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Posted to reviews@spark.apache.org by kiszk <gi...@git.apache.org> on 2018/02/19 09:11:19 UTC
[GitHub] spark pull request #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferH...
GitHub user kiszk opened a pull request:
https://github.com/apache/spark/pull/20636
[SPARK-23415][SQL][TEST] Make behavior of BufferHolderSparkSubmitSuite correct and stable
## What changes were proposed in this pull request?
This PR addresses two issues in `BufferHolderSparkSubmitSuite`.
1. While `BufferHolderSparkSubmitSuite` tried to allocate a large object several times, it actually allocated an object once and reused the object.
2. `BufferHolderSparkSubmitSuite` may fail due to timeout
To assign a small object before allocating a large object each time solved issue 1 by avoiding reuse.
To increasing heap size from 4g to 7g **probably** solved issue 2. It can also avoid OOM after fixing issue 1.
## How was this patch tested?
Updated existing `BufferHolderSparkSubmitSuite`
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/kiszk/spark SPARK-23415
Alternatively you can review and apply these changes as the patch at:
https://github.com/apache/spark/pull/20636.patch
To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:
This closes #20636
----
commit 39a715c52ac4055b3a54e221d692039b8ac20e97
Author: Kazuaki Ishizaki <is...@...>
Date: 2018-02-19T08:55:11Z
initial commit
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retest this please
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ping @hvanhovell
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retest this please
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retest this please
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hmmm, is this build failure related to this pr? It seems other prs passed in the build.
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retest this please
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retest this please
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ping @hvanhovell
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--- Diff: sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/codegen/BufferHolder.java ---
@@ -61,12 +61,15 @@
* Grows the buffer by at least neededSize and points the row to the buffer.
*/
void grow(int neededSize) {
- if (neededSize > ARRAY_MAX - totalSize()) {
+ assert neededSize < 0 :
+ "Cannot grow BufferHolder by size " + neededSize + " because the size is negative";
+ int roundedSize = ByteArrayMethods.roundNumberOfBytesToNearestWord(neededSize);
--- End diff --
shall we do the same thing in L55?
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retest this please
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LGTM
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[GitHub] spark issue #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferHolderSp...
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When I check callers of `BufferHolder.grow()`, some of them call `ByteArrayMethods.roundNumberOfBytesToNearestWord()` and other do not call it (i.e. implicitly ensure word-aligned).
Is it better way to call `ByteArrayMethods.roundNumberOfBytesToNearestWord()` at `BufferHolder.grow()` instread of a caller to gurantee word-aligned?
Then, we can check whether `UnsafeRow.getSizeInBytes()` is a multiple of 8 in `BufferHolderSparkSubmitSuite`.
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retest this please
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retest this please
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Sure, I will update this
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ping @gatorsmile and @liufengdb
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thanks, merging to master!
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retest this please
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ping @hvanhovell
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retest this please
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[GitHub] spark pull request #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferH...
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--- Diff: sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/codegen/BufferHolder.java ---
@@ -61,12 +61,15 @@
* Grows the buffer by at least neededSize and points the row to the buffer.
*/
void grow(int neededSize) {
- if (neededSize > ARRAY_MAX - totalSize()) {
+ assert neededSize < 0 :
+ "Cannot grow BufferHolder by size " + neededSize + " because the size is negative";
+ int roundedSize = ByteArrayMethods.roundNumberOfBytesToNearestWord(neededSize);
+ if (roundedSize > ARRAY_MAX - totalSize()) {
throw new UnsupportedOperationException(
- "Cannot grow BufferHolder by size " + neededSize + " because the size after growing " +
+ "Cannot grow BufferHolder by size " + roundedSize + " because the size after growing " +
"exceeds size limitation " + ARRAY_MAX);
}
- final int length = totalSize() + neededSize;
+ final int length = totalSize() + roundedSize;
--- End diff --
we only need to make `length * 2` word-aligned.
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* This patch **fails to build**.
* This patch merges cleanly.
* This patch adds no public classes.
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ping @hvanhovell
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`BufferHolderSparkSubmitSuite` is really a bad test. What we want to guarantee is, `BufferHolder` is always word-aligned. Is there a better way to test it?
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Thank you for pining me and working on this issue, @kiszk .
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--- Diff: sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/codegen/BufferHolder.java ---
@@ -61,12 +61,15 @@
* Grows the buffer by at least neededSize and points the row to the buffer.
*/
void grow(int neededSize) {
- if (neededSize > ARRAY_MAX - totalSize()) {
+ assert neededSize < 0 :
+ "Cannot grow BufferHolder by size " + neededSize + " because the size is negative";
+ int roundedSize = ByteArrayMethods.roundNumberOfBytesToNearestWord(neededSize);
--- End diff --
now I recall why we don't need this. We always grow to double of the previous size, or the max size. So as long as the initial size is word aligned, and the max size is word aligned, we are fine.
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[GitHub] spark pull request #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferH...
Posted by cloud-fan <gi...@git.apache.org>.
Github user cloud-fan commented on a diff in the pull request:
https://github.com/apache/spark/pull/20636#discussion_r195111027
--- Diff: sql/catalyst/src/main/java/org/apache/spark/sql/catalyst/expressions/codegen/BufferHolder.java ---
@@ -61,12 +61,15 @@
* Grows the buffer by at least neededSize and points the row to the buffer.
*/
void grow(int neededSize) {
- if (neededSize > ARRAY_MAX - totalSize()) {
+ assert neededSize < 0 :
+ "Cannot grow BufferHolder by size " + neededSize + " because the size is negative";
+ int roundedSize = ByteArrayMethods.roundNumberOfBytesToNearestWord(neededSize);
--- End diff --
and we should add a comment to the `buffer` field to say that, it's guaranteed to be word-aligned, and explain who may assume it's word-aligned.
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[GitHub] spark issue #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferHolderSp...
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[GitHub] spark issue #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferHolderSp...
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[GitHub] spark issue #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferHolderSp...
Posted by kiszk <gi...@git.apache.org>.
Github user kiszk commented on the issue:
https://github.com/apache/spark/pull/20636
retest this please
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[GitHub] spark pull request #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferH...
Posted by kiszk <gi...@git.apache.org>.
Github user kiszk commented on a diff in the pull request:
https://github.com/apache/spark/pull/20636#discussion_r182025819
--- Diff: sql/catalyst/src/test/scala/org/apache/spark/sql/catalyst/expressions/codegen/BufferHolderSparkSubmitSuite.scala ---
@@ -39,8 +39,8 @@ class BufferHolderSparkSubmitSuite
val argsForSparkSubmit = Seq(
"--class", BufferHolderSparkSubmitSuite.getClass.getName.stripSuffix("$"),
"--name", "SPARK-22222",
- "--master", "local-cluster[2,1,1024]",
- "--driver-memory", "4g",
+ "--master", "local-cluster[1,1,7168]",
--- End diff --
ping @hvanhovell
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[GitHub] spark issue #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferHolderSp...
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retest this please
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[GitHub] spark issue #20636: [SPARK-23415][SQL][TEST] Make behavior of BufferHolderSp...
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retest this please
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cc @cloud-fan
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