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Posted to issues@flink.apache.org by GitBox <gi...@apache.org> on 2019/02/21 11:41:34 UTC

[GitHub] twalthr commented on a change in pull request #7777: [FLINK-9964][table] Add a full RFC-compliant CSV table format factory

twalthr commented on a change in pull request #7777:  [FLINK-9964][table] Add a full RFC-compliant CSV table format factory
URL: https://github.com/apache/flink/pull/7777#discussion_r258891532
 
 

 ##########
 File path: flink-formats/flink-csv/src/main/java/org/apache/flink/formats/csv/CsvRowDeserializationSchema.java
 ##########
 @@ -0,0 +1,268 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.apache.flink.formats.csv;
+
+import org.apache.flink.annotation.PublicEvolving;
+import org.apache.flink.api.common.serialization.DeserializationSchema;
+import org.apache.flink.api.common.typeinfo.BasicArrayTypeInfo;
+import org.apache.flink.api.common.typeinfo.PrimitiveArrayTypeInfo;
+import org.apache.flink.api.common.typeinfo.TypeInformation;
+import org.apache.flink.api.common.typeinfo.Types;
+import org.apache.flink.api.java.typeutils.ObjectArrayTypeInfo;
+import org.apache.flink.api.java.typeutils.RowTypeInfo;
+import org.apache.flink.types.Row;
+import org.apache.flink.util.Preconditions;
+
+import org.apache.flink.shaded.jackson2.com.fasterxml.jackson.databind.JsonNode;
+import org.apache.flink.shaded.jackson2.com.fasterxml.jackson.databind.ObjectReader;
+import org.apache.flink.shaded.jackson2.com.fasterxml.jackson.databind.node.TextNode;
+import org.apache.flink.shaded.jackson2.com.fasterxml.jackson.dataformat.csv.CsvMapper;
+import org.apache.flink.shaded.jackson2.com.fasterxml.jackson.dataformat.csv.CsvSchema;
+
+import java.io.IOException;
+import java.lang.reflect.Array;
+import java.math.BigDecimal;
+import java.math.BigInteger;
+import java.sql.Date;
+import java.sql.Time;
+import java.sql.Timestamp;
+import java.util.Arrays;
+import java.util.Objects;
+
+/**
+ * Deserialization schema from CSV to Flink types.
+ *
+ * <p>Deserializes a <code>byte[]</code> message as a {@link JsonNode} and
+ * converts it to {@link Row}.
+ *
+ * <p>Failure during deserialization are forwarded as wrapped {@link IOException}s.
+ */
+@PublicEvolving
+public final class CsvRowDeserializationSchema implements DeserializationSchema<Row> {
+
+	private static final long serialVersionUID = 2135553495874539201L;
+
+	/** Type information describing the result type. */
+	private final TypeInformation<Row> typeInfo;
+
+	/** Schema describing the input CSV data. */
+	private CsvSchema csvSchema;
+
+	/** Object reader used to read rows. It is configured by {@link CsvSchema}. */
+	private ObjectReader objectReader;
+
+	/** Flag indicating whether to ignore invalid fields/rows (default: throw an exception). */
+	private boolean ignoreParseErrors;
+
+	/**
+	 * Create a CSV deserialization schema for the given {@link TypeInformation}.
+	 */
+	public CsvRowDeserializationSchema(TypeInformation<Row> typeInfo) {
+		Preconditions.checkNotNull(typeInfo, "Type information must not be null.");
+		this.typeInfo = typeInfo;
+
+		if (!(typeInfo instanceof RowTypeInfo)) {
+			throw new IllegalArgumentException("Row type information expected.");
+		}
+
+		this.csvSchema = CsvRowSchemaConverter.convert((RowTypeInfo) typeInfo);
+		this.objectReader = new CsvMapper().readerFor(JsonNode.class).with(csvSchema);
+	}
+
+	@Override
+	public Row deserialize(byte[] message) throws IOException {
+		try {
+			final JsonNode root = objectReader.readValue(message);
+			return convertRow(root, (RowTypeInfo) typeInfo, true);
+		} catch (Throwable t) {
+			if (ignoreParseErrors) {
+				return null;
+			}
+			throw new IOException("Failed to deserialize CSV row '" + new String(message) + "'.", t);
+		}
+	}
+
+	@Override
+	public boolean isEndOfStream(Row nextElement) {
+		return false;
+	}
+
+	@Override
+	public TypeInformation<Row> getProducedType() {
+		return typeInfo;
+	}
+
+	public void setFieldDelimiter(char c) {
+		this.csvSchema = this.csvSchema.rebuild().setColumnSeparator(c).build();
+		this.objectReader = objectReader.with(csvSchema);
+	}
+
+	public void setAllowComments(boolean allowComments) {
+		this.csvSchema = this.csvSchema.rebuild().setAllowComments(allowComments).build();
+		this.objectReader = objectReader.with(csvSchema);
+	}
+
+	public void setArrayElementDelimiter(String s) {
+		this.csvSchema = this.csvSchema.rebuild().setArrayElementSeparator(s).build();
+		this.objectReader = objectReader.with(csvSchema);
+	}
+
+	public void setQuoteCharacter(char c) {
+		this.csvSchema = this.csvSchema.rebuild().setQuoteChar(c).build();
+		this.objectReader = objectReader.with(csvSchema);
+	}
+
+	public void setEscapeCharacter(char c) {
+		this.csvSchema = this.csvSchema.rebuild().setEscapeChar(c).build();
+		this.objectReader = objectReader.with(csvSchema);
+	}
+
+	public void setNullLiteral(String s) {
+		this.csvSchema = this.csvSchema.rebuild().setNullValue(s).build();
+		this.objectReader = objectReader.with(csvSchema);
+	}
+
+	public void setIgnoreParseErrors(boolean ignoreParseErrors) {
+		this.ignoreParseErrors = ignoreParseErrors;
+	}
+
+	@Override
+	public boolean equals(Object o) {
+		if (this == o) {
+			return true;
+		}
+		if (o == null || o.getClass() != this.getClass()) {
+			return false;
+		}
+		final CsvRowDeserializationSchema that = (CsvRowDeserializationSchema) o;
+		final CsvSchema otherSchema = that.csvSchema;
+
+		return typeInfo.equals(that.typeInfo) &&
+			ignoreParseErrors == that.ignoreParseErrors &&
+			csvSchema.getColumnSeparator() == otherSchema.getColumnSeparator() &&
+			csvSchema.allowsComments() == otherSchema.allowsComments() &&
+			csvSchema.getArrayElementSeparator().equals(otherSchema.getArrayElementSeparator()) &&
+			csvSchema.getQuoteChar() == otherSchema.getQuoteChar() &&
+			csvSchema.getEscapeChar() == otherSchema.getEscapeChar() &&
+			Arrays.equals(csvSchema.getNullValue(), otherSchema.getNullValue());
+	}
+
+	@Override
+	public int hashCode() {
+		return Objects.hash(
+			typeInfo,
+			ignoreParseErrors,
+			csvSchema.getColumnSeparator(),
+			csvSchema.allowsComments(),
+			csvSchema.getArrayElementSeparator(),
+			csvSchema.getQuoteChar(),
+			csvSchema.getEscapeChar(),
+			csvSchema.getNullValue());
+	}
+
+	// --------------------------------------------------------------------------------------------
+
+	private Object convert(JsonNode node, TypeInformation<?> info) {
+		if (info == Types.VOID || node.isNull()) {
+			return null;
+		} else if (info == Types.STRING) {
+			return node.asText();
+		} else if (info == Types.BOOLEAN) {
+			return Boolean.valueOf(node.asText().trim());
+		} else if (info == Types.BYTE) {
+			return Byte.valueOf(node.asText().trim());
+		} else if (info == Types.SHORT) {
+			return Short.valueOf(node.asText().trim());
+		} else if (info == Types.INT) {
+			return Integer.valueOf(node.asText().trim());
+		} else if (info == Types.LONG) {
+			return Long.valueOf(node.asText().trim());
+		} else if (info == Types.FLOAT) {
+			return Float.valueOf(node.asText().trim());
+		} else if (info == Types.DOUBLE) {
+			return Double.valueOf(node.asText().trim());
+		} else if (info == Types.BIG_DEC) {
+			return new BigDecimal(node.asText().trim());
+		} else if (info == Types.BIG_INT) {
+			return new BigInteger(node.asText().trim());
+		} else if (info == Types.SQL_DATE) {
+			return Date.valueOf(node.asText());
+		} else if (info == Types.SQL_TIME) {
+			return Time.valueOf(node.asText());
+		} else if (info == Types.SQL_TIMESTAMP) {
+			return Timestamp.valueOf(node.asText());
+		} else if (info instanceof RowTypeInfo) {
+			return convertRow(node, (RowTypeInfo) info, false);
+		} else if (info instanceof BasicArrayTypeInfo) {
+			return convertObjectArray(node, ((BasicArrayTypeInfo) info).getComponentInfo());
+		} else if (info instanceof ObjectArrayTypeInfo) {
+			return convertObjectArray(node, ((ObjectArrayTypeInfo) info).getComponentInfo());
+		} else if (info instanceof PrimitiveArrayTypeInfo &&
+				((PrimitiveArrayTypeInfo) info).getComponentType() == Types.BYTE) {
+			return convertByteArray((TextNode) node);
+		} else {
+			throw new RuntimeException("Unsupported type information '" + info + "' for node: " + node);
+		}
+	}
+
+	private Row convertRow(JsonNode node, RowTypeInfo info, boolean mapByName) {
 
 Review comment:
   This is due to a weird Jackson behavior. The index getter does not work.

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