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Posted to commits@taverna.apache.org by st...@apache.org on 2016/06/30 12:22:12 UTC

[1/6] incubator-taverna-workbench git commit: TAVERNA-991

Repository: incubator-taverna-workbench
Updated Branches:
  refs/heads/master 214de29c2 -> 5b45869ea


TAVERNA-991


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/commit/6d7fc79f
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/tree/6d7fc79f
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/diff/6d7fc79f

Branch: refs/heads/master
Commit: 6d7fc79f56b268dcb4204d760a165af8e8e4ab0b
Parents: 0e86f72
Author: ThilinaManamgoda <ma...@gmail.com>
Authored: Thu Jun 30 17:27:29 2016 +0530
Committer: ThilinaManamgoda <ma...@gmail.com>
Committed: Thu Jun 30 17:27:29 2016 +0530

----------------------------------------------------------------------
 .../taverna/workbench/ui/impl/menu/ShowLogsAndDataMenuAction.java  | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/6d7fc79f/taverna-menu-impl/src/main/java/org/apache/taverna/workbench/ui/impl/menu/ShowLogsAndDataMenuAction.java
----------------------------------------------------------------------
diff --git a/taverna-menu-impl/src/main/java/org/apache/taverna/workbench/ui/impl/menu/ShowLogsAndDataMenuAction.java b/taverna-menu-impl/src/main/java/org/apache/taverna/workbench/ui/impl/menu/ShowLogsAndDataMenuAction.java
index ab3e3cc..38e50f8 100644
--- a/taverna-menu-impl/src/main/java/org/apache/taverna/workbench/ui/impl/menu/ShowLogsAndDataMenuAction.java
+++ b/taverna-menu-impl/src/main/java/org/apache/taverna/workbench/ui/impl/menu/ShowLogsAndDataMenuAction.java
@@ -60,7 +60,7 @@ public class ShowLogsAndDataMenuAction extends AbstractMenuAction {
 
 			@Override
 			public void actionPerformed(ActionEvent e) {
-				File logsAndDataDir = applicationConfiguration.getApplicationHomeDir();
+				File logsAndDataDir = applicationConfiguration.getApplicationHomeDir().toFile();
 				showDirectory(logsAndDataDir, "Taverna logs and data folder");
 			}
 		};


[2/6] incubator-taverna-workbench git commit: TAVERNA-990

Posted by st...@apache.org.
TAVERNA-990


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/commit/056816eb
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/tree/056816eb
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/diff/056816eb

Branch: refs/heads/master
Commit: 056816eb62d6fbb4d4e836e86b8673850586062c
Parents: 0e86f72
Author: ThilinaManamgoda <ma...@gmail.com>
Authored: Thu Jun 30 17:40:02 2016 +0530
Committer: ThilinaManamgoda <ma...@gmail.com>
Committed: Thu Jun 30 17:40:02 2016 +0530

----------------------------------------------------------------------
 .../ui/impl/configuration/WorkbenchConfigurationImpl.java          | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/056816eb/taverna-configuration-impl/src/main/java/org/apache/taverna/workbench/ui/impl/configuration/WorkbenchConfigurationImpl.java
----------------------------------------------------------------------
diff --git a/taverna-configuration-impl/src/main/java/org/apache/taverna/workbench/ui/impl/configuration/WorkbenchConfigurationImpl.java b/taverna-configuration-impl/src/main/java/org/apache/taverna/workbench/ui/impl/configuration/WorkbenchConfigurationImpl.java
index f31e1e6..4202dd7 100644
--- a/taverna-configuration-impl/src/main/java/org/apache/taverna/workbench/ui/impl/configuration/WorkbenchConfigurationImpl.java
+++ b/taverna-configuration-impl/src/main/java/org/apache/taverna/workbench/ui/impl/configuration/WorkbenchConfigurationImpl.java
@@ -168,7 +168,7 @@ public class WorkbenchConfigurationImpl extends AbstractConfigurable implements
 	private String getDefaultDotLocation() {
 		if (applicationConfiguration == null)
 			return null;
-		File startupDir = applicationConfiguration.getStartupDir();
+		File startupDir = applicationConfiguration.getStartupDir().toFile();
 		if (startupDir == null)
 			return DOT_FALLBACK;
 


[4/6] incubator-taverna-workbench git commit: Merge remote-tracking branch 'ThilinaManamgoda/TAVERNA-991'

Posted by st...@apache.org.
Merge remote-tracking branch 'ThilinaManamgoda/TAVERNA-991'

TAVERNA-991 fix

Contributed by ThilinaManamgoda.

This closes #3.


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/commit/62f4b3db
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/tree/62f4b3db
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/diff/62f4b3db

Branch: refs/heads/master
Commit: 62f4b3db5df61f55e6f1ceb85b5c19af5abe8185
Parents: b62f81d 6d7fc79
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Thu Jun 30 13:19:52 2016 +0100
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Thu Jun 30 13:19:52 2016 +0100

----------------------------------------------------------------------
 .../taverna/workbench/ui/impl/menu/ShowLogsAndDataMenuAction.java  | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)
----------------------------------------------------------------------



[6/6] incubator-taverna-workbench git commit: Disable missing dependencies

Posted by st...@apache.org.
Disable missing dependencies


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/commit/5b45869e
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/tree/5b45869e
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/diff/5b45869e

Branch: refs/heads/master
Commit: 5b45869ea2d5f094bf0a21669632e3ce3ae0c34f
Parents: 34b01ef
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Thu Jun 30 13:22:05 2016 +0100
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Thu Jun 30 13:22:05 2016 +0100

----------------------------------------------------------------------
 taverna-renderers-impl/pom.xml | 2 ++
 taverna-results-view/pom.xml   | 2 ++
 2 files changed, 4 insertions(+)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/5b45869e/taverna-renderers-impl/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-renderers-impl/pom.xml b/taverna-renderers-impl/pom.xml
index 7ab1cc0..8d2e5be 100644
--- a/taverna-renderers-impl/pom.xml
+++ b/taverna-renderers-impl/pom.xml
@@ -72,11 +72,13 @@
 			<artifactId>com.springsource.org.jdom</artifactId>
 			<version>${jdom.version}</version>
 		</dependency>
+		<!--
 		<dependency>
 			<groupId>org.fife.ui.hex</groupId>
 			<artifactId>hexeditor</artifactId>
 			<version>${org.fife.ui.hexeditor.version}</version>
 		</dependency>
+-->
 
 	</dependencies>
 </project>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/5b45869e/taverna-results-view/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-results-view/pom.xml b/taverna-results-view/pom.xml
index cd501d3..75b7d81 100644
--- a/taverna-results-view/pom.xml
+++ b/taverna-results-view/pom.xml
@@ -46,11 +46,13 @@
 			<artifactId>taverna-run-api</artifactId>
 			<version>${taverna.engine.version}</version>
 		</dependency>
+		<!--
 		<dependency>
 			<groupId>org.apache.taverna.engine</groupId>
 			<artifactId>taverna-provenanceconnector</artifactId>
 			<version>${taverna.engine.version}</version>
 		</dependency>
+-->
 	
 		<dependency>
 			<groupId>org.apache.taverna.language</groupId>


[5/6] incubator-taverna-workbench git commit: Squashed commit of the following:

Posted by st...@apache.org.
Squashed commit of the following:

commit be502953eaad33fbb27bc26100f451a02829f7d2
Author: ThilinaManamgoda <ma...@gmail.com>
Date:   Thu Jun 30 17:12:56 2016 +0530

    TAVERNA-989

commit ed2ab6f13b428414ac7905a62fce14b4b7416b4a
Author: ThilinaManamgoda <ma...@gmail.com>
Date:   Thu Jun 30 04:03:29 2016 +0530

    rollback

commit 4c548c8fceebba32532f0e3e068e8ea8d8136dec
Author: ThilinaManamgoda <ma...@gmail.com>
Date:   Thu Jun 30 03:55:48 2016 +0530

    testing

TAVERNA-989 Fix

Contributed by ThilinaManamgoda

This closes #1


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/commit/34b01efe
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/tree/34b01efe
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/diff/34b01efe

Branch: refs/heads/master
Commit: 34b01efeb17c2b4029788d3ee5679bcdbca815a1
Parents: 62f4b3d
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Thu Jun 30 13:21:12 2016 +0100
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Thu Jun 30 13:21:12 2016 +0100

----------------------------------------------------------------------
 .../servicedescriptions/impl/ServiceDescriptionRegistryImpl.java | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/34b01efe/taverna-activity-palette-impl/src/main/java/org/apache/taverna/servicedescriptions/impl/ServiceDescriptionRegistryImpl.java
----------------------------------------------------------------------
diff --git a/taverna-activity-palette-impl/src/main/java/org/apache/taverna/servicedescriptions/impl/ServiceDescriptionRegistryImpl.java b/taverna-activity-palette-impl/src/main/java/org/apache/taverna/servicedescriptions/impl/ServiceDescriptionRegistryImpl.java
index 96e7cf3..efe046d 100644
--- a/taverna-activity-palette-impl/src/main/java/org/apache/taverna/servicedescriptions/impl/ServiceDescriptionRegistryImpl.java
+++ b/taverna-activity-palette-impl/src/main/java/org/apache/taverna/servicedescriptions/impl/ServiceDescriptionRegistryImpl.java
@@ -129,7 +129,7 @@ public class ServiceDescriptionRegistryImpl implements ServiceDescriptionRegistr
 	private File getTavernaStartupConfigurationDirectory() {
 		File distroHome = null;
 		File configDirectory = null;
-		distroHome = applicationConfiguration.getStartupDir();
+		distroHome = applicationConfiguration.getStartupDir().toFile();
 		configDirectory = new File(distroHome, "conf");
 		if (!configDirectory.exists())
 			configDirectory.mkdir();
@@ -185,7 +185,7 @@ public class ServiceDescriptionRegistryImpl implements ServiceDescriptionRegistr
 
 	private File findServiceDescriptionsFile() {
 		File confDir = new File(
-				applicationConfiguration.getApplicationHomeDir(), CONF_DIR);
+				applicationConfiguration.getApplicationHomeDir().toFile() , CONF_DIR);
 		confDir.mkdirs();
 		if (!confDir.isDirectory())
 			throw new RuntimeException("Invalid directory: " + confDir);


[3/6] incubator-taverna-workbench git commit: Merge remote-tracking branch 'ThilinaManamgoda/TAVERNA-990'

Posted by st...@apache.org.
Merge remote-tracking branch 'ThilinaManamgoda/TAVERNA-990'

TAVERNA-990 fix

Contributed by ThilinaManamgoda.

This closes #4


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/commit/b62f81db
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/tree/b62f81db
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/diff/b62f81db

Branch: refs/heads/master
Commit: b62f81db49154ee1b3438816cc5dd7ce9a5373ef
Parents: 214de29 056816e
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Thu Jun 30 13:19:22 2016 +0100
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Thu Jun 30 13:19:22 2016 +0100

----------------------------------------------------------------------
 .../ui/impl/configuration/WorkbenchConfigurationImpl.java          | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)
----------------------------------------------------------------------