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Posted to commits@cassandra.apache.org by "Pavel Yaskevich (JIRA)" <ji...@apache.org> on 2014/12/13 01:27:13 UTC
[jira] [Created] (CASSANDRA-8476) RE in writeSortedContents or
replaceFlushed blocks compaction threads indefinitely.
Pavel Yaskevich created CASSANDRA-8476:
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Summary: RE in writeSortedContents or replaceFlushed blocks compaction threads indefinitely.
Key: CASSANDRA-8476
URL: https://issues.apache.org/jira/browse/CASSANDRA-8476
Project: Cassandra
Issue Type: Bug
Components: Core
Reporter: Pavel Yaskevich
Assignee: Pavel Yaskevich
Fix For: 2.0.12
Encountered this problem while generating some test data, incremental backup failed to create hard-links to some of the of the system files (which is done at the end of each compaction):
Example of the RE stacktrace:
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14/12/12 15:47:47 ERROR cassandra.SchemaLoader: Fatal exception in thread Thread[FlushWriter:5,5,main]
java.lang.RuntimeException: Tried to create duplicate hard link to <path>/cassandra/data/system/IndexInfo/backups/system-IndexInfo-jb-1-Index.db
at org.apache.cassandra.io.util.FileUtils.createHardLink(FileUtils.java:75)
at org.apache.cassandra.io.sstable.SSTableReader.createLinks(SSTableReader.java:1222)
at org.apache.cassandra.db.DataTracker.maybeIncrementallyBackup(DataTracker.java:189)
at org.apache.cassandra.db.DataTracker.replaceFlushed(DataTracker.java:166)
at org.apache.cassandra.db.compaction.AbstractCompactionStrategy.replaceFlushed(AbstractCompactionStrategy.java:231)
at org.apache.cassandra.db.ColumnFamilyStore.replaceFlushed(ColumnFamilyStore.java:1141)
at org.apache.cassandra.db.Memtable$FlushRunnable.runWith(Memtable.java:343)
at org.apache.cassandra.io.util.DiskAwareRunnable.runMayThrow(DiskAwareRunnable.java:48)
at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:744)
14
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jstack shows that CompactionExecutor threads are now blocked waiting on the flush future which will actually never decrement a latch.
{noformat}
"CompactionExecutor:125" daemon prio=5 tid=0x00007fb3a10da800 nid=0x13c43 waiting on condition [0x000000012a900000]
java.lang.Thread.State: WAITING (parking)
at sun.misc.Unsafe.park(Native Method)
- parking to wait for <0x000000071b669088> (a java.util.concurrent.FutureTask)
at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186)
at java.util.concurrent.FutureTask.awaitDone(FutureTask.java:425)
at java.util.concurrent.FutureTask.get(FutureTask.java:187)
at org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:409)
at org.apache.cassandra.db.SystemKeyspace.forceBlockingFlush(SystemKeyspace.java:457)
at org.apache.cassandra.db.SystemKeyspace.finishCompaction(SystemKeyspace.java:203)
at org.apache.cassandra.db.compaction.CompactionTask.runWith(CompactionTask.java:225)
at org.apache.cassandra.io.util.DiskAwareRunnable.runMayThrow(DiskAwareRunnable.java:48)
at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28)
at org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:60)
at org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:59)
at org.apache.cassandra.db.compaction.CompactionManager$BackgroundCompactionTask.run(CompactionManager.java:198)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:744)
"CompactionExecutor:124" daemon prio=5 tid=0x00007fb35cc09800 nid=0x13a2b waiting on condition [0x000000012934f000]
java.lang.Thread.State: WAITING (parking)
at sun.misc.Unsafe.park(Native Method)
- parking to wait for <0x00000007ce4bf918> (a java.util.concurrent.FutureTask)
at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186)
at java.util.concurrent.FutureTask.awaitDone(FutureTask.java:425)
at java.util.concurrent.FutureTask.get(FutureTask.java:187)
at org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:409)
at org.apache.cassandra.db.SystemKeyspace.forceBlockingFlush(SystemKeyspace.java:457)
at org.apache.cassandra.db.SystemKeyspace.finishCompaction(SystemKeyspace.java:203)
at org.apache.cassandra.db.compaction.CompactionTask.runWith(CompactionTask.java:225)
at org.apache.cassandra.io.util.DiskAwareRunnable.runMayThrow(DiskAwareRunnable.java:48)
at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28)
at org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:60)
at org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:59)
at org.apache.cassandra.db.compaction.CompactionManager$BackgroundCompactionTask.run(CompactionManager.java:198)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:744)
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