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Posted to builds@beam.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2020/07/08 00:13:17 UTC

Build failed in Jenkins: beam_PostCommit_PortableJar_Spark #1613

See <https://ci-beam.apache.org/job/beam_PostCommit_PortableJar_Spark/1613/display/redirect?page=changes>

Changes:

[Andrew Pilloud] [BEAM-10093] Run ZetaSQL Nexmark in postcommit

[valentyn] Adds Python 3.8 ValidatesRunner tests for Dataflow.

[Robert Bradshaw] [BEAM-4605] Remove portable runner GBK hack.

[Kenneth Knowles] Add checkerFramework to applyJavaNature and disable everywhere since

[Kenneth Knowles] Fix nullability errors in metrics

[Kenneth Knowles] Fix nullability errors in DisplayData

[Kenneth Knowles] Fix some null errors in ZetaSQL translator

[Kenneth Knowles] Fix null error in Beam SQL

[Robert Bradshaw] Fix threading issue with default artifact resolver registration.

[noreply] Fix a class cast bug: TupleTagList is not a collection. (#12183)

[emil] Fix typos in programming guide

[noreply] [BEAM-10336,BEAM-10337] Add SchemaIO abstraction and implement for

[noreply] [BEAM-10283] Add new overloads of withKeyRanges and withRowFilter met…

[noreply] [BEAM-9953[SQL][ZetaSQL] Support Pure SQL user-defined table-valued

[noreply] [BEAM-10308] Make component ID assignments consistent across


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[...truncated 66.47 KB...]
# Verify container has already been built
docker images --format "{{.Repository}}:{{.Tag}}" | grep $PYTHON_CONTAINER_IMAGE
apache/beam_python3.7_sdk:2.24.0.dev

# Set up Python environment
virtualenv -p python$PYTHON_VERSION $ENV_DIR
Using base prefix '/usr'
New python executable in <https://ci-beam.apache.org/job/beam_PostCommit_PortableJar_Spark/ws/src/build/gradleenv/-2047437407/bin/python3.7>
Also creating executable in <https://ci-beam.apache.org/job/beam_PostCommit_PortableJar_Spark/ws/src/build/gradleenv/-2047437407/bin/python>
Installing setuptools, pip, wheel...
done.
Running virtualenv with interpreter /usr/bin/python3.7
. $ENV_DIR/bin/activate
# This file must be used with "source bin/activate" *from bash*
# you cannot run it directly

deactivate () {
    unset -f pydoc >/dev/null 2>&1

    # reset old environment variables
    # ! [ -z ${VAR+_} ] returns true if VAR is declared at all
    if ! [ -z "${_OLD_VIRTUAL_PATH+_}" ] ; then
        PATH="$_OLD_VIRTUAL_PATH"
        export PATH
        unset _OLD_VIRTUAL_PATH
    fi
    if ! [ -z "${_OLD_VIRTUAL_PYTHONHOME+_}" ] ; then
        PYTHONHOME="$_OLD_VIRTUAL_PYTHONHOME"
        export PYTHONHOME
        unset _OLD_VIRTUAL_PYTHONHOME
    fi

    # This should detect bash and zsh, which have a hash command that must
    # be called to get it to forget past commands.  Without forgetting
    # past commands the $PATH changes we made may not be respected
    if [ -n "${BASH-}" ] || [ -n "${ZSH_VERSION-}" ] ; then
        hash -r 2>/dev/null
    fi

    if ! [ -z "${_OLD_VIRTUAL_PS1+_}" ] ; then
        PS1="$_OLD_VIRTUAL_PS1"
        export PS1
        unset _OLD_VIRTUAL_PS1
    fi

    unset VIRTUAL_ENV
    if [ ! "${1-}" = "nondestructive" ] ; then
    # Self destruct!
        unset -f deactivate
    fi
}

# unset irrelevant variables
deactivate nondestructive

VIRTUAL_ENV="<https://ci-beam.apache.org/job/beam_PostCommit_PortableJar_Spark/ws/src/build/gradleenv/-2047437407">
export VIRTUAL_ENV

_OLD_VIRTUAL_PATH="$PATH"
PATH="$VIRTUAL_ENV/bin:$PATH"
export PATH

# unset PYTHONHOME if set
if ! [ -z "${PYTHONHOME+_}" ] ; then
    _OLD_VIRTUAL_PYTHONHOME="$PYTHONHOME"
    unset PYTHONHOME
fi

if [ -z "${VIRTUAL_ENV_DISABLE_PROMPT-}" ] ; then
    _OLD_VIRTUAL_PS1="${PS1-}"
    if [ "x" != x ] ; then
        PS1="${PS1-}"
    else
        PS1="(`basename \"$VIRTUAL_ENV\"`) ${PS1-}"
    fi
    export PS1
fi
basename "$VIRTUAL_ENV"

# Make sure to unalias pydoc if it's already there
alias pydoc 2>/dev/null >/dev/null && unalias pydoc || true

pydoc () {
    python -m pydoc "$@"
}

# This should detect bash and zsh, which have a hash command that must
# be called to get it to forget past commands.  Without forgetting
# past commands the $PATH changes we made may not be respected
if [ -n "${BASH-}" ] || [ -n "${ZSH_VERSION-}" ] ; then
    hash -r 2>/dev/null
fi
pip install --retries 10 -e $PYTHON_ROOT_DIR
Obtaining file://<https://ci-beam.apache.org/job/beam_PostCommit_PortableJar_Spark/ws/src/sdks/python>
Processing /home/jenkins/.cache/pip/wheels/dc/9a/e9/49e627353476cec8484343c4ab656f1e0d783ee77b9dde2d1f/crcmod-1.7-cp37-cp37m-linux_x86_64.whl
Processing /home/jenkins/.cache/pip/wheels/a4/61/fd/c57e374e580aa78a45ed78d5859b3a44436af17e22ca53284f/dill-0.3.1.1-py3-none-any.whl
Collecting fastavro<0.24,>=0.21.4
  Using cached fastavro-0.23.5-cp37-cp37m-manylinux2010_x86_64.whl (1.4 MB)
Processing /home/jenkins/.cache/pip/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0/future-0.18.2-py3-none-any.whl
Collecting grpcio<2,>=1.29.0
  Using cached grpcio-1.30.0-cp37-cp37m-manylinux2010_x86_64.whl (3.0 MB)
Processing /home/jenkins/.cache/pip/wheels/0a/7d/38/ea4eaf831518e6cd867b515b88919a9785eb66f11def5ab859/hdfs-2.5.8-py3-none-any.whl
Collecting httplib2<0.18.0,>=0.8
  Using cached httplib2-0.17.4-py3-none-any.whl (95 kB)
Collecting mock<3.0.0,>=1.0.1
  Using cached mock-2.0.0-py2.py3-none-any.whl (56 kB)
Collecting numpy<2,>=1.14.3
  Using cached numpy-1.19.0-cp37-cp37m-manylinux2010_x86_64.whl (14.6 MB)
Collecting pymongo<4.0.0,>=3.8.0
  Using cached pymongo-3.10.1-cp37-cp37m-manylinux2014_x86_64.whl (462 kB)
Processing /home/jenkins/.cache/pip/wheels/86/73/7a/3b3f76a2142176605ff38fbca574327962c71e25a43197a4c1/oauth2client-3.0.0-py3-none-any.whl
Collecting protobuf<4,>=3.5.0.post1
  Using cached protobuf-3.12.2-cp37-cp37m-manylinux1_x86_64.whl (1.3 MB)
Collecting pydot<2,>=1.2.0
  Using cached pydot-1.4.1-py2.py3-none-any.whl (19 kB)
Collecting python-dateutil<3,>=2.8.0
  Using cached python_dateutil-2.8.1-py2.py3-none-any.whl (227 kB)
Collecting pytz>=2018.3
  Using cached pytz-2020.1-py2.py3-none-any.whl (510 kB)
Collecting requests<3.0.0,>=2.24.0
  Using cached requests-2.24.0-py2.py3-none-any.whl (61 kB)
Collecting typing-extensions<3.8.0,>=3.7.0
  Using cached typing_extensions-3.7.4.2-py3-none-any.whl (22 kB)
Processing /home/jenkins/.cache/pip/wheels/bc/49/5f/fdb5b9d85055c478213e0158ac122b596816149a02d82e0ab1/avro_python3-1.9.2.1-py3-none-any.whl
Collecting pyarrow<0.18.0,>=0.15.1
  Using cached pyarrow-0.17.1-cp37-cp37m-manylinux2014_x86_64.whl (63.8 MB)
Collecting six>=1.5.2
  Using cached six-1.15.0-py2.py3-none-any.whl (10 kB)
Processing /home/jenkins/.cache/pip/wheels/9b/04/dd/7daf4150b6d9b12949298737de9431a324d4b797ffd63f526e/docopt-0.6.2-py2.py3-none-any.whl
Collecting pbr>=0.11
  Using cached pbr-5.4.5-py2.py3-none-any.whl (110 kB)
Collecting pyasn1>=0.1.7
  Using cached pyasn1-0.4.8-py2.py3-none-any.whl (77 kB)
Collecting rsa>=3.1.4
  Using cached rsa-4.6-py3-none-any.whl (47 kB)
Collecting pyasn1-modules>=0.0.5
  Using cached pyasn1_modules-0.2.8-py2.py3-none-any.whl (155 kB)
Requirement already satisfied: setuptools in ./build/gradleenv/-2047437407/lib/python3.7/site-packages (from protobuf<4,>=3.5.0.post1->apache-beam==2.24.0.dev0) (49.1.0)
Collecting pyparsing>=2.1.4
  Using cached pyparsing-2.4.7-py2.py3-none-any.whl (67 kB)
Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1
  Using cached urllib3-1.25.9-py2.py3-none-any.whl (126 kB)
Collecting idna<3,>=2.5
  Using cached idna-2.10-py2.py3-none-any.whl (58 kB)
Collecting chardet<4,>=3.0.2
  Using cached chardet-3.0.4-py2.py3-none-any.whl (133 kB)
Collecting certifi>=2017.4.17
  Using cached certifi-2020.6.20-py2.py3-none-any.whl (156 kB)
Installing collected packages: crcmod, dill, pytz, fastavro, future, six, grpcio, docopt, urllib3, idna, chardet, certifi, requests, hdfs, httplib2, pbr, mock, numpy, pymongo, pyasn1, rsa, pyasn1-modules, oauth2client, protobuf, pyparsing, pydot, python-dateutil, typing-extensions, avro-python3, pyarrow, apache-beam
  Running setup.py develop for apache-beam
Successfully installed apache-beam avro-python3-1.9.2.1 certifi-2020.6.20 chardet-3.0.4 crcmod-1.7 dill-0.3.1.1 docopt-0.6.2 fastavro-0.23.5 future-0.18.2 grpcio-1.30.0 hdfs-2.5.8 httplib2-0.17.4 idna-2.10 mock-2.0.0 numpy-1.19.0 oauth2client-3.0.0 pbr-5.4.5 protobuf-3.12.2 pyarrow-0.17.1 pyasn1-0.4.8 pyasn1-modules-0.2.8 pydot-1.4.1 pymongo-3.10.1 pyparsing-2.4.7 python-dateutil-2.8.1 pytz-2020.1 requests-2.24.0 rsa-4.6 six-1.15.0 typing-extensions-3.7.4.2 urllib3-1.25.9

PIPELINE_PY="
import apache_beam as beam
from apache_beam.options.pipeline_options import PipelineOptions
from apache_beam.options.pipeline_options import SetupOptions
from apache_beam.testing.util import assert_that
from apache_beam.testing.util import equal_to
from apache_beam.transforms import Create
from apache_beam.transforms import Map

# To test that our main session is getting plumbed through artifact staging
# correctly, create a global variable. If the main session is not plumbed
# through properly, global_var will be undefined and the pipeline will fail.
global_var = 1

pipeline_options = PipelineOptions()
pipeline_options.view_as(SetupOptions).save_main_session = True
pipeline = beam.Pipeline(options=pipeline_options)
pcoll = (pipeline
         | Create([0, 1, 2])
         | Map(lambda x: x + global_var))
assert_that(pcoll, equal_to([1, 2, 3]))

result = pipeline.run()
result.wait_until_finish()
"

if [[ "$RUNNER" = "FlinkRunner" ]]; then
  INPUT_JAR_ARG="flink_job_server_jar"
else
  INPUT_JAR_ARG="spark_job_server_jar"
fi

# Create the jar
OUTPUT_JAR=flink-test-$(date +%Y%m%d-%H%M%S).jar
date +%Y%m%d-%H%M%S
(python -c "$PIPELINE_PY" \
  --runner "$RUNNER" \
  --"$INPUT_JAR_ARG" "$JOB_SERVER_JAR" \
  --output_executable_path $OUTPUT_JAR \
  --parallelism 1 \
  --sdk_worker_parallelism 1 \
  --environment_type DOCKER \
  --environment_config=$PYTHON_CONTAINER_IMAGE \
) || TEST_EXIT_CODE=$? # don't fail fast here; clean up before exiting
WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
WARNING:apache_beam.options.pipeline_options:Discarding unparseable args: ['--parallelism', '1']
ERROR:root:java.lang.IllegalArgumentException: Expected exactly one jar on sun.misc.Launcher$AppClassLoader@1b6d3586
Traceback (most recent call last):
  File "<string>", line 24, in <module>
  File "<https://ci-beam.apache.org/job/beam_PostCommit_PortableJar_Spark/ws/src/sdks/python/apache_beam/runners/portability/portable_runner.py",> line 537, in wait_until_finish
    raise self._runtime_exception
RuntimeError: Pipeline BeamApp-jenkins-0708001312-c775707a_d6567943-cc51-43da-9c26-92f8f9faa8a3 failed in state FAILED: java.lang.IllegalArgumentException: Expected exactly one jar on sun.misc.Launcher$AppClassLoader@1b6d3586

if [[ "$TEST_EXIT_CODE" -eq 0 ]]; then
  # Execute the jar
  java -jar $OUTPUT_JAR || TEST_EXIT_CODE=$?
fi

rm -rf $ENV_DIR
rm -f $OUTPUT_JAR

if [[ "$TEST_EXIT_CODE" -eq 0 ]]; then
  echo ">>> SUCCESS"
else
  echo ">>> FAILURE"
fi
exit $TEST_EXIT_CODE
>>> FAILURE

> Task :runners:spark:job-server:testJavaJarCreatorPy37 FAILED

FAILURE: Build failed with an exception.

* Where:
Build file '<https://ci-beam.apache.org/job/beam_PostCommit_PortableJar_Spark/ws/src/runners/spark/job-server/build.gradle'> line: 167

* What went wrong:
Execution failed for task ':runners:spark:job-server:testJavaJarCreatorPy37'.
> Process 'command 'sh'' finished with non-zero exit value 1

* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. Run with --scan to get full insights.

* Get more help at https://help.gradle.org

Deprecated Gradle features were used in this build, making it incompatible with Gradle 6.0.
Use '--warning-mode all' to show the individual deprecation warnings.
See https://docs.gradle.org/5.2.1/userguide/command_line_interface.html#sec:command_line_warnings

BUILD FAILED in 12m 46s
67 actionable tasks: 58 executed, 8 from cache, 1 up-to-date

Publishing build scan...
https://gradle.com/s/4cnwo4rz5cwby

Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure

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