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Posted to issues@spark.apache.org by "Bruce Robbins (JIRA)" <ji...@apache.org> on 2018/08/20 19:35:00 UTC

[jira] [Created] (SPARK-25164) Parquet reader builds entire list of columns once for each column

Bruce Robbins created SPARK-25164:
-------------------------------------

             Summary: Parquet reader builds entire list of columns once for each column
                 Key: SPARK-25164
                 URL: https://issues.apache.org/jira/browse/SPARK-25164
             Project: Spark
          Issue Type: Bug
          Components: SQL
    Affects Versions: 2.4.0
            Reporter: Bruce Robbins


{{VectorizedParquetRecordReader.initializeInternal}} loops through each column, and for each column it calls
{noformat}
requestedSchema.getColumns().get(i)
{noformat}
However, {{MessageType.getColumns}} will build the entire column list from getPaths(0).
{noformat}
  public List<ColumnDescriptor> getColumns() {
    List<String[]> paths = this.getPaths(0);
    List<ColumnDescriptor> columns = new ArrayList<ColumnDescriptor>(paths.size());
    for (String[] path : paths) {
      // TODO: optimize this                                                                                                                    
      PrimitiveType primitiveType = getType(path).asPrimitiveType();
      columns.add(new ColumnDescriptor(
                      path,
                      primitiveType,
                      getMaxRepetitionLevel(path),
                      getMaxDefinitionLevel(path)));
    }
    return columns;
  }
{noformat}
This means that for each parquet file, this routine indirectly iterates colCount*colCount times.

This is actually not particularly noticeable unless you have:
 - many parquet files
 - many columns

To verify that this is an issue, I created a 1 million record parquet table with 6000 columns of type double and 67 files (so initializeInternal is called 67 times). I ran the following query:
{noformat}
sql("select * from 6000_1m_double where id1 = 1").collect
{noformat}
I used Spark from the master branch. I had 8 executor threads. The filter returns only a few thousand records. The query ran (on average) for 6.4 minutes.

Then I cached the column list at the top of {{initializeInternal}} as follows:
{noformat}
List<ColumnDescriptor> columnCache = requestedSchema.getColumns();
{noformat}
Then I changed {{initializeInternal}} to use {{columnCache}} rather than {{requestedSchema.getColumns()}}.

With the column cache variable, the same query runs in 5 minutes. So with my simple query, you save %22 of time by not rebuilding the column list for each column.




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