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Posted to issues@arrow.apache.org by "tdhock (via GitHub)" <gi...@apache.org> on 2023/05/11 22:45:43 UTC
[GitHub] [arrow] tdhock opened a new issue, #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
tdhock opened a new issue, #35566:
URL: https://github.com/apache/arrow/issues/35566
### Describe the bug, including details regarding any error messages, version, and platform.
Hi! I'm trying to install libarrow C++ from source, and then install R package from source. I expected that this should be possible without having to manually set environment variables ARROW_PARQUET and ARROW_CSV, but I found that I have to set them in order for R package installation to succeed, so I believe this may be a bug.
maybe similar to https://github.com/apache/arrow/issues/27825 ?
In detail I have cloned arrow from github, and built C++ libarrow from source via code below,
```
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main)$ CC=$HOME/bin/gcc CXX=$HOME/bin/g++ cmake .. --preset ninja-debug-basic -DCMAKE_INSTALL_PREFIX=$HOME -DARROW_CXXFLAGS=-march=core2 -DARROW_PARQUET=ON
Preset CMake variables:
ARROW_BUILD_INTEGRATION="ON"
ARROW_BUILD_STATIC="OFF"
ARROW_BUILD_TESTS="ON"
ARROW_COMPUTE="ON"
ARROW_CSV="ON"
ARROW_DATASET="ON"
ARROW_EXTRA_ERROR_CONTEXT="ON"
ARROW_FILESYSTEM="ON"
ARROW_JSON="ON"
ARROW_WITH_RE2="OFF"
ARROW_WITH_UTF8PROC="OFF"
CMAKE_BUILD_TYPE="Debug"
-- Building using CMake version: 3.22.1
-- Arrow version: 13.0.0 (full: '13.0.0-SNAPSHOT')
-- Arrow SO version: 1300 (full: 1300.0.0)
...
-- Outputting build configuration summary to /home/tdhock/arrow-git/cpp/build/cmake_summary.json
-- Configuring done
-- Generating done
-- Build files have been written to: /home/tdhock/arrow-git/cpp/build
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main)$ cmake --build .
[0/1] Re-running CMake...
-- Building using CMake version: 3.22.1
-- Arrow version: 13.0.0 (full: '13.0.0-SNAPSHOT')
-- Arrow SO version: 1300 (full: 1300.0.0)
...
-- Outputting build configuration summary to /home/tdhock/arrow-git/cpp/build/cmake_summary.json
-- Configuring done
-- Generating done
-- Build files have been written to: /home/tdhock/arrow-git/cpp/build
[1/365] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/io/buffered.cc.o
[2/365] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/io/caching.cc.o
...
[364/365] Building CXX object src/parquet/CMakeFiles/parquet-arrow-test.dir/arrow/arrow_reader_writer_test.cc.o
[365/365] Linking CXX executable debug/parquet-arrow-test
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main)$ cmake --install .
-- Install configuration: "DEBUG"
-- Installing: /home/tdhock/lib/cmake/Arrow/FindThriftAlt.cmake
-- Installing: /home/tdhock/include/arrow/util/config.h
...
-- Installing: /home/tdhock/include/parquet/encryption/test_in_memory_kms.h
-- Installing: /home/tdhock/include/parquet/encryption/two_level_cache_with_expiration.h
```
The code above builds libarrow and installs it under my home directory. The code below then tries to install the R package, using the system libarrow I compiled above.
```
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main)$ ARROW_DEPENDENCY_SOURCE=SYSTEM ARROW_R_DEV=true LIBARROW_BINARY=false PKG_CONFIG_PATH=$HOME/lib/pkgconfig R CMD INSTALL ../../r
Loading required package: grDevices
* installing to library ‘/home/tdhock/lib/R/library’
* installing *source* package ‘arrow’ ...
** using staged installation
*** Generating code with data-raw/codegen.R
Loading required package: grDevices
Error in library(decor) : there is no package called ‘decor’
Calls: suppressPackageStartupMessages -> withCallingHandlers -> library
Execution halted
*** Trying Arrow C++ found by pkg-config: /home/tdhock
*** > Packages are both on development versions (13.0.0-SNAPSHOT, 12.0.0.9000)
*** > If installation fails, rebuild the C++ library to match the R version
*** > or retry with FORCE_BUNDLED_BUILD=true
PKG_CFLAGS=-I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON
PKG_LIBS=-L/home/tdhock/lib -larrow_acero -larrow_dataset -lparquet -larrow
** libs
using C++ compiler: ‘g++ (GCC) 10.1.0’
using C++17
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c arrowExports.cpp -o arrowExports.o
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c bridge.cpp -o bridge.o
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c buffer.cpp -o buffer.o
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c chunkedarray.cpp -o chunkedarray.o
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c compression.cpp -o compression.o
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c compute-exec.cpp -o compute-exec.o
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c compute.cpp -o compute.o
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c config.cpp -o config.o
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c csv.cpp -o csv.o
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c dataset.cpp -o dataset.o
dataset.cpp: In function ‘std::shared_ptr<arrow::dataset::ParquetFileFormat> dataset___ParquetFileFormat__Make(const std::shared_ptr<arrow::dataset::ParquetFragmentScanOptions>&, cpp11::strings)’:
dataset.cpp:229:6: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFileFormat’ {aka ‘class arrow::dataset::ParquetFileFormat’}
229 | fmt->default_fragment_scan_options = std::move(options);
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:80:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFileFormat’ {aka ‘class arrow::dataset::ParquetFileFormat’}
80 | class ParquetFileFormat;
| ^~~~~~~~~~~~~~~~~
dataset.cpp:232:16: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFileFormat’ {aka ‘class arrow::dataset::ParquetFileFormat’}
232 | auto& d = fmt->reader_options.dict_columns;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:80:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFileFormat’ {aka ‘class arrow::dataset::ParquetFileFormat’}
80 | class ParquetFileFormat;
| ^~~~~~~~~~~~~~~~~
dataset.cpp: In function ‘void dataset___ParquetFileWriteOptions__update(const std::shared_ptr<arrow::dataset::ParquetFileWriteOptions>&, const std::shared_ptr<parquet::WriterProperties>&, const std::shared_ptr<parquet::ArrowWriterProperties>&)’:
dataset.cpp:251:10: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFileWriteOptions’ {aka ‘class arrow::dataset::ParquetFileWriteOptions’}
251 | options->writer_properties = writer_props;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:84:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFileWriteOptions’ {aka ‘class arrow::dataset::ParquetFileWriteOptions’}
84 | class ParquetFileWriteOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:252:10: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFileWriteOptions’ {aka ‘class arrow::dataset::ParquetFileWriteOptions’}
252 | options->arrow_writer_properties = arrow_writer_props;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:84:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFileWriteOptions’ {aka ‘class arrow::dataset::ParquetFileWriteOptions’}
84 | class ParquetFileWriteOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp: In function ‘void dataset___CsvFileWriteOptions__update(const std::shared_ptr<arrow::dataset::CsvFileWriteOptions>&, const std::shared_ptr<arrow::csv::WriteOptions>&)’:
dataset.cpp:278:15: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::CsvFileWriteOptions’ {aka ‘class arrow::dataset::CsvFileWriteOptions’}
278 | *csv_options->write_options = *write_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:72:7: note: forward declaration of ‘using element_type = class arrow::dataset::CsvFileWriteOptions’ {aka ‘class arrow::dataset::CsvFileWriteOptions’}
72 | class CsvFileWriteOptions;
| ^~~~~~~~~~~~~~~~~~~
dataset.cpp: In function ‘std::shared_ptr<arrow::dataset::CsvFileFormat> dataset___CsvFileFormat__Make(const std::shared_ptr<arrow::csv::ParseOptions>&, const std::shared_ptr<arrow::csv::ConvertOptions>&, const std::shared_ptr<arrow::csv::ReadOptions>&)’:
dataset.cpp:292:9: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::CsvFileFormat’ {aka ‘class arrow::dataset::CsvFileFormat’}
292 | format->parse_options = *parse_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:70:7: note: forward declaration of ‘using element_type = class arrow::dataset::CsvFileFormat’ {aka ‘class arrow::dataset::CsvFileFormat’}
70 | class CsvFileFormat;
| ^~~~~~~~~~~~~
dataset.cpp:294:36: error: invalid use of incomplete type ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
294 | if (convert_options) scan_options->convert_options = *convert_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:73:8: note: forward declaration of ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
73 | struct CsvFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:295:33: error: invalid use of incomplete type ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
295 | if (read_options) scan_options->read_options = *read_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:73:8: note: forward declaration of ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
73 | struct CsvFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:296:9: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::CsvFileFormat’ {aka ‘class arrow::dataset::CsvFileFormat’}
296 | format->default_fragment_scan_options = std::move(scan_options);
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:70:7: note: forward declaration of ‘using element_type = class arrow::dataset::CsvFileFormat’ {aka ‘class arrow::dataset::CsvFileFormat’}
70 | class CsvFileFormat;
| ^~~~~~~~~~~~~
dataset.cpp: In function ‘std::shared_ptr<arrow::dataset::CsvFragmentScanOptions> dataset___CsvFragmentScanOptions__Make(const std::shared_ptr<arrow::csv::ConvertOptions>&, const std::shared_ptr<arrow::csv::ReadOptions>&)’:
dataset.cpp:313:10: error: invalid use of incomplete type ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
313 | options->convert_options = *convert_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:73:8: note: forward declaration of ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
73 | struct CsvFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:314:10: error: invalid use of incomplete type ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
314 | options->read_options = *read_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:73:8: note: forward declaration of ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
73 | struct CsvFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~
dataset.cpp: In function ‘std::shared_ptr<arrow::dataset::ParquetFragmentScanOptions> dataset___ParquetFragmentScanOptions__Make(bool, int64_t, bool)’:
dataset.cpp:324:12: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
324 | options->reader_properties->enable_buffered_stream();
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:326:12: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
326 | options->reader_properties->disable_buffered_stream();
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:328:10: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
328 | options->reader_properties->set_buffer_size(buffer_size);
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:329:10: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
329 | options->arrow_reader_properties->set_pre_buffer(pre_buffer);
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:331:12: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
331 | options->arrow_reader_properties->set_cache_options(
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:56,
from /home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:52,
from /home/tdhock/include/c++/10.1.0/memory:84,
from ././arrow_cpp11.h:20,
from ./arrow_types.h:22,
from dataset.cpp:18:
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h: In instantiation of ‘struct __gnu_cxx::__aligned_buffer<arrow::dataset::ParquetFileFormat>’:
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:538:35: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::ParquetFileFormat, std::allocator<arrow::dataset::ParquetFileFormat>, __gnu_cxx::_S_atomic>::_Impl’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:599:13: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::ParquetFileFormat, std::allocator<arrow::dataset::ParquetFileFormat>, __gnu_cxx::_S_atomic>’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:679:43: required from ‘std::__shared_count<_Lp>::__shared_count(_Tp*&, std::_Sp_alloc_shared_tag<_Alloc>, _Args&& ...) [with _Tp = arrow::dataset::ParquetFileFormat; _Alloc = std::allocator<arrow::dataset::ParquetFileFormat>; _Args = {}; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:1371:71: required from ‘std::__shared_ptr<_Tp, _Lp>::__shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::ParquetFileFormat>; _Args = {}; _Tp = arrow::dataset::ParquetFileFormat; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:408:59: required from ‘std::shared_ptr<_Tp>::shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::ParquetFileFormat>; _Args = {}; _Tp = arrow::dataset::ParquetFileFormat]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:859:14: required from ‘std::shared_ptr<_Tp> std::allocate_shared(const _Alloc&, _Args&& ...) [with _Tp = arrow::dataset::ParquetFileFormat; _Alloc = std::allocator<arrow::dataset::ParquetFileFormat>; _Args = {}]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:875:39: required from ‘std::shared_ptr<_Tp> std::make_shared(_Args&& ...) [with _Tp = arrow::dataset::ParquetFileFormat; _Args = {}]’
dataset.cpp:228:54: required from here
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::ParquetFileFormat’
91 | : std::aligned_storage<sizeof(_Tp), __alignof__(_Tp)>
| ^~~~~~~~~~~
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::ParquetFileFormat’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h: In instantiation of ‘struct __gnu_cxx::__aligned_buffer<arrow::dataset::CsvFileFormat>’:
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:538:35: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::CsvFileFormat, std::allocator<arrow::dataset::CsvFileFormat>, __gnu_cxx::_S_atomic>::_Impl’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:599:13: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::CsvFileFormat, std::allocator<arrow::dataset::CsvFileFormat>, __gnu_cxx::_S_atomic>’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:679:43: required from ‘std::__shared_count<_Lp>::__shared_count(_Tp*&, std::_Sp_alloc_shared_tag<_Alloc>, _Args&& ...) [with _Tp = arrow::dataset::CsvFileFormat; _Alloc = std::allocator<arrow::dataset::CsvFileFormat>; _Args = {}; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:1371:71: required from ‘std::__shared_ptr<_Tp, _Lp>::__shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::CsvFileFormat>; _Args = {}; _Tp = arrow::dataset::CsvFileFormat; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:408:59: required from ‘std::shared_ptr<_Tp>::shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::CsvFileFormat>; _Args = {}; _Tp = arrow::dataset::CsvFileFormat]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:859:14: required from ‘std::shared_ptr<_Tp> std::allocate_shared(const _Alloc&, _Args&& ...) [with _Tp = arrow::dataset::CsvFileFormat; _Alloc = std::allocator<arrow::dataset::CsvFileFormat>; _Args = {}]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:875:39: required from ‘std::shared_ptr<_Tp> std::make_shared(_Args&& ...) [with _Tp = arrow::dataset::CsvFileFormat; _Args = {}]’
dataset.cpp:291:53: required from here
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::CsvFileFormat’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::CsvFileFormat’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h: In instantiation of ‘struct __gnu_cxx::__aligned_buffer<arrow::dataset::CsvFragmentScanOptions>’:
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:538:35: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::CsvFragmentScanOptions, std::allocator<arrow::dataset::CsvFragmentScanOptions>, __gnu_cxx::_S_atomic>::_Impl’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:599:13: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::CsvFragmentScanOptions, std::allocator<arrow::dataset::CsvFragmentScanOptions>, __gnu_cxx::_S_atomic>’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:679:43: required from ‘std::__shared_count<_Lp>::__shared_count(_Tp*&, std::_Sp_alloc_shared_tag<_Alloc>, _Args&& ...) [with _Tp = arrow::dataset::CsvFragmentScanOptions; _Alloc = std::allocator<arrow::dataset::CsvFragmentScanOptions>; _Args = {}; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:1371:71: required from ‘std::__shared_ptr<_Tp, _Lp>::__shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::CsvFragmentScanOptions>; _Args = {}; _Tp = arrow::dataset::CsvFragmentScanOptions; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:408:59: required from ‘std::shared_ptr<_Tp>::shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::CsvFragmentScanOptions>; _Args = {}; _Tp = arrow::dataset::CsvFragmentScanOptions]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:859:14: required from ‘std::shared_ptr<_Tp> std::allocate_shared(const _Alloc&, _Args&& ...) [with _Tp = arrow::dataset::CsvFragmentScanOptions; _Alloc = std::allocator<arrow::dataset::CsvFragmentScanOptions>; _Args = {}]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:875:39: required from ‘std::shared_ptr<_Tp> std::make_shared(_Args&& ...) [with _Tp = arrow::dataset::CsvFragmentScanOptions; _Args = {}]’
dataset.cpp:293:68: required from here
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::CsvFragmentScanOptions’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::CsvFragmentScanOptions’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h: In instantiation of ‘struct __gnu_cxx::__aligned_buffer<arrow::dataset::ParquetFragmentScanOptions>’:
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:538:35: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::ParquetFragmentScanOptions, std::allocator<arrow::dataset::ParquetFragmentScanOptions>, __gnu_cxx::_S_atomic>::_Impl’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:599:13: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::ParquetFragmentScanOptions, std::allocator<arrow::dataset::ParquetFragmentScanOptions>, __gnu_cxx::_S_atomic>’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:679:43: required from ‘std::__shared_count<_Lp>::__shared_count(_Tp*&, std::_Sp_alloc_shared_tag<_Alloc>, _Args&& ...) [with _Tp = arrow::dataset::ParquetFragmentScanOptions; _Alloc = std::allocator<arrow::dataset::ParquetFragmentScanOptions>; _Args = {}; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:1371:71: required from ‘std::__shared_ptr<_Tp, _Lp>::__shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::ParquetFragmentScanOptions>; _Args = {}; _Tp = arrow::dataset::ParquetFragmentScanOptions; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:408:59: required from ‘std::shared_ptr<_Tp>::shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::ParquetFragmentScanOptions>; _Args = {}; _Tp = arrow::dataset::ParquetFragmentScanOptions]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:859:14: required from ‘std::shared_ptr<_Tp> std::allocate_shared(const _Alloc&, _Args&& ...) [with _Tp = arrow::dataset::ParquetFragmentScanOptions; _Alloc = std::allocator<arrow::dataset::ParquetFragmentScanOptions>; _Args = {}]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:875:39: required from ‘std::shared_ptr<_Tp> std::make_shared(_Args&& ...) [with _Tp = arrow::dataset::ParquetFragmentScanOptions; _Args = {}]’
dataset.cpp:322:67: required from here
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::ParquetFragmentScanOptions’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::ParquetFragmentScanOptions’
/home/tdhock/lib/R/etc/Makeconf:198: recipe for target 'dataset.o' failed
make: *** [dataset.o] Error 1
ERROR: compilation failed for package ‘arrow’
* removing ‘/home/tdhock/lib/R/library/arrow’
* restoring previous ‘/home/tdhock/lib/R/library/arrow’
```
The output above indicates that there is a missing include.
Notice that the g++ command that failed, g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c dataset.cpp -o dataset.o, is missing -DARROW_PARQUET -DARROW_CSV. If those two definitions are present then this command line works fine, because the the right header files are included from here, https://github.com/apache/arrow/blob/14f9bf923a5655c04130a2db0cabe15a0249dd79/cpp/src/arrow/dataset/api.h
The above suggests there is some missing logic in the header files. Something like: if ARROW_R_WITH_PARQUET is defined, then ARROW_PARQUET should be defined as well, so we can get those header files when we need them, etc.
### Component(s)
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[GitHub] [arrow] tdhock commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "tdhock (via GitHub)" <gi...@apache.org>.
tdhock commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1545861999
```
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main)$ cmake --install .
-- Install configuration: "DEBUG"
-- Up-to-date: /home/tdhock/lib/cmake/Arrow/FindThriftAlt.cmake
-- Installing: /home/tdhock/include/arrow/util/config.h
-- Up-to-date: /home/tdhock/share/doc/arrow/LICENSE.txt
-- Up-to-date: /home/tdhock/share/doc/arrow/NOTICE.txt
-- Up-to-date: /home/tdhock/share/doc/arrow/README.md
-- Up-to-date: /home/tdhock/share/arrow/gdb/gdb_arrow.py
-- Up-to-date: /home/tdhock/lib/libarrow.so.1300.0.0
-- Up-to-date: /home/tdhock/lib/libarrow.so.1300
-- Up-to-date: /home/tdhock/lib/libarrow.so
-- Up-to-date: /home/tdhock/lib/cmake/Arrow/ArrowConfig.cmake
-- Up-to-date: /home/tdhock/lib/cmake/Arrow/ArrowConfigVersion.cmake
-- Up-to-date: /home/tdhock/lib/cmake/Arrow/ArrowTargets.cmake
-- Up-to-date: /home/tdhock/lib/cmake/Arrow/ArrowTargets-debug.cmake
-- Up-to-date: /home/tdhock/lib/pkgconfig/arrow.pc
-- Up-to-date: /home/tdhock/share/gdb/auto-load/home/tdhock/lib/$<TARGET_FILE_NAME:arrow_shared>-gdb.py
-- Up-to-date: /home/tdhock/lib/libarrow_testing.so.1300.0.0
-- Up-to-date: /home/tdhock/lib/libarrow_testing.so.1300
-- Up-to-date: /home/tdhock/lib/libarrow_testing.so
-- Up-to-date: /home/tdhock/lib/cmake/ArrowTesting/ArrowTestingConfig.cmake
-- Up-to-date: /home/tdhock/lib/cmake/ArrowTesting/ArrowTestingConfigVersion.cmake
-- Up-to-date: /home/tdhock/lib/cmake/ArrowTesting/ArrowTestingTargets.cmake
-- Up-to-date: /home/tdhock/lib/cmake/ArrowTesting/ArrowTestingTargets-debug.cmake
-- Up-to-date: /home/tdhock/lib/pkgconfig/arrow-testing.pc
-- Up-to-date: /home/tdhock/include/arrow/api.h
-- Up-to-date: /home/tdhock/include/arrow/array.h
-- Up-to-date: /home/tdhock/include/arrow/buffer.h
-- Up-to-date: /home/tdhock/include/arrow/buffer_builder.h
-- Up-to-date: /home/tdhock/include/arrow/builder.h
-- Up-to-date: /home/tdhock/include/arrow/chunk_resolver.h
-- Up-to-date: /home/tdhock/include/arrow/chunked_array.h
-- Up-to-date: /home/tdhock/include/arrow/compare.h
-- Up-to-date: /home/tdhock/include/arrow/config.h
-- Up-to-date: /home/tdhock/include/arrow/datum.h
-- Up-to-date: /home/tdhock/include/arrow/device.h
-- Up-to-date: /home/tdhock/include/arrow/extension_type.h
-- Up-to-date: /home/tdhock/include/arrow/memory_pool.h
-- Up-to-date: /home/tdhock/include/arrow/memory_pool_test.h
-- Up-to-date: /home/tdhock/include/arrow/pch.h
-- Up-to-date: /home/tdhock/include/arrow/pretty_print.h
-- Up-to-date: /home/tdhock/include/arrow/record_batch.h
-- Up-to-date: /home/tdhock/include/arrow/result.h
-- Up-to-date: /home/tdhock/include/arrow/scalar.h
-- Up-to-date: /home/tdhock/include/arrow/sparse_tensor.h
-- Up-to-date: /home/tdhock/include/arrow/status.h
-- Up-to-date: /home/tdhock/include/arrow/stl.h
-- Up-to-date: /home/tdhock/include/arrow/stl_allocator.h
-- Up-to-date: /home/tdhock/include/arrow/stl_iterator.h
-- Up-to-date: /home/tdhock/include/arrow/table.h
-- Up-to-date: /home/tdhock/include/arrow/table_builder.h
-- Up-to-date: /home/tdhock/include/arrow/tensor.h
-- Up-to-date: /home/tdhock/include/arrow/type.h
-- Up-to-date: /home/tdhock/include/arrow/type_fwd.h
-- Up-to-date: /home/tdhock/include/arrow/type_traits.h
-- Up-to-date: /home/tdhock/include/arrow/visit_array_inline.h
-- Up-to-date: /home/tdhock/include/arrow/visit_data_inline.h
-- Up-to-date: /home/tdhock/include/arrow/visit_scalar_inline.h
-- Up-to-date: /home/tdhock/include/arrow/visit_type_inline.h
-- Up-to-date: /home/tdhock/include/arrow/visitor.h
-- Up-to-date: /home/tdhock/include/arrow/visitor_generate.h
-- Up-to-date: /home/tdhock/lib/cmake/Arrow/ArrowOptions.cmake
-- Up-to-date: /home/tdhock/lib/cmake/Arrow/arrow-config.cmake
-- Up-to-date: /home/tdhock/include/arrow/testing/async_test_util.h
-- Up-to-date: /home/tdhock/include/arrow/testing/builder.h
-- Up-to-date: /home/tdhock/include/arrow/testing/executor_util.h
-- Up-to-date: /home/tdhock/include/arrow/testing/extension_type.h
-- Up-to-date: /home/tdhock/include/arrow/testing/future_util.h
-- Up-to-date: /home/tdhock/include/arrow/testing/generator.h
-- Up-to-date: /home/tdhock/include/arrow/testing/gtest_compat.h
-- Up-to-date: /home/tdhock/include/arrow/testing/gtest_util.h
-- Up-to-date: /home/tdhock/include/arrow/testing/json_integration.h
-- Up-to-date: /home/tdhock/include/arrow/testing/matchers.h
-- Up-to-date: /home/tdhock/include/arrow/testing/pch.h
-- Up-to-date: /home/tdhock/include/arrow/testing/random.h
-- Up-to-date: /home/tdhock/include/arrow/testing/uniform_real.h
-- Up-to-date: /home/tdhock/include/arrow/testing/util.h
-- Up-to-date: /home/tdhock/include/arrow/testing/visibility.h
-- Up-to-date: /home/tdhock/include/arrow/array/array_base.h
-- Up-to-date: /home/tdhock/include/arrow/array/array_binary.h
-- Up-to-date: /home/tdhock/include/arrow/array/array_decimal.h
-- Up-to-date: /home/tdhock/include/arrow/array/array_dict.h
-- Up-to-date: /home/tdhock/include/arrow/array/array_nested.h
-- Up-to-date: /home/tdhock/include/arrow/array/array_primitive.h
-- Up-to-date: /home/tdhock/include/arrow/array/array_run_end.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_adaptive.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_base.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_binary.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_decimal.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_dict.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_nested.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_primitive.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_run_end.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_time.h
-- Up-to-date: /home/tdhock/include/arrow/array/builder_union.h
-- Up-to-date: /home/tdhock/include/arrow/array/concatenate.h
-- Up-to-date: /home/tdhock/include/arrow/array/data.h
-- Up-to-date: /home/tdhock/include/arrow/array/diff.h
-- Up-to-date: /home/tdhock/include/arrow/array/util.h
-- Up-to-date: /home/tdhock/include/arrow/array/validate.h
-- Up-to-date: /home/tdhock/include/arrow/c/abi.h
-- Up-to-date: /home/tdhock/include/arrow/c/bridge.h
-- Up-to-date: /home/tdhock/include/arrow/c/helpers.h
-- Up-to-date: /home/tdhock/include/arrow/compute/api.h
-- Up-to-date: /home/tdhock/include/arrow/compute/api_aggregate.h
-- Up-to-date: /home/tdhock/include/arrow/compute/api_scalar.h
-- Up-to-date: /home/tdhock/include/arrow/compute/api_vector.h
-- Up-to-date: /home/tdhock/include/arrow/compute/cast.h
-- Up-to-date: /home/tdhock/include/arrow/compute/exec.h
-- Up-to-date: /home/tdhock/include/arrow/compute/expression.h
-- Up-to-date: /home/tdhock/include/arrow/compute/function.h
-- Up-to-date: /home/tdhock/include/arrow/compute/kernel.h
-- Up-to-date: /home/tdhock/include/arrow/compute/key_hash.h
-- Up-to-date: /home/tdhock/include/arrow/compute/key_map.h
-- Up-to-date: /home/tdhock/include/arrow/compute/light_array.h
-- Up-to-date: /home/tdhock/include/arrow/compute/ordering.h
-- Up-to-date: /home/tdhock/include/arrow/compute/registry.h
-- Up-to-date: /home/tdhock/include/arrow/compute/type_fwd.h
-- Up-to-date: /home/tdhock/include/arrow/compute/util.h
-- Up-to-date: /home/tdhock/lib/pkgconfig/arrow-compute.pc
-- Up-to-date: /home/tdhock/include/arrow/compute/row/grouper.h
-- Up-to-date: /home/tdhock/include/arrow/io/api.h
-- Up-to-date: /home/tdhock/include/arrow/io/buffered.h
-- Up-to-date: /home/tdhock/include/arrow/io/caching.h
-- Up-to-date: /home/tdhock/include/arrow/io/compressed.h
-- Up-to-date: /home/tdhock/include/arrow/io/concurrency.h
-- Up-to-date: /home/tdhock/include/arrow/io/file.h
-- Up-to-date: /home/tdhock/include/arrow/io/hdfs.h
-- Up-to-date: /home/tdhock/include/arrow/io/interfaces.h
-- Up-to-date: /home/tdhock/include/arrow/io/memory.h
-- Up-to-date: /home/tdhock/include/arrow/io/mman.h
-- Up-to-date: /home/tdhock/include/arrow/io/slow.h
-- Up-to-date: /home/tdhock/include/arrow/io/stdio.h
-- Up-to-date: /home/tdhock/include/arrow/io/test_common.h
-- Up-to-date: /home/tdhock/include/arrow/io/transform.h
-- Up-to-date: /home/tdhock/include/arrow/io/type_fwd.h
-- Up-to-date: /home/tdhock/include/arrow/tensor/converter.h
-- Up-to-date: /home/tdhock/include/arrow/util/algorithm.h
-- Up-to-date: /home/tdhock/include/arrow/util/align_util.h
-- Up-to-date: /home/tdhock/include/arrow/util/aligned_storage.h
-- Up-to-date: /home/tdhock/include/arrow/util/async_generator.h
-- Up-to-date: /home/tdhock/include/arrow/util/async_generator_fwd.h
-- Up-to-date: /home/tdhock/include/arrow/util/async_util.h
-- Up-to-date: /home/tdhock/include/arrow/util/base64.h
-- Up-to-date: /home/tdhock/include/arrow/util/basic_decimal.h
-- Up-to-date: /home/tdhock/include/arrow/util/benchmark_util.h
-- Up-to-date: /home/tdhock/include/arrow/util/bit_block_counter.h
-- Up-to-date: /home/tdhock/include/arrow/util/bit_run_reader.h
-- Up-to-date: /home/tdhock/include/arrow/util/bit_stream_utils.h
-- Up-to-date: /home/tdhock/include/arrow/util/bit_util.h
-- Up-to-date: /home/tdhock/include/arrow/util/bitmap.h
-- Up-to-date: /home/tdhock/include/arrow/util/bitmap_builders.h
-- Up-to-date: /home/tdhock/include/arrow/util/bitmap_generate.h
-- Up-to-date: /home/tdhock/include/arrow/util/bitmap_ops.h
-- Up-to-date: /home/tdhock/include/arrow/util/bitmap_reader.h
-- Up-to-date: /home/tdhock/include/arrow/util/bitmap_visit.h
-- Up-to-date: /home/tdhock/include/arrow/util/bitmap_writer.h
-- Up-to-date: /home/tdhock/include/arrow/util/bitset_stack.h
-- Up-to-date: /home/tdhock/include/arrow/util/bpacking.h
-- Up-to-date: /home/tdhock/include/arrow/util/bpacking64_default.h
-- Up-to-date: /home/tdhock/include/arrow/util/bpacking_avx2.h
-- Up-to-date: /home/tdhock/include/arrow/util/bpacking_avx512.h
-- Up-to-date: /home/tdhock/include/arrow/util/bpacking_default.h
-- Up-to-date: /home/tdhock/include/arrow/util/bpacking_neon.h
-- Up-to-date: /home/tdhock/include/arrow/util/bpacking_simd128_generated.h
-- Up-to-date: /home/tdhock/include/arrow/util/bpacking_simd256_generated.h
-- Up-to-date: /home/tdhock/include/arrow/util/bpacking_simd512_generated.h
-- Up-to-date: /home/tdhock/include/arrow/util/byte_size.h
-- Up-to-date: /home/tdhock/include/arrow/util/byte_stream_split.h
-- Up-to-date: /home/tdhock/include/arrow/util/bytes_view.h
-- Up-to-date: /home/tdhock/include/arrow/util/cancel.h
-- Up-to-date: /home/tdhock/include/arrow/util/checked_cast.h
-- Up-to-date: /home/tdhock/include/arrow/util/compare.h
-- Up-to-date: /home/tdhock/include/arrow/util/compression.h
-- Up-to-date: /home/tdhock/include/arrow/util/concurrent_map.h
-- Installing: /home/tdhock/include/arrow/util/config.h
-- Up-to-date: /home/tdhock/include/arrow/util/converter.h
-- Up-to-date: /home/tdhock/include/arrow/util/counting_semaphore.h
-- Up-to-date: /home/tdhock/include/arrow/util/cpu_info.h
-- Up-to-date: /home/tdhock/include/arrow/util/crc32.h
-- Up-to-date: /home/tdhock/include/arrow/util/debug.h
-- Up-to-date: /home/tdhock/include/arrow/util/decimal.h
-- Up-to-date: /home/tdhock/include/arrow/util/delimiting.h
-- Up-to-date: /home/tdhock/include/arrow/util/dispatch.h
-- Up-to-date: /home/tdhock/include/arrow/util/double_conversion.h
-- Up-to-date: /home/tdhock/include/arrow/util/endian.h
-- Up-to-date: /home/tdhock/include/arrow/util/formatting.h
-- Up-to-date: /home/tdhock/include/arrow/util/functional.h
-- Up-to-date: /home/tdhock/include/arrow/util/future.h
-- Up-to-date: /home/tdhock/include/arrow/util/hash_util.h
-- Up-to-date: /home/tdhock/include/arrow/util/hashing.h
-- Up-to-date: /home/tdhock/include/arrow/util/int_util.h
-- Up-to-date: /home/tdhock/include/arrow/util/int_util_overflow.h
-- Up-to-date: /home/tdhock/include/arrow/util/io_util.h
-- Up-to-date: /home/tdhock/include/arrow/util/iterator.h
-- Up-to-date: /home/tdhock/include/arrow/util/key_value_metadata.h
-- Up-to-date: /home/tdhock/include/arrow/util/launder.h
-- Up-to-date: /home/tdhock/include/arrow/util/logging.h
-- Up-to-date: /home/tdhock/include/arrow/util/macros.h
-- Up-to-date: /home/tdhock/include/arrow/util/map.h
-- Up-to-date: /home/tdhock/include/arrow/util/math_constants.h
-- Up-to-date: /home/tdhock/include/arrow/util/memory.h
-- Up-to-date: /home/tdhock/include/arrow/util/mutex.h
-- Up-to-date: /home/tdhock/include/arrow/util/parallel.h
-- Up-to-date: /home/tdhock/include/arrow/util/pcg_random.h
-- Up-to-date: /home/tdhock/include/arrow/util/print.h
-- Up-to-date: /home/tdhock/include/arrow/util/queue.h
-- Up-to-date: /home/tdhock/include/arrow/util/range.h
-- Up-to-date: /home/tdhock/include/arrow/util/ree_util.h
-- Up-to-date: /home/tdhock/include/arrow/util/regex.h
-- Up-to-date: /home/tdhock/include/arrow/util/rle_encoding.h
-- Up-to-date: /home/tdhock/include/arrow/util/rows_to_batches.h
-- Up-to-date: /home/tdhock/include/arrow/util/simd.h
-- Up-to-date: /home/tdhock/include/arrow/util/small_vector.h
-- Up-to-date: /home/tdhock/include/arrow/util/sort.h
-- Up-to-date: /home/tdhock/include/arrow/util/spaced.h
-- Up-to-date: /home/tdhock/include/arrow/util/stopwatch.h
-- Up-to-date: /home/tdhock/include/arrow/util/string.h
-- Up-to-date: /home/tdhock/include/arrow/util/string_builder.h
-- Up-to-date: /home/tdhock/include/arrow/util/task_group.h
-- Up-to-date: /home/tdhock/include/arrow/util/tdigest.h
-- Up-to-date: /home/tdhock/include/arrow/util/test_common.h
-- Up-to-date: /home/tdhock/include/arrow/util/thread_pool.h
-- Up-to-date: /home/tdhock/include/arrow/util/time.h
-- Up-to-date: /home/tdhock/include/arrow/util/tracing.h
-- Up-to-date: /home/tdhock/include/arrow/util/trie.h
-- Up-to-date: /home/tdhock/include/arrow/util/type_fwd.h
-- Up-to-date: /home/tdhock/include/arrow/util/type_traits.h
-- Up-to-date: /home/tdhock/include/arrow/util/ubsan.h
-- Up-to-date: /home/tdhock/include/arrow/util/union_util.h
-- Up-to-date: /home/tdhock/include/arrow/util/unreachable.h
-- Up-to-date: /home/tdhock/include/arrow/util/uri.h
-- Up-to-date: /home/tdhock/include/arrow/util/utf8.h
-- Up-to-date: /home/tdhock/include/arrow/util/value_parsing.h
-- Up-to-date: /home/tdhock/include/arrow/util/vector.h
-- Up-to-date: /home/tdhock/include/arrow/util/visibility.h
-- Up-to-date: /home/tdhock/include/arrow/util/windows_compatibility.h
-- Up-to-date: /home/tdhock/include/arrow/util/windows_fixup.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/ProducerConsumerQueue.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/datetime.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/strptime.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/xxhash.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/datetime/date.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/datetime/ios.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/datetime/tz.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/datetime/tz_private.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/datetime/visibility.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/bignum-dtoa.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/bignum.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/cached-powers.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/diy-fp.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/double-conversion.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/fast-dtoa.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/fixed-dtoa.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/ieee.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/strtod.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/double-conversion/utils.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/pcg/pcg_extras.hpp
-- Up-to-date: /home/tdhock/include/arrow/vendored/pcg/pcg_random.hpp
-- Up-to-date: /home/tdhock/include/arrow/vendored/pcg/pcg_uint128.hpp
-- Up-to-date: /home/tdhock/include/arrow/vendored/portable-snippets/debug-trap.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/portable-snippets/safe-math.h
-- Up-to-date: /home/tdhock/include/arrow/vendored/xxhash/xxhash.h
-- Up-to-date: /home/tdhock/include/arrow/csv/api.h
-- Up-to-date: /home/tdhock/include/arrow/csv/chunker.h
-- Up-to-date: /home/tdhock/include/arrow/csv/column_builder.h
-- Up-to-date: /home/tdhock/include/arrow/csv/column_decoder.h
-- Up-to-date: /home/tdhock/include/arrow/csv/converter.h
-- Up-to-date: /home/tdhock/include/arrow/csv/invalid_row.h
-- Up-to-date: /home/tdhock/include/arrow/csv/options.h
-- Up-to-date: /home/tdhock/include/arrow/csv/parser.h
-- Up-to-date: /home/tdhock/include/arrow/csv/reader.h
-- Up-to-date: /home/tdhock/include/arrow/csv/test_common.h
-- Up-to-date: /home/tdhock/include/arrow/csv/type_fwd.h
-- Up-to-date: /home/tdhock/include/arrow/csv/writer.h
-- Up-to-date: /home/tdhock/lib/pkgconfig/arrow-csv.pc
-- Up-to-date: /home/tdhock/include/arrow/acero/accumulation_queue.h
-- Up-to-date: /home/tdhock/include/arrow/acero/aggregate_node.h
-- Up-to-date: /home/tdhock/include/arrow/acero/asof_join_node.h
-- Up-to-date: /home/tdhock/include/arrow/acero/benchmark_util.h
-- Up-to-date: /home/tdhock/include/arrow/acero/bloom_filter.h
-- Up-to-date: /home/tdhock/include/arrow/acero/exec_plan.h
-- Up-to-date: /home/tdhock/include/arrow/acero/groupby.h
-- Up-to-date: /home/tdhock/include/arrow/acero/hash_join.h
-- Up-to-date: /home/tdhock/include/arrow/acero/hash_join_dict.h
-- Up-to-date: /home/tdhock/include/arrow/acero/hash_join_node.h
-- Up-to-date: /home/tdhock/include/arrow/acero/map_node.h
-- Up-to-date: /home/tdhock/include/arrow/acero/options.h
-- Up-to-date: /home/tdhock/include/arrow/acero/order_by_impl.h
-- Up-to-date: /home/tdhock/include/arrow/acero/partition_util.h
-- Up-to-date: /home/tdhock/include/arrow/acero/pch.h
-- Up-to-date: /home/tdhock/include/arrow/acero/query_context.h
-- Up-to-date: /home/tdhock/include/arrow/acero/schema_util.h
-- Up-to-date: /home/tdhock/include/arrow/acero/task_util.h
-- Up-to-date: /home/tdhock/include/arrow/acero/test_nodes.h
-- Up-to-date: /home/tdhock/include/arrow/acero/tpch_node.h
-- Up-to-date: /home/tdhock/include/arrow/acero/type_fwd.h
-- Up-to-date: /home/tdhock/include/arrow/acero/util.h
-- Up-to-date: /home/tdhock/include/arrow/acero/visibility.h
-- Up-to-date: /home/tdhock/lib/libarrow_acero.so.1300.0.0
-- Up-to-date: /home/tdhock/lib/libarrow_acero.so.1300
-- Up-to-date: /home/tdhock/lib/libarrow_acero.so
-- Up-to-date: /home/tdhock/lib/cmake/ArrowAcero/ArrowAceroConfig.cmake
-- Up-to-date: /home/tdhock/lib/cmake/ArrowAcero/ArrowAceroConfigVersion.cmake
-- Up-to-date: /home/tdhock/lib/cmake/ArrowAcero/ArrowAceroTargets.cmake
-- Up-to-date: /home/tdhock/lib/cmake/ArrowAcero/ArrowAceroTargets-debug.cmake
-- Up-to-date: /home/tdhock/lib/pkgconfig/arrow-acero.pc
-- Installing: /home/tdhock/include/arrow/dataset/api.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/dataset.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/dataset_writer.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/discovery.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/file_base.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/file_csv.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/file_ipc.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/file_json.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/file_orc.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/file_parquet.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/partition.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/pch.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/plan.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/projector.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/scanner.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/type_fwd.h
-- Up-to-date: /home/tdhock/include/arrow/dataset/visibility.h
-- Up-to-date: /home/tdhock/lib/libarrow_dataset.so.1300.0.0
-- Up-to-date: /home/tdhock/lib/libarrow_dataset.so.1300
-- Up-to-date: /home/tdhock/lib/libarrow_dataset.so
-- Up-to-date: /home/tdhock/lib/cmake/ArrowDataset/ArrowDatasetConfig.cmake
-- Up-to-date: /home/tdhock/lib/cmake/ArrowDataset/ArrowDatasetConfigVersion.cmake
-- Up-to-date: /home/tdhock/lib/cmake/ArrowDataset/ArrowDatasetTargets.cmake
-- Up-to-date: /home/tdhock/lib/cmake/ArrowDataset/ArrowDatasetTargets-debug.cmake
-- Up-to-date: /home/tdhock/lib/pkgconfig/arrow-dataset.pc
-- Up-to-date: /home/tdhock/include/arrow/filesystem/api.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/filesystem.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/gcsfs.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/hdfs.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/localfs.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/mockfs.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/path_util.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/s3_test_util.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/s3fs.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/test_util.h
-- Up-to-date: /home/tdhock/include/arrow/filesystem/type_fwd.h
-- Up-to-date: /home/tdhock/lib/pkgconfig/arrow-filesystem.pc
-- Up-to-date: /home/tdhock/include/arrow/ipc/api.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/dictionary.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/feather.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/json_simple.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/message.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/options.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/reader.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/test_common.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/type_fwd.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/util.h
-- Up-to-date: /home/tdhock/include/arrow/ipc/writer.h
-- Up-to-date: /home/tdhock/include/arrow/json/api.h
-- Up-to-date: /home/tdhock/include/arrow/json/chunked_builder.h
-- Up-to-date: /home/tdhock/include/arrow/json/chunker.h
-- Up-to-date: /home/tdhock/include/arrow/json/converter.h
-- Up-to-date: /home/tdhock/include/arrow/json/object_parser.h
-- Up-to-date: /home/tdhock/include/arrow/json/object_writer.h
-- Up-to-date: /home/tdhock/include/arrow/json/options.h
-- Up-to-date: /home/tdhock/include/arrow/json/parser.h
-- Up-to-date: /home/tdhock/include/arrow/json/rapidjson_defs.h
-- Up-to-date: /home/tdhock/include/arrow/json/reader.h
-- Up-to-date: /home/tdhock/include/arrow/json/test_common.h
-- Up-to-date: /home/tdhock/include/arrow/json/type_fwd.h
-- Up-to-date: /home/tdhock/lib/pkgconfig/arrow-json.pc
-- Up-to-date: /home/tdhock/include/arrow/extension/fixed_shape_tensor.h
-- Up-to-date: /home/tdhock/lib/libparquet.so.1300.0.0
-- Up-to-date: /home/tdhock/lib/libparquet.so.1300
-- Up-to-date: /home/tdhock/lib/libparquet.so
-- Up-to-date: /home/tdhock/lib/cmake/Parquet/ParquetConfig.cmake
-- Up-to-date: /home/tdhock/lib/cmake/Parquet/ParquetConfigVersion.cmake
-- Up-to-date: /home/tdhock/lib/cmake/Parquet/ParquetTargets.cmake
-- Up-to-date: /home/tdhock/lib/cmake/Parquet/ParquetTargets-debug.cmake
-- Up-to-date: /home/tdhock/lib/pkgconfig/parquet.pc
-- Up-to-date: /home/tdhock/include/parquet/bloom_filter.h
-- Up-to-date: /home/tdhock/include/parquet/bloom_filter_reader.h
-- Up-to-date: /home/tdhock/include/parquet/column_page.h
-- Up-to-date: /home/tdhock/include/parquet/column_reader.h
-- Up-to-date: /home/tdhock/include/parquet/column_scanner.h
-- Up-to-date: /home/tdhock/include/parquet/column_writer.h
-- Up-to-date: /home/tdhock/include/parquet/encoding.h
-- Up-to-date: /home/tdhock/include/parquet/exception.h
-- Up-to-date: /home/tdhock/include/parquet/file_reader.h
-- Up-to-date: /home/tdhock/include/parquet/file_writer.h
-- Up-to-date: /home/tdhock/include/parquet/hasher.h
-- Up-to-date: /home/tdhock/include/parquet/level_comparison.h
-- Up-to-date: /home/tdhock/include/parquet/level_comparison_inc.h
-- Up-to-date: /home/tdhock/include/parquet/level_conversion.h
-- Up-to-date: /home/tdhock/include/parquet/level_conversion_inc.h
-- Up-to-date: /home/tdhock/include/parquet/metadata.h
-- Up-to-date: /home/tdhock/include/parquet/page_index.h
-- Up-to-date: /home/tdhock/include/parquet/pch.h
-- Up-to-date: /home/tdhock/include/parquet/platform.h
-- Up-to-date: /home/tdhock/include/parquet/printer.h
-- Up-to-date: /home/tdhock/include/parquet/properties.h
-- Up-to-date: /home/tdhock/include/parquet/schema.h
-- Up-to-date: /home/tdhock/include/parquet/statistics.h
-- Up-to-date: /home/tdhock/include/parquet/stream_reader.h
-- Up-to-date: /home/tdhock/include/parquet/stream_writer.h
-- Up-to-date: /home/tdhock/include/parquet/test_util.h
-- Up-to-date: /home/tdhock/include/parquet/type_fwd.h
-- Up-to-date: /home/tdhock/include/parquet/types.h
-- Up-to-date: /home/tdhock/include/parquet/windows_compatibility.h
-- Up-to-date: /home/tdhock/include/parquet/windows_fixup.h
-- Up-to-date: /home/tdhock/include/parquet/xxhasher.h
-- Up-to-date: /home/tdhock/include/parquet/parquet_version.h
-- Up-to-date: /home/tdhock/include/parquet/api/io.h
-- Up-to-date: /home/tdhock/include/parquet/api/reader.h
-- Up-to-date: /home/tdhock/include/parquet/api/schema.h
-- Up-to-date: /home/tdhock/include/parquet/api/writer.h
-- Up-to-date: /home/tdhock/include/parquet/arrow/reader.h
-- Up-to-date: /home/tdhock/include/parquet/arrow/schema.h
-- Up-to-date: /home/tdhock/include/parquet/arrow/test_util.h
-- Up-to-date: /home/tdhock/include/parquet/arrow/writer.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/crypto_factory.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/encryption.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/file_key_material_store.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/file_key_unwrapper.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/file_key_wrapper.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/file_system_key_material_store.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/key_encryption_key.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/key_material.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/key_metadata.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/key_toolkit.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/kms_client.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/kms_client_factory.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/local_wrap_kms_client.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/test_encryption_util.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/test_in_memory_kms.h
-- Up-to-date: /home/tdhock/include/parquet/encryption/two_level_cache_with_expiration.h
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main*)$ ARROW_PARQUET=true ARROW_R_WITH_PARQUET=true ARROW_DEPENDENCY_SOURCE=SYSTEM ARROW_R_DEV=true LIBARROW_BINARY=false PKG_CONFIG_PATH=$HOME/lib/pkgconfig:$CONDA_PREFIX/lib/pkgconfig R CMD INSTALL ../../r
Loading required package: grDevices
* installing to library ‘/home/tdhock/lib/R/library’
* installing *source* package ‘arrow’ ...
** using staged installation
*** Generating code with data-raw/codegen.R
Loading required package: grDevices
Error in library(decor) : there is no package called ‘decor’
Calls: suppressPackageStartupMessages -> withCallingHandlers -> library
Execution halted
*** Trying Arrow C++ found by pkg-config: /home/tdhock
*** > Packages are both on development versions (13.0.0-SNAPSHOT, 12.0.0.9000)
*** > If installation fails, rebuild the C++ library to match the R version
*** > or retry with FORCE_BUNDLED_BUILD=true
PKG_CFLAGS=-I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON
PKG_LIBS=-L/home/tdhock/lib -larrow_acero -larrow_dataset -lparquet -larrow
** libs
using C++ compiler: ‘g++ (GCC) 10.1.0’
using C++17
g++ -std=gnu++17 -I"/home/tdhock/lib/R/include" -DNDEBUG -I/home/tdhock/include -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO -DARROW_R_WITH_JSON -I'/home/tdhock/lib/R/library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c dataset.cpp -o dataset.o
dataset.cpp: In function ‘std::shared_ptr<arrow::dataset::ParquetFileFormat> dataset___ParquetFileFormat__Make(const std::shared_ptr<arrow::dataset::ParquetFragmentScanOptions>&, cpp11::strings)’:
dataset.cpp:229:6: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFileFormat’ {aka ‘class arrow::dataset::ParquetFileFormat’}
229 | fmt->default_fragment_scan_options = std::move(options);
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:80:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFileFormat’ {aka ‘class arrow::dataset::ParquetFileFormat’}
80 | class ParquetFileFormat;
| ^~~~~~~~~~~~~~~~~
dataset.cpp:232:16: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFileFormat’ {aka ‘class arrow::dataset::ParquetFileFormat’}
232 | auto& d = fmt->reader_options.dict_columns;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:80:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFileFormat’ {aka ‘class arrow::dataset::ParquetFileFormat’}
80 | class ParquetFileFormat;
| ^~~~~~~~~~~~~~~~~
dataset.cpp: In function ‘void dataset___ParquetFileWriteOptions__update(const std::shared_ptr<arrow::dataset::ParquetFileWriteOptions>&, const std::shared_ptr<parquet::WriterProperties>&, const std::shared_ptr<parquet::ArrowWriterProperties>&)’:
dataset.cpp:251:10: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFileWriteOptions’ {aka ‘class arrow::dataset::ParquetFileWriteOptions’}
251 | options->writer_properties = writer_props;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:84:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFileWriteOptions’ {aka ‘class arrow::dataset::ParquetFileWriteOptions’}
84 | class ParquetFileWriteOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:252:10: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFileWriteOptions’ {aka ‘class arrow::dataset::ParquetFileWriteOptions’}
252 | options->arrow_writer_properties = arrow_writer_props;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:84:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFileWriteOptions’ {aka ‘class arrow::dataset::ParquetFileWriteOptions’}
84 | class ParquetFileWriteOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp: In function ‘void dataset___CsvFileWriteOptions__update(const std::shared_ptr<arrow::dataset::CsvFileWriteOptions>&, const std::shared_ptr<arrow::csv::WriteOptions>&)’:
dataset.cpp:278:15: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::CsvFileWriteOptions’ {aka ‘class arrow::dataset::CsvFileWriteOptions’}
278 | *csv_options->write_options = *write_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:72:7: note: forward declaration of ‘using element_type = class arrow::dataset::CsvFileWriteOptions’ {aka ‘class arrow::dataset::CsvFileWriteOptions’}
72 | class CsvFileWriteOptions;
| ^~~~~~~~~~~~~~~~~~~
dataset.cpp: In function ‘std::shared_ptr<arrow::dataset::CsvFileFormat> dataset___CsvFileFormat__Make(const std::shared_ptr<arrow::csv::ParseOptions>&, const std::shared_ptr<arrow::csv::ConvertOptions>&, const std::shared_ptr<arrow::csv::ReadOptions>&)’:
dataset.cpp:292:9: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::CsvFileFormat’ {aka ‘class arrow::dataset::CsvFileFormat’}
292 | format->parse_options = *parse_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:70:7: note: forward declaration of ‘using element_type = class arrow::dataset::CsvFileFormat’ {aka ‘class arrow::dataset::CsvFileFormat’}
70 | class CsvFileFormat;
| ^~~~~~~~~~~~~
dataset.cpp:294:36: error: invalid use of incomplete type ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
294 | if (convert_options) scan_options->convert_options = *convert_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:73:8: note: forward declaration of ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
73 | struct CsvFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:295:33: error: invalid use of incomplete type ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
295 | if (read_options) scan_options->read_options = *read_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:73:8: note: forward declaration of ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
73 | struct CsvFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:296:9: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::CsvFileFormat’ {aka ‘class arrow::dataset::CsvFileFormat’}
296 | format->default_fragment_scan_options = std::move(scan_options);
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:70:7: note: forward declaration of ‘using element_type = class arrow::dataset::CsvFileFormat’ {aka ‘class arrow::dataset::CsvFileFormat’}
70 | class CsvFileFormat;
| ^~~~~~~~~~~~~
dataset.cpp: In function ‘std::shared_ptr<arrow::dataset::CsvFragmentScanOptions> dataset___CsvFragmentScanOptions__Make(const std::shared_ptr<arrow::csv::ConvertOptions>&, const std::shared_ptr<arrow::csv::ReadOptions>&)’:
dataset.cpp:313:10: error: invalid use of incomplete type ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
313 | options->convert_options = *convert_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:73:8: note: forward declaration of ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
73 | struct CsvFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:314:10: error: invalid use of incomplete type ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
314 | options->read_options = *read_options;
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:73:8: note: forward declaration of ‘using element_type = struct arrow::dataset::CsvFragmentScanOptions’ {aka ‘struct arrow::dataset::CsvFragmentScanOptions’}
73 | struct CsvFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~
dataset.cpp: In function ‘std::shared_ptr<arrow::dataset::ParquetFragmentScanOptions> dataset___ParquetFragmentScanOptions__Make(bool, int64_t, bool)’:
dataset.cpp:324:12: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
324 | options->reader_properties->enable_buffered_stream();
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:326:12: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
326 | options->reader_properties->disable_buffered_stream();
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:328:10: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
328 | options->reader_properties->set_buffer_size(buffer_size);
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:329:10: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
329 | options->arrow_reader_properties->set_pre_buffer(pre_buffer);
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
dataset.cpp:331:12: error: invalid use of incomplete type ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
331 | options->arrow_reader_properties->set_cache_options(
| ^~
In file included from ./arrow_types.h:44,
from dataset.cpp:18:
/home/tdhock/include/arrow/dataset/type_fwd.h:82:7: note: forward declaration of ‘using element_type = class arrow::dataset::ParquetFragmentScanOptions’ {aka ‘class arrow::dataset::ParquetFragmentScanOptions’}
82 | class ParquetFragmentScanOptions;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:56,
from /home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:52,
from /home/tdhock/include/c++/10.1.0/memory:84,
from ././arrow_cpp11.h:20,
from ./arrow_types.h:22,
from dataset.cpp:18:
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h: In instantiation of ‘struct __gnu_cxx::__aligned_buffer<arrow::dataset::ParquetFileFormat>’:
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:538:35: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::ParquetFileFormat, std::allocator<arrow::dataset::ParquetFileFormat>, __gnu_cxx::_S_atomic>::_Impl’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:599:13: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::ParquetFileFormat, std::allocator<arrow::dataset::ParquetFileFormat>, __gnu_cxx::_S_atomic>’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:679:43: required from ‘std::__shared_count<_Lp>::__shared_count(_Tp*&, std::_Sp_alloc_shared_tag<_Alloc>, _Args&& ...) [with _Tp = arrow::dataset::ParquetFileFormat; _Alloc = std::allocator<arrow::dataset::ParquetFileFormat>; _Args = {}; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:1371:71: required from ‘std::__shared_ptr<_Tp, _Lp>::__shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::ParquetFileFormat>; _Args = {}; _Tp = arrow::dataset::ParquetFileFormat; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:408:59: required from ‘std::shared_ptr<_Tp>::shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::ParquetFileFormat>; _Args = {}; _Tp = arrow::dataset::ParquetFileFormat]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:859:14: required from ‘std::shared_ptr<_Tp> std::allocate_shared(const _Alloc&, _Args&& ...) [with _Tp = arrow::dataset::ParquetFileFormat; _Alloc = std::allocator<arrow::dataset::ParquetFileFormat>; _Args = {}]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:875:39: required from ‘std::shared_ptr<_Tp> std::make_shared(_Args&& ...) [with _Tp = arrow::dataset::ParquetFileFormat; _Args = {}]’
dataset.cpp:228:54: required from here
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::ParquetFileFormat’
91 | : std::aligned_storage<sizeof(_Tp), __alignof__(_Tp)>
| ^~~~~~~~~~~
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::ParquetFileFormat’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h: In instantiation of ‘struct __gnu_cxx::__aligned_buffer<arrow::dataset::CsvFileFormat>’:
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:538:35: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::CsvFileFormat, std::allocator<arrow::dataset::CsvFileFormat>, __gnu_cxx::_S_atomic>::_Impl’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:599:13: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::CsvFileFormat, std::allocator<arrow::dataset::CsvFileFormat>, __gnu_cxx::_S_atomic>’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:679:43: required from ‘std::__shared_count<_Lp>::__shared_count(_Tp*&, std::_Sp_alloc_shared_tag<_Alloc>, _Args&& ...) [with _Tp = arrow::dataset::CsvFileFormat; _Alloc = std::allocator<arrow::dataset::CsvFileFormat>; _Args = {}; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:1371:71: required from ‘std::__shared_ptr<_Tp, _Lp>::__shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::CsvFileFormat>; _Args = {}; _Tp = arrow::dataset::CsvFileFormat; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:408:59: required from ‘std::shared_ptr<_Tp>::shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::CsvFileFormat>; _Args = {}; _Tp = arrow::dataset::CsvFileFormat]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:859:14: required from ‘std::shared_ptr<_Tp> std::allocate_shared(const _Alloc&, _Args&& ...) [with _Tp = arrow::dataset::CsvFileFormat; _Alloc = std::allocator<arrow::dataset::CsvFileFormat>; _Args = {}]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:875:39: required from ‘std::shared_ptr<_Tp> std::make_shared(_Args&& ...) [with _Tp = arrow::dataset::CsvFileFormat; _Args = {}]’
dataset.cpp:291:53: required from here
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::CsvFileFormat’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::CsvFileFormat’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h: In instantiation of ‘struct __gnu_cxx::__aligned_buffer<arrow::dataset::CsvFragmentScanOptions>’:
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:538:35: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::CsvFragmentScanOptions, std::allocator<arrow::dataset::CsvFragmentScanOptions>, __gnu_cxx::_S_atomic>::_Impl’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:599:13: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::CsvFragmentScanOptions, std::allocator<arrow::dataset::CsvFragmentScanOptions>, __gnu_cxx::_S_atomic>’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:679:43: required from ‘std::__shared_count<_Lp>::__shared_count(_Tp*&, std::_Sp_alloc_shared_tag<_Alloc>, _Args&& ...) [with _Tp = arrow::dataset::CsvFragmentScanOptions; _Alloc = std::allocator<arrow::dataset::CsvFragmentScanOptions>; _Args = {}; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:1371:71: required from ‘std::__shared_ptr<_Tp, _Lp>::__shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::CsvFragmentScanOptions>; _Args = {}; _Tp = arrow::dataset::CsvFragmentScanOptions; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:408:59: required from ‘std::shared_ptr<_Tp>::shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::CsvFragmentScanOptions>; _Args = {}; _Tp = arrow::dataset::CsvFragmentScanOptions]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:859:14: required from ‘std::shared_ptr<_Tp> std::allocate_shared(const _Alloc&, _Args&& ...) [with _Tp = arrow::dataset::CsvFragmentScanOptions; _Alloc = std::allocator<arrow::dataset::CsvFragmentScanOptions>; _Args = {}]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:875:39: required from ‘std::shared_ptr<_Tp> std::make_shared(_Args&& ...) [with _Tp = arrow::dataset::CsvFragmentScanOptions; _Args = {}]’
dataset.cpp:293:68: required from here
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::CsvFragmentScanOptions’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::CsvFragmentScanOptions’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h: In instantiation of ‘struct __gnu_cxx::__aligned_buffer<arrow::dataset::ParquetFragmentScanOptions>’:
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:538:35: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::ParquetFragmentScanOptions, std::allocator<arrow::dataset::ParquetFragmentScanOptions>, __gnu_cxx::_S_atomic>::_Impl’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:599:13: required from ‘class std::_Sp_counted_ptr_inplace<arrow::dataset::ParquetFragmentScanOptions, std::allocator<arrow::dataset::ParquetFragmentScanOptions>, __gnu_cxx::_S_atomic>’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:679:43: required from ‘std::__shared_count<_Lp>::__shared_count(_Tp*&, std::_Sp_alloc_shared_tag<_Alloc>, _Args&& ...) [with _Tp = arrow::dataset::ParquetFragmentScanOptions; _Alloc = std::allocator<arrow::dataset::ParquetFragmentScanOptions>; _Args = {}; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr_base.h:1371:71: required from ‘std::__shared_ptr<_Tp, _Lp>::__shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::ParquetFragmentScanOptions>; _Args = {}; _Tp = arrow::dataset::ParquetFragmentScanOptions; __gnu_cxx::_Lock_policy _Lp = __gnu_cxx::_S_atomic]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:408:59: required from ‘std::shared_ptr<_Tp>::shared_ptr(std::_Sp_alloc_shared_tag<_Tp>, _Args&& ...) [with _Alloc = std::allocator<arrow::dataset::ParquetFragmentScanOptions>; _Args = {}; _Tp = arrow::dataset::ParquetFragmentScanOptions]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:859:14: required from ‘std::shared_ptr<_Tp> std::allocate_shared(const _Alloc&, _Args&& ...) [with _Tp = arrow::dataset::ParquetFragmentScanOptions; _Alloc = std::allocator<arrow::dataset::ParquetFragmentScanOptions>; _Args = {}]’
/home/tdhock/include/c++/10.1.0/bits/shared_ptr.h:875:39: required from ‘std::shared_ptr<_Tp> std::make_shared(_Args&& ...) [with _Tp = arrow::dataset::ParquetFragmentScanOptions; _Args = {}]’
dataset.cpp:322:67: required from here
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::ParquetFragmentScanOptions’
/home/tdhock/include/c++/10.1.0/ext/aligned_buffer.h:91:28: error: invalid application of ‘sizeof’ to incomplete type ‘arrow::dataset::ParquetFragmentScanOptions’
/home/tdhock/lib/R/etc/Makeconf:198: recipe for target 'dataset.o' failed
make: *** [dataset.o] Error 1
ERROR: compilation failed for package ‘arrow’
* removing ‘/home/tdhock/lib/R/library/arrow’
* restoring previous ‘/home/tdhock/lib/R/library/arrow’
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main*)$ cat ~/include/arrow/dataset/api.h
// Licensed to the Apache Software Foundation (ASF) under one
// or more contributor license agreements. See the NOTICE file
// distributed with this work for additional information
// regarding copyright ownership. The ASF licenses this file
// to you under the Apache License, Version 2.0 (the
// "License"); you may not use this file except in compliance
// with the License. You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing,
// software distributed under the License is distributed on an
// "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
// KIND, either express or implied. See the License for the
// specific language governing permissions and limitations
// under the License.
// This API is EXPERIMENTAL.
#pragma once
#include "arrow/util/config.h"
#include "arrow/compute/expression.h"
#include "arrow/dataset/dataset.h"
#include "arrow/dataset/discovery.h"
#include "arrow/dataset/file_base.h"
#ifdef ARROW_CSV
#include "arrow/dataset/file_csv.h"
#endif
#ifdef ARROW_JSON
#include "arrow/dataset/file_json.h"
#endif
#include "arrow/dataset/file_ipc.h"
#ifdef ARROW_ORC
#include "arrow/dataset/file_orc.h"
#endif
#ifdef ARROW_PARQUET
#include "arrow/dataset/file_parquet.h"
#endif
#include "arrow/dataset/scanner.h"
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main*)$ cat ~/include/arrow/util/config.h
// Licensed to the Apache Software Foundation (ASF) under one
// or more contributor license agreements. See the NOTICE file
// distributed with this work for additional information
// regarding copyright ownership. The ASF licenses this file
// to you under the Apache License, Version 2.0 (the
// "License"); you may not use this file except in compliance
// with the License. You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing,
// software distributed under the License is distributed on an
// "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
// KIND, either express or implied. See the License for the
// specific language governing permissions and limitations
// under the License.
#define ARROW_VERSION_MAJOR 13
#define ARROW_VERSION_MINOR 0
#define ARROW_VERSION_PATCH 0
#define ARROW_VERSION ((ARROW_VERSION_MAJOR * 1000) + ARROW_VERSION_MINOR) * 1000 + ARROW_VERSION_PATCH
#define ARROW_VERSION_STRING "13.0.0-SNAPSHOT"
#define ARROW_SO_VERSION "1300"
#define ARROW_FULL_SO_VERSION "1300.0.0"
#define ARROW_CXX_COMPILER_ID "GNU"
#define ARROW_CXX_COMPILER_VERSION "7.5.0"
#define ARROW_CXX_COMPILER_FLAGS " -fdiagnostics-color=always"
#define ARROW_BUILD_TYPE "RELEASE"
#define ARROW_GIT_ID "6d3fe6bda1c3b67b683ada2327194adeed09e9ca"
#define ARROW_GIT_DESCRIPTION "apache-arrow-13.0.0.dev-46-g6d3fe6bda"
#define ARROW_PACKAGE_KIND ""
/* #undef ARROW_COMPUTE */
/* #undef ARROW_CSV */
/* #undef ARROW_CUDA */
/* #undef ARROW_DATASET */
/* #undef ARROW_FILESYSTEM */
/* #undef ARROW_FLIGHT */
/* #undef ARROW_FLIGHT_SQL */
#define ARROW_IPC
#define ARROW_JEMALLOC
#define ARROW_JEMALLOC_VENDORED
/* #undef ARROW_JSON */
/* #undef ARROW_ORC */
/* #undef ARROW_PARQUET */
/* #undef ARROW_SUBSTRAIT */
/* #undef ARROW_GCS */
/* #undef ARROW_S3 */
#define ARROW_USE_NATIVE_INT128
/* #undef ARROW_WITH_MUSL */
/* #undef ARROW_WITH_OPENTELEMETRY */
/* #undef ARROW_WITH_UCX */
/* #undef GRPCPP_PP_INCLUDE */
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main*)$
```
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[GitHub] [arrow] kou commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "kou (via GitHub)" <gi...@apache.org>.
kou commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1545874343
Thanks.
But I want to see the full log of `CC=$HOME/bin/gcc CXX=$HOME/bin/g++ cmake .. --preset ninja-debug-basic ...` not `cmake --install .`.
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[GitHub] [arrow] kou closed issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "kou (via GitHub)" <gi...@apache.org>.
kou closed issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
URL: https://github.com/apache/arrow/issues/35566
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[GitHub] [arrow] nealrichardson commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "nealrichardson (via GitHub)" <gi...@apache.org>.
nealrichardson commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1545693958
Hmm, that seems to be the only C++ header that conditionally includes based on those flags. Generally we include all headers, even if the libraries aren't built. The change [isn't new](https://github.com/apache/arrow/commit/7a0ba80702ef63e63e346d2a9ca3137d8baca8bb#diff-530f0914dc7aefcd52f64956e56bf69c7c1fa93062b1911a24faa72aba40fa8d) though I'm not sure what's different now (I would have expected to have run into this before myself).
@kou any idea? do these flags need to be added to the cflags in arrow.pc?
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[GitHub] [arrow] kou commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "kou (via GitHub)" <gi...@apache.org>.
kou commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1546237610
Thanks.
Could you try `rm ~/arrow-git/cpp/src/arrow/util/config.h` and `cmake --install .`?
I think that you ran `cmake ...` in `~/arrow-git/cpp/` not `~/arrow-git/cpp/build/` before. There are some generated files in `~/arrow-git/cpp/`. `git status` will show them.
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[GitHub] [arrow] kou commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "kou (via GitHub)" <gi...@apache.org>.
kou commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1545854944
No.
Could you attach full `cmake ...` log?
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[GitHub] [arrow] tdhock commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "tdhock (via GitHub)" <gi...@apache.org>.
tdhock commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1545902364
Hi again @kou does this help?
```
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main*)$ CC=$HOME/bin/gcc CXX=$HOME/bin/g++ cmake .. --preset ninja-debug-basic -DCMAKE_INSTALL_PREFIX=$HOME -DARROW_CXXFLAGS=-march=core2 -DARROW_PARQUET=ON -DARROW_SIM_LEVEL=NONE
Preset CMake variables:
ARROW_BUILD_INTEGRATION="ON"
ARROW_BUILD_STATIC="OFF"
ARROW_BUILD_TESTS="ON"
ARROW_COMPUTE="ON"
ARROW_CSV="ON"
ARROW_DATASET="ON"
ARROW_EXTRA_ERROR_CONTEXT="ON"
ARROW_FILESYSTEM="ON"
ARROW_JSON="ON"
ARROW_WITH_RE2="OFF"
ARROW_WITH_UTF8PROC="OFF"
CMAKE_BUILD_TYPE="Debug"
-- Building using CMake version: 3.22.1
-- Arrow version: 13.0.0 (full: '13.0.0-SNAPSHOT')
-- Arrow SO version: 1300 (full: 1300.0.0)
-- clang-tidy 14 not found
-- clang-format 14 not found
-- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN)
-- infer not found
-- Found cpplint executable at /home/tdhock/arrow-git/cpp/build-support/cpplint.py
-- System processor: x86_64
-- Arrow build warning level: CHECKIN
-- Using ld linker
-- Build Type: DEBUG
-- Using CONDA approach to find dependencies
-- Using CONDA_PREFIX for ARROW_PACKAGE_PREFIX: /home/tdhock/.local/share/r-miniconda/envs/arrow
-- Setting (unset) dependency *_ROOT variables: /home/tdhock/.local/share/r-miniconda/envs/arrow
-- ARROW_ABSL_BUILD_VERSION: 20211102.0
-- ARROW_ABSL_BUILD_SHA256_CHECKSUM: dcf71b9cba8dc0ca9940c4b316a0c796be8fab42b070bb6b7cab62b48f0e66c4
-- ARROW_AWS_C_AUTH_BUILD_VERSION: v0.6.22
-- ARROW_AWS_C_AUTH_BUILD_SHA256_CHECKSUM: 691a6b4418afcd3dc141351b6ad33fccd8e3ff84df0e9e045b42295d284ee14c
-- ARROW_AWS_C_CAL_BUILD_VERSION: v0.5.20
-- ARROW_AWS_C_CAL_BUILD_SHA256_CHECKSUM: acc352359bd06f8597415c366cf4ec4f00d0b0da92d637039a73323dd55b6cd0
-- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.8.9
-- ARROW_AWS_C_COMMON_BUILD_SHA256_CHECKSUM: 2f3fbaf7c38eae5a00e2a816d09b81177f93529ae8ba1b82dc8f31407565327a
-- ARROW_AWS_C_COMPRESSION_BUILD_VERSION: v0.2.16
-- ARROW_AWS_C_COMPRESSION_BUILD_SHA256_CHECKSUM: 044b1dbbca431a07bde8255ef9ec443c300fc60d4c9408d4b862f65e496687f4
-- ARROW_AWS_C_EVENT_STREAM_BUILD_VERSION: v0.2.18
-- ARROW_AWS_C_EVENT_STREAM_BUILD_SHA256_CHECKSUM: 310ca617f713bf664e4c7485a3d42c1fb57813abd0107e49790d107def7cde4f
-- ARROW_AWS_C_HTTP_BUILD_VERSION: v0.7.3
-- ARROW_AWS_C_HTTP_BUILD_SHA256_CHECKSUM: 07e16c6bf5eba6f0dea96b6f55eae312a7c95b736f4d2e4a210000f45d8265ae
-- ARROW_AWS_C_IO_BUILD_VERSION: v0.13.14
-- ARROW_AWS_C_IO_BUILD_SHA256_CHECKSUM: 12b66510c3d9a4f7e9b714e9cfab2a5bf835f8b9ce2f909d20ae2a2128608c71
-- ARROW_AWS_C_MQTT_BUILD_VERSION: v0.8.4
-- ARROW_AWS_C_MQTT_BUILD_SHA256_CHECKSUM: 232eeac63e72883d460c686a09b98cdd811d24579affac47c5c3f696f956773f
-- ARROW_AWS_C_S3_BUILD_VERSION: v0.2.3
-- ARROW_AWS_C_S3_BUILD_SHA256_CHECKSUM: a00b3c9f319cd1c9aa2c3fa15098864df94b066dcba0deaccbb3caa952d902fe
-- ARROW_AWS_C_SDKUTILS_BUILD_VERSION: v0.1.6
-- ARROW_AWS_C_SDKUTILS_BUILD_SHA256_CHECKSUM: 8a2951344b2fb541eab1e9ca17c18a7fcbfd2aaff4cdd31d362d1fad96111b91
-- ARROW_AWS_CHECKSUMS_BUILD_VERSION: v0.1.13
-- ARROW_AWS_CHECKSUMS_BUILD_SHA256_CHECKSUM: 0f897686f1963253c5069a0e495b85c31635ba146cd3ac38cc2ea31eaf54694d
-- ARROW_AWS_CRT_CPP_BUILD_VERSION: v0.18.16
-- ARROW_AWS_CRT_CPP_BUILD_SHA256_CHECKSUM: 9e69bc1dc4b50871d1038aa9ff6ddeb4c9b28f7d6b5e5b1b69041ccf50a13483
-- ARROW_AWS_LC_BUILD_VERSION: v1.3.0
-- ARROW_AWS_LC_BUILD_SHA256_CHECKSUM: ae96a3567161552744fc0cae8b4d68ed88b1ec0f3d3c98700070115356da5a37
-- ARROW_AWSSDK_BUILD_VERSION: 1.10.55
-- ARROW_AWSSDK_BUILD_SHA256_CHECKSUM: 2d552fb1a84bef4a9b65e34aa7031851ed2aef5319e02cc6e4cb735c48aa30de
-- ARROW_BOOST_BUILD_VERSION: 1.81.0
-- ARROW_BOOST_BUILD_SHA256_CHECKSUM: 9e0ffae35528c35f90468997bc8d99500bf179cbae355415a89a600c38e13574
-- ARROW_BROTLI_BUILD_VERSION: v1.0.9
-- ARROW_BROTLI_BUILD_SHA256_CHECKSUM: f9e8d81d0405ba66d181529af42a3354f838c939095ff99930da6aa9cdf6fe46
-- ARROW_BZIP2_BUILD_VERSION: 1.0.8
-- ARROW_BZIP2_BUILD_SHA256_CHECKSUM: ab5a03176ee106d3f0fa90e381da478ddae405918153cca248e682cd0c4a2269
-- ARROW_CARES_BUILD_VERSION: 1.17.2
-- ARROW_CARES_BUILD_SHA256_CHECKSUM: 4803c844ce20ce510ef0eb83f8ea41fa24ecaae9d280c468c582d2bb25b3913d
-- ARROW_CRC32C_BUILD_VERSION: 1.1.2
-- ARROW_CRC32C_BUILD_SHA256_CHECKSUM: ac07840513072b7fcebda6e821068aa04889018f24e10e46181068fb214d7e56
-- ARROW_GBENCHMARK_BUILD_VERSION: v1.7.1
-- ARROW_GBENCHMARK_BUILD_SHA256_CHECKSUM: 6430e4092653380d9dc4ccb45a1e2dc9259d581f4866dc0759713126056bc1d7
-- ARROW_GFLAGS_BUILD_VERSION: v2.2.2
-- ARROW_GFLAGS_BUILD_SHA256_CHECKSUM: 34af2f15cf7367513b352bdcd2493ab14ce43692d2dcd9dfc499492966c64dcf
-- ARROW_GLOG_BUILD_VERSION: v0.5.0
-- ARROW_GLOG_BUILD_SHA256_CHECKSUM: eede71f28371bf39aa69b45de23b329d37214016e2055269b3b5e7cfd40b59f5
-- ARROW_GOOGLE_CLOUD_CPP_BUILD_VERSION: v2.8.0
-- ARROW_GOOGLE_CLOUD_CPP_BUILD_SHA256_CHECKSUM: 21fb441b5a670a18bb16b6826be8e0530888d0b94320847c538d46f5a54dddbc
-- ARROW_GRPC_BUILD_VERSION: v1.46.3
-- ARROW_GRPC_BUILD_SHA256_CHECKSUM: d6cbf22cb5007af71b61c6be316a79397469c58c82a942552a62e708bce60964
-- ARROW_GTEST_BUILD_VERSION: 1.11.0
-- ARROW_GTEST_BUILD_SHA256_CHECKSUM: b4870bf121ff7795ba20d20bcdd8627b8e088f2d1dab299a031c1034eddc93d5
-- ARROW_JEMALLOC_BUILD_VERSION: 5.3.0
-- ARROW_JEMALLOC_BUILD_SHA256_CHECKSUM: 2db82d1e7119df3e71b7640219b6dfe84789bc0537983c3b7ac4f7189aecfeaa
-- ARROW_LZ4_BUILD_VERSION: v1.9.4
-- ARROW_LZ4_BUILD_SHA256_CHECKSUM: 0b0e3aa07c8c063ddf40b082bdf7e37a1562bda40a0ff5272957f3e987e0e54b
-- ARROW_MIMALLOC_BUILD_VERSION: v2.0.6
-- ARROW_MIMALLOC_BUILD_SHA256_CHECKSUM: 9f05c94cc2b017ed13698834ac2a3567b6339a8bde27640df5a1581d49d05ce5
-- ARROW_NLOHMANN_JSON_BUILD_VERSION: v3.10.5
-- ARROW_NLOHMANN_JSON_BUILD_SHA256_CHECKSUM: 5daca6ca216495edf89d167f808d1d03c4a4d929cef7da5e10f135ae1540c7e4
-- ARROW_OPENTELEMETRY_BUILD_VERSION: v1.8.1
-- ARROW_OPENTELEMETRY_BUILD_SHA256_CHECKSUM: 3d640201594b07f08dade9cd1017bd0b59674daca26223b560b9bb6bf56264c2
-- ARROW_OPENTELEMETRY_PROTO_BUILD_VERSION: v0.17.0
-- ARROW_OPENTELEMETRY_PROTO_BUILD_SHA256_CHECKSUM: f269fbcb30e17b03caa1decd231ce826e59d7651c0f71c3b28eb5140b4bb5412
-- ARROW_ORC_BUILD_VERSION: 1.8.3
-- ARROW_ORC_BUILD_SHA256_CHECKSUM: a78678ec425c8129d63370cb8a9bacb54186aa66af1e2bec01ce92e7eaf72e20
-- ARROW_PROTOBUF_BUILD_VERSION: v21.3
-- ARROW_PROTOBUF_BUILD_SHA256_CHECKSUM: 2f723218f6cb709ae4cdc4fb5ed56a5951fc5d466f0128ce4c946b8c78c8c49f
-- ARROW_RAPIDJSON_BUILD_VERSION: 232389d4f1012dddec4ef84861face2d2ba85709
-- ARROW_RAPIDJSON_BUILD_SHA256_CHECKSUM: b9290a9a6d444c8e049bd589ab804e0ccf2b05dc5984a19ed5ae75d090064806
-- ARROW_RE2_BUILD_VERSION: 2022-06-01
-- ARROW_RE2_BUILD_SHA256_CHECKSUM: f89c61410a072e5cbcf8c27e3a778da7d6fd2f2b5b1445cd4f4508bee946ab0f
-- ARROW_SNAPPY_BUILD_VERSION: 1.1.9
-- ARROW_SNAPPY_BUILD_SHA256_CHECKSUM: 75c1fbb3d618dd3a0483bff0e26d0a92b495bbe5059c8b4f1c962b478b6e06e7
-- ARROW_SUBSTRAIT_BUILD_VERSION: v0.20.0
-- ARROW_SUBSTRAIT_BUILD_SHA256_CHECKSUM: 5ceaa559ccef29a7825b5e5d4b5e7eed384830294f08bec913feecdd903a94cf
-- ARROW_S2N_TLS_BUILD_VERSION: v1.3.35
-- ARROW_S2N_TLS_BUILD_SHA256_CHECKSUM: 9d32b26e6bfcc058d98248bf8fc231537e347395dd89cf62bb432b55c5da990d
-- ARROW_THRIFT_BUILD_VERSION: 0.16.0
-- ARROW_THRIFT_BUILD_SHA256_CHECKSUM: f460b5c1ca30d8918ff95ea3eb6291b3951cf518553566088f3f2be8981f6209
-- ARROW_UCX_BUILD_VERSION: 1.12.1
-- ARROW_UCX_BUILD_SHA256_CHECKSUM: 9bef31aed0e28bf1973d28d74d9ac4f8926c43ca3b7010bd22a084e164e31b71
-- ARROW_UTF8PROC_BUILD_VERSION: v2.7.0
-- ARROW_UTF8PROC_BUILD_SHA256_CHECKSUM: 4bb121e297293c0fd55f08f83afab6d35d48f0af4ecc07523ad8ec99aa2b12a1
-- ARROW_XSIMD_BUILD_VERSION: 9.0.1
-- ARROW_XSIMD_BUILD_SHA256_CHECKSUM: b1bb5f92167fd3a4f25749db0be7e61ed37e0a5d943490f3accdcd2cd2918cc0
-- ARROW_ZLIB_BUILD_VERSION: 1.2.13
-- ARROW_ZLIB_BUILD_SHA256_CHECKSUM: b3a24de97a8fdbc835b9833169501030b8977031bcb54b3b3ac13740f846ab30
-- ARROW_ZSTD_BUILD_VERSION: 1.5.5
-- ARROW_ZSTD_BUILD_SHA256_CHECKSUM: 9c4396cc829cfae319a6e2615202e82aad41372073482fce286fac78646d3ee4
-- Boost include dir: /usr/include
-- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required.
-- Found thrift: /home/tdhock/.local/share/r-miniconda/envs/arrow
-- Found OpenSSL: /home/tdhock/.local/share/r-miniconda/envs/arrow/lib/libcrypto.so (found version "1.1.1t")
-- Found libevent include directory: /home/tdhock/.local/share/r-miniconda/envs/arrow/include
-- Found libevent component: /home/tdhock/.local/share/r-miniconda/envs/arrow/lib/libevent_core.so
-- Found libevent component: /home/tdhock/.local/share/r-miniconda/envs/arrow/lib/libevent_extra.so
-- Found libevent component: /home/tdhock/.local/share/r-miniconda/envs/arrow/lib/libevent_openssl.so
-- Found libevent component: /home/tdhock/.local/share/r-miniconda/envs/arrow/lib/libevent_pthreads.so
-- Found libevent 2.1.12 in /home/tdhock/.local/share/r-miniconda/envs/arrow
-- Providing CMake module for ThriftAlt as part of Arrow CMake package
-- Building jemalloc from source
-- Could NOT find GTest (missing: GTest_DIR)
-- Building gtest from source
-- RapidJSON found. Headers: /home/tdhock/.local/share/r-miniconda/envs/arrow/include
-- xsimd found. Headers: /home/tdhock/.local/share/r-miniconda/envs/arrow/include
-- Found hdfs.h at: /home/tdhock/arrow-git/cpp/thirdparty/hadoop/include/hdfs.h
-- All bundled static libraries: jemalloc::jemalloc
-- CMAKE_C_FLAGS: -Wall -Wno-conversion -Wno-sign-conversion -Wunused-result -fno-semantic-interposition -msse4.2 -march=core2
-- CMAKE_CXX_FLAGS: -Wno-noexcept-type -fdiagnostics-color=always -Wall -Wno-conversion -Wno-sign-conversion -Wunused-result -fno-semantic-interposition -msse4.2 -march=core2
-- CMAKE_C_FLAGS_DEBUG: -g -Werror -O0 -ggdb
-- CMAKE_CXX_FLAGS_DEBUG: -g -Werror -O0 -ggdb
-- ---------------------------------------------------------------------
-- Arrow version: 13.0.0-SNAPSHOT
--
-- Build configuration summary:
-- Generator: Ninja
-- Build type: DEBUG
-- Source directory: /home/tdhock/arrow-git/cpp
-- Install prefix: /home/tdhock
--
-- Compile and link options:
--
-- ARROW_CXXFLAGS=-march=core2 [default=""]
-- Compiler flags to append when compiling Arrow
-- ARROW_BUILD_STATIC=OFF [default=ON]
-- Build static libraries
-- ARROW_BUILD_SHARED=ON [default=ON]
-- Build shared libraries
-- ARROW_PACKAGE_KIND="" [default=""]
-- Arbitrary string that identifies the kind of package
-- (for informational purposes)
-- ARROW_GIT_ID=6d3fe6bda1c3b67b683ada2327194adeed09e9ca [default=""]
-- The Arrow git commit id (if any)
-- ARROW_GIT_DESCRIPTION=apache-arrow-13.0.0.dev-46-g6d3fe6bda-dirty [default=""]
-- The Arrow git commit description (if any)
-- ARROW_NO_DEPRECATED_API=OFF [default=OFF]
-- Exclude deprecated APIs from build
-- ARROW_POSITION_INDEPENDENT_CODE=ON [default=ON]
-- Whether to create position-independent target
-- ARROW_USE_CCACHE=ON [default=ON]
-- Use ccache when compiling (if available)
-- ARROW_USE_SCCACHE=ON [default=ON]
-- Use sccache when compiling (if available),
-- takes precedence over ccache if a storage backend is configured
-- ARROW_USE_LD_GOLD=OFF [default=OFF]
-- Use ld.gold for linking on Linux (if available)
-- ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF]
-- Use precompiled headers when compiling
-- ARROW_SIMD_LEVEL=SSE4_2 [default=NONE|SSE4_2|AVX2|AVX512|NEON|SVE|SVE128|SVE256|SVE512|DEFAULT]
-- Compile-time SIMD optimization level
-- ARROW_RUNTIME_SIMD_LEVEL=MAX [default=NONE|SSE4_2|AVX2|AVX512|MAX]
-- Max runtime SIMD optimization level
-- ARROW_ALTIVEC=ON [default=ON]
-- Build with Altivec if compiler has support
-- ARROW_RPATH_ORIGIN=OFF [default=OFF]
-- Build Arrow libraries with RATH set to $ORIGIN
-- ARROW_INSTALL_NAME_RPATH=ON [default=ON]
-- Build Arrow libraries with install_name set to @rpath
-- ARROW_GGDB_DEBUG=ON [default=ON]
-- Pass -ggdb flag to debug builds
-- ARROW_WITH_MUSL=OFF [default=OFF]
-- Whether the system libc is musl or not
--
-- Test and benchmark options:
--
-- ARROW_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Arrow examples
-- ARROW_BUILD_TESTS=ON [default=OFF]
-- Build the Arrow googletest unit tests
-- ARROW_ENABLE_TIMING_TESTS=ON [default=ON]
-- Enable timing-sensitive tests
-- ARROW_BUILD_INTEGRATION=ON [default=OFF]
-- Build the Arrow integration test executables
-- ARROW_BUILD_BENCHMARKS=OFF [default=OFF]
-- Build the Arrow micro benchmarks
-- ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF]
-- Build the Arrow micro reference benchmarks
-- ARROW_BUILD_OPENMP_BENCHMARKS=OFF [default=OFF]
-- Build the Arrow benchmarks that rely on OpenMP
-- ARROW_BUILD_DETAILED_BENCHMARKS=OFF [default=OFF]
-- Build benchmarks that do a longer exploration of performance
-- ARROW_TEST_LINKAGE=shared [default=shared|static]
-- Linkage of Arrow libraries with unit tests executables.
-- ARROW_FUZZING=OFF [default=OFF]
-- Build Arrow Fuzzing executables
-- ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF]
-- Enable unit tests which use large memory
--
-- Lint options:
--
-- ARROW_ONLY_LINT=OFF [default=OFF]
-- Only define the lint and check-format targets
-- ARROW_VERBOSE_LINT=OFF [default=OFF]
-- If off, 'quiet' flags will be passed to linting tools
-- ARROW_GENERATE_COVERAGE=OFF [default=OFF]
-- Build with C++ code coverage enabled
--
-- Checks options:
--
-- ARROW_TEST_MEMCHECK=OFF [default=OFF]
-- Run the test suite using valgrind --tool=memcheck
-- ARROW_USE_ASAN=OFF [default=OFF]
-- Enable Address Sanitizer checks
-- ARROW_USE_TSAN=OFF [default=OFF]
-- Enable Thread Sanitizer checks
-- ARROW_USE_UBSAN=OFF [default=OFF]
-- Enable Undefined Behavior sanitizer checks
--
-- Project component options:
--
-- ARROW_BUILD_UTILITIES=OFF [default=OFF]
-- Build Arrow commandline utilities
-- ARROW_COMPUTE=ON [default=OFF]
-- Build all Arrow Compute kernels
-- ARROW_CSV=ON [default=OFF]
-- Build the Arrow CSV Parser Module
-- ARROW_CUDA=OFF [default=OFF]
-- Build the Arrow CUDA extensions (requires CUDA toolkit)
-- ARROW_DATASET=ON [default=OFF]
-- Build the Arrow Dataset Modules
-- ARROW_FILESYSTEM=ON [default=OFF]
-- Build the Arrow Filesystem Layer
-- ARROW_FLIGHT=OFF [default=OFF]
-- Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers)
-- ARROW_FLIGHT_SQL=OFF [default=OFF]
-- Build the Arrow Flight SQL extension
-- ARROW_GANDIVA=OFF [default=OFF]
-- Build the Gandiva libraries
-- ARROW_GCS=OFF [default=OFF]
-- Build Arrow with GCS support (requires the GCloud SDK for C++)
-- ARROW_HDFS=OFF [default=OFF]
-- Build the Arrow HDFS bridge
-- ARROW_IPC=ON [default=ON]
-- Build the Arrow IPC extensions
-- ARROW_JEMALLOC=ON [default=ON]
-- Build the Arrow jemalloc-based allocator
-- ARROW_JSON=ON [default=OFF]
-- Build Arrow with JSON support (requires RapidJSON)
-- ARROW_MIMALLOC=OFF [default=OFF]
-- Build the Arrow mimalloc-based allocator
-- ARROW_PARQUET=ON [default=OFF]
-- Build the Parquet libraries
-- ARROW_ORC=OFF [default=OFF]
-- Build the Arrow ORC adapter
-- ARROW_PYTHON=OFF [default=OFF]
-- Build some components needed by PyArrow.
-- (This is a deprecated option. Use CMake presets instead.)
-- ARROW_S3=OFF [default=OFF]
-- Build Arrow with S3 support (requires the AWS SDK for C++)
-- ARROW_SKYHOOK=OFF [default=OFF]
-- Build the Skyhook libraries
-- ARROW_SUBSTRAIT=OFF [default=OFF]
-- Build the Arrow Substrait Consumer Module
-- ARROW_ACERO=ON [default=OFF]
-- Build the Arrow Acero Engine Module
-- ARROW_TENSORFLOW=OFF [default=OFF]
-- Build Arrow with TensorFlow support enabled
-- ARROW_TESTING=ON [default=OFF]
-- Build the Arrow testing libraries
--
-- Thirdparty toolchain options:
--
-- ARROW_DEPENDENCY_SOURCE=CONDA [default=AUTO|BUNDLED|SYSTEM|CONDA|VCPKG|BREW]
-- Method to use for acquiring arrow's build dependencies
-- ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF]
-- Show output from ExternalProjects rather than just logging to files
-- ARROW_DEPENDENCY_USE_SHARED=ON [default=ON]
-- Link to shared libraries
-- ARROW_BOOST_USE_SHARED=ON [default=ON]
-- Rely on Boost shared libraries where relevant
-- ARROW_BROTLI_USE_SHARED=ON [default=ON]
-- Rely on Brotli shared libraries where relevant
-- ARROW_BZ2_USE_SHARED=ON [default=ON]
-- Rely on Bz2 shared libraries where relevant
-- ARROW_GFLAGS_USE_SHARED=ON [default=ON]
-- Rely on GFlags shared libraries where relevant
-- ARROW_GRPC_USE_SHARED=ON [default=ON]
-- Rely on gRPC shared libraries where relevant
-- ARROW_JEMALLOC_USE_SHARED=OFF [default=ON]
-- Rely on jemalloc shared libraries where relevant
-- ARROW_LZ4_USE_SHARED=ON [default=ON]
-- Rely on lz4 shared libraries where relevant
-- ARROW_OPENSSL_USE_SHARED=ON [default=ON]
-- Rely on OpenSSL shared libraries where relevant
-- ARROW_PROTOBUF_USE_SHARED=ON [default=ON]
-- Rely on Protocol Buffers shared libraries where relevant
-- ARROW_SNAPPY_USE_SHARED=ON [default=ON]
-- Rely on snappy shared libraries where relevant
-- ARROW_THRIFT_USE_SHARED=OFF [default=ON]
-- Rely on thrift shared libraries where relevant
-- ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
-- Rely on utf8proc shared libraries where relevant
-- ARROW_ZSTD_USE_SHARED=ON [default=ON]
-- Rely on zstd shared libraries where relevant
-- ARROW_USE_GLOG=OFF [default=OFF]
-- Build libraries with glog support for pluggable logging
-- ARROW_WITH_BACKTRACE=ON [default=ON]
-- Build with backtrace support
-- ARROW_WITH_OPENTELEMETRY=OFF [default=OFF]
-- Build libraries with OpenTelemetry support for distributed tracing
-- ARROW_WITH_BROTLI=OFF [default=OFF]
-- Build with Brotli compression
-- ARROW_WITH_BZ2=OFF [default=OFF]
-- Build with BZ2 compression
-- ARROW_WITH_LZ4=OFF [default=OFF]
-- Build with lz4 compression
-- ARROW_WITH_SNAPPY=OFF [default=OFF]
-- Build with Snappy compression
-- ARROW_WITH_ZLIB=OFF [default=OFF]
-- Build with zlib compression
-- ARROW_WITH_ZSTD=OFF [default=OFF]
-- Build with zstd compression
-- ARROW_WITH_UCX=OFF [default=OFF]
-- Build with UCX transport for Arrow Flight
-- (only used if ARROW_FLIGHT is ON)
-- ARROW_WITH_UTF8PROC=OFF [default=ON]
-- Build with support for Unicode properties using the utf8proc library
-- (only used if ARROW_COMPUTE is ON or ARROW_GANDIVA is ON)
-- ARROW_WITH_RE2=OFF [default=ON]
-- Build with support for regular expressions using the re2 library
-- (only used if ARROW_COMPUTE or ARROW_GANDIVA is ON)
--
-- Parquet options:
--
-- PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF]
-- Depend only on Thirdparty headers to build libparquet.
-- Always OFF if building binaries
-- PARQUET_BUILD_EXECUTABLES=OFF [default=OFF]
-- Build the Parquet executable CLI tools. Requires static libraries to be built.
-- PARQUET_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Parquet examples. Requires static libraries to be built.
-- PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF]
-- Build support for encryption. Fail if OpenSSL is not found
--
-- Gandiva options:
--
-- ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF]
-- Include -static-libstdc++ -static-libgcc when linking with
-- Gandiva static libraries
-- ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""]
-- Compiler flags to append when pre-compiling Gandiva operations
--
-- Advanced developer options:
--
-- ARROW_EXTRA_ERROR_CONTEXT=ON [default=OFF]
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-- Outputting build configuration summary to /home/tdhock/arrow-git/cpp/build/cmake_summary.json
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
ARROW_SIM_LEVEL
-- Build files have been written to: /home/tdhock/arrow-git/cpp/build
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main*)$ CC=$HOME/bin/gcc CXX=$HOME/bin/g++ cmake .. --preset ninja-debug-basic -DCMAKE_INSTALL_PREFIX=$HOME -DARROW_CXXFLAGS=-march=core2 -DARROW_PARQUET=ON -DARROW_SIMD_LEVEL=NONE
Preset CMake variables:
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-- Building using CMake version: 3.22.1
-- Arrow version: 13.0.0 (full: '13.0.0-SNAPSHOT')
-- Arrow SO version: 1300 (full: 1300.0.0)
-- clang-tidy 14 not found
-- clang-format 14 not found
-- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN)
-- infer not found
-- Found cpplint executable at /home/tdhock/arrow-git/cpp/build-support/cpplint.py
-- System processor: x86_64
-- Arrow build warning level: CHECKIN
-- Using ld linker
-- Build Type: DEBUG
-- Using CONDA approach to find dependencies
-- Using CONDA_PREFIX for ARROW_PACKAGE_PREFIX: /home/tdhock/.local/share/r-miniconda/envs/arrow
-- Setting (unset) dependency *_ROOT variables: /home/tdhock/.local/share/r-miniconda/envs/arrow
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-- Boost include dir: /usr/include
-- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required.
-- Found thrift: /home/tdhock/.local/share/r-miniconda/envs/arrow
-- Found libevent include directory: /home/tdhock/.local/share/r-miniconda/envs/arrow/include
-- Found libevent component: /home/tdhock/.local/share/r-miniconda/envs/arrow/lib/libevent_core.so
-- Found libevent component: /home/tdhock/.local/share/r-miniconda/envs/arrow/lib/libevent_extra.so
-- Found libevent component: /home/tdhock/.local/share/r-miniconda/envs/arrow/lib/libevent_openssl.so
-- Found libevent component: /home/tdhock/.local/share/r-miniconda/envs/arrow/lib/libevent_pthreads.so
-- Found libevent 2.1.12 in /home/tdhock/.local/share/r-miniconda/envs/arrow
-- Providing CMake module for ThriftAlt as part of Arrow CMake package
-- Building jemalloc from source
-- Could NOT find GTest (missing: GTest_DIR)
-- Building gtest from source
-- RapidJSON found. Headers: /home/tdhock/.local/share/r-miniconda/envs/arrow/include
-- xsimd found. Headers: /home/tdhock/.local/share/r-miniconda/envs/arrow/include
-- Found hdfs.h at: /home/tdhock/arrow-git/cpp/thirdparty/hadoop/include/hdfs.h
-- All bundled static libraries: jemalloc::jemalloc
-- CMAKE_C_FLAGS: -Wall -Wno-conversion -Wno-sign-conversion -Wunused-result -fno-semantic-interposition -march=core2
-- CMAKE_CXX_FLAGS: -Wno-noexcept-type -fdiagnostics-color=always -Wall -Wno-conversion -Wno-sign-conversion -Wunused-result -fno-semantic-interposition -march=core2
-- CMAKE_C_FLAGS_DEBUG: -g -Werror -O0 -ggdb
-- CMAKE_CXX_FLAGS_DEBUG: -g -Werror -O0 -ggdb
-- ---------------------------------------------------------------------
-- Arrow version: 13.0.0-SNAPSHOT
--
-- Build configuration summary:
-- Generator: Ninja
-- Build type: DEBUG
-- Source directory: /home/tdhock/arrow-git/cpp
-- Install prefix: /home/tdhock
--
-- Compile and link options:
--
-- ARROW_CXXFLAGS=-march=core2 [default=""]
-- Compiler flags to append when compiling Arrow
-- ARROW_BUILD_STATIC=OFF [default=ON]
-- Build static libraries
-- ARROW_BUILD_SHARED=ON [default=ON]
-- Build shared libraries
-- ARROW_PACKAGE_KIND="" [default=""]
-- Arbitrary string that identifies the kind of package
-- (for informational purposes)
-- ARROW_GIT_ID=6d3fe6bda1c3b67b683ada2327194adeed09e9ca [default=""]
-- The Arrow git commit id (if any)
-- ARROW_GIT_DESCRIPTION=apache-arrow-13.0.0.dev-46-g6d3fe6bda-dirty [default=""]
-- The Arrow git commit description (if any)
-- ARROW_NO_DEPRECATED_API=OFF [default=OFF]
-- Exclude deprecated APIs from build
-- ARROW_POSITION_INDEPENDENT_CODE=ON [default=ON]
-- Whether to create position-independent target
-- ARROW_USE_CCACHE=ON [default=ON]
-- Use ccache when compiling (if available)
-- ARROW_USE_SCCACHE=ON [default=ON]
-- Use sccache when compiling (if available),
-- takes precedence over ccache if a storage backend is configured
-- ARROW_USE_LD_GOLD=OFF [default=OFF]
-- Use ld.gold for linking on Linux (if available)
-- ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF]
-- Use precompiled headers when compiling
-- ARROW_SIMD_LEVEL=NONE [default=NONE|SSE4_2|AVX2|AVX512|NEON|SVE|SVE128|SVE256|SVE512|DEFAULT]
-- Compile-time SIMD optimization level
-- ARROW_RUNTIME_SIMD_LEVEL=MAX [default=NONE|SSE4_2|AVX2|AVX512|MAX]
-- Max runtime SIMD optimization level
-- ARROW_ALTIVEC=ON [default=ON]
-- Build with Altivec if compiler has support
-- ARROW_RPATH_ORIGIN=OFF [default=OFF]
-- Build Arrow libraries with RATH set to $ORIGIN
-- ARROW_INSTALL_NAME_RPATH=ON [default=ON]
-- Build Arrow libraries with install_name set to @rpath
-- ARROW_GGDB_DEBUG=ON [default=ON]
-- Pass -ggdb flag to debug builds
-- ARROW_WITH_MUSL=OFF [default=OFF]
-- Whether the system libc is musl or not
--
-- Test and benchmark options:
--
-- ARROW_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Arrow examples
-- ARROW_BUILD_TESTS=ON [default=OFF]
-- Build the Arrow googletest unit tests
-- ARROW_ENABLE_TIMING_TESTS=ON [default=ON]
-- Enable timing-sensitive tests
-- ARROW_BUILD_INTEGRATION=ON [default=OFF]
-- Build the Arrow integration test executables
-- ARROW_BUILD_BENCHMARKS=OFF [default=OFF]
-- Build the Arrow micro benchmarks
-- ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF]
-- Build the Arrow micro reference benchmarks
-- ARROW_BUILD_OPENMP_BENCHMARKS=OFF [default=OFF]
-- Build the Arrow benchmarks that rely on OpenMP
-- ARROW_BUILD_DETAILED_BENCHMARKS=OFF [default=OFF]
-- Build benchmarks that do a longer exploration of performance
-- ARROW_TEST_LINKAGE=shared [default=shared|static]
-- Linkage of Arrow libraries with unit tests executables.
-- ARROW_FUZZING=OFF [default=OFF]
-- Build Arrow Fuzzing executables
-- ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF]
-- Enable unit tests which use large memory
--
-- Lint options:
--
-- ARROW_ONLY_LINT=OFF [default=OFF]
-- Only define the lint and check-format targets
-- ARROW_VERBOSE_LINT=OFF [default=OFF]
-- If off, 'quiet' flags will be passed to linting tools
-- ARROW_GENERATE_COVERAGE=OFF [default=OFF]
-- Build with C++ code coverage enabled
--
-- Checks options:
--
-- ARROW_TEST_MEMCHECK=OFF [default=OFF]
-- Run the test suite using valgrind --tool=memcheck
-- ARROW_USE_ASAN=OFF [default=OFF]
-- Enable Address Sanitizer checks
-- ARROW_USE_TSAN=OFF [default=OFF]
-- Enable Thread Sanitizer checks
-- ARROW_USE_UBSAN=OFF [default=OFF]
-- Enable Undefined Behavior sanitizer checks
--
-- Project component options:
--
-- ARROW_BUILD_UTILITIES=OFF [default=OFF]
-- Build Arrow commandline utilities
-- ARROW_COMPUTE=ON [default=OFF]
-- Build all Arrow Compute kernels
-- ARROW_CSV=ON [default=OFF]
-- Build the Arrow CSV Parser Module
-- ARROW_CUDA=OFF [default=OFF]
-- Build the Arrow CUDA extensions (requires CUDA toolkit)
-- ARROW_DATASET=ON [default=OFF]
-- Build the Arrow Dataset Modules
-- ARROW_FILESYSTEM=ON [default=OFF]
-- Build the Arrow Filesystem Layer
-- ARROW_FLIGHT=OFF [default=OFF]
-- Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers)
-- ARROW_FLIGHT_SQL=OFF [default=OFF]
-- Build the Arrow Flight SQL extension
-- ARROW_GANDIVA=OFF [default=OFF]
-- Build the Gandiva libraries
-- ARROW_GCS=OFF [default=OFF]
-- Build Arrow with GCS support (requires the GCloud SDK for C++)
-- ARROW_HDFS=OFF [default=OFF]
-- Build the Arrow HDFS bridge
-- ARROW_IPC=ON [default=ON]
-- Build the Arrow IPC extensions
-- ARROW_JEMALLOC=ON [default=ON]
-- Build the Arrow jemalloc-based allocator
-- ARROW_JSON=ON [default=OFF]
-- Build Arrow with JSON support (requires RapidJSON)
-- ARROW_MIMALLOC=OFF [default=OFF]
-- Build the Arrow mimalloc-based allocator
-- ARROW_PARQUET=ON [default=OFF]
-- Build the Parquet libraries
-- ARROW_ORC=OFF [default=OFF]
-- Build the Arrow ORC adapter
-- ARROW_PYTHON=OFF [default=OFF]
-- Build some components needed by PyArrow.
-- (This is a deprecated option. Use CMake presets instead.)
-- ARROW_S3=OFF [default=OFF]
-- Build Arrow with S3 support (requires the AWS SDK for C++)
-- ARROW_SKYHOOK=OFF [default=OFF]
-- Build the Skyhook libraries
-- ARROW_SUBSTRAIT=OFF [default=OFF]
-- Build the Arrow Substrait Consumer Module
-- ARROW_ACERO=ON [default=OFF]
-- Build the Arrow Acero Engine Module
-- ARROW_TENSORFLOW=OFF [default=OFF]
-- Build Arrow with TensorFlow support enabled
-- ARROW_TESTING=ON [default=OFF]
-- Build the Arrow testing libraries
--
-- Thirdparty toolchain options:
--
-- ARROW_DEPENDENCY_SOURCE=CONDA [default=AUTO|BUNDLED|SYSTEM|CONDA|VCPKG|BREW]
-- Method to use for acquiring arrow's build dependencies
-- ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF]
-- Show output from ExternalProjects rather than just logging to files
-- ARROW_DEPENDENCY_USE_SHARED=ON [default=ON]
-- Link to shared libraries
-- ARROW_BOOST_USE_SHARED=ON [default=ON]
-- Rely on Boost shared libraries where relevant
-- ARROW_BROTLI_USE_SHARED=ON [default=ON]
-- Rely on Brotli shared libraries where relevant
-- ARROW_BZ2_USE_SHARED=ON [default=ON]
-- Rely on Bz2 shared libraries where relevant
-- ARROW_GFLAGS_USE_SHARED=ON [default=ON]
-- Rely on GFlags shared libraries where relevant
-- ARROW_GRPC_USE_SHARED=ON [default=ON]
-- Rely on gRPC shared libraries where relevant
-- ARROW_JEMALLOC_USE_SHARED=OFF [default=ON]
-- Rely on jemalloc shared libraries where relevant
-- ARROW_LZ4_USE_SHARED=ON [default=ON]
-- Rely on lz4 shared libraries where relevant
-- ARROW_OPENSSL_USE_SHARED=ON [default=ON]
-- Rely on OpenSSL shared libraries where relevant
-- ARROW_PROTOBUF_USE_SHARED=ON [default=ON]
-- Rely on Protocol Buffers shared libraries where relevant
-- ARROW_SNAPPY_USE_SHARED=ON [default=ON]
-- Rely on snappy shared libraries where relevant
-- ARROW_THRIFT_USE_SHARED=OFF [default=ON]
-- Rely on thrift shared libraries where relevant
-- ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
-- Rely on utf8proc shared libraries where relevant
-- ARROW_ZSTD_USE_SHARED=ON [default=ON]
-- Rely on zstd shared libraries where relevant
-- ARROW_USE_GLOG=OFF [default=OFF]
-- Build libraries with glog support for pluggable logging
-- ARROW_WITH_BACKTRACE=ON [default=ON]
-- Build with backtrace support
-- ARROW_WITH_OPENTELEMETRY=OFF [default=OFF]
-- Build libraries with OpenTelemetry support for distributed tracing
-- ARROW_WITH_BROTLI=OFF [default=OFF]
-- Build with Brotli compression
-- ARROW_WITH_BZ2=OFF [default=OFF]
-- Build with BZ2 compression
-- ARROW_WITH_LZ4=OFF [default=OFF]
-- Build with lz4 compression
-- ARROW_WITH_SNAPPY=OFF [default=OFF]
-- Build with Snappy compression
-- ARROW_WITH_ZLIB=OFF [default=OFF]
-- Build with zlib compression
-- ARROW_WITH_ZSTD=OFF [default=OFF]
-- Build with zstd compression
-- ARROW_WITH_UCX=OFF [default=OFF]
-- Build with UCX transport for Arrow Flight
-- (only used if ARROW_FLIGHT is ON)
-- ARROW_WITH_UTF8PROC=OFF [default=ON]
-- Build with support for Unicode properties using the utf8proc library
-- (only used if ARROW_COMPUTE is ON or ARROW_GANDIVA is ON)
-- ARROW_WITH_RE2=OFF [default=ON]
-- Build with support for regular expressions using the re2 library
-- (only used if ARROW_COMPUTE or ARROW_GANDIVA is ON)
--
-- Parquet options:
--
-- PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF]
-- Depend only on Thirdparty headers to build libparquet.
-- Always OFF if building binaries
-- PARQUET_BUILD_EXECUTABLES=OFF [default=OFF]
-- Build the Parquet executable CLI tools. Requires static libraries to be built.
-- PARQUET_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Parquet examples. Requires static libraries to be built.
-- PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF]
-- Build support for encryption. Fail if OpenSSL is not found
--
-- Gandiva options:
--
-- ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF]
-- Include -static-libstdc++ -static-libgcc when linking with
-- Gandiva static libraries
-- ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""]
-- Compiler flags to append when pre-compiling Gandiva operations
--
-- Advanced developer options:
--
-- ARROW_EXTRA_ERROR_CONTEXT=ON [default=OFF]
-- Compile with extra error context (line numbers, code)
-- ARROW_OPTIONAL_INSTALL=OFF [default=OFF]
-- If enabled install ONLY targets that have already been built. Please be
-- advised that if this is enabled 'install' will fail silently on components
-- that have not been built
-- ARROW_GDB_INSTALL_DIR="" [default=""]
-- Use a custom install directory for GDB plugin.
-- In general, you don't need to specify this because the default
-- (CMAKE_INSTALL_FULL_BINDIR on Windows, CMAKE_INSTALL_FULL_LIBDIR otherwise)
-- is reasonable.
-- Outputting build configuration summary to /home/tdhock/arrow-git/cpp/build/cmake_summary.json
-- Configuring done
-- Generating done
-- Build files have been written to: /home/tdhock/arrow-git/cpp/build
(arrow) tdhock@maude-MacBookPro:~/arrow-git/cpp/build(main*)$
```
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[GitHub] [arrow] kou commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "kou (via GitHub)" <gi...@apache.org>.
kou commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1545707886
Could you try this?
```diff
diff --git a/cpp/src/arrow/dataset/api.h b/cpp/src/arrow/dataset/api.h
index c2ebd9d300..a52a704244 100644
--- a/cpp/src/arrow/dataset/api.h
+++ b/cpp/src/arrow/dataset/api.h
@@ -19,6 +19,8 @@
#pragma once
+#include "arrow/util/config.h"
+
#include "arrow/compute/expression.h"
#include "arrow/dataset/dataset.h"
#include "arrow/dataset/discovery.h"
```
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[GitHub] [arrow] tdhock commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "tdhock (via GitHub)" <gi...@apache.org>.
tdhock commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1546258153
thanks that fixes it for me. The solution was not obvious so I wonder if some error / message could be output to make it more obvious? something like "detected a config.h file in a location where it is not expected, please delete it if you experience any problems." It is fine if you want to close this issue now though.
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[GitHub] [arrow] kou commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "kou (via GitHub)" <gi...@apache.org>.
kou commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1546296163
In general, CMake (and other build tool) users should not mix source directory and build directory.
In this case, `config.h` is conflicted but the mixing may cause some other problems.
So I think that "you should not mix source directory and build directory" is enough. And our documents don't show the mixing approach.
If you have any suggestion to improve our documents, feel free to open a new issue and pull request.
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[GitHub] [arrow] tdhock commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "tdhock (via GitHub)" <gi...@apache.org>.
tdhock commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1545844429
adding include "arrow/util/config.h" does not fix the issue for me. I do have that file under my include dir, but it does not contain any directives to define ARROW_CSV or ARROW_PARQUET, is that normal?
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[GitHub] [arrow] kou commented on issue #35566: need -DARROW_PARQUET and -DARROW_CSV to install R package from source with arrow system libraries
Posted by "kou (via GitHub)" <gi...@apache.org>.
kou commented on issue #35566:
URL: https://github.com/apache/arrow/issues/35566#issuecomment-1545855614
And your `arrow/util/config.h`.
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