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Posted to notifications@ctakes.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2012/10/30 05:10:43 UTC

Build failed in Jenkins: cTAKES-trunk-compiletest #35

See <https://builds.apache.org/job/cTAKES-trunk-compiletest/35/changes>

Changes:

[mattcoarr] fixed some compilation issues that with the assertion evaluation code that were causing problems with some "maven compile" builds

------------------------------------------
Started by an SCM change
Building remotely on ubuntu4 in workspace <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/>
Updating http://svn.apache.org/repos/asf/incubator/ctakes/trunk
A         ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java
U         ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java
A         ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionComponents.java
A         ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval
A         ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/XMIReader.java
A         ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvalBasedOnModifier.java
U         ctakes-assertion/pom.xml
U         ctakes-ne-contexts/pom.xml
U         ctakes-pad-term-spotter/pom.xml
U         ctakes-dependency-parser/pom.xml
U         ctakes-pos-tagger/pom.xml
U         ctakes-dictionary-lookup/pom.xml
U         ctakes-side-effect/pom.xml
U         ctakes-distribution/pom.xml
U         ctakes-distribution/RELEASE_NOTES.html
U         ctakes-coreference/pom.xml
U         ctakes-constituency-parser/pom.xml
U         ctakes-clinical-pipeline/pom.xml
U         pom.xml
U         ctakes-drug-ner/pom.xml
U         ctakes-preprocessor/pom.xml
U         ctakes-relation-extractor/pom.xml
U         ctakes-core/pom.xml
U         ctakes-lvg/pom.xml
U         ctakes-smoking-status/pom.xml
U         ctakes-context-tokenizer/pom.xml
U         ctakes-chunker/pom.xml
U         ctakes-utils/pom.xml
U         ctakes-type-system/pom.xml
At revision 1403611
Parsing POMs
Modules changed, recalculating dependency graph
[cTAKES-trunk-compiletest] $ /home/hudson/tools/java/latest1.6/bin/java -cp /home/jenkins/jenkins-slave/maven3-agent.jar:/home/hudson/tools/maven/latest3/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /home/hudson/tools/maven/latest3 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven3-interceptor.jar 58764
<===[JENKINS REMOTING CAPACITY]===>channel started
   log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/pom.xml> -Dmaven.repo.local=/home/jenkins/jenkins-slave/maven-repositories/1 -amd -pl org.apache.ctakes:ctakes-assertion clean compile test
[INFO] Scanning for projects...
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT
[WARNING] 'dependencies.dependency.systemPath' for net.sourceforge.openai:fsm:jar should not point at files within the project directory, ${project.basedir}/lib/OpenAI_FSM.jar will be unresolvable by dependent projects @ line 82, column 16
[WARNING] 'dependencies.dependency.systemPath' for findstruct:findstruct:jar should not point at files within the project directory, ${project.basedir}/lib/FindStructAPI.jar will be unresolvable by dependent projects @ line 89, column 16
[WARNING] 'dependencies.dependency.systemPath' for sqlWrapper:sqlWrapper:jar should not point at files within the project directory, ${project.basedir}/lib/SQLWrapper.jar will be unresolvable by dependent projects @ line 96, column 16
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT
[WARNING] 'dependencies.dependency.systemPath' for lvg2010dist:lvg2010dist:jar should not point at files within the project directory, ${project.basedir}/lib/lvg2010dist.jar will be unresolvable by dependent projects @ line 59, column 16
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.apache.ctakes:ctakes-drug-ner:jar:3.1.0-incubating-SNAPSHOT
[WARNING] 'dependencies.dependency.systemPath' for net.sourceforge.openai:fsm:jar should not point at files within the project directory, ${project.basedir}/../ctakes-core/lib/OpenAI_FSM.jar will be unresolvable by dependent projects @ line 86, column 16
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT
[INFO] [WARNING] 'dependencies.dependency.(groupId:artifactId:type:classifier)' must be unique: junit:junit:jar -> duplicate declaration of version (?) @ line 146, column 15
[WARNING] 'dependencies.dependency.systemPath' for org.mitre.medfacts:medfacts-i2b2:jar should not point at files within the project directory, ${project.basedir}/lib/med-facts-i2b2-1.2-SNAPSHOT.jar will be unresolvable by dependent projects @ line 184, column 16
[WARNING] 'dependencies.dependency.systemPath' for org.mitre.medfacts:medfacts-zoner:jar should not point at files within the project directory, ${project.basedir}/lib/med-facts-zoner-1.1.jar will be unresolvable by dependent projects @ line 191, column 16
[WARNING] 'dependencies.dependency.systemPath' for org.mitre.jcarafe.core:jcarafe.core:jar should not point at files within the project directory, ${project.basedir}/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar will be unresolvable by dependent projects @ line 198, column 16
[WARNING] 'dependencies.dependency.systemPath' for org.mitre.jcarafe.ext:jcarafe.ext:jar should not point at files within the project directory, ${project.basedir}/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar will be unresolvable by dependent projects @ line 205, column 16
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.apache.ctakes:ctakes-distribution:pom:3.1.0-incubating-SNAPSHOT
[WARNING] 'dependencies.dependency.(groupId:artifactId:type:classifier)' must be unique: org.apache.ctakes:ctakes-ne-contexts:jar -> duplicate declaration of version (?) @ line 99, column 15
[WARNING] 
[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.
[WARNING] 
[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.
[WARNING] 
------------------------------------------------------------------------
[INFO] Reactor Build Order:
[INFO] 
[INFO] Apache cTAKES Assertion
[INFO] Apache cTAKES ctakes-clinical-pipeline
[INFO] Apache cTAKES Relation Extractor
[INFO] Apache cTAKES Distribution
Projects to build: [MavenProject: org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT @ <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-assertion/pom.xml,> MavenProject: org.apache.ctakes:ctakes-clinical-pipeline:3.1.0-incubating-SNAPSHOT @ <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-clinical-pipeline/pom.xml,> MavenProject: org.apache.ctakes:ctakes-relation-extractor:3.1.0-incubating-SNAPSHOT @ <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-relation-extractor/pom.xml,> MavenProject: org.apache.ctakes:ctakes-distribution:3.1.0-incubating-SNAPSHOT @ <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-distribution/pom.xml]>
projectStarted org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Apache cTAKES Assertion 3.1.0-incubating-SNAPSHOT
[INFO] ------------------------------------------------------------------------
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-type-system/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-core/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-utils/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
Downloading: http://repository.apache.org/snapshots/junit/junit/maven-metadata.xml
Downloading: http://repo1.maven.org/maven2/junit/junit/maven-metadata.xml
Downloaded: http://repo1.maven.org/maven2/junit/junit/maven-metadata.xml (868 B at 9.4 KB/sec)
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-pos-tagger/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-dependency-parser/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
Downloading: http://cleartk.googlecode.com/svn/repo/junit/junit/maven-metadata.xml
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-lvg/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
Downloading: http://cleartk.googlecode.com/svn/repo/org/apache/ctakes/ctakes-lvg/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
Downloading: http://repository.apache.org/snapshots/com/googlecode/clearparser/clearparser/0.4.0-SNAPSHOT/maven-metadata.xml
Downloading: http://cleartk.googlecode.com/svn/repo/com/googlecode/clearparser/clearparser/0.4.0-SNAPSHOT/maven-metadata.xml
Downloaded: http://cleartk.googlecode.com/svn/repo/com/googlecode/clearparser/clearparser/0.4.0-SNAPSHOT/maven-metadata.xml (2 KB at 2.4 KB/sec)
Downloading: https://oss.sonatype.org/content/repositories/snapshots/junit/junit/maven-metadata.xml
Downloaded: https://oss.sonatype.org/content/repositories/snapshots/junit/junit/maven-metadata.xml (369 B at 0.3 KB/sec)
Downloading: http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-examples-0.6.2.pom
Downloaded: http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-examples-0.6.2.pom (5 KB at 12.8 KB/sec)
Downloading: http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleartk-ml-svmlight-1.1.0.pom
Downloaded: http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleartk-ml-svmlight-1.1.0.pom (2 KB at 4.2 KB/sec)
Downloading: http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/cleartk-named-entity-0.6.3.pom
Downloaded: http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/cleartk-named-entity-0.6.3.pom (3 KB at 6.6 KB/sec)
Downloading: http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleartk-clearparser-0.7.1.pom
Downloaded: http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleartk-clearparser-0.7.1.pom (4 KB at 6.3 KB/sec)
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-type-system/3.1.0-incubating-SNAPSHOT/ctakes-type-system-3.1.0-incubating-SNAPSHOT.jar
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-core/3.1.0-incubating-SNAPSHOT/ctakes-core-3.1.0-incubating-SNAPSHOT.jar
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-utils/3.1.0-incubating-SNAPSHOT/ctakes-utils-3.1.0-incubating-SNAPSHOT.jar
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-pos-tagger/3.1.0-incubating-SNAPSHOT/ctakes-pos-tagger-3.1.0-incubating-SNAPSHOT.jar
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-dependency-parser/3.1.0-incubating-SNAPSHOT/ctakes-dependency-parser-3.1.0-incubating-SNAPSHOT.jar
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-lvg/3.1.0-incubating-SNAPSHOT/ctakes-lvg-3.1.0-incubating-SNAPSHOT.jar
Downloading: http://cleartk.googlecode.com/svn/repo/org/apache/ctakes/ctakes-lvg/3.1.0-incubating-SNAPSHOT/ctakes-lvg-3.1.0-incubating-SNAPSHOT.jar
Downloading: http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-examples-0.6.2.jar
Downloading: http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleartk-ml-svmlight-1.1.0.jar
Downloading: http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/cleartk-named-entity-0.6.3.jar
Downloading: http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleartk-clearparser-0.7.1.jar
Downloaded: http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/cleartk-named-entity-0.6.3.jar (32 KB at 65.1 KB/sec)
Downloaded: http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleartk-ml-svmlight-1.1.0.jar (56 KB at 106.0 KB/sec)
Downloaded: http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-examples-0.6.2.jar (4833 KB at 3595.9 KB/sec)
Downloaded: http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleartk-clearparser-0.7.1.jar (82652 KB at 19954.5 KB/sec)
projectFailed org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT
sessionEnded
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO] 
[INFO] Apache cTAKES Assertion ........................... FAILURE [14.784s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED
[INFO] Apache cTAKES Relation Extractor .................. SKIPPED
[INFO] Apache cTAKES Distribution ........................ SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 20.454s
[INFO] Finished at: Tue Oct 30 04:09:09 UTC 2012
[INFO] Final Memory: 9M/58M
[INFO] ------------------------------------------------------------------------
Projects to build: [MavenProject: org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT @ <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-assertion/pom.xml,> MavenProject: org.apache.ctakes:ctakes-clinical-pipeline:3.1.0-incubating-SNAPSHOT @ <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-clinical-pipeline/pom.xml,> MavenProject: org.apache.ctakes:ctakes-relation-extractor:3.1.0-incubating-SNAPSHOT @ <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-relation-extractor/pom.xml,> MavenProject: org.apache.ctakes:ctakes-distribution:3.1.0-incubating-SNAPSHOT @ <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-distribution/pom.xml]>
[JENKINS] Archiving disabled - not archiving <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-distribution/pom.xml>
[JENKINS] Archiving disabled - not archiving <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-clinical-pipeline/pom.xml>
[JENKINS] Archiving disabled - not archiving <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-assertion/pom.xml>
[JENKINS] Archiving disabled - not archiving <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-relation-extractor/pom.xml>
Waiting for Jenkins to finish collecting data
mavenExecutionResult exceptions not empty
message : Failed to execute goal on project ctakes-assertion: Could not resolve dependencies for project org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The following artifacts could not be resolved: org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not find artifact org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in Nexus (http://repository.apache.org/snapshots)
cause : Could not resolve dependencies for project org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The following artifacts could not be resolved: org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not find artifact org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in Nexus (http://repository.apache.org/snapshots)
Stack trace : 
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal on project ctakes-assertion: Could not resolve dependencies for project org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The following artifacts could not be resolved: org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not find artifact org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in Nexus (http://repository.apache.org/snapshots)
	at org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDependencies(LifecycleDependencyResolver.java:196)
	at org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.resolveProjectDependencies(LifecycleDependencyResolver.java:108)
	at org.apache.maven.lifecycle.internal.MojoExecutor.ensureDependenciesAreResolved(MojoExecutor.java:258)
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:201)
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
	at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84)
	at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59)
	at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183)
	at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161)
	at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319)
	at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156)
	at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329)
	at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239)
	at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158)
	at hudson.maven.Maven3Builder.call(Maven3Builder.java:98)
	at hudson.maven.Maven3Builder.call(Maven3Builder.java:64)
	at hudson.remoting.UserRequest.perform(UserRequest.java:118)
	at hudson.remoting.UserRequest.perform(UserRequest.java:48)
	at hudson.remoting.Request$2.run(Request.java:326)
	at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
	at java.lang.Thread.run(Thread.java:662)
Caused by: org.apache.maven.project.DependencyResolutionException: Could not resolve dependencies for project org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The following artifacts could not be resolved: org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not find artifact org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in Nexus (http://repository.apache.org/snapshots)
	at org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(DefaultProjectDependenciesResolver.java:170)
	at org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDependencies(LifecycleDependencyResolver.java:171)
	... 30 more
Caused by: org.sonatype.aether.resolution.DependencyResolutionException: The following artifacts could not be resolved: org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not find artifact org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in Nexus (http://repository.apache.org/snapshots)
	at org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependencies(DefaultRepositorySystem.java:412)
	at org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(DefaultProjectDependenciesResolver.java:164)
	... 31 more
Caused by: org.sonatype.aether.resolution.ArtifactResolutionException: The following artifacts could not be resolved: org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT, org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not find artifact org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in Nexus (http://repository.apache.org/snapshots)
	at org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultArtifactResolver.java:541)
	at org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolveArtifacts(DefaultArtifactResolver.java:220)
	at org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependencies(DefaultRepositorySystem.java:395)
	... 32 more
Caused by: org.sonatype.aether.transfer.ArtifactNotFoundException: Could not find artifact org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in Nexus (http://repository.apache.org/snapshots)
	at org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonRepositoryConnector.java:945)
	at org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonRepositoryConnector.java:940)
	at org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush(WagonRepositoryConnector.java:695)
	at org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush(WagonRepositoryConnector.java:689)
	at org.sonatype.aether.connector.wagon.WagonRepositoryConnector.get(WagonRepositoryConnector.java:445)
	at org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultArtifactResolver.java:460)
	... 34 more
Sending e-mails to: ctakes-notifications@incubator.apache.org mattcoarr@gmail.com
channel stopped

Jenkins build is back to normal : cTAKES-trunk-compiletest #36

Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/cTAKES-trunk-compiletest/36/>

Re: Build failed in Jenkins: cTAKES-trunk-compiletest #35

Posted by "Coarr, Matt" <mc...@mitre.org>.
I hadn't logged in.  My apache account worked and now I see the "build
now" button :-)

Thanks Steve



On 2012-10-30 12:13 , "Steven Bethard" <st...@Colorado.EDU> wrote:

>I have a button that says "Build Now" on the left column here (after I
>log in):

Re: Build failed in Jenkins: cTAKES-trunk-compiletest #35

Posted by Steven Bethard <st...@Colorado.EDU>.
On Oct 30, 2012, at 5:08 PM, "Coarr, Matt" <mc...@mitre.org> wrote:
> Regarding the dependency on cleartk-examples, that will be going away.  I
> had some sample code that I copied from there that had dependencies on the
> sample types.  I'll be removing the dependency.
> 
> I see that you triggered build 36 and it completed normally (even though
> it says there were no changes).   But at least it's back to normal.
> 
> https://builds.apache.org/job/cTAKES-trunk-compiletest/36/
> 
> How did you start the build?  I didn't see any way to fire it off manually.

I have a button that says "Build Now" on the left column here (after I log in):

https://builds.apache.org/job/cTAKES-trunk-compiletest/

Steve


> On 2012-10-30 11:59 , "Steven Bethard" <st...@Colorado.EDU> wrote:
> 
>> I wonder though why you're depending on that? It looks like maybe a
>> transitive dependency brought in by your dependency on cleartk-examplesŠ?
>> I certainly wouldn't recommend depending on cleartk-examples - we don't
>> maintain any backward compatibility for the ClearTK example code. What
>> are you using from there?
>> 
>

Re: Build failed in Jenkins: cTAKES-trunk-compiletest #35

Posted by "Coarr, Matt" <mc...@mitre.org>.
Regarding the dependency on cleartk-examples, that will be going away.  I
had some sample code that I copied from there that had dependencies on the
sample types.  I'll be removing the dependency.

I see that you triggered build 36 and it completed normally (even though
it says there were no changes).   But at least it's back to normal.

https://builds.apache.org/job/cTAKES-trunk-compiletest/36/


How did you start the build?  I didn't see any way to fire it off manually.

Matt


On 2012-10-30 11:59 , "Steven Bethard" <st...@Colorado.EDU> wrote:

>I wonder though why you're depending on that? It looks like maybe a
>transitive dependency brought in by your dependency on cleartk-examplesŠ?
>I certainly wouldn't recommend depending on cleartk-examples - we don't
>maintain any backward compatibility for the ClearTK example code. What
>are you using from there?
>

Re: Build failed in Jenkins: cTAKES-trunk-compiletest #35

Posted by Steven Bethard <st...@Colorado.EDU>.
On Oct 30, 2012, at 4:03 PM, "Coarr, Matt" <mc...@mitre.org> wrote:
> From what I can tell, I'm somehow causing the jenkins build
> "cTAKES-trunk-compiletest" to fail.
>
> On the command line, I am able to run (from the ctakes root directory):
> * mvn clean
> * rm -r ~/.m2/repository/org/apache/ctakes
> * mvn compile
> * mvn clean
> * rm -r ~/.m2/repository/org/apache/ctakes
> * mvn package
>
> So I'm not sure why this build is failing in jenkins.

I just `svn up`'d and `mvn clean test`ed, and I don't get any errors either.

Looking at the log of the build isn't very enlightening either. It just seems to die after cleartk-clearparser.

I wonder though why you're depending on that? It looks like maybe a transitive dependency brought in by your dependency on cleartk-examples…? I certainly wouldn't recommend depending on cleartk-examples - we don't maintain any backward compatibility for the ClearTK example code. What are you using from there?

Steve

>
> I have no outstanding changes other than each module's .classpath and
> ./settings/org.eclipse.m2e.core.prefs file (which are updated by eclipse,
> so they don't match the svn repository).
>
> I even removed all the .classpath and settings/org.eclipse.m2e.core.prefs
> files, ran svn update (so now I have a pristine working copy).  Then I
> tried "mvn clean" and "mvn compile".  Again, no trouble.
>
> So why is Jenkins failing to build?
>
> Matt
>
>
> On 2012-10-30 00:10 , "Apache Jenkins Server" <je...@builds.apache.org>
> wrote:
>
>> See <https://builds.apache.org/job/cTAKES-trunk-compiletest/35/changes>
>>
>> Changes:
>>
>> [mattcoarr] fixed some compilation issues that with the assertion
>> evaluation code that were causing problems with some "maven compile"
>> builds
>>
>> ------------------------------------------
>> Started by an SCM change
>> Building remotely on ubuntu4 in workspace
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/>
>> Updating http://svn.apache.org/repos/asf/incubator/ctakes/trunk
>> A
>> ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleart
>> k/TrainAssertionModel.java
>> U
>> ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleart
>> k/AssertionCleartkAnalysisEngine.java
>> A
>> ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleart
>> k/AssertionComponents.java
>> A         ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval
>> A
>> ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/XMIReader.
>> java
>> A
>> ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionE
>> valBasedOnModifier.java
>> U         ctakes-assertion/pom.xml
>> U         ctakes-ne-contexts/pom.xml
>> U         ctakes-pad-term-spotter/pom.xml
>> U         ctakes-dependency-parser/pom.xml
>> U         ctakes-pos-tagger/pom.xml
>> U         ctakes-dictionary-lookup/pom.xml
>> U         ctakes-side-effect/pom.xml
>> U         ctakes-distribution/pom.xml
>> U         ctakes-distribution/RELEASE_NOTES.html
>> U         ctakes-coreference/pom.xml
>> U         ctakes-constituency-parser/pom.xml
>> U         ctakes-clinical-pipeline/pom.xml
>> U         pom.xml
>> U         ctakes-drug-ner/pom.xml
>> U         ctakes-preprocessor/pom.xml
>> U         ctakes-relation-extractor/pom.xml
>> U         ctakes-core/pom.xml
>> U         ctakes-lvg/pom.xml
>> U         ctakes-smoking-status/pom.xml
>> U         ctakes-context-tokenizer/pom.xml
>> U         ctakes-chunker/pom.xml
>> U         ctakes-utils/pom.xml
>> U         ctakes-type-system/pom.xml
>> At revision 1403611
>> Parsing POMs
>> Modules changed, recalculating dependency graph
>> [cTAKES-trunk-compiletest] $ /home/hudson/tools/java/latest1.6/bin/java
>> -cp
>> /home/jenkins/jenkins-slave/maven3-agent.jar:/home/hudson/tools/maven/late
>> st3/boot/plexus-classworlds-2.4.jar
>> org.jvnet.hudson.maven3.agent.Maven3Main /home/hudson/tools/maven/latest3
>> /home/jenkins/jenkins-slave/slave.jar
>> /home/jenkins/jenkins-slave/maven3-interceptor.jar 58764
>> <===[JENKINS REMOTING CAPACITY]===>channel started
>>  log4j:WARN No appenders could be found for logger
>> (org.apache.commons.beanutils.converters.BooleanConverter).
>> log4j:WARN Please initialize the log4j system properly.
>> Executing Maven:  -B -f
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/pom.xml>
>> -Dmaven.repo.local=/home/jenkins/jenkins-slave/maven-repositories/1 -amd
>> -pl org.apache.ctakes:ctakes-assertion clean compile test
>> [INFO] Scanning for projects...
>> [WARNING]
>> [WARNING] Some problems were encountered while building the effective
>> model for org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT
>> [WARNING] 'dependencies.dependency.systemPath' for
>> net.sourceforge.openai:fsm:jar should not point at files within the
>> project directory, ${project.basedir}/lib/OpenAI_FSM.jar will be
>> unresolvable by dependent projects @ line 82, column 16
>> [WARNING] 'dependencies.dependency.systemPath' for
>> findstruct:findstruct:jar should not point at files within the project
>> directory, ${project.basedir}/lib/FindStructAPI.jar will be unresolvable
>> by dependent projects @ line 89, column 16
>> [WARNING] 'dependencies.dependency.systemPath' for
>> sqlWrapper:sqlWrapper:jar should not point at files within the project
>> directory, ${project.basedir}/lib/SQLWrapper.jar will be unresolvable by
>> dependent projects @ line 96, column 16
>> [WARNING]
>> [WARNING] Some problems were encountered while building the effective
>> model for org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT
>> [WARNING] 'dependencies.dependency.systemPath' for
>> lvg2010dist:lvg2010dist:jar should not point at files within the project
>> directory, ${project.basedir}/lib/lvg2010dist.jar will be unresolvable by
>> dependent projects @ line 59, column 16
>> [WARNING]
>> [WARNING] Some problems were encountered while building the effective
>> model for org.apache.ctakes:ctakes-drug-ner:jar:3.1.0-incubating-SNAPSHOT
>> [WARNING] 'dependencies.dependency.systemPath' for
>> net.sourceforge.openai:fsm:jar should not point at files within the
>> project directory, ${project.basedir}/../ctakes-core/lib/OpenAI_FSM.jar
>> will be unresolvable by dependent projects @ line 86, column 16
>> [WARNING]
>> [WARNING] Some problems were encountered while building the effective
>> model for org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT
>> [INFO] [WARNING]
>> 'dependencies.dependency.(groupId:artifactId:type:classifier)' must be
>> unique: junit:junit:jar -> duplicate declaration of version (?) @ line
>> 146, column 15
>> [WARNING] 'dependencies.dependency.systemPath' for
>> org.mitre.medfacts:medfacts-i2b2:jar should not point at files within the
>> project directory, ${project.basedir}/lib/med-facts-i2b2-1.2-SNAPSHOT.jar
>> will be unresolvable by dependent projects @ line 184, column 16
>> [WARNING] 'dependencies.dependency.systemPath' for
>> org.mitre.medfacts:medfacts-zoner:jar should not point at files within
>> the project directory, ${project.basedir}/lib/med-facts-zoner-1.1.jar
>> will be unresolvable by dependent projects @ line 191, column 16
>> [WARNING] 'dependencies.dependency.systemPath' for
>> org.mitre.jcarafe.core:jcarafe.core:jar should not point at files within
>> the project directory,
>> ${project.basedir}/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar will be
>> unresolvable by dependent projects @ line 198, column 16
>> [WARNING] 'dependencies.dependency.systemPath' for
>> org.mitre.jcarafe.ext:jcarafe.ext:jar should not point at files within
>> the project directory,
>> ${project.basedir}/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar will be
>> unresolvable by dependent projects @ line 205, column 16
>> [WARNING]
>> [WARNING] Some problems were encountered while building the effective
>> model for
>> org.apache.ctakes:ctakes-distribution:pom:3.1.0-incubating-SNAPSHOT
>> [WARNING] 'dependencies.dependency.(groupId:artifactId:type:classifier)'
>> must be unique: org.apache.ctakes:ctakes-ne-contexts:jar -> duplicate
>> declaration of version (?) @ line 99, column 15
>> [WARNING]
>> [WARNING] It is highly recommended to fix these problems because they
>> threaten the stability of your build.
>> [WARNING]
>> [WARNING] For this reason, future Maven versions might no longer support
>> building such malformed projects.
>> [WARNING]
>> ------------------------------------------------------------------------
>> [INFO] Reactor Build Order:
>> [INFO]
>> [INFO] Apache cTAKES Assertion
>> [INFO] Apache cTAKES ctakes-clinical-pipeline
>> [INFO] Apache cTAKES Relation Extractor
>> [INFO] Apache cTAKES Distribution
>> Projects to build: [MavenProject:
>> org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT @
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-assertio
>> n/pom.xml,> MavenProject:
>> org.apache.ctakes:ctakes-clinical-pipeline:3.1.0-incubating-SNAPSHOT @
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-clinical
>> -pipeline/pom.xml,> MavenProject:
>> org.apache.ctakes:ctakes-relation-extractor:3.1.0-incubating-SNAPSHOT @
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-relation
>> -extractor/pom.xml,> MavenProject:
>> org.apache.ctakes:ctakes-distribution:3.1.0-incubating-SNAPSHOT @
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-distribu
>> tion/pom.xml]>
>> projectStarted
>> org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT
>> [INFO]
>>
>> [INFO]
>> ------------------------------------------------------------------------
>> [INFO] Building Apache cTAKES Assertion 3.1.0-incubating-SNAPSHOT
>> [INFO]
>> ------------------------------------------------------------------------
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-type-syste
>> m/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-core/3.1.0
>> -incubating-SNAPSHOT/maven-metadata.xml
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-utils/3.1.
>> 0-incubating-SNAPSHOT/maven-metadata.xml
>> Downloading:
>> http://repository.apache.org/snapshots/junit/junit/maven-metadata.xml
>> Downloading: http://repo1.maven.org/maven2/junit/junit/maven-metadata.xml
>> Downloaded: http://repo1.maven.org/maven2/junit/junit/maven-metadata.xml
>> (868 B at 9.4 KB/sec)
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-pos-tagger
>> /3.1.0-incubating-SNAPSHOT/maven-metadata.xml
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-dependency
>> -parser/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
>> Downloading:
>> http://cleartk.googlecode.com/svn/repo/junit/junit/maven-metadata.xml
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-lvg/3.1.0-
>> incubating-SNAPSHOT/maven-metadata.xml
>> Downloading:
>> http://cleartk.googlecode.com/svn/repo/org/apache/ctakes/ctakes-lvg/3.1.0-
>> incubating-SNAPSHOT/maven-metadata.xml
>> Downloading:
>> http://repository.apache.org/snapshots/com/googlecode/clearparser/clearpar
>> ser/0.4.0-SNAPSHOT/maven-metadata.xml
>> Downloading:
>> http://cleartk.googlecode.com/svn/repo/com/googlecode/clearparser/clearpar
>> ser/0.4.0-SNAPSHOT/maven-metadata.xml
>> Downloaded:
>> http://cleartk.googlecode.com/svn/repo/com/googlecode/clearparser/clearpar
>> ser/0.4.0-SNAPSHOT/maven-metadata.xml (2 KB at 2.4 KB/sec)
>> Downloading:
>> https://oss.sonatype.org/content/repositories/snapshots/junit/junit/maven-
>> metadata.xml
>> Downloaded:
>> https://oss.sonatype.org/content/repositories/snapshots/junit/junit/maven-
>> metadata.xml (369 B at 0.3 KB/sec)
>> Downloading:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-e
>> xamples-0.6.2.pom
>> Downloaded:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-e
>> xamples-0.6.2.pom (5 KB at 12.8 KB/sec)
>> Downloading:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleart
>> k-ml-svmlight-1.1.0.pom
>> Downloaded:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleart
>> k-ml-svmlight-1.1.0.pom (2 KB at 4.2 KB/sec)
>> Downloading:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/clear
>> tk-named-entity-0.6.3.pom
>> Downloaded:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/clear
>> tk-named-entity-0.6.3.pom (3 KB at 6.6 KB/sec)
>> Downloading:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleart
>> k-clearparser-0.7.1.pom
>> Downloaded:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleart
>> k-clearparser-0.7.1.pom (4 KB at 6.3 KB/sec)
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-type-syste
>> m/3.1.0-incubating-SNAPSHOT/ctakes-type-system-3.1.0-incubating-SNAPSHOT.j
>> ar
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-core/3.1.0
>> -incubating-SNAPSHOT/ctakes-core-3.1.0-incubating-SNAPSHOT.jar
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-utils/3.1.
>> 0-incubating-SNAPSHOT/ctakes-utils-3.1.0-incubating-SNAPSHOT.jar
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-pos-tagger
>> /3.1.0-incubating-SNAPSHOT/ctakes-pos-tagger-3.1.0-incubating-SNAPSHOT.jar
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-dependency
>> -parser/3.1.0-incubating-SNAPSHOT/ctakes-dependency-parser-3.1.0-incubatin
>> g-SNAPSHOT.jar
>> Downloading:
>> http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-lvg/3.1.0-
>> incubating-SNAPSHOT/ctakes-lvg-3.1.0-incubating-SNAPSHOT.jar
>> Downloading:
>> http://cleartk.googlecode.com/svn/repo/org/apache/ctakes/ctakes-lvg/3.1.0-
>> incubating-SNAPSHOT/ctakes-lvg-3.1.0-incubating-SNAPSHOT.jar
>> Downloading:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-e
>> xamples-0.6.2.jar
>> Downloading:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleart
>> k-ml-svmlight-1.1.0.jar
>> Downloading:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/clear
>> tk-named-entity-0.6.3.jar
>> Downloading:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleart
>> k-clearparser-0.7.1.jar
>> Downloaded:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/clear
>> tk-named-entity-0.6.3.jar (32 KB at 65.1 KB/sec)
>> Downloaded:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleart
>> k-ml-svmlight-1.1.0.jar (56 KB at 106.0 KB/sec)
>> Downloaded:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-e
>> xamples-0.6.2.jar (4833 KB at 3595.9 KB/sec)
>> Downloaded:
>> http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleart
>> k-clearparser-0.7.1.jar (82652 KB at 19954.5 KB/sec)
>> projectFailed org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT
>> sessionEnded
>> [INFO]
>> ------------------------------------------------------------------------
>> [INFO] Reactor Summary:
>> [INFO]
>> [INFO] Apache cTAKES Assertion ........................... FAILURE
>> [14.784s]
>> [INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED
>> [INFO] Apache cTAKES Relation Extractor .................. SKIPPED
>> [INFO] Apache cTAKES Distribution ........................ SKIPPED
>> [INFO]
>> ------------------------------------------------------------------------
>> [INFO] BUILD FAILURE
>> [INFO]
>> ------------------------------------------------------------------------
>> [INFO] Total time: 20.454s
>> [INFO] Finished at: Tue Oct 30 04:09:09 UTC 2012
>> [INFO] Final Memory: 9M/58M
>> [INFO]
>> ------------------------------------------------------------------------
>> Projects to build: [MavenProject:
>> org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT @
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-assertio
>> n/pom.xml,> MavenProject:
>> org.apache.ctakes:ctakes-clinical-pipeline:3.1.0-incubating-SNAPSHOT @
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-clinical
>> -pipeline/pom.xml,> MavenProject:
>> org.apache.ctakes:ctakes-relation-extractor:3.1.0-incubating-SNAPSHOT @
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-relation
>> -extractor/pom.xml,> MavenProject:
>> org.apache.ctakes:ctakes-distribution:3.1.0-incubating-SNAPSHOT @
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-distribu
>> tion/pom.xml]>
>> [JENKINS] Archiving disabled - not archiving
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-distribu
>> tion/pom.xml>
>> [JENKINS] Archiving disabled - not archiving
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-clinical
>> -pipeline/pom.xml>
>> [JENKINS] Archiving disabled - not archiving
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-assertio
>> n/pom.xml>
>> [JENKINS] Archiving disabled - not archiving
>> <https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-relation
>> -extractor/pom.xml>
>> Waiting for Jenkins to finish collecting data
>> mavenExecutionResult exceptions not empty
>> message : Failed to execute goal on project ctakes-assertion: Could not
>> resolve dependencies for project
>> org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The
>> following artifacts could not be resolved:
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>> find artifact
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>> Nexus (http://repository.apache.org/snapshots)
>> cause : Could not resolve dependencies for project
>> org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The
>> following artifacts could not be resolved:
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>> find artifact
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>> Nexus (http://repository.apache.org/snapshots)
>> Stack trace :
>> org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute
>> goal on project ctakes-assertion: Could not resolve dependencies for
>> project org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT:
>> The following artifacts could not be resolved:
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>> find artifact
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>> Nexus (http://repository.apache.org/snapshots)
>>      at
>> org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDepende
>> ncies(LifecycleDependencyResolver.java:196)
>>      at
>> org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.resolvePro
>> jectDependencies(LifecycleDependencyResolver.java:108)
>>      at
>> org.apache.maven.lifecycle.internal.MojoExecutor.ensureDependenciesAreReso
>> lved(MojoExecutor.java:258)
>>      at
>> org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java
>> :201)
>>      at
>> org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java
>> :153)
>>      at
>> org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java
>> :145)
>>      at
>> org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(Li
>> fecycleModuleBuilder.java:84)
>>      at
>> org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(Li
>> fecycleModuleBuilder.java:59)
>>      at
>> org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(L
>> ifecycleStarter.java:183)
>>      at
>> org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStar
>> ter.java:161)
>>      at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319)
>>      at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156)
>>      at
>> org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:7
>> 9)
>>      at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>      at
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
>> 39)
>>      at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorIm
>> pl.java:25)
>>      at java.lang.reflect.Method.invoke(Method.java:597)
>>      at
>> org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.
>> java:329)
>>      at
>> org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239
>> )
>>      at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158)
>>      at hudson.maven.Maven3Builder.call(Maven3Builder.java:98)
>>      at hudson.maven.Maven3Builder.call(Maven3Builder.java:64)
>>      at hudson.remoting.UserRequest.perform(UserRequest.java:118)
>>      at hudson.remoting.UserRequest.perform(UserRequest.java:48)
>>      at hudson.remoting.Request$2.run(Request.java:326)
>>      at
>> hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorSer
>> vice.java:72)
>>      at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
>>      at java.util.concurrent.FutureTask.run(FutureTask.java:138)
>>      at
>> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.
>> java:886)
>>      at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java
>> :908)
>>      at java.lang.Thread.run(Thread.java:662)
>> Caused by: org.apache.maven.project.DependencyResolutionException: Could
>> not resolve dependencies for project
>> org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The
>> following artifacts could not be resolved:
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>> find artifact
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>> Nexus (http://repository.apache.org/snapshots)
>>      at
>> org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(Defaul
>> tProjectDependenciesResolver.java:170)
>>      at
>> org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDepende
>> ncies(LifecycleDependencyResolver.java:171)
>>      ... 30 more
>> Caused by: org.sonatype.aether.resolution.DependencyResolutionException:
>> The following artifacts could not be resolved:
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>> find artifact
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>> Nexus (http://repository.apache.org/snapshots)
>>      at
>> org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependenc
>> ies(DefaultRepositorySystem.java:412)
>>      at
>> org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(Defaul
>> tProjectDependenciesResolver.java:164)
>>      ... 31 more
>> Caused by: org.sonatype.aether.resolution.ArtifactResolutionException:
>> The following artifacts could not be resolved:
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>> org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>> find artifact
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>> Nexus (http://repository.apache.org/snapshots)
>>      at
>> org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultA
>> rtifactResolver.java:541)
>>      at
>> org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolveArtifacts
>> (DefaultArtifactResolver.java:220)
>>      at
>> org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependenc
>> ies(DefaultRepositorySystem.java:395)
>>      ... 32 more
>> Caused by: org.sonatype.aether.transfer.ArtifactNotFoundException: Could
>> not find artifact
>> org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>> Nexus (http://repository.apache.org/snapshots)
>>      at
>> org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonR
>> epositoryConnector.java:945)
>>      at
>> org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonR
>> epositoryConnector.java:940)
>>      at
>> org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush
>> (WagonRepositoryConnector.java:695)
>>      at
>> org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush
>> (WagonRepositoryConnector.java:689)
>>      at
>> org.sonatype.aether.connector.wagon.WagonRepositoryConnector.get(WagonRepo
>> sitoryConnector.java:445)
>>      at
>> org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultA
>> rtifactResolver.java:460)
>>      ... 34 more
>> Sending e-mails to: ctakes-notifications@incubator.apache.org
>> mattcoarr@gmail.com
>> channel stopped
>

FW: Build failed in Jenkins: cTAKES-trunk-compiletest #35

Posted by "Coarr, Matt" <mc...@mitre.org>.
>From what I can tell, I'm somehow causing the jenkins build
"cTAKES-trunk-compiletest" to fail.

On the command line, I am able to run (from the ctakes root directory):
* mvn clean
* rm -r ~/.m2/repository/org/apache/ctakes
* mvn compile
* mvn clean
* rm -r ~/.m2/repository/org/apache/ctakes
* mvn package


So I'm not sure why this build is failing in jenkins.

I have no outstanding changes other than each module's .classpath and
./settings/org.eclipse.m2e.core.prefs file (which are updated by eclipse,
so they don't match the svn repository).

I even removed all the .classpath and settings/org.eclipse.m2e.core.prefs
files, ran svn update (so now I have a pristine working copy).  Then I
tried "mvn clean" and "mvn compile".  Again, no trouble.

So why is Jenkins failing to build?

Matt


On 2012-10-30 00:10 , "Apache Jenkins Server" <je...@builds.apache.org>
wrote:

>See <https://builds.apache.org/job/cTAKES-trunk-compiletest/35/changes>
>
>Changes:
>
>[mattcoarr] fixed some compilation issues that with the assertion
>evaluation code that were causing problems with some "maven compile"
>builds
>
>------------------------------------------
>Started by an SCM change
>Building remotely on ubuntu4 in workspace
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/>
>Updating http://svn.apache.org/repos/asf/incubator/ctakes/trunk
>A         
>ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleart
>k/TrainAssertionModel.java
>U         
>ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleart
>k/AssertionCleartkAnalysisEngine.java
>A         
>ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleart
>k/AssertionComponents.java
>A         ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval
>A         
>ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/XMIReader.
>java
>A         
>ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionE
>valBasedOnModifier.java
>U         ctakes-assertion/pom.xml
>U         ctakes-ne-contexts/pom.xml
>U         ctakes-pad-term-spotter/pom.xml
>U         ctakes-dependency-parser/pom.xml
>U         ctakes-pos-tagger/pom.xml
>U         ctakes-dictionary-lookup/pom.xml
>U         ctakes-side-effect/pom.xml
>U         ctakes-distribution/pom.xml
>U         ctakes-distribution/RELEASE_NOTES.html
>U         ctakes-coreference/pom.xml
>U         ctakes-constituency-parser/pom.xml
>U         ctakes-clinical-pipeline/pom.xml
>U         pom.xml
>U         ctakes-drug-ner/pom.xml
>U         ctakes-preprocessor/pom.xml
>U         ctakes-relation-extractor/pom.xml
>U         ctakes-core/pom.xml
>U         ctakes-lvg/pom.xml
>U         ctakes-smoking-status/pom.xml
>U         ctakes-context-tokenizer/pom.xml
>U         ctakes-chunker/pom.xml
>U         ctakes-utils/pom.xml
>U         ctakes-type-system/pom.xml
>At revision 1403611
>Parsing POMs
>Modules changed, recalculating dependency graph
>[cTAKES-trunk-compiletest] $ /home/hudson/tools/java/latest1.6/bin/java
>-cp 
>/home/jenkins/jenkins-slave/maven3-agent.jar:/home/hudson/tools/maven/late
>st3/boot/plexus-classworlds-2.4.jar
>org.jvnet.hudson.maven3.agent.Maven3Main /home/hudson/tools/maven/latest3
>/home/jenkins/jenkins-slave/slave.jar
>/home/jenkins/jenkins-slave/maven3-interceptor.jar 58764
><===[JENKINS REMOTING CAPACITY]===>channel started
>   log4j:WARN No appenders could be found for logger
>(org.apache.commons.beanutils.converters.BooleanConverter).
>log4j:WARN Please initialize the log4j system properly.
>Executing Maven:  -B -f
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/pom.xml>
>-Dmaven.repo.local=/home/jenkins/jenkins-slave/maven-repositories/1 -amd
>-pl org.apache.ctakes:ctakes-assertion clean compile test
>[INFO] Scanning for projects...
>[WARNING] 
>[WARNING] Some problems were encountered while building the effective
>model for org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT
>[WARNING] 'dependencies.dependency.systemPath' for
>net.sourceforge.openai:fsm:jar should not point at files within the
>project directory, ${project.basedir}/lib/OpenAI_FSM.jar will be
>unresolvable by dependent projects @ line 82, column 16
>[WARNING] 'dependencies.dependency.systemPath' for
>findstruct:findstruct:jar should not point at files within the project
>directory, ${project.basedir}/lib/FindStructAPI.jar will be unresolvable
>by dependent projects @ line 89, column 16
>[WARNING] 'dependencies.dependency.systemPath' for
>sqlWrapper:sqlWrapper:jar should not point at files within the project
>directory, ${project.basedir}/lib/SQLWrapper.jar will be unresolvable by
>dependent projects @ line 96, column 16
>[WARNING] 
>[WARNING] Some problems were encountered while building the effective
>model for org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT
>[WARNING] 'dependencies.dependency.systemPath' for
>lvg2010dist:lvg2010dist:jar should not point at files within the project
>directory, ${project.basedir}/lib/lvg2010dist.jar will be unresolvable by
>dependent projects @ line 59, column 16
>[WARNING] 
>[WARNING] Some problems were encountered while building the effective
>model for org.apache.ctakes:ctakes-drug-ner:jar:3.1.0-incubating-SNAPSHOT
>[WARNING] 'dependencies.dependency.systemPath' for
>net.sourceforge.openai:fsm:jar should not point at files within the
>project directory, ${project.basedir}/../ctakes-core/lib/OpenAI_FSM.jar
>will be unresolvable by dependent projects @ line 86, column 16
>[WARNING] 
>[WARNING] Some problems were encountered while building the effective
>model for org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT
>[INFO] [WARNING] 
>'dependencies.dependency.(groupId:artifactId:type:classifier)' must be
>unique: junit:junit:jar -> duplicate declaration of version (?) @ line
>146, column 15
>[WARNING] 'dependencies.dependency.systemPath' for
>org.mitre.medfacts:medfacts-i2b2:jar should not point at files within the
>project directory, ${project.basedir}/lib/med-facts-i2b2-1.2-SNAPSHOT.jar
>will be unresolvable by dependent projects @ line 184, column 16
>[WARNING] 'dependencies.dependency.systemPath' for
>org.mitre.medfacts:medfacts-zoner:jar should not point at files within
>the project directory, ${project.basedir}/lib/med-facts-zoner-1.1.jar
>will be unresolvable by dependent projects @ line 191, column 16
>[WARNING] 'dependencies.dependency.systemPath' for
>org.mitre.jcarafe.core:jcarafe.core:jar should not point at files within
>the project directory,
>${project.basedir}/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar will be
>unresolvable by dependent projects @ line 198, column 16
>[WARNING] 'dependencies.dependency.systemPath' for
>org.mitre.jcarafe.ext:jcarafe.ext:jar should not point at files within
>the project directory,
>${project.basedir}/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar will be
>unresolvable by dependent projects @ line 205, column 16
>[WARNING] 
>[WARNING] Some problems were encountered while building the effective
>model for 
>org.apache.ctakes:ctakes-distribution:pom:3.1.0-incubating-SNAPSHOT
>[WARNING] 'dependencies.dependency.(groupId:artifactId:type:classifier)'
>must be unique: org.apache.ctakes:ctakes-ne-contexts:jar -> duplicate
>declaration of version (?) @ line 99, column 15
>[WARNING] 
>[WARNING] It is highly recommended to fix these problems because they
>threaten the stability of your build.
>[WARNING] 
>[WARNING] For this reason, future Maven versions might no longer support
>building such malformed projects.
>[WARNING] 
>------------------------------------------------------------------------
>[INFO] Reactor Build Order:
>[INFO] 
>[INFO] Apache cTAKES Assertion
>[INFO] Apache cTAKES ctakes-clinical-pipeline
>[INFO] Apache cTAKES Relation Extractor
>[INFO] Apache cTAKES Distribution
>Projects to build: [MavenProject:
>org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT @
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-assertio
>n/pom.xml,> MavenProject:
>org.apache.ctakes:ctakes-clinical-pipeline:3.1.0-incubating-SNAPSHOT @
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-clinical
>-pipeline/pom.xml,> MavenProject:
>org.apache.ctakes:ctakes-relation-extractor:3.1.0-incubating-SNAPSHOT @
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-relation
>-extractor/pom.xml,> MavenProject:
>org.apache.ctakes:ctakes-distribution:3.1.0-incubating-SNAPSHOT @
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-distribu
>tion/pom.xml]>
>projectStarted 
>org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT
>[INFO]            
>     
>[INFO] 
>------------------------------------------------------------------------
>[INFO] Building Apache cTAKES Assertion 3.1.0-incubating-SNAPSHOT
>[INFO] 
>------------------------------------------------------------------------
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-type-syste
>m/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-core/3.1.0
>-incubating-SNAPSHOT/maven-metadata.xml
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-utils/3.1.
>0-incubating-SNAPSHOT/maven-metadata.xml
>Downloading: 
>http://repository.apache.org/snapshots/junit/junit/maven-metadata.xml
>Downloading: http://repo1.maven.org/maven2/junit/junit/maven-metadata.xml
>Downloaded: http://repo1.maven.org/maven2/junit/junit/maven-metadata.xml
>(868 B at 9.4 KB/sec)
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-pos-tagger
>/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-dependency
>-parser/3.1.0-incubating-SNAPSHOT/maven-metadata.xml
>Downloading: 
>http://cleartk.googlecode.com/svn/repo/junit/junit/maven-metadata.xml
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-lvg/3.1.0-
>incubating-SNAPSHOT/maven-metadata.xml
>Downloading: 
>http://cleartk.googlecode.com/svn/repo/org/apache/ctakes/ctakes-lvg/3.1.0-
>incubating-SNAPSHOT/maven-metadata.xml
>Downloading: 
>http://repository.apache.org/snapshots/com/googlecode/clearparser/clearpar
>ser/0.4.0-SNAPSHOT/maven-metadata.xml
>Downloading: 
>http://cleartk.googlecode.com/svn/repo/com/googlecode/clearparser/clearpar
>ser/0.4.0-SNAPSHOT/maven-metadata.xml
>Downloaded: 
>http://cleartk.googlecode.com/svn/repo/com/googlecode/clearparser/clearpar
>ser/0.4.0-SNAPSHOT/maven-metadata.xml (2 KB at 2.4 KB/sec)
>Downloading: 
>https://oss.sonatype.org/content/repositories/snapshots/junit/junit/maven-
>metadata.xml
>Downloaded: 
>https://oss.sonatype.org/content/repositories/snapshots/junit/junit/maven-
>metadata.xml (369 B at 0.3 KB/sec)
>Downloading: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-e
>xamples-0.6.2.pom
>Downloaded: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-e
>xamples-0.6.2.pom (5 KB at 12.8 KB/sec)
>Downloading: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleart
>k-ml-svmlight-1.1.0.pom
>Downloaded: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleart
>k-ml-svmlight-1.1.0.pom (2 KB at 4.2 KB/sec)
>Downloading: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/clear
>tk-named-entity-0.6.3.pom
>Downloaded: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/clear
>tk-named-entity-0.6.3.pom (3 KB at 6.6 KB/sec)
>Downloading: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleart
>k-clearparser-0.7.1.pom
>Downloaded: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleart
>k-clearparser-0.7.1.pom (4 KB at 6.3 KB/sec)
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-type-syste
>m/3.1.0-incubating-SNAPSHOT/ctakes-type-system-3.1.0-incubating-SNAPSHOT.j
>ar
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-core/3.1.0
>-incubating-SNAPSHOT/ctakes-core-3.1.0-incubating-SNAPSHOT.jar
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-utils/3.1.
>0-incubating-SNAPSHOT/ctakes-utils-3.1.0-incubating-SNAPSHOT.jar
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-pos-tagger
>/3.1.0-incubating-SNAPSHOT/ctakes-pos-tagger-3.1.0-incubating-SNAPSHOT.jar
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-dependency
>-parser/3.1.0-incubating-SNAPSHOT/ctakes-dependency-parser-3.1.0-incubatin
>g-SNAPSHOT.jar
>Downloading: 
>http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-lvg/3.1.0-
>incubating-SNAPSHOT/ctakes-lvg-3.1.0-incubating-SNAPSHOT.jar
>Downloading: 
>http://cleartk.googlecode.com/svn/repo/org/apache/ctakes/ctakes-lvg/3.1.0-
>incubating-SNAPSHOT/ctakes-lvg-3.1.0-incubating-SNAPSHOT.jar
>Downloading: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-e
>xamples-0.6.2.jar
>Downloading: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleart
>k-ml-svmlight-1.1.0.jar
>Downloading: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/clear
>tk-named-entity-0.6.3.jar
>Downloading: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleart
>k-clearparser-0.7.1.jar
>Downloaded: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-named-entity/0.6.3/clear
>tk-named-entity-0.6.3.jar (32 KB at 65.1 KB/sec)
>Downloaded: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-ml-svmlight/1.1.0/cleart
>k-ml-svmlight-1.1.0.jar (56 KB at 106.0 KB/sec)
>Downloaded: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-examples/0.6.2/cleartk-e
>xamples-0.6.2.jar (4833 KB at 3595.9 KB/sec)
>Downloaded: 
>http://repo1.maven.org/maven2/org/cleartk/cleartk-clearparser/0.7.1/cleart
>k-clearparser-0.7.1.jar (82652 KB at 19954.5 KB/sec)
>projectFailed org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT
>sessionEnded
>[INFO] 
>------------------------------------------------------------------------
>[INFO] Reactor Summary:
>[INFO] 
>[INFO] Apache cTAKES Assertion ........................... FAILURE
>[14.784s]
>[INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED
>[INFO] Apache cTAKES Relation Extractor .................. SKIPPED
>[INFO] Apache cTAKES Distribution ........................ SKIPPED
>[INFO] 
>------------------------------------------------------------------------
>[INFO] BUILD FAILURE
>[INFO] 
>------------------------------------------------------------------------
>[INFO] Total time: 20.454s
>[INFO] Finished at: Tue Oct 30 04:09:09 UTC 2012
>[INFO] Final Memory: 9M/58M
>[INFO] 
>------------------------------------------------------------------------
>Projects to build: [MavenProject:
>org.apache.ctakes:ctakes-assertion:3.1.0-incubating-SNAPSHOT @
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-assertio
>n/pom.xml,> MavenProject:
>org.apache.ctakes:ctakes-clinical-pipeline:3.1.0-incubating-SNAPSHOT @
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-clinical
>-pipeline/pom.xml,> MavenProject:
>org.apache.ctakes:ctakes-relation-extractor:3.1.0-incubating-SNAPSHOT @
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-relation
>-extractor/pom.xml,> MavenProject:
>org.apache.ctakes:ctakes-distribution:3.1.0-incubating-SNAPSHOT @
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-distribu
>tion/pom.xml]>
>[JENKINS] Archiving disabled - not archiving
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-distribu
>tion/pom.xml>
>[JENKINS] Archiving disabled - not archiving
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-clinical
>-pipeline/pom.xml>
>[JENKINS] Archiving disabled - not archiving
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-assertio
>n/pom.xml>
>[JENKINS] Archiving disabled - not archiving
><https://builds.apache.org/job/cTAKES-trunk-compiletest/ws/ctakes-relation
>-extractor/pom.xml>
>Waiting for Jenkins to finish collecting data
>mavenExecutionResult exceptions not empty
>message : Failed to execute goal on project ctakes-assertion: Could not
>resolve dependencies for project
>org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The
>following artifacts could not be resolved:
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>find artifact 
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>Nexus (http://repository.apache.org/snapshots)
>cause : Could not resolve dependencies for project
>org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The
>following artifacts could not be resolved:
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>find artifact 
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>Nexus (http://repository.apache.org/snapshots)
>Stack trace : 
>org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute
>goal on project ctakes-assertion: Could not resolve dependencies for
>project org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT:
>The following artifacts could not be resolved:
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>find artifact 
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>Nexus (http://repository.apache.org/snapshots)
>	at 
>org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDepende
>ncies(LifecycleDependencyResolver.java:196)
>	at 
>org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.resolvePro
>jectDependencies(LifecycleDependencyResolver.java:108)
>	at 
>org.apache.maven.lifecycle.internal.MojoExecutor.ensureDependenciesAreReso
>lved(MojoExecutor.java:258)
>	at 
>org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java
>:201)
>	at 
>org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java
>:153)
>	at 
>org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java
>:145)
>	at 
>org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(Li
>fecycleModuleBuilder.java:84)
>	at 
>org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(Li
>fecycleModuleBuilder.java:59)
>	at 
>org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(L
>ifecycleStarter.java:183)
>	at 
>org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStar
>ter.java:161)
>	at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319)
>	at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156)
>	at 
>org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:7
>9)
>	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>	at 
>sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
>39)
>	at 
>sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorIm
>pl.java:25)
>	at java.lang.reflect.Method.invoke(Method.java:597)
>	at 
>org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.
>java:329)
>	at 
>org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239
>)
>	at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158)
>	at hudson.maven.Maven3Builder.call(Maven3Builder.java:98)
>	at hudson.maven.Maven3Builder.call(Maven3Builder.java:64)
>	at hudson.remoting.UserRequest.perform(UserRequest.java:118)
>	at hudson.remoting.UserRequest.perform(UserRequest.java:48)
>	at hudson.remoting.Request$2.run(Request.java:326)
>	at 
>hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorSer
>vice.java:72)
>	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
>	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
>	at 
>java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.
>java:886)
>	at 
>java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java
>:908)
>	at java.lang.Thread.run(Thread.java:662)
>Caused by: org.apache.maven.project.DependencyResolutionException: Could
>not resolve dependencies for project
>org.apache.ctakes:ctakes-assertion:jar:3.1.0-incubating-SNAPSHOT: The
>following artifacts could not be resolved:
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>find artifact 
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>Nexus (http://repository.apache.org/snapshots)
>	at 
>org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(Defaul
>tProjectDependenciesResolver.java:170)
>	at 
>org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDepende
>ncies(LifecycleDependencyResolver.java:171)
>	... 30 more
>Caused by: org.sonatype.aether.resolution.DependencyResolutionException:
>The following artifacts could not be resolved:
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>find artifact 
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>Nexus (http://repository.apache.org/snapshots)
>	at 
>org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependenc
>ies(DefaultRepositorySystem.java:412)
>	at 
>org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(Defaul
>tProjectDependenciesResolver.java:164)
>	... 31 more
>Caused by: org.sonatype.aether.resolution.ArtifactResolutionException:
>The following artifacts could not be resolved:
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-core:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-utils:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-pos-tagger:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-dependency-parser:jar:3.1.0-incubating-SNAPSHOT,
>org.apache.ctakes:ctakes-lvg:jar:3.1.0-incubating-SNAPSHOT: Could not
>find artifact 
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>Nexus (http://repository.apache.org/snapshots)
>	at 
>org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultA
>rtifactResolver.java:541)
>	at 
>org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolveArtifacts
>(DefaultArtifactResolver.java:220)
>	at 
>org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependenc
>ies(DefaultRepositorySystem.java:395)
>	... 32 more
>Caused by: org.sonatype.aether.transfer.ArtifactNotFoundException: Could
>not find artifact 
>org.apache.ctakes:ctakes-type-system:jar:3.1.0-incubating-SNAPSHOT in
>Nexus (http://repository.apache.org/snapshots)
>	at 
>org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonR
>epositoryConnector.java:945)
>	at 
>org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonR
>epositoryConnector.java:940)
>	at 
>org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush
>(WagonRepositoryConnector.java:695)
>	at 
>org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush
>(WagonRepositoryConnector.java:689)
>	at 
>org.sonatype.aether.connector.wagon.WagonRepositoryConnector.get(WagonRepo
>sitoryConnector.java:445)
>	at 
>org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultA
>rtifactResolver.java:460)
>	... 34 more
>Sending e-mails to: ctakes-notifications@incubator.apache.org
>mattcoarr@gmail.com
>channel stopped