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Posted to commits@ctakes.apache.org by ja...@apache.org on 2013/08/19 22:59:20 UTC
svn commit: r1515601 - in
/ctakes/branches/ctakes-3.1.0/ctakes-clinical-pipeline: ./ pom.xml
Author: james-masanz
Date: Mon Aug 19 20:59:20 2013
New Revision: 1515601
URL: http://svn.apache.org/r1515601
Log:
merge r1515594 CTAKES-221
Modified:
ctakes/branches/ctakes-3.1.0/ctakes-clinical-pipeline/ (props changed)
ctakes/branches/ctakes-3.1.0/ctakes-clinical-pipeline/pom.xml
Propchange: ctakes/branches/ctakes-3.1.0/ctakes-clinical-pipeline/
------------------------------------------------------------------------------
Merged /ctakes/trunk/ctakes-clinical-pipeline:r1506998-1515596
Modified: ctakes/branches/ctakes-3.1.0/ctakes-clinical-pipeline/pom.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ctakes-3.1.0/ctakes-clinical-pipeline/pom.xml?rev=1515601&r1=1515600&r2=1515601&view=diff
==============================================================================
--- ctakes/branches/ctakes-3.1.0/ctakes-clinical-pipeline/pom.xml (original)
+++ ctakes/branches/ctakes-3.1.0/ctakes-clinical-pipeline/pom.xml Mon Aug 19 20:59:20 2013
@@ -1,230 +1,234 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!-- Licensed to the Apache Software Foundation (ASF) under one or more contributor
- license agreements. See the NOTICE file distributed with this work for additional
- information regarding copyright ownership. The ASF licenses this file to
- you under the Apache License, Version 2.0 (the "License"); you may not use
- this file except in compliance with the License. You may obtain a copy of
- the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required
- by applicable law or agreed to in writing, software distributed under the
- License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS
- OF ANY KIND, either express or implied. See the License for the specific
- language governing permissions and limitations under the License. -->
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
- <modelVersion>4.0.0</modelVersion>
- <artifactId>ctakes-clinical-pipeline</artifactId>
- <name>Apache cTAKES ctakes-clinical-pipeline</name>
- <parent>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes</artifactId>
- <version>3.1.0-SNAPSHOT</version>
- </parent>
-
-
- <dependencies>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-type-system</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-core</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-utils</artifactId>
- </dependency>
- <dependency>
- <groupId>jdom</groupId>
- <artifactId>jdom</artifactId>
- </dependency>
- <dependency>
- <groupId>junit</groupId>
- <artifactId>junit</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-context-tokenizer</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-dictionary-lookup</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-preprocessor</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-lvg</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-chunker</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-ne-contexts</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-pos-tagger</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-assertion</artifactId>
- </dependency>
- <dependency>
- <groupId>org.apache.ctakes</groupId>
- <artifactId>ctakes-dependency-parser</artifactId>
- </dependency>
- </dependencies>
- <profiles>
- <profile>
- <id>runCPE</id>
- <activation>
- <property>
- <name>runCPE</name>
- </property>
- </activation>
- <build>
- <plugins>
- <plugin>
- <groupId>org.codehaus.mojo</groupId>
- <artifactId>exec-maven-plugin</artifactId>
- <version>1.2.1</version>
- <executions>
- <execution>
- <!-- depends on other modules being on classpath -->
- <phase>compile</phase>
- <goals>
- <goal>java</goal>
- </goals>
- </execution>
- </executions>
- <configuration>
- <includeProjectDependencies>true</includeProjectDependencies>
- <includePluginDependencies>true</includePluginDependencies>
- <mainClass>org.apache.uima.tools.cpm.CpmFrame</mainClass>
- <arguments>
- <argument />
- </arguments>
- </configuration>
- <dependencies>
- <!-- System lib dependencies is causing a world of pain. Remove these
- when they're uploaded to Maven Central -->
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-i2b2</artifactId>
- <version>1.2</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-zoner</artifactId>
- <version>1.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-zoner-1.1.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.core</groupId>
- <artifactId>jcarafe.core</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.ext</groupId>
- <artifactId>jcarafe.ext</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>gov.nih.nlm.nls.lvg</groupId>
- <artifactId>lvg2010dist</artifactId>
- <version>0.0.1</version>
- </dependency>
- </dependencies>
- </plugin>
- </plugins>
- </build>
- </profile>
-
- <profile>
- <id>runCVD</id>
- <activation>
- <property>
- <name>runCVD</name>
- </property>
- </activation>
- <build>
- <plugins>
- <plugin>
- <groupId>org.codehaus.mojo</groupId>
- <artifactId>exec-maven-plugin</artifactId>
- <version>1.2.1</version>
- <executions>
- <execution>
- <!-- depends on other modules being on classpath -->
- <phase>compile</phase>
- <goals>
- <goal>java</goal>
- </goals>
- </execution>
- </executions>
- <configuration>
- <includeProjectDependencies>true</includeProjectDependencies>
- <includePluginDependencies>true</includePluginDependencies>
-
- <mainClass>org.apache.uima.tools.cvd.CVD</mainClass>
- <!-- Have to specify at least one parameter otherwise, CVD thinks
- it's an invalid param because MVN passes null when joining to the mvn thread -->
- <arguments>
- <argument>-lookandfeel</argument>
- <argument>javax.swing.plaf.metal.MetalLookAndFeel</argument>
- </arguments>
- </configuration>
- <dependencies>
- <!-- System lib dependencies is causing a world of pain. Remove these
- when they're uploaded to Maven Central -->
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-i2b2</artifactId>
- <version>1.2</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.medfacts</groupId>
- <artifactId>medfacts-zoner</artifactId>
- <version>1.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-zoner-1.1.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.core</groupId>
- <artifactId>jcarafe.core</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>org.mitre.jcarafe.ext</groupId>
- <artifactId>jcarafe.ext</artifactId>
- <version>2.9.1</version>
- <scope>system</scope>
- <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
- </dependency>
- <dependency>
- <groupId>gov.nih.nlm.nls.lvg</groupId>
- <artifactId>lvg2010dist</artifactId>
- <version>0.0.1</version>
- </dependency>
- </dependencies>
- </plugin>
- </plugins>
- </build>
- </profile>
- </profiles>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>
+<!-- Licensed to the Apache Software Foundation (ASF) under one or more contributor
+ license agreements. See the NOTICE file distributed with this work for additional
+ information regarding copyright ownership. The ASF licenses this file to
+ you under the Apache License, Version 2.0 (the "License"); you may not use
+ this file except in compliance with the License. You may obtain a copy of
+ the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required
+ by applicable law or agreed to in writing, software distributed under the
+ License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS
+ OF ANY KIND, either express or implied. See the License for the specific
+ language governing permissions and limitations under the License. -->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+ <artifactId>ctakes-clinical-pipeline</artifactId>
+ <name>Apache cTAKES ctakes-clinical-pipeline</name>
+ <parent>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
+ </parent>
+
+
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-type-system</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-utils</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>jdom</groupId>
+ <artifactId>jdom</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>junit</groupId>
+ <artifactId>junit</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-context-tokenizer</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dictionary-lookup</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-preprocessor</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-lvg</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-chunker</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-ne-contexts</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-pos-tagger</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-assertion</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dependency-parser</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.ctakes</groupId>
+ <artifactId>ctakes-dependency-parser-res</artifactId>
+ </dependency>
+ </dependencies>
+ <profiles>
+ <profile>
+ <id>runCPE</id>
+ <activation>
+ <property>
+ <name>runCPE</name>
+ </property>
+ </activation>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.codehaus.mojo</groupId>
+ <artifactId>exec-maven-plugin</artifactId>
+ <version>1.2.1</version>
+ <executions>
+ <execution>
+ <!-- depends on other modules being on classpath -->
+ <phase>compile</phase>
+ <goals>
+ <goal>java</goal>
+ </goals>
+ </execution>
+ </executions>
+ <configuration>
+ <includeProjectDependencies>true</includeProjectDependencies>
+ <includePluginDependencies>true</includePluginDependencies>
+ <mainClass>org.apache.uima.tools.cpm.CpmFrame</mainClass>
+ <arguments>
+ <argument />
+ </arguments>
+ </configuration>
+ <dependencies>
+ <!-- System lib dependencies is causing a world of pain. Remove these
+ when they're uploaded to Maven Central -->
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-i2b2</artifactId>
+ <version>1.2</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-zoner</artifactId>
+ <version>1.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-zoner-1.1.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.core</groupId>
+ <artifactId>jcarafe.core</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.ext</groupId>
+ <artifactId>jcarafe.ext</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>gov.nih.nlm.nls.lvg</groupId>
+ <artifactId>lvg2010dist</artifactId>
+ <version>0.0.1</version>
+ </dependency>
+ </dependencies>
+ </plugin>
+ </plugins>
+ </build>
+ </profile>
+
+ <profile>
+ <id>runCVD</id>
+ <activation>
+ <property>
+ <name>runCVD</name>
+ </property>
+ </activation>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.codehaus.mojo</groupId>
+ <artifactId>exec-maven-plugin</artifactId>
+ <version>1.2.1</version>
+ <executions>
+ <execution>
+ <!-- depends on other modules being on classpath -->
+ <phase>compile</phase>
+ <goals>
+ <goal>java</goal>
+ </goals>
+ </execution>
+ </executions>
+ <configuration>
+ <includeProjectDependencies>true</includeProjectDependencies>
+ <includePluginDependencies>true</includePluginDependencies>
+
+ <mainClass>org.apache.uima.tools.cvd.CVD</mainClass>
+ <!-- Have to specify at least one parameter otherwise, CVD thinks
+ it's an invalid param because MVN passes null when joining to the mvn thread -->
+ <arguments>
+ <argument>-lookandfeel</argument>
+ <argument>javax.swing.plaf.metal.MetalLookAndFeel</argument>
+ </arguments>
+ </configuration>
+ <dependencies>
+ <!-- System lib dependencies is causing a world of pain. Remove these
+ when they're uploaded to Maven Central -->
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-i2b2</artifactId>
+ <version>1.2</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-i2b2-1.2-SNAPSHOT.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.medfacts</groupId>
+ <artifactId>medfacts-zoner</artifactId>
+ <version>1.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/med-facts-zoner-1.1.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.core</groupId>
+ <artifactId>jcarafe.core</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>org.mitre.jcarafe.ext</groupId>
+ <artifactId>jcarafe.ext</artifactId>
+ <version>2.9.1</version>
+ <scope>system</scope>
+ <systemPath>${project.basedir}/../ctakes-assertion/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar</systemPath>
+ </dependency>
+ <dependency>
+ <groupId>gov.nih.nlm.nls.lvg</groupId>
+ <artifactId>lvg2010dist</artifactId>
+ <version>0.0.1</version>
+ </dependency>
+ </dependencies>
+ </plugin>
+ </plugins>
+ </build>
+ </profile>
+ </profiles>
+</project>