](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #30
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/30/display/redirect?page=changes>
Changes:
[seanfinan] Boyscouting, replace explicit maven-exec version numbers
------------------------------------------
[...truncated 978.46 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 39.401 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [01:06 min]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.956 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 8.137 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.059 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 41.864 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 20.448 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 36.951 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 37.393 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 20.327 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 20.242 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 38.580 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 42.640 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 40.870 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 38.623 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [01:00 min]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 35.678 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 21.982 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 44.251 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 40.745 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 19.343 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 20.868 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 18.909 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 21.334 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 38.274 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 38.065 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 56.926 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [01:10 min]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [01:17 min]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 41.473 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 22.511 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 40.547 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [01:05 min]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:55 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [01:17 min]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 18.186 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 36.217 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 20.898 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 35.997 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 19.813 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 37.089 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 3.136 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 19.930 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.770 s]
[INFO] ctakes-examples .................................... SUCCESS [ 41.523 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 20.222 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.258 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 39:55 min
[INFO] Finished at: 2017-11-17T17:50:44Z
[INFO] Final Memory: 66M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 45670](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #29
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/29/display/redirect?page=changes>
Changes:
[seanfinan] Add piper gui profile
------------------------------------------
[...truncated 978.52 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [01:40 min]
[INFO] ctakes-gui-res ..................................... SUCCESS [01:49 min]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 52.532 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [01:46 min]
[INFO] Apache cTAKES utils ................................ SUCCESS [01:04 min]
[INFO] Apache cTAKES core ................................. SUCCESS [ 52.659 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 18.798 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 4.903 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 19.158 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 4.872 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 5.520 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 6.519 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 20.351 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 12.388 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 6.462 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 33.607 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 6.940 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 4.122 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 7.378 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 6.365 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 6.631 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 10.536 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 6.052 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 4.387 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 6.266 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 18.701 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 9.612 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 21.065 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 41.786 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 21.708 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 3.596 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 22.093 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 21.320 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:28 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 27.571 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 17.778 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 19.283 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 4.702 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 10.284 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 19.461 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 12.780 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 4.605 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 6.289 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 10.155 s]
[INFO] ctakes-examples .................................... SUCCESS [ 28.190 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 8.612 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.389 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 24:08 min
[INFO] Finished at: 2017-11-17T17:08:08Z
[INFO] Final Memory: 70M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 37001](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #28
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/28/display/redirect?page=changes>
Changes:
[seanfinan] Fix for typo (inattentiveness)
------------------------------------------
[...truncated 978.47 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.307 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 13.395 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 6.257 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 36.445 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 8.419 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 56.300 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 19.325 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 4.800 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 7.314 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 4.642 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 5.706 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 6.428 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 20.658 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 15.125 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 7.465 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 24.771 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 7.264 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 3.821 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 7.037 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 6.495 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 17.024 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 10.549 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 5.857 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 4.534 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 5.282 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 9.138 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 9.384 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 20.719 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 40.238 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 21.703 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 3.705 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 8.954 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 20.931 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:29 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 27.065 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 4.359 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 19.356 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 4.632 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 9.976 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 5.486 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 22.275 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 4.313 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 6.054 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 10.167 s]
[INFO] ctakes-examples .................................... SUCCESS [ 11.861 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 8.662 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.102 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 14:04 min
[INFO] Finished at: 2017-11-17T14:46:02Z
[INFO] Final Memory: 68M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 52475](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #27
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/27/display/redirect?page=changes>
Changes:
[alexz] CTAKES-480: fix pom.xml to remove exclusion for apache-profile
------------------------------------------
[...truncated 978.47 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 4.942 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.697 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 3.024 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 9.570 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.317 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 26.370 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 18.016 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.534 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.358 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.671 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.153 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.473 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 13.655 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.192 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.951 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 26.856 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 8.294 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 16.432 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.632 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 5.020 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.816 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 7.504 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.300 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.756 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.476 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.971 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.486 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 23.082 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 42.882 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.629 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 17.832 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 8.245 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.957 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:03 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.937 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.761 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.094 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.832 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.831 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.771 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.802 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.775 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.483 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.719 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.964 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.599 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.526 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 10:15 min
[INFO] Finished at: 2017-11-17T00:21:44Z
[INFO] Final Memory: 68M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 38498](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #26
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/26/display/redirect?page=changes>
Changes:
[alexz] CTAKES-479: add UmlsEnvironmentConfiguration.java
[alexz] CTAKES-479: skip testCPE when UMLS credentials not exported as env vars
------------------------------------------
[...truncated 978.46 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.539 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.796 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.866 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 8.859 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.313 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 24.620 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.144 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.440 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.159 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.464 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.288 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.396 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 12.231 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.205 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.952 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 23.575 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.445 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.624 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 17.670 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.963 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.817 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 7.608 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.265 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.763 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.625 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.844 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.471 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 21.804 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 40.289 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.251 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 21.857 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 32.260 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 48.637 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:29 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.374 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.943 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.051 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.928 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.220 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.758 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.801 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.837 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.594 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.629 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.946 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.647 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.434 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 11:13 min
[INFO] Finished at: 2017-11-16T23:21:02Z
[INFO] Final Memory: 66M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 45860](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #25
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/25/display/redirect?page=changes>
Changes:
[seanfinan] Followup checkin for patient view store
[seanfinan] Minor refactor (shorter names)
------------------------------------------
[...truncated 978.40 KB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.154 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.827 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.796 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.233 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.732 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 26.259 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.557 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.593 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.383 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.430 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.155 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.463 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 12.044 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.030 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.988 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 32.005 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 8.311 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.517 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.295 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 5.127 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.620 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.518 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.073 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.585 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.628 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.873 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.358 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 23.355 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 55.564 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.092 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.522 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.354 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.153 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:08 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 12.204 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 3.127 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.341 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 9.299 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 8.429 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.846 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 10.473 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 6.704 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 4.360 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.615 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.016 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.921 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.467 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 10:20 min
[INFO] Finished at: 2017-11-16T21:22:58Z
[INFO] Final Memory: 69M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 43131](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #24
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/24/display/redirect?page=changes>
Changes:
[seanfinan] Rewrite of Patient view cache
------------------------------------------
[...truncated 498.72 KB...]
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-ytex-res ---
[INFO]
[INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-ytex-res ---
[INFO]
[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-ytex-res ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 48 resources
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-ytex-res ---
[INFO] No sources to compile
[INFO]
[INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-ytex-res ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 0 resource
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-ytex-res ---
[INFO] No sources to compile
[INFO]
[INFO] --- maven-surefire-plugin:2.12.1:test (default-test) @ ctakes-ytex-res ---
[INFO] Surefire report directory: <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-ytex-res/target/surefire-reports>
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Results :
Tests run: 0, Failures: 0, Errors: 0, Skipped: 0
[JENKINS] Recording test results
[INFO]
[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-ytex-res ---
[INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-ytex-res/target/ctakes-ytex-res-4.0.1-SNAPSHOT.jar>
[INFO]
[INFO] --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-ytex-res ---
[INFO]
[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-ytex-res ---
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-ytex-res/target/ctakes-ytex-res-4.0.1-SNAPSHOT.jar> to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-ytex-res/4.0.1-SNAPSHOT/ctakes-ytex-res-4.0.1-SNAPSHOT.jar
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-ytex-res/pom.xml> to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-ytex-res/4.0.1-SNAPSHOT/ctakes-ytex-res-4.0.1-SNAPSHOT.pom
[JENKINS] Archiving disabled
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES YTEX
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES YTEX UIMA
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES YTEX Web
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES Distribution
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES Regression-test
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Skipping Apache cTAKES template filler
[INFO] This project has been banned from the build due to previous failures.
[INFO] ------------------------------------------------------------------------
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[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 7.259 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 13.511 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 6.118 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 36.900 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 8.927 s]
[INFO] Apache cTAKES core ................................. FAILURE [ 6.634 s]
[INFO] ctakes-gui ......................................... SKIPPED
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 4.852 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SKIPPED
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 4.731 s]
[INFO] Apache cTAKES chunker .............................. SKIPPED
[INFO] Apache cTAKES document preprocessor ................ SKIPPED
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 32.796 s]
[INFO] Apache cTAKES dictionary lookup .................... SKIPPED
[INFO] Apache cTAKES context dependent tokenizer .......... SKIPPED
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 28.148 s]
[INFO] Apache cTAKES LVG lexical tools .................... SKIPPED
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 3.831 s]
[INFO] Apache cTAKES named entity contexts ................ SKIPPED
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 6.249 s]
[INFO] Apache cTAKES Constituency Parser .................. SKIPPED
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 10.499 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 6.088 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 4.335 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 5.850 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SKIPPED
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 9.628 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 21.848 s]
[INFO] Apache cTAKES Dependency Parser .................... SKIPPED
[INFO] Apache cTAKES Assertion ............................ SKIPPED
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 3.669 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SKIPPED
[INFO] Apache cTAKES Relation Extractor ................... SKIPPED
[INFO] Apache cTAKES Temporal Information Extraction ...... SKIPPED
[INFO] Apache cTAKES CoReference Resolver ................. SKIPPED
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 4.120 s]
[INFO] Apache cTAKES Drug NER ............................. SKIPPED
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 4.352 s]
[INFO] Apache cTAKES Side Effects ......................... SKIPPED
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 5.465 s]
[INFO] Apache cTAKES Smoking Status ....................... SKIPPED
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 4.660 s]
[INFO] Apache cTAKES Assertion's zoner .................... SKIPPED
[INFO] ctakes-examples-res ................................ SUCCESS [ 10.126 s]
[INFO] ctakes-examples .................................... SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 8.447 s]
[INFO] Apache cTAKES YTEX ................................. SKIPPED
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 05:33 min
[INFO] Finished at: 2017-11-16T20:17:35Z
[INFO] Final Memory: 51M/256M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.4:compile (default-compile) on project ctakes-core: Compilation failure: Compilation failure:
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cr/FilesInDirectoryCollectionReader.java>:[113,26] [deprecation] locateFile(String) in FileLocator has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/patient/PatientNoteCollector.java>:[37,36] error: cannot find symbol
[ERROR] symbol: method addDocument(JCas)
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/PersonTitleFSM.java>:[121,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cr/FileTreeReader.java>:[126,39] error: cannot find symbol
[ERROR] symbol: method setDocCount(String,int)
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cr/FileTreeReader.java>:[130,78] error: cannot find symbol
[ERROR] symbol: method setDocCount(String,Integer)
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/DateFSM.java>:[272,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/util/ListIterable.java>:[34,50] [unchecked] unchecked cast
[ERROR] required: T
[ERROR] found: TOP
[ERROR] where T is a type-variable:
[ERROR] T extends Object declared in class FSListIterator
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/HtmlTableCasConsumer.java>:[93,41] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/HtmlTableCasConsumer.java>:[234,22] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/HtmlTableCasConsumer.java>:[337,27] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/HtmlTableCasConsumer.java>:[338,27] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/resource/StringIntegerMapResourceImpl.java>:[72,40] [deprecation] Integer(String) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/MeasurementFSM.java>:[247,17] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/MeasurementFSM.java>:[256,17] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/MeasurementFSM.java>:[284,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/sentence/SentenceDetectorCtakes.java>:[77,37] [deprecation] Double(double) in Double has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/sentence/SentenceDetectorCtakes.java>:[189,25] [deprecation] Double(double) in Double has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/ae/SentenceDetector.java>:[314,30] [deprecation] train(String,ObjectStream<SentenceSample>,boolean,Dictionary,TrainingParameters) in SentenceDetectorME has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/sentence/EndOfSentenceScannerImpl.java>:[66,19] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cc/TokenFreqCasConsumer.java>:[143,47] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/RangeFSM.java>:[147,17] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/RangeFSM.java>:[156,17] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/RangeFSM.java>:[184,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/FractionFSM.java>:[170,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/cr/JdbcCollectionReader.java>:[177,25] [unchecked] unchecked conversion
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/NegationFSM.java>:[386,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/patient/AbstractPatientConsumer.java>:[66,77] error: cannot find symbol
[ERROR] symbol: method getPatientIds()
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/patient/AbstractPatientConsumer.java>:[87,55] error: cannot find symbol
[ERROR] symbol: method getPatientCas(String)
[ERROR] location: class PatientNoteStore
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/ci/HyphenTextModifierImpl.java>:[76,45] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/ci/HyphenTextModifierImpl.java>:[113,45] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/resource/JdbcConnectionResourceImpl.java>:[92,22] [deprecation] Boolean(String) in Boolean has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/TimeFSM.java>:[150,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/RomanNumeralFSM.java>:[106,28] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/ctakes-core/src/main/java/org/apache/ctakes/core/fsm/machine/StatusIndicatorFSM.java>:[228,41] [deprecation] Integer(int) in Integer has been deprecated
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
[ERROR]
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR] mvn <goals> -rf :ctakes-core
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #23
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/23/display/redirect?page=changes>
Changes:
[seanfinan] MarkableHeadTreeCreator removed
------------------------------------------
[...truncated 978.28 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.104 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.030 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.890 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 9.706 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 20.731 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 28.305 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.178 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.741 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 10.501 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 5.052 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 10.251 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 10.005 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 21.494 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 10.082 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 15.235 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 47.719 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 12.692 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 11.735 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 17.380 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 15.558 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 10.657 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 14.967 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 9.713 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 9.947 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 4.394 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 4.176 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.930 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 23.729 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 43.090 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 8.114 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.592 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 8.031 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.637 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:53 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.772 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.833 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.570 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.837 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.900 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.839 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.570 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.916 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.665 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.673 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.186 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 4.310 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 6.432 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 12:35 min
[INFO] Finished at: 2017-11-15T13:25:22Z
[INFO] Final Memory: 68M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 36296](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #22
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/22/display/redirect?page=changes>
Changes:
[alexz] CTAKES-334: fix GramMatrixExporterImp::setBagOfWordsExporter signature
------------------------------------------
[...truncated 978.29 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.095 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.835 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.781 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 7.907 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.041 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 34.429 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.321 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.498 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 5.817 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.579 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.192 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.208 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 10.897 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.819 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.169 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 17.337 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.307 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.828 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.022 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.849 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.709 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.288 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.059 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.980 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.656 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.690 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.207 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.718 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 37.315 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.845 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.604 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.550 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 10.744 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:35 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 18.593 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.837 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.901 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.741 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.889 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.921 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.183 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.849 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.215 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.639 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.481 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.666 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.289 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 08:48 min
[INFO] Finished at: 2017-11-15T01:57:38Z
[INFO] Final Memory: 75M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 36188](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #21
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/21/display/redirect?page=changes>
Changes:
[seanfinan] CTAKES-441 : Add LabValueFinder annotator. Many thanks to the original author Kean Kaufmann.
[seanfinan] TextSpan refactor (package move). Prep for LabValueFinder
[alexz] "svn ignore IntelliJ IDEA project files - *.iml, .idea"
------------------------------------------
[...truncated 978.34 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.474 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.431 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.875 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.106 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.815 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 25.788 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.259 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.383 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 5.973 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.444 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.980 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.178 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 11.524 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.879 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.054 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 19.140 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.418 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.662 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.828 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.809 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.668 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.216 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.204 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.842 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.557 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.748 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.113 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.500 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 37.097 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.840 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.654 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.539 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 11.061 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:36 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 10.642 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.896 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.698 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.774 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.760 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.802 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.007 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 3.014 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.330 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.637 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.462 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.699 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.057 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 08:39 min
[INFO] Finished at: 2017-11-15T00:21:23Z
[INFO] Final Memory: 66M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 47046](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #20
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/20/display/redirect?page=changes>
Changes:
[seanfinan] Fix for possible bug involving too many open files. Apparently Files.lines() doesn't auto-close at eos.
------------------------------------------
[...truncated 1.21 MB...]
[INFO] ctakes-examples-res ................................ SUCCESS [ 3.056 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.523 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.801 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.594 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 10:17 min
[INFO] Finished at: 2017-11-13T18:29:48Z
[INFO] Final Memory: 73M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org timothy.miller@childrens.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org timothy.miller@childrens.harvard.edu sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org timothy.miller@childrens.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 35492](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #19
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/19/display/redirect?page=changes>
Changes:
[tmill] WIP: Fixes compiler error but coref eval still not working.
------------------------------------------
[...truncated 320.84 KB...]
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/knowtator/ArgumentInfo.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/knowtator/Span.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorConsumer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorTrain.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/TreeFeatureConsumer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorPipelineSingleCas.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationAnnotationViewer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/SelectiveRelationAnnotationViewer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorPipeline.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/Splitter.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/GoldAnnotationStatsCalculator.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/GoldAnnotationAnalysisPipeline.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/Constants.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/CategoricalDistribution.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/Stats.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/analysis
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/analysis/Utils.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/analysis/EventAndEntityViewer.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/data/analysis/GoldRelationViewer.java
A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/metastasis
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/metastasis/MetastasisAnaforaXMLReader.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/metastasis/AnatomicalSiteListExtractorPipeline.java
AU ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/metastasis/MetastasisXmiGenerationPipeline.java
A ctakes-relation-extractor/docs
A ctakes-relation-extractor/docs/todo.txt
A ctakes-relation-extractor/docs/knowtator.txt
A ctakes-relation-extractor/docs/readme.txt
A ctakes-relation-extractor/pom.xml
A ctakes-relation-extractor/resources
A ctakes-relation-extractor/resources/launch
AU ctakes-relation-extractor/resources/launch/UIMA_CPE--relation-extractor.launch
AU ctakes-relation-extractor/resources/launch/UIMA_CVD--relation-extractor.launch
A ctakes-relation-extractor/desc
A ctakes-relation-extractor/desc/analysis_engine
A ctakes-relation-extractor/desc/analysis_engine/LocationOfRelationExtractorAnnotator.xml
A ctakes-relation-extractor/desc/analysis_engine/DegreeOfRelationExtractorAnnotator.xml
A ctakes-relation-extractor/desc/analysis_engine/ModifierExtractorAnnotator.xml
AU ctakes-relation-extractor/desc/analysis_engine/RelationExtractorAggregate.xml
AU ctakes-relation-extractor/desc/analysis_engine/RelationExtractorPreprocessor.xml
A ctakes-relation-extractor/desc/analysis_engine/RemoteDictionary.xml
A ctakes-relation-extractor/metadata
A ctakes-relation-extractor/metadata/install.xml
A ctakes-preprocessor
A ctakes-preprocessor/LICENSE
A ctakes-preprocessor/src
A ctakes-preprocessor/src/test
A ctakes-preprocessor/src/test/data
A ctakes-preprocessor/src/test/data/output
A ctakes-preprocessor/src/test/data/output/testpatient_cn_1.xml.included.xml
A ctakes-preprocessor/src/test/resources
A ctakes-preprocessor/src/test/resources/testpatient_cn_1.xml
A ctakes-preprocessor/src/test/resources/NotesIIST_RTF.DTD
A ctakes-preprocessor/src/test/java
A ctakes-preprocessor/src/test/java/org
A ctakes-preprocessor/src/test/java/org/apache
A ctakes-preprocessor/src/test/java/org/apache/ctakes
A ctakes-preprocessor/src/test/java/org/apache/ctakes/preprocessor
A ctakes-preprocessor/src/test/java/org/apache/ctakes/preprocessor/ClinicalNotePreProcessorTest.java
A ctakes-preprocessor/src/main
A ctakes-preprocessor/src/main/resources
A ctakes-preprocessor/src/main/resources/org
A ctakes-preprocessor/src/main/resources/org/apache
A ctakes-preprocessor/src/main/resources/org/apache/ctakes
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/cda
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/cda/NotesIIST_RTF.DTD
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/tokenizer
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/tokenizer/hyphenated.txt
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/tokenizer/hyphenated_sample.txt
A ctakes-preprocessor/src/main/resources/org/apache/ctakes/preprocessor/tokenizer/hyphenated.README.mayo
A ctakes-preprocessor/src/main/java
A ctakes-preprocessor/src/main/java/org
A ctakes-preprocessor/src/main/java/org/apache
A ctakes-preprocessor/src/main/java/org/apache/ctakes
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/DocumentMetaData.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/test
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/test/TestDriver.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/DTDloader.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/SegmentMetaData.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/Utility.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/ae
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/ae/CdaCasInitializer.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/PreProcessor.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/Annotation.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/IntegerRange.java
A ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/ClinicalNotePreProcessor.java
A ctakes-preprocessor/src/main/java/edu
A ctakes-preprocessor/src/main/java/edu/mayo
A ctakes-preprocessor/src/main/java/edu/mayo/bmi
A ctakes-preprocessor/src/main/java/edu/mayo/bmi/uima
A ctakes-preprocessor/pom.xml
A ctakes-preprocessor/resources
A ctakes-preprocessor/resources/launch
AU ctakes-preprocessor/resources/launch/document_preprocessor.launch
AU ctakes-preprocessor/resources/launch/UIMA_CPE_GUI--document_preprocessor.launch
A ctakes-preprocessor/README
A ctakes-preprocessor/desc
A ctakes-preprocessor/desc/CPE_CdaCasInitializer.xml
A ctakes-preprocessor/desc/AggregateAE.xml
A ctakes-preprocessor/desc/CdaCasInitializer.xml
A ctakes-smoking-status
A ctakes-smoking-status/metadata
AU ctakes-smoking-status/metadata/PEAR.properties
AU ctakes-smoking-status/metadata/setenv.txt
AU ctakes-smoking-status/metadata/install.xml
AU ctakes-smoking-status/LICENSE
A ctakes-smoking-status/src
A ctakes-smoking-status/src/main
A ctakes-smoking-status/src/main/java
A ctakes-smoking-status/src/main/java/org
A ctakes-smoking-status/src/main/java/org/apache
A ctakes-smoking-status/src/main/java/org/apache/ctakes
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/patientLevel
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/patientLevel/PatientLevelSmokingStatus.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/util
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/util/ClassifiableEntry.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/util/TruthValue.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/i2b2
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/context
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/context/negation
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/context/negation/NegationContextAnalyzer.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/context/NamedEntityContextAnalyzer.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/machine
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/machine/NegationFSM.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/SentenceAdjuster.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/ResolutionAnnotator.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/ClassifiableEntries.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/PcsClassifierAnnotator_libsvm.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/ae/KuRuleBasedClassifierAnnotator.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/cc
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/cc/RecordResolutionCasConsumer.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/Const.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/MLutil
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/MLutil/GenerateTrainingData.java
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup
A ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup/ae
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup/ae/NonSmokerNamedEntityLookupConsumerImpl.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup/ae/SmokerNamedEntityLookupConsumerImpl.java
AU ctakes-smoking-status/src/main/java/org/apache/ctakes/smokingstatus/lookup/ae/UnknownSmokerNamedEntityLookupConsumerImpl.java
A ctakes-smoking-status/src/main/resources
A ctakes-smoking-status/src/main/resources/org
A ctakes-smoking-status/src/main/resources/org/apache
A ctakes-smoking-status/src/main/resources/org/apache/ctakes
A ctakes-smoking-status/src/main/resources/org/apache/ctakes/smokingstatus
A ctakes-smoking-status/src/main/resources/org/apache/ctakes/smokingstatus/types
A ctakes-smoking-status/src/main/resources/org/apache/ctakes/smokingstatus/types/TypeSystem.xml
A ctakes-smoking-status/data
A ctakes-smoking-status/data/test
AU ctakes-smoking-status/data/test/doc1_07543210_sample_current.txt
AU ctakes-smoking-status/data/test/doc2_07543210_sample_current.txt
A ctakes-smoking-status/data/test/output
AU ctakes-smoking-status/data/test/output/record_resolution.txt
AU ctakes-smoking-status/data/test/doc1_07543210_sample_past_smoker.txt
AU ctakes-smoking-status/data/test/doc2_07543210_sample_past_smoker.txt
A ctakes-smoking-status/data/test/cda
A ctakes-smoking-status/data/test/cda/testpatient_cn_1.xml
AU ctakes-smoking-status/data/test/doc1_07543210_sample_unknown.txt
A ctakes-smoking-status/launch
AU ctakes-smoking-status/launch/UIMA_CPE_GUI--Smokin_Status.launch
AU ctakes-smoking-status/launch/UIMA CPE GUI (SmokingStatus).launch
AU ctakes-smoking-status/launch/UIMA CAS Visual Debugger (Smoking Status).launch
A ctakes-smoking-status/pom.xml
AU ctakes-smoking-status/README
A ctakes-smoking-status/desc
A ctakes-smoking-status/desc/collection_processing_engine
AU ctakes-smoking-status/desc/collection_processing_engine/Sample_SmokingStatus_output_flatfile.xml
AU ctakes-smoking-status/desc/collection_processing_engine/Sample_SmokingStatus_output_cda.xml
A ctakes-smoking-status/desc/cas_consumer
AU ctakes-smoking-status/desc/cas_consumer/RecordResolutionCasConsumer.xml
A ctakes-smoking-status/desc/analysis_engine
AU ctakes-smoking-status/desc/analysis_engine/PcsClassifierAnnotator_libsvm.xml
AU ctakes-smoking-status/desc/analysis_engine/ExternalBaseAggregateTAE.xml
AU ctakes-smoking-status/desc/analysis_engine/SimulatedProdSmokingTAE.xml
AU ctakes-smoking-status/desc/analysis_engine/ClassifiableEntriesAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/KuRuleBasedClassifierAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/NonsmokerDictionaryLookupAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/ProductionPostSentenceAggregate_step2_libsvm.xml
AU ctakes-smoking-status/desc/analysis_engine/SmokingStatusDictionaryLookupAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/ArtificialSentenceAnnotator.xml
AU ctakes-smoking-status/desc/analysis_engine/ProductionPostSentenceAggregate_step1.xml
AU ctakes-smoking-status/desc/analysis_engine/Sentence.xml
AU ctakes-smoking-status/desc/analysis_engine/ExternalBaseAggregateTAE_CDA.xml
AU ctakes-smoking-status/desc/analysis_engine/SimulatedProdSmokingTAE_CDA.xml
AU ctakes-smoking-status/desc/analysis_engine/SentenceAdjuster.xml
AU ctakes-smoking-status/desc/analysis_engine/ResolutionAnnotator.xml
U .
At revision 1814764
Parsing POMs
Established TCP socket on 46348
maven35-agent.jar already up to date
maven35-interceptor.jar already up to date
maven3-interceptor-commons.jar already up to date
[ctakes-trunk-Java-1.9] $ /home/jenkins/tools/java/latest1.9/bin/java -Xmx4g -Xms256m -Dmaven.test.failure.ignore=false -cp /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging jenkins.maven3.agent.Maven35Main /home/jenkins/tools/maven/apache-maven-3.5.0 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven35-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 46348
ERROR: Failed to parse POMs
java.io.IOException: Cannot run program "/home/jenkins/tools/java/latest1.9/bin/java" (in directory "<https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/")>: error=2, No such file or directory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
at ......remote call to ubuntu-eu3(Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.Launcher$RemoteLauncher.launch(Launcher.java:1053)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:278)
at hudson.maven.ProcessCache.get(ProcessCache.java:236)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:804)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.io.IOException: error=2, No such file or directory
at java.lang.UNIXProcess.forkAndExec(Native Method)
at java.lang.UNIXProcess.<init>(UNIXProcess.java:247)
at java.lang.ProcessImpl.start(ProcessImpl.java:134)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
Build failed in Jenkins: ctakes-trunk-Java-1.9 #18
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/18/display/redirect?page=changes>
Changes:
[seanfinan] FileTreeReader : Allow specification of a single file
------------------------------------------
[...truncated 970.54 KB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.708 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 7.535 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.816 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 9.425 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 5.496 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 26.274 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.360 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.396 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 5.935 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.461 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.900 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.305 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 11.477 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.021 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.319 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 18.993 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.489 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.591 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 4.963 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 5.022 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.753 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 8.054 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.132 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.733 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.924 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.645 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.317 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.721 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 37.616 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.004 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.625 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.680 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 10.906 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:47 min]
[INFO] Apache cTAKES CoReference Resolver ................. FAILURE [ 8.631 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.786 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.755 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.779 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.018 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.905 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.304 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.780 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.691 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.821 s]
[INFO] ctakes-examples .................................... SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.681 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.471 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:20 min
[INFO] Finished at: 2017-11-09T16:19:07Z
[INFO] Final Memory: 76M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 42928](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #17
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/17/display/redirect>
------------------------------------------
[...truncated 1.00 MB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.697 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.152 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.982 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 9.300 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.697 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 25.088 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.087 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.348 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.313 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.538 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.079 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.395 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 16.425 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.159 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.215 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 34.998 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 20.258 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.727 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.665 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.931 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.802 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.462 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.368 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.948 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 4.186 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.782 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.294 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.728 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 34.468 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.263 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.850 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.132 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 11.467 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:39 min]
[INFO] Apache cTAKES CoReference Resolver ................. FAILURE [ 7.281 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 3.021 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.374 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.919 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.889 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.917 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 6.869 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.885 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.919 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.936 s]
[INFO] ctakes-examples .................................... SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.698 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.654 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:05 min
[INFO] Finished at: 2017-11-08T17:21:13Z
[INFO] Final Memory: 70M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 33883](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #16
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/16/display/redirect>
------------------------------------------
Started by an SCM change
ERROR: Issue with creating launcher for agent ubuntu-4. The agent is being disconnected
[EnvInject] - Loading node environment variables.
ERROR: SEVERE ERROR occurs
org.jenkinsci.lib.envinject.EnvInjectException: hudson.remoting.ChannelClosedException: channel is already closed
at org.jenkinsci.plugins.envinject.service.EnvironmentVariablesNodeLoader.gatherEnvVarsForNode(EnvironmentVariablesNodeLoader.java:95)
at org.jenkinsci.plugins.envinject.EnvInjectListener.loadEnvironmentVariablesNode(EnvInjectListener.java:80)
at org.jenkinsci.plugins.envinject.EnvInjectListener.setUpEnvironment(EnvInjectListener.java:44)
at hudson.model.AbstractBuild$AbstractBuildExecution.createLauncher(AbstractBuild.java:534)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:454)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: hudson.remoting.ChannelClosedException: channel is already closed
at hudson.remoting.Channel.send(Channel.java:613)
at hudson.remoting.Request.call(Request.java:130)
at hudson.remoting.Channel.call(Channel.java:838)
at hudson.FilePath.act(FilePath.java:1082)
at org.jenkinsci.plugins.envinject.service.EnvironmentVariablesNodeLoader.gatherEnvVarsForNode(EnvironmentVariablesNodeLoader.java:64)
... 8 more
Caused by: java.io.IOException
at hudson.remoting.Channel.close(Channel.java:1301)
at hudson.slaves.ChannelPinger$1.onDead(ChannelPinger.java:180)
at hudson.remoting.PingThread.ping(PingThread.java:130)
at hudson.remoting.PingThread.run(PingThread.java:86)
Caused by: java.util.concurrent.TimeoutException: Ping started at 1510144865058 hasn't completed by 1510145106242
... 2 more
[EnvInject] - [ERROR] - SEVERE ERROR occurs: channel is already closed
Build failed in Jenkins: ctakes-trunk-Java-1.9 #15
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/15/display/redirect?page=changes>
Changes:
[alexz] CTAKES-465: fix deprecated FileLocator.getFullPath
------------------------------------------
[...truncated 983.28 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.434 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.732 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.769 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.494 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 5.262 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 26.261 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.837 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.494 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 7.561 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.724 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.398 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.213 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 13.081 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.104 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.663 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 23.528 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.332 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.541 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 6.069 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 5.162 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.625 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.629 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.019 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.875 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.503 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.690 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.028 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 20.175 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 39.735 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.400 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.520 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 8.076 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.789 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:46 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.247 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.680 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.872 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.636 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.009 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.631 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.112 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.610 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.112 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.851 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.718 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.479 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.576 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:00 min
[INFO] Finished at: 2017-10-31T00:28:12Z
[INFO] Final Memory: 80M/266M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 56713](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #14
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/14/display/redirect?page=changes>
Changes:
[alexz] CTAKES-463: update deprecated FileLocator.locateFile with FileLocator.getFile
------------------------------------------
[...truncated 984.58 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.728 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.572 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.683 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.375 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 5.056 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 25.840 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 4.974 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.298 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.174 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.341 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.781 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.116 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 11.853 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 5.053 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.248 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 22.871 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.324 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 3.203 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.211 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.747 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.511 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.360 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 2.989 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.629 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.365 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.775 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.109 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 19.483 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 40.227 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.991 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.469 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 18.969 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 11.440 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:53 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.211 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.750 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.042 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.573 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.946 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.632 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.038 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.594 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.443 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.557 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.853 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.532 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.475 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:10 min
[INFO] Finished at: 2017-10-30T02:19:20Z
[INFO] Final Memory: 66M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 46807](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #13
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/13/display/redirect?page=changes>
Changes:
[seanfinan] Keep lookup fast-res in distributable
[seanfinan] include piper files
[seanfinan] uimaj-tools is needed for the uima cpe and cvd gui profiles
------------------------------------------
[...truncated 992.75 KB...]
[INFO] ctakes-examples .................................... SUCCESS [ 10.136 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 1.465 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 1.637 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:30 min
[INFO] Finished at: 2017-10-26T17:38:23Z
[INFO] Final Memory: 69M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org sean.finan@tch.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 40447](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #12
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/12/display/redirect?page=changes>
Changes:
[seanfinan] Allow comma-separated semantic group codes in blacklist files.
[seanfinan] Change from deprecated FileLocator.locateFile(..) to getFile(..)
Remove use of deprecated getCasInitializer()
[seanfinan] CTAKES-470 : throw exception (and exit) if piper cannot be loaded. Exceptions saved to log file.
------------------------------------------
[...truncated 318.76 KB...]
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/SRLSharedParserModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/DependencySharedModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/SRLSharedModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/SRLSharedPredictionModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/SRLSharedRoleModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/shared/LemmatizerSharedModel.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/ClearDependencyUtility.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/DependencyRegex.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/Delim.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/DependencyPath.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/DependencyUtility.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/AnnotationDepUtils.java
A ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/SRLUtility.java
A ctakes-dependency-parser/src/main/java/META-INF
A ctakes-dependency-parser/src/main/java/META-INF/org.apache.uima.fit
A ctakes-dependency-parser/src/main/java/META-INF/org.apache.uima.fit/types.txt
A ctakes-dependency-parser/src/test
A ctakes-dependency-parser/src/test/java
A ctakes-dependency-parser/src/test/java/org
A ctakes-dependency-parser/src/test/java/org/apache
A ctakes-dependency-parser/src/test/java/org/apache/ctakes
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser/ae
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser/ae/util
A ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser/ae/util/TestClearNLPAnalysisEngines.java
A ctakes-dependency-parser/pom.xml
A ctakes-dependency-parser/resources
A ctakes-temporal-res
A ctakes-temporal-res/LICENSE
A ctakes-temporal-res/src
A ctakes-temporal-res/src/test
A ctakes-temporal-res/src/main
A ctakes-temporal-res/src/main/resources
A ctakes-temporal-res/src/main/resources/eventDict.txt
A ctakes-temporal-res/src/main/resources/org
A ctakes-temporal-res/src/main/resources/org/apache
A ctakes-temporal-res/src/main/resources/org/apache/ctakes
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/doctimerel
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/doctimerel/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventannotator
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventannotator/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/contextualmodality
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/contextualmodality/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime/model.jar
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime/Event_Time_with_UMLS_filter.txt
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime/Event_Time_no_UMLS_filter.txt
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventtime/READEME.txt
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventevent
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventevent/Event_Event_UMLS_doubleFilter_useSystemEvents.txt
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventevent/model.jar
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/eventevent/READEME.txt
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/salience
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/salience/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/section
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/section/ccda_sections.txt
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/timeannotator
AU ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/ae/timeannotator/model.jar
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/pipeline
A ctakes-temporal-res/src/main/resources/org/apache/ctakes/temporal/pipeline/TemporalSubPipe.piper
A ctakes-temporal-res/pom.xml
A LICENSE
A ctakes-drug-ner-res
A ctakes-drug-ner-res/pom.xml
A ctakes-drug-ner-res/LICENSE
A ctakes-drug-ner-res/src
A ctakes-drug-ner-res/src/test
A ctakes-drug-ner-res/src/main
A ctakes-drug-ner-res/src/main/resources
A ctakes-drug-ner-res/src/main/resources/org
A ctakes-drug-ner-res/src/main/resources/org/apache
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/tokenizer
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/tokenizer/hyphen_freq.txt
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/types
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/types/TypeSystem.xml
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/lookup
A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/lookup/LookupDesc_DrugNER.xml
A ctakes-gui-res
A ctakes-gui-res/src
A ctakes-gui-res/src/test
A ctakes-gui-res/src/test/java
A ctakes-gui-res/src/main
A ctakes-gui-res/src/main/resources
A ctakes-gui-res/src/main/resources/org
A ctakes-gui-res/src/main/resources/org/apache
A ctakes-gui-res/src/main/resources/org/apache/ctakes
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/UnwantedSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/CtakesSnomedTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/RightAbbreviations.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/RemovalColonTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/ConversionSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/RemovalPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/ModifierSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/UnwantedPrefixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/CtakesSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/CtakesDrugTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/small/RemovalSuffixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RightAbbreviations.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RemovalColonTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/emptyAnatTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/ConversionSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RemovalPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/TimNonDrugSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/ModifierSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/UnwantedPrefixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/TimDrugTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/TimOtherTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RemovalSuffixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/RemovalFunctionTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/UnwantedSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tim/TimSpecificTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RemovalColonTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/KeepPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/UnwantedCuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/ModifierSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/UnwantedTexts.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/CtakesSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RemovalFunctionTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/CtakesAnatTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/CtakesSnomedTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RightAbbreviations.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/ConversionSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RemovalPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/UnwantedPrefixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/CtakesDrugTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/RemovalSuffixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/tiny/UnwantedSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/CtakesDrugTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RemovalSuffixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RemovalFunctionTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/UnwantedSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/CtakesSnomedTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RightAbbreviations.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RemovalColonTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/ConversionSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/RemovalPrefixTriggers.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/ModifierSuffixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/UnwantedPrefixes.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/default/CtakesSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesFindTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesAnatTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesProcTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesAllTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/UmlsAllSources.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/CtakesDisoTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/dictionary/data/optional/UmlsAllTuis.txt
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline
A ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Package.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/blueup.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Help_32.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/SavePiper.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/PlusMark.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BlueRightArrow.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/OpenPiper.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/CheckRun.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/GreenArrowIn.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Help_48.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Parameters.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/RunPiper.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/FindOnPc_48.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Utilities.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/PiperFile.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/bluedown.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BlueGearYellowGear.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Folder_Blue.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BoxOfStuff.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BlueGear.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/redcircleno.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/RunReady.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/NewPiper.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/Write.png
AU ctakes-gui-res/src/main/resources/org/apache/ctakes/gui/pipeline/icon/BlueArrowOut.png
A ctakes-gui-res/pom.xml
U .
At revision 1813319
Parsing POMs
Downloaded artifact http://repo.maven.apache.org/maven2/org/cleartk/cleartk/2.0.0/cleartk-2.0.0.pom
Established TCP socket on 43989
maven35-agent.jar already up to date
maven35-interceptor.jar already up to date
maven3-interceptor-commons.jar already up to date
[ctakes-trunk-Java-1.9] $ /home/jenkins/tools/java/latest1.9/bin/java -Xmx4g -Xms256m -Dmaven.test.failure.ignore=false -cp /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging jenkins.maven3.agent.Maven35Main /home/jenkins/tools/maven/apache-maven-3.5.0 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven35-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 43989
ERROR: Failed to parse POMs
java.io.IOException: Cannot run program "/home/jenkins/tools/java/latest1.9/bin/java" (in directory "<https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/")>: error=2, No such file or directory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
at ......remote call to H26(Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.Launcher$RemoteLauncher.launch(Launcher.java:1053)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:278)
at hudson.maven.ProcessCache.get(ProcessCache.java:236)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:804)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.io.IOException: error=2, No such file or directory
at java.lang.UNIXProcess.forkAndExec(Native Method)
at java.lang.UNIXProcess.<init>(UNIXProcess.java:247)
at java.lang.ProcessImpl.start(ProcessImpl.java:134)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
Build failed in Jenkins: ctakes-trunk-Java-1.9 #11
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/11/display/redirect?page=changes>
Changes:
[seanfinan] Set document count in patient note store
[seanfinan] patient store, etc. use total doc count instead of previous/next
------------------------------------------
[...truncated 991.51 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 16.990 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 17.460 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 4.968 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.766 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 16.154 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 35.823 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.694 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 15.137 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 8.773 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.839 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.087 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.159 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 18.566 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.905 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 6.896 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 41.779 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.693 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.646 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.020 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.841 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 16.398 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.283 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.369 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.938 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 13.896 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.642 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.264 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 29.773 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 54.547 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.645 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.577 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.349 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 53.265 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:08 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.050 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 12.614 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.005 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 14.178 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.864 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 3.012 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 16.168 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.733 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 25.431 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 49.068 s]
[INFO] ctakes-examples .................................... SUCCESS [ 46.710 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 31.003 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 32.837 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 18:53 min
[INFO] Finished at: 2017-10-24T21:18:09Z
[INFO] Final Memory: 69M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 42079](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #10
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/10/display/redirect?page=changes>
Changes:
[seanfinan] Add patient identifier get()
[seanfinan] Add text patientIdentifier to metadata type
------------------------------------------
[...truncated 995.01 KB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 15.129 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 2.969 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 1.249 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 5.477 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 2.872 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 21.139 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 2.795 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 1.598 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 3.536 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 1.532 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 2.049 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 2.019 s]
[JENKINS] Archiving disabled
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 28.079 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 2.762 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 3.144 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 50.687 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 3.094 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 13.123 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 3.118 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 3.081 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 1.748 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 5.166 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 1.772 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 1.203 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.036 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 1.864 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 2.885 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 20.775 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 32.030 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 30.750 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 18.443 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 32.896 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 45.730 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [02:31 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [01:07 min]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 34.141 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 54.129 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 49.555 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 30.763 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 17.096 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [01:04 min]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 29.858 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 50.589 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 45.791 s]
[INFO] ctakes-examples .................................... SUCCESS [01:02 min]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 30.649 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 52.023 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 26:55 min
[INFO] Finished at: 2017-10-24T04:11:05Z
[INFO] Final Memory: 71M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 59827](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #9
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/9/display/redirect?page=changes>
Changes:
[tmill] Added some debugging statements for cross-document coref.
------------------------------------------
[...truncated 1.03 MB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.687 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.762 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.573 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.234 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.535 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 23.850 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.666 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 2.978 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 5.563 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.200 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.776 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.837 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 25.962 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.688 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 4.824 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 40.897 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 16.138 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.646 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 4.962 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.805 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.672 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.058 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.117 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.563 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 4.567 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.406 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 3.889 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.225 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 32.549 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.909 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.435 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 6.637 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 10.453 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:35 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 9.715 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.609 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.060 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.624 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.371 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.651 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 6.610 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.638 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.669 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.506 s]
[INFO] ctakes-examples .................................... SUCCESS [ 8.642 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.490 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.844 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:01 min
[INFO] Finished at: 2017-10-17T22:31:34Z
[INFO] Final Memory: 73M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 39947](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #8
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/8/display/redirect?page=changes>
Changes:
[james-masanz] remove outdated URL reference
------------------------------------------
[...truncated 994.71 KB...]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.573 s]
[INFO] ctakes-examples .................................... SUCCESS [ 9.903 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 3.629 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 3.206 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:06 min
[INFO] Finished at: 2017-10-05T15:18:53Z
[INFO] Final Memory: 70M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org timothy.miller@childrens.harvard.edu
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org james-masanz@apache.org
Sending e-mails to: notifications@ctakes.apache.org
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 45731](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #7
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/7/display/redirect?page=changes>
Changes:
[tmill] Remove debugging statement that is way too verbose.
------------------------------------------
[...truncated 322.92 KB...]
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae/ContextDependentTokenizerAnnotator.java
A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/context
A ctakes-context-tokenizer/data
A ctakes-context-tokenizer/data/test
A ctakes-context-tokenizer/data/test/output
A ctakes-context-tokenizer/pom.xml
A ctakes-context-tokenizer/resources
A ctakes-context-tokenizer/resources/launch
A ctakes-context-tokenizer/README
A ctakes-context-tokenizer/desc
A ctakes-context-tokenizer/desc/analysis_engine
A ctakes-context-tokenizer/desc/analysis_engine/TestTAE.xml
A ctakes-context-tokenizer/desc/analysis_engine/AggregateAE.xml
A ctakes-context-tokenizer/desc/analysis_engine/ContextDependentTokenizerAnnotator.xml
A ctakes-dictionary-lookup-fast-res
AU ctakes-dictionary-lookup-fast-res/LICENSE
A ctakes-dictionary-lookup-fast-res/src
A ctakes-dictionary-lookup-fast-res/src/main
A ctakes-dictionary-lookup-fast-res/src/main/resources
A ctakes-dictionary-lookup-fast-res/src/main/resources/org
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/custom_cui_bsv.bsv
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/custom_cui_tui_bsv.bsv
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/custom_tui_bsv.bsv
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/custom_mixed_bsv.bsv
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/CustomCuiBsv.xml
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/CustomCuiTuiBsv.xml
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/CustomCuiTui2Bsv.xml
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/pipeline
A ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/pipeline/DictionarySubPipe.piper
AU ctakes-dictionary-lookup-fast-res/pom.xml
A ctakes-ne-contexts-res
A ctakes-ne-contexts-res/LICENSE
A ctakes-ne-contexts-res/src
A ctakes-ne-contexts-res/src/test
A ctakes-ne-contexts-res/src/main
A ctakes-ne-contexts-res/src/main/resources
A ctakes-ne-contexts-res/src/main/resources/org
A ctakes-ne-contexts-res/src/main/resources/org/apache
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline/NeContextsSubPipe.piper
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc
A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc/NegationAnnotator.xml
A ctakes-ne-contexts-res/pom.xml
A ctakes-dependency-parser-res
A ctakes-dependency-parser-res/LICENSE
A ctakes-dependency-parser-res/src
A ctakes-dependency-parser-res/src/main
A ctakes-dependency-parser-res/src/main/resources
A ctakes-dependency-parser-res/src/main/resources/org
A ctakes-dependency-parser-res/src/main/resources/org/apache
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred/mayo-en-pred-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/README
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/mayo-en-dep-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/mayo-en-srl-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/README
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/clearparser_models.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role/mayo-en-role-1.3.0.jar
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer
A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/README
AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/dictionary-1.3.1.jar
A ctakes-dependency-parser-res/src/test
A ctakes-dependency-parser-res/pom.xml
A ctakes-chunker
A ctakes-chunker/README
A ctakes-chunker/ExampleTrainChunker.bat
A ctakes-chunker/desc
A ctakes-chunker/desc/POSTagger.xml
A ctakes-chunker/desc/AggregateAE.xml
A ctakes-chunker/desc/collection_processing_engine
A ctakes-chunker/desc/Chunker.xml
A ctakes-chunker/desc/test
A ctakes-chunker/desc/test/ChunkerCPE.xml
A ctakes-chunker/desc/test/POSTagger.xml
A ctakes-chunker/desc/test/PhraseTypeChunkerAggregate.xml
A ctakes-chunker/desc/test/Chunker.xml
A ctakes-chunker/desc/test/TokenizerAnnotator.xml
A ctakes-chunker/desc/test/ChunkAdjusterAggregate.xml
A ctakes-chunker/desc/test/ChunkerCpeUsingPosTagDictionary.xml
A ctakes-chunker/desc/test/SimpleSegmentAnnotator.xml
A ctakes-chunker/desc/test/AdjustNounPhraseToIncludeFollowingPPNP.xml
A ctakes-chunker/desc/test/ChunkerAggregate.xml
A ctakes-chunker/desc/SimpleSegmentAnnotator.xml
A ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingNP.xml
A ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingPPNP.xml
A ctakes-chunker/desc/AdjustOPhraseToIncludeFollowingO.xml
A ctakes-chunker/desc/ChunkerAggregate.xml
A ctakes-chunker/desc/ChunkerCPE.xml
A ctakes-chunker/desc/analysis_engine
A ctakes-chunker/desc/ChunkAdjuster.xml
A ctakes-chunker/LICENSE
A ctakes-chunker/scripts
A ctakes-chunker/scripts/java
A ctakes-chunker/scripts/java/data
A ctakes-chunker/scripts/java/data/chunk
A ctakes-chunker/scripts/java/data/chunk/genia
A ctakes-chunker/scripts/java/data/chunk/genia/Genia2PTB.java
A ctakes-chunker/scripts/java/data/chunk/Chunklink2OpenNLP.java
A ctakes-chunker/scripts/perl
A ctakes-chunker/scripts/perl/README
A ctakes-chunker/scripts/groovy
A ctakes-chunker/scripts/groovy/data
A ctakes-chunker/scripts/groovy/data/chunk
A ctakes-chunker/scripts/groovy/data/chunk/TagReport.groovy
A ctakes-chunker/src
A ctakes-chunker/src/main
A ctakes-chunker/src/main/java
A ctakes-chunker/src/main/java/org
A ctakes-chunker/src/main/java/org/apache
A ctakes-chunker/src/main/java/org/apache/ctakes
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/ChunkCreator.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/DefaultChunkCreator.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/PhraseTypeChunkCreator.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/Chunker.java
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster
A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster/ChunkAdjuster.java
A ctakes-chunker/src/test
A ctakes-chunker/src/test/java
A ctakes-chunker/src/test/java/org
A ctakes-chunker/src/test/java/org/apache
A ctakes-chunker/src/test/java/org/apache/ctakes
A ctakes-chunker/src/test/java/org/apache/ctakes/chunker
A ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkAdjusterTests.java
A ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkerTests.java
A ctakes-chunker/src/test/resources
A ctakes-chunker/src/test/resources/data
A ctakes-chunker/src/test/resources/data/README
A ctakes-chunker/src/test/resources/data/output
A ctakes-chunker/src/test/resources/data/output/text1.txt.included.used.tag-dictionary.xml
A ctakes-chunker/src/test/resources/data/output/NotesIIST_RTF.DTD
A ctakes-chunker/src/test/resources/data/output/text1.txt.included.xml
A ctakes-chunker/src/test/resources/data/unit-test.opennlp.chunks
A ctakes-chunker/src/test/resources/data/text-files
A ctakes-chunker/src/test/resources/data/text-files/text1.txt
A ctakes-chunker/data
A ctakes-chunker/data/treebank
A ctakes-chunker/data/treebank/genia
A ctakes-chunker/data/treebank/genia/README
A ctakes-chunker/data/treebank/genia/names-00.txt
A ctakes-chunker/data/treebank/genia/00
A ctakes-chunker/data/treebank/genia/names-01.txt
A ctakes-chunker/data/treebank/genia/01
A ctakes-chunker/data/chunk
A ctakes-chunker/data/chunk/genia
A ctakes-chunker/data/chunk/genia/README
A ctakes-chunker/data/chunk/genia/genia.opennlp.chunks
A ctakes-chunker/data/chunk/combinations
A ctakes-chunker/data/chunk/ptb
A ctakes-chunker/data/chunk/ptb/README
A ctakes-chunker/pom.xml
A ctakes-chunker/resources
A ctakes-chunker/resources/launch
AU ctakes-chunker/resources/launch/UIMA_CPE_GUI--chunker.launch
AU ctakes-chunker/resources/launch/ChunkAdjusterTests.launch
AU ctakes-chunker/resources/launch/chunker.launch
A ctakes-pos-tagger-res
A ctakes-pos-tagger-res/LICENSE
A ctakes-pos-tagger-res/src
A ctakes-pos-tagger-res/src/test
A ctakes-pos-tagger-res/src/main
A ctakes-pos-tagger-res/src/main/resources
A ctakes-pos-tagger-res/src/main/resources/org
A ctakes-pos-tagger-res/src/main/resources/org/apache
A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes
A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger
A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models
A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/clearnlp
AU ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/clearnlp/mayo-en-pos-1.3.0.jar
AU ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/mayo-pos.zip
A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/README
A ctakes-pos-tagger-res/pom.xml
AU KEYS
U .
At revision 1811014
Parsing POMs
Established TCP socket on 33489
maven35-agent.jar already up to date
maven35-interceptor.jar already up to date
maven3-interceptor-commons.jar already up to date
[ctakes-trunk-Java-1.9] $ /home/jenkins/tools/java/latest1.9/bin/java -Xmx4g -Xms256m -Dmaven.test.failure.ignore=false -cp /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging jenkins.maven3.agent.Maven35Main /home/jenkins/tools/maven/apache-maven-3.5.0 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven35-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 33489
ERROR: Failed to parse POMs
java.io.IOException: Cannot run program "/home/jenkins/tools/java/latest1.9/bin/java" (in directory "<https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/")>: error=2, No such file or directory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
at ......remote call to ubuntu-eu3(Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.Launcher$RemoteLauncher.launch(Launcher.java:1053)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:278)
at hudson.maven.ProcessCache.get(ProcessCache.java:236)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:804)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.io.IOException: error=2, No such file or directory
at java.lang.UNIXProcess.forkAndExec(Native Method)
at java.lang.UNIXProcess.<init>(UNIXProcess.java:247)
at java.lang.ProcessImpl.start(ProcessImpl.java:134)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
at hudson.Proc$LocalProc.<init>(Proc.java:249)
at hudson.Proc$LocalProc.<init>(Proc.java:218)
at hudson.Launcher$LocalLauncher.launch(Launcher.java:930)
at hudson.Launcher$ProcStarter.start(Launcher.java:450)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299)
at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
Build failed in Jenkins: ctakes-trunk-Java-1.9 #6
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/6/display/redirect?page=changes>
Changes:
[seanfinan] ConstituencyParser add dot logging since initialization can take several seconds
TreeUtils added getTerminals(..) that accepts BaseTokens
MaxEntParserWrapper use uimafit index map instead of double select for speed
MarkableSalienceAnnotator added start, finish logging
MentionCluster.. added start, finish logging; still waiting on notYetProcess(jCas)
------------------------------------------
[...truncated 990.56 KB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 6.455 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.619 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.799 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 10.926 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 5.222 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 27.574 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.304 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.213 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.301 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.270 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 4.206 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.031 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 11.593 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.669 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.262 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 20.410 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.219 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.461 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.216 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.973 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.901 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.744 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.650 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.854 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.590 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.636 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.118 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 20.031 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 40.678 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 7.168 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 3.123 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.474 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 12.043 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:47 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.648 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.758 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.973 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.763 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.063 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 3.046 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.386 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.920 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.410 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 3.012 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.369 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.614 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.462 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:00 min
[INFO] Finished at: 2017-10-02T21:19:02Z
[INFO] Final Memory: 73M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 36347](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #5
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/5/display/redirect?page=changes>
Changes:
[tmill] Fixes CTAKES-459; moves ctakes-coreference test from src/main to src/test.
------------------------------------------
[...truncated 1.01 MB...]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.967 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 5.300 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.767 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 8.861 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.419 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 23.525 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 4.729 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.296 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.257 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.229 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.721 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 15.319 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 18.801 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.878 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.261 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 48.786 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 6.101 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 5.704 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 4.917 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.756 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.582 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.179 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.009 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.704 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 5.191 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.540 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.129 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 18.639 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 34.562 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.863 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.650 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.096 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 10.822 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:36 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 9.663 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.723 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 7.378 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.726 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 6.333 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.714 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.054 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.736 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.573 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.571 s]
[INFO] ctakes-examples .................................... SUCCESS [ 8.784 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.561 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 5.926 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:14 min
[INFO] Finished at: 2017-10-02T15:19:15Z
[INFO] Final Memory: 72M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 41866](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped
Build failed in Jenkins: ctakes-trunk-Java-1.9 #4
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/4/display/redirect?page=changes>
Changes:
[james-masanz] CTAKES-445 - improvement but not complete fix.
------------------------------------------
[...truncated 989.27 KB...]
[INFO] Reactor Summary:
[INFO]
[INFO] Apache cTAKES ...................................... SUCCESS [ 5.560 s]
[INFO] ctakes-gui-res ..................................... SUCCESS [ 4.573 s]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 2.749 s]
[INFO] Apache cTAKES common type system ................... SUCCESS [ 8.688 s]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 4.555 s]
[INFO] Apache cTAKES core ................................. SUCCESS [ 28.395 s]
[INFO] ctakes-gui ......................................... SUCCESS [ 5.930 s]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [ 3.371 s]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [ 6.310 s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [ 3.230 s]
[INFO] Apache cTAKES chunker .............................. SUCCESS [ 3.958 s]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [ 4.099 s]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [ 11.392 s]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [ 4.899 s]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [ 5.288 s]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [ 18.220 s]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 5.224 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [ 2.533 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 5.030 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [ 4.634 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [ 3.769 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 6.262 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [ 3.092 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [ 2.590 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [ 3.254 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 3.716 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [ 4.062 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 20.019 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 39.832 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [ 6.611 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [ 2.456 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [ 7.398 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [ 11.726 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... SUCCESS [01:50 min]
[INFO] Apache cTAKES CoReference Resolver ................. SUCCESS [ 11.221 s]
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 2.775 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 8.012 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 2.756 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 7.256 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [ 2.679 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [ 7.281 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [ 2.615 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [ 3.203 s]
[INFO] ctakes-examples-res ................................ SUCCESS [ 2.509 s]
[INFO] ctakes-examples .................................... SUCCESS [ 10.189 s]
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [ 2.584 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [ 2.115 s]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... SKIPPED
[INFO] Apache cTAKES template filler ...................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 08:48 min
[INFO] Finished at: 2017-10-01T19:19:27Z
[INFO] Final Memory: 68M/256M
[INFO] ------------------------------------------------------------------------
java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.base/java.lang.Class.getConstructor0(Class.java:3315)
at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
Sending e-mails to: notifications@ctakes.apache.org
ERROR: Failed to parse POMs
java.io.IOException: java.lang.reflect.InvocationTargetException
at hudson.maven.Maven3Builder.call(Maven3Builder.java:179)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
at ......remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms256m, -Dmaven.test.failure.ignore=false, -cp, /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging, jenkins.maven3.agent.Maven35Main, /home/jenkins/tools/maven/apache-maven-3.5.0, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven35-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 34317](Native Method)
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554)
at hudson.remoting.UserResponse.retrieve(UserRequest.java:281)
at hudson.remoting.Channel.call(Channel.java:839)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496)
at hudson.model.Run.execute(Run.java:1737)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:419)
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:139)
at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
at hudson.remoting.UserRequest.perform(UserRequest.java:181)
at hudson.remoting.UserRequest.perform(UserRequest.java:52)
at hudson.remoting.Request$2.run(Request.java:336)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.Exception: java.lang.reflect.InvocationTargetException
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:179)
... 14 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at jenkins.maven3.agent.Maven35Main.launch(Maven35Main.java:176)
... 14 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(BGMBuilder.java:147)
at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(BGMBuilder.java:117)
at com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
at com.sun.tools.xjc.Driver.run(Driver.java:333)
at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(AbstractXjcMojo.java:316)
at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:208)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:154)
at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:146)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)
at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)
at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:309)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:194)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:107)
at org.jvnet.hudson.maven3.launcher.Maven35Launcher.main(Maven35Launcher.java:130)
... 21 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 40 more
Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
at com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(BindingComponent.java:65)
at com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
at com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
... 45 more
Caused by: java.lang.reflect.InvocationTargetException
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
... 48 more
Caused by: java.lang.NoClassDefFoundError: javax/activation/MimeTypeParseException
at java.lang.Class.getDeclaredConstructors0(Native Method)
at java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
at java.lang.Class.getConstructor0(Class.java:3315)
at java.lang.Class.getDeclaredConstructor(Class.java:2510)
at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
at com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<init>(DefaultClassBinder.java:98)
at com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>(ClassSelector.java:214)
... 53 more
Caused by: java.lang.ClassNotFoundException: javax.activation.MimeTypeParseException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:247)
at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:239)
... 60 more
channel stopped