You are viewing a plain text version of this content. The canonical link for it is here.
Posted to commits@taverna.apache.org by st...@apache.org on 2018/01/18 01:04:01 UTC

svn commit: r1821445 [20/21] - in /incubator/taverna/site/trunk/content/javadoc/taverna-server: ./ org/apache/taverna/server/client/ org/apache/taverna/server/client/class-use/ org/apache/taverna/server/client/generic/ org/apache/taverna/server/client/...

Modified: incubator/taverna/site/trunk/content/javadoc/taverna-server/overview-tree.html
URL: http://svn.apache.org/viewvc/incubator/taverna/site/trunk/content/javadoc/taverna-server/overview-tree.html?rev=1821445&r1=1821444&r2=1821445&view=diff
==============================================================================
--- incubator/taverna/site/trunk/content/javadoc/taverna-server/overview-tree.html (original)
+++ incubator/taverna/site/trunk/content/javadoc/taverna-server/overview-tree.html Thu Jan 18 01:03:58 2018
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_151) on Thu Jan 04 17:06:12 GMT 2018 -->
+<!-- Generated by javadoc (1.8.0_151) on Thu Jan 18 00:59:45 GMT 2018 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Class Hierarchy (Apache Taverna Server 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2018-01-04">
+<title>Class Hierarchy (Apache Taverna Server 3.1.0-incubating API)</title>
+<meta name="date" content="2018-01-18">
 <link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
 <script type="text/javascript" src="script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Class Hierarchy (Apache Taverna Server 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Class Hierarchy (Apache Taverna Server 3.1.0-incubating API)";
         }
     }
     catch(err) {
@@ -79,40 +79,40 @@
 <li><a href="org/apache/taverna/server/client/port/package-tree.html">org.apache.taverna.server.client.port</a>, </li>
 <li><a href="org/apache/taverna/server/client/rest/package-tree.html">org.apache.taverna.server.client.rest</a>, </li>
 <li><a href="org/apache/taverna/server/client/wadl/package-tree.html">org.apache.taverna.server.client.wadl</a>, </li>
+<li><a href="org/apache/taverna/server/localworker/api/package-tree.html">org.apache.taverna.server.localworker.api</a>, </li>
+<li><a href="org/apache/taverna/server/localworker/impl/package-tree.html">org.apache.taverna.server.localworker.impl</a>, </li>
+<li><a href="org/apache/taverna/server/localworker/impl/utils/package-tree.html">org.apache.taverna.server.localworker.impl.utils</a>, </li>
+<li><a href="org/apache/taverna/server/localworker/remote/package-tree.html">org.apache.taverna.server.localworker.remote</a>, </li>
+<li><a href="org/apache/taverna/server/localworker/server/package-tree.html">org.apache.taverna.server.localworker.server</a>, </li>
+<li><a href="org/apache/taverna/server/master/package-tree.html">org.apache.taverna.server.master</a>, </li>
+<li><a href="org/apache/taverna/server/master/admin/package-tree.html">org.apache.taverna.server.master.admin</a>, </li>
+<li><a href="org/apache/taverna/server/master/api/package-tree.html">org.apache.taverna.server.master.api</a>, </li>
+<li><a href="org/apache/taverna/server/master/common/package-tree.html">org.apache.taverna.server.master.common</a>, </li>
+<li><a href="org/apache/taverna/server/master/common/version/package-tree.html">org.apache.taverna.server.master.common.version</a>, </li>
+<li><a href="org/apache/taverna/server/master/defaults/package-tree.html">org.apache.taverna.server.master.defaults</a>, </li>
+<li><a href="org/apache/taverna/server/master/exceptions/package-tree.html">org.apache.taverna.server.master.exceptions</a>, </li>
+<li><a href="org/apache/taverna/server/master/facade/package-tree.html">org.apache.taverna.server.master.facade</a>, </li>
+<li><a href="org/apache/taverna/server/master/factories/package-tree.html">org.apache.taverna.server.master.factories</a>, </li>
+<li><a href="org/apache/taverna/server/master/identity/package-tree.html">org.apache.taverna.server.master.identity</a>, </li>
+<li><a href="org/apache/taverna/server/master/interaction/package-tree.html">org.apache.taverna.server.master.interaction</a>, </li>
+<li><a href="org/apache/taverna/server/master/interfaces/package-tree.html">org.apache.taverna.server.master.interfaces</a>, </li>
+<li><a href="org/apache/taverna/server/master/localworker/package-tree.html">org.apache.taverna.server.master.localworker</a>, </li>
+<li><a href="org/apache/taverna/server/master/notification/package-tree.html">org.apache.taverna.server.master.notification</a>, </li>
+<li><a href="org/apache/taverna/server/master/notification/atom/package-tree.html">org.apache.taverna.server.master.notification.atom</a>, </li>
+<li><a href="org/apache/taverna/server/master/rest/package-tree.html">org.apache.taverna.server.master.rest</a>, </li>
+<li><a href="org/apache/taverna/server/master/rest/handler/package-tree.html">org.apache.taverna.server.master.rest.handler</a>, </li>
+<li><a href="org/apache/taverna/server/master/soap/package-tree.html">org.apache.taverna.server.master.soap</a>, </li>
+<li><a href="org/apache/taverna/server/master/usage/package-tree.html">org.apache.taverna.server.master.usage</a>, </li>
+<li><a href="org/apache/taverna/server/master/utils/package-tree.html">org.apache.taverna.server.master.utils</a>, </li>
+<li><a href="org/apache/taverna/server/master/worker/package-tree.html">org.apache.taverna.server.master.worker</a>, </li>
+<li><a href="org/apache/taverna/server/port_description/package-tree.html">org.apache.taverna.server.port_description</a>, </li>
+<li><a href="org/apache/taverna/server/port_description/utils/package-tree.html">org.apache.taverna.server.port_description.utils</a>, </li>
+<li><a href="org/apache/taverna/server/rmidaemon/package-tree.html">org.apache.taverna.server.rmidaemon</a>, </li>
+<li><a href="org/apache/taverna/server/unixforker/package-tree.html">org.apache.taverna.server.unixforker</a>, </li>
 <li><a href="org/apache/taverna/server/usagerecord/package-tree.html">org.apache.taverna.server.usagerecord</a>, </li>
 <li><a href="org/apache/taverna/server/usagerecord/xml/dsig/package-tree.html">org.apache.taverna.server.usagerecord.xml.dsig</a>, </li>
 <li><a href="org/apache/taverna/server/usagerecord/xml/urf/package-tree.html">org.apache.taverna.server.usagerecord.xml.urf</a>, </li>
-<li><a href="org/apache/taverna/server/usagerecord/xml/urf2/package-tree.html">org.apache.taverna.server.usagerecord.xml.urf2</a>, </li>
-<li><a href="org/taverna/server/localworker/api/package-tree.html">org.taverna.server.localworker.api</a>, </li>
-<li><a href="org/taverna/server/localworker/impl/package-tree.html">org.taverna.server.localworker.impl</a>, </li>
-<li><a href="org/taverna/server/localworker/impl/utils/package-tree.html">org.taverna.server.localworker.impl.utils</a>, </li>
-<li><a href="org/taverna/server/localworker/remote/package-tree.html">org.taverna.server.localworker.remote</a>, </li>
-<li><a href="org/taverna/server/localworker/server/package-tree.html">org.taverna.server.localworker.server</a>, </li>
-<li><a href="org/taverna/server/master/package-tree.html">org.taverna.server.master</a>, </li>
-<li><a href="org/taverna/server/master/admin/package-tree.html">org.taverna.server.master.admin</a>, </li>
-<li><a href="org/taverna/server/master/api/package-tree.html">org.taverna.server.master.api</a>, </li>
-<li><a href="org/taverna/server/master/common/package-tree.html">org.taverna.server.master.common</a>, </li>
-<li><a href="org/taverna/server/master/common/version/package-tree.html">org.taverna.server.master.common.version</a>, </li>
-<li><a href="org/taverna/server/master/defaults/package-tree.html">org.taverna.server.master.defaults</a>, </li>
-<li><a href="org/taverna/server/master/exceptions/package-tree.html">org.taverna.server.master.exceptions</a>, </li>
-<li><a href="org/taverna/server/master/facade/package-tree.html">org.taverna.server.master.facade</a>, </li>
-<li><a href="org/taverna/server/master/factories/package-tree.html">org.taverna.server.master.factories</a>, </li>
-<li><a href="org/taverna/server/master/identity/package-tree.html">org.taverna.server.master.identity</a>, </li>
-<li><a href="org/taverna/server/master/interaction/package-tree.html">org.taverna.server.master.interaction</a>, </li>
-<li><a href="org/taverna/server/master/interfaces/package-tree.html">org.taverna.server.master.interfaces</a>, </li>
-<li><a href="org/taverna/server/master/localworker/package-tree.html">org.taverna.server.master.localworker</a>, </li>
-<li><a href="org/taverna/server/master/notification/package-tree.html">org.taverna.server.master.notification</a>, </li>
-<li><a href="org/taverna/server/master/notification/atom/package-tree.html">org.taverna.server.master.notification.atom</a>, </li>
-<li><a href="org/taverna/server/master/rest/package-tree.html">org.taverna.server.master.rest</a>, </li>
-<li><a href="org/taverna/server/master/rest/handler/package-tree.html">org.taverna.server.master.rest.handler</a>, </li>
-<li><a href="org/taverna/server/master/soap/package-tree.html">org.taverna.server.master.soap</a>, </li>
-<li><a href="org/taverna/server/master/usage/package-tree.html">org.taverna.server.master.usage</a>, </li>
-<li><a href="org/taverna/server/master/utils/package-tree.html">org.taverna.server.master.utils</a>, </li>
-<li><a href="org/taverna/server/master/worker/package-tree.html">org.taverna.server.master.worker</a>, </li>
-<li><a href="org/taverna/server/port_description/package-tree.html">org.taverna.server.port_description</a>, </li>
-<li><a href="org/taverna/server/port_description/utils/package-tree.html">org.taverna.server.port_description.utils</a>, </li>
-<li><a href="org/taverna/server/rmidaemon/package-tree.html">org.taverna.server.rmidaemon</a>, </li>
-<li><a href="org/taverna/server/unixforker/package-tree.html">org.taverna.server.unixforker</a></li>
+<li><a href="org/apache/taverna/server/usagerecord/xml/urf2/package-tree.html">org.apache.taverna.server.usagerecord.xml.urf2</a></li>
 </ul>
 </div>
 <div class="contentContainer">
@@ -122,85 +122,85 @@
 <ul>
 <li type="circle">org.apache.cxf.phase.AbstractPhaseInterceptor&lt;T&gt; (implements org.apache.cxf.phase.PhaseInterceptor&lt;T&gt;)
 <ul>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/FlushThreadLocalCacheInterceptor.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">FlushThreadLocalCacheInterceptor</span></a></li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/WSDLHeadOptionsInterceptor.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">WSDLHeadOptionsInterceptor</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/FlushThreadLocalCacheInterceptor.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">FlushThreadLocalCacheInterceptor</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/WSDLHeadOptionsInterceptor.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">WSDLHeadOptionsInterceptor</span></a></li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/AbstractPort.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">AbstractPort</span></a>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/AbstractPort.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">AbstractPort</span></a>
 <ul>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/InputDescription.InputPort.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">InputDescription.InputPort</span></a></li>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/OutputDescription.OutputPort.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">OutputDescription.OutputPort</span></a></li>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/InputDescription.InputPort.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">InputDescription.InputPort</span></a></li>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/OutputDescription.OutputPort.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">OutputDescription.OutputPort</span></a></li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/AbstractPortDescription.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">AbstractPortDescription</span></a>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/AbstractPortDescription.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">AbstractPortDescription</span></a>
 <ul>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/InputDescription.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">InputDescription</span></a></li>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/OutputDescription.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">OutputDescription</span></a></li>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/InputDescription.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">InputDescription</span></a></li>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/OutputDescription.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">OutputDescription</span></a></li>
 </ul>
 </li>
 <li type="circle">org.springframework.security.authentication.dao.AbstractUserDetailsAuthenticationProvider (implements org.springframework.security.authentication.AuthenticationProvider, org.springframework.beans.factory.InitializingBean, org.springframework.context.MessageSourceAware)
 <ul>
-<li type="circle">org.taverna.server.master.identity.<a href="org/taverna/server/master/identity/WorkflowInternalAuthProvider.html" title="class in org.taverna.server.master.identity"><span class="typeNameLink">WorkflowInternalAuthProvider</span></a></li>
+<li type="circle">org.apache.taverna.server.master.identity.<a href="org/apache/taverna/server/master/identity/WorkflowInternalAuthProvider.html" title="class in org.apache.taverna.server.master.identity"><span class="typeNameLink">WorkflowInternalAuthProvider</span></a></li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/AbstractValue.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">AbstractValue</span></a>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/AbstractValue.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">AbstractValue</span></a>
 <ul>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/AbsentValue.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">AbsentValue</span></a></li>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/ErrorValue.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">ErrorValue</span></a></li>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/LeafValue.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">LeafValue</span></a></li>
-<li type="circle">org.taverna.server.port_description.<a href="org/taverna/server/port_description/ListValue.html" title="class in org.taverna.server.port_description"><span class="typeNameLink">ListValue</span></a></li>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/AbsentValue.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">AbsentValue</span></a></li>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/ErrorValue.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">ErrorValue</span></a></li>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/LeafValue.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">LeafValue</span></a></li>
+<li type="circle">org.apache.taverna.server.port_description.<a href="org/apache/taverna/server/port_description/ListValue.html" title="class in org.apache.taverna.server.port_description"><span class="typeNameLink">ListValue</span></a></li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.master.admin.<a href="org/taverna/server/master/admin/Admin.StringList.html" title="class in org.taverna.server.master.admin"><span class="typeNameLink">Admin.StringList</span></a></li>
-<li type="circle">org.taverna.server.master.admin.<a href="org/taverna/server/master/admin/Admin.URList.html" title="class in org.taverna.server.master.admin"><span class="typeNameLink">Admin.URList</span></a></li>
-<li type="circle">org.taverna.server.master.admin.<a href="org/taverna/server/master/admin/Admin.UserDesc.html" title="class in org.taverna.server.master.admin"><span class="typeNameLink">Admin.UserDesc</span></a></li>
-<li type="circle">org.taverna.server.master.admin.<a href="org/taverna/server/master/admin/Admin.UserList.html" title="class in org.taverna.server.master.admin"><span class="typeNameLink">Admin.UserList</span></a></li>
-<li type="circle">org.taverna.server.master.admin.<a href="org/taverna/server/master/admin/AdminBean.html" title="class in org.taverna.server.master.admin"><span class="typeNameLink">AdminBean</span></a> (implements org.taverna.server.master.admin.<a href="org/taverna/server/master/admin/Admin.html" title="interface in org.taverna.server.master.admin">Admin</a>)</li>
-<li type="circle">org.taverna.server.master.notification.atom.<a href="org/taverna/server/master/notification/atom/AtomFeed.html" title="class in org.taverna.server.master.notification.atom"><span class="typeNameLink">AtomFeed</span></a> (implements org.springframework.web.context.ServletContextAware, org.taverna.server.master.rest.<a href="org/taverna/server/master/rest/TavernaServerREST.EventFeed.html" title="interface in org.taverna.server.master.rest">TavernaServerREST.EventFeed</a>, org.taverna.server.master.interfaces.<a href="org/taverna/server/master/interfaces/UriBuilderFactory.html" title="interface in org.taverna.server.master.interfaces">UriBuilderFactory</a>)</li>
-<li type="circle">org.taverna.server.master.identity.<a href="org/taverna/server/master/identity/AuthorityDerivedIDMapper.html" title="class in org.taverna.server.master.identity"><span class="typeNameLink">AuthorityDerivedIDMapper</span></a> (implements org.taverna.server.master.interfaces.<a href="org/taverna/server/master/interfaces/LocalIdentityMapper.html" title="interface in org.taverna.server.master.interfaces">LocalIdentityMapper</a>)</li>
+<li type="circle">org.apache.taverna.server.master.admin.<a href="org/apache/taverna/server/master/admin/Admin.StringList.html" title="class in org.apache.taverna.server.master.admin"><span class="typeNameLink">Admin.StringList</span></a></li>
+<li type="circle">org.apache.taverna.server.master.admin.<a href="org/apache/taverna/server/master/admin/Admin.URList.html" title="class in org.apache.taverna.server.master.admin"><span class="typeNameLink">Admin.URList</span></a></li>
+<li type="circle">org.apache.taverna.server.master.admin.<a href="org/apache/taverna/server/master/admin/Admin.UserDesc.html" title="class in org.apache.taverna.server.master.admin"><span class="typeNameLink">Admin.UserDesc</span></a></li>
+<li type="circle">org.apache.taverna.server.master.admin.<a href="org/apache/taverna/server/master/admin/Admin.UserList.html" title="class in org.apache.taverna.server.master.admin"><span class="typeNameLink">Admin.UserList</span></a></li>
+<li type="circle">org.apache.taverna.server.master.admin.<a href="org/apache/taverna/server/master/admin/AdminBean.html" title="class in org.apache.taverna.server.master.admin"><span class="typeNameLink">AdminBean</span></a> (implements org.apache.taverna.server.master.admin.<a href="org/apache/taverna/server/master/admin/Admin.html" title="interface in org.apache.taverna.server.master.admin">Admin</a>)</li>
+<li type="circle">org.apache.taverna.server.master.notification.atom.<a href="org/apache/taverna/server/master/notification/atom/AtomFeed.html" title="class in org.apache.taverna.server.master.notification.atom"><span class="typeNameLink">AtomFeed</span></a> (implements org.springframework.web.context.ServletContextAware, org.apache.taverna.server.master.rest.<a href="org/apache/taverna/server/master/rest/TavernaServerREST.EventFeed.html" title="interface in org.apache.taverna.server.master.rest">TavernaServerREST.EventFeed</a>, org.apache.taverna.server.master.interfaces.<a href="org/apache/taverna/server/master/interfaces/UriBuilderFactory.html" title="interface in org.apache.taverna.server.master.interfaces">UriBuilderFactory</a>)</li>
+<li type="circle">org.apache.taverna.server.master.identity.<a href="org/apache/taverna/server/master/identity/AuthorityDerivedIDMapper.html" title="class in org.apache.taverna.server.master.identity"><span class="typeNameLink">AuthorityDerivedIDMapper</span></a> (implements org.apache.taverna.server.master.interfaces.<a href="org/apache/taverna/server/master/interfaces/LocalIdentityMapper.html" title="interface in org.apache.taverna.server.master.interfaces">LocalIdentityMapper</a>)</li>
 <li type="circle">org.datanucleus.store.rdbms.adapter.BaseDatastoreAdapter (implements org.datanucleus.store.rdbms.adapter.DatastoreAdapter)
 <ul>
 <li type="circle">org.datanucleus.store.rdbms.adapter.DerbyAdapter
 <ul>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/LoggingDerbyAdapter.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">LoggingDerbyAdapter</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/LoggingDerbyAdapter.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">LoggingDerbyAdapter</span></a></li>
 </ul>
 </li>
 </ul>
 </li>
 <li type="circle">org.apache.commons.dbcp.BasicDataSource (implements javax.sql.<a href="http://docs.oracle.com/javase/7/docs/api/javax/sql/DataSource.html?is-external=true" title="class or interface in javax.sql">DataSource</a>)
 <ul>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/WebappAwareDataSource.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">WebappAwareDataSource</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/WebappAwareDataSource.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">WebappAwareDataSource</span></a></li>
 </ul>
 </li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/BenchmarkType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">BenchmarkType</span></a></li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/CallTimeLogger.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">CallTimeLogger</span></a></li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/CallTimingFilter.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">CallTimingFilter</span></a> (implements javax.servlet.Filter)</li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/CallTimeLogger.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">CallTimeLogger</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/CallTimingFilter.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">CallTimingFilter</span></a> (implements javax.servlet.Filter)</li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.dsig.<a href="org/apache/taverna/server/usagerecord/xml/dsig/CanonicalizationMethodType.html" title="class in org.apache.taverna.server.usagerecord.xml.dsig"><span class="typeNameLink">CanonicalizationMethodType</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/Capabilities.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">Capabilities</span></a></li>
-<li type="circle">org.taverna.server.master.common.<a href="org/taverna/server/master/common/Capability.html" title="class in org.taverna.server.master.common"><span class="typeNameLink">Capability</span></a></li>
+<li type="circle">org.apache.taverna.server.master.common.<a href="org/apache/taverna/server/master/common/Capability.html" title="class in org.apache.taverna.server.master.common"><span class="typeNameLink">Capability</span></a></li>
 <li type="circle">org.apache.taverna.server.client.generic.<a href="org/apache/taverna/server/client/generic/Capability.html" title="class in org.apache.taverna.server.client.generic"><span class="typeNameLink">Capability</span></a></li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/CapabilityLister.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">CapabilityLister</span></a></li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/CertificateChainFetcher.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">CertificateChainFetcher</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/CapabilityLister.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">CapabilityLister</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/CertificateChainFetcher.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">CertificateChainFetcher</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/Charge.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">Charge</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/CloudUsageBlockType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">CloudUsageBlockType</span></a></li>
-<li type="circle">org.taverna.server.master.identity.<a href="org/taverna/server/master/identity/CompositeIDMapper.html" title="class in org.taverna.server.master.identity"><span class="typeNameLink">CompositeIDMapper</span></a> (implements org.springframework.context.ApplicationContextAware, org.taverna.server.master.interfaces.<a href="org/taverna/server/master/interfaces/LocalIdentityMapper.html" title="interface in org.taverna.server.master.interfaces">LocalIdentityMapper</a>)</li>
+<li type="circle">org.apache.taverna.server.master.identity.<a href="org/apache/taverna/server/master/identity/CompositeIDMapper.html" title="class in org.apache.taverna.server.master.identity"><span class="typeNameLink">CompositeIDMapper</span></a> (implements org.springframework.context.ApplicationContextAware, org.apache.taverna.server.master.interfaces.<a href="org/apache/taverna/server/master/interfaces/LocalIdentityMapper.html" title="interface in org.apache.taverna.server.master.interfaces">LocalIdentityMapper</a>)</li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/ComputeUsageBlockType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">ComputeUsageBlockType</span></a></li>
-<li type="circle">org.taverna.server.master.identity.<a href="org/taverna/server/master/identity/ConstantIDMapper.html" title="class in org.taverna.server.master.identity"><span class="typeNameLink">ConstantIDMapper</span></a> (implements org.taverna.server.master.interfaces.<a href="org/taverna/server/master/interfaces/LocalIdentityMapper.html" title="interface in org.taverna.server.master.interfaces">LocalIdentityMapper</a>)</li>
-<li type="circle">org.taverna.server.localworker.api.<a href="org/taverna/server/localworker/api/Constants.html" title="class in org.taverna.server.localworker.api"><span class="typeNameLink">Constants</span></a></li>
+<li type="circle">org.apache.taverna.server.master.identity.<a href="org/apache/taverna/server/master/identity/ConstantIDMapper.html" title="class in org.apache.taverna.server.master.identity"><span class="typeNameLink">ConstantIDMapper</span></a> (implements org.apache.taverna.server.master.interfaces.<a href="org/apache/taverna/server/master/interfaces/LocalIdentityMapper.html" title="interface in org.apache.taverna.server.master.interfaces">LocalIdentityMapper</a>)</li>
+<li type="circle">org.apache.taverna.server.localworker.api.<a href="org/apache/taverna/server/localworker/api/Constants.html" title="class in org.apache.taverna.server.localworker.api"><span class="typeNameLink">Constants</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/ConsumableResourceType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">ConsumableResourceType</span></a>
 <ul>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/PhaseResource.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">PhaseResource</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/VolumeResource.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">VolumeResource</span></a></li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.master.<a href="org/taverna/server/master/ContentsDescriptorBuilder.html" title="class in org.taverna.server.master"><span class="typeNameLink">ContentsDescriptorBuilder</span></a></li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/Contextualizer.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">Contextualizer</span></a> (implements org.springframework.web.context.ServletContextAware)</li>
+<li type="circle">org.apache.taverna.server.master.<a href="org/apache/taverna/server/master/ContentsDescriptorBuilder.html" title="class in org.apache.taverna.server.master"><span class="typeNameLink">ContentsDescriptorBuilder</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/Contextualizer.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">Contextualizer</span></a> (implements org.springframework.web.context.ServletContextAware)</li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/CpuDuration.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">CpuDuration</span></a></li>
-<li type="circle">org.taverna.server.master.common.<a href="org/taverna/server/master/common/Credential.html" title="class in org.taverna.server.master.common"><span class="typeNameLink">Credential</span></a> (implements java.io.<a href="http://docs.oracle.com/javase/7/docs/api/java/io/Serializable.html?is-external=true" title="class or interface in java.io">Serializable</a>)
+<li type="circle">org.apache.taverna.server.master.common.<a href="org/apache/taverna/server/master/common/Credential.html" title="class in org.apache.taverna.server.master.common"><span class="typeNameLink">Credential</span></a> (implements java.io.<a href="http://docs.oracle.com/javase/7/docs/api/java/io/Serializable.html?is-external=true" title="class or interface in java.io">Serializable</a>)
 <ul>
-<li type="circle">org.taverna.server.master.common.<a href="org/taverna/server/master/common/Credential.Dummy.html" title="class in org.taverna.server.master.common"><span class="typeNameLink">Credential.Dummy</span></a></li>
-<li type="circle">org.taverna.server.master.common.<a href="org/taverna/server/master/common/Credential.KeyPair.html" title="class in org.taverna.server.master.common"><span class="typeNameLink">Credential.KeyPair</span></a></li>
-<li type="circle">org.taverna.server.master.common.<a href="org/taverna/server/master/common/Credential.Password.html" title="class in org.taverna.server.master.common"><span class="typeNameLink">Credential.Password</span></a></li>
+<li type="circle">org.apache.taverna.server.master.common.<a href="org/apache/taverna/server/master/common/Credential.Dummy.html" title="class in org.apache.taverna.server.master.common"><span class="typeNameLink">Credential.Dummy</span></a></li>
+<li type="circle">org.apache.taverna.server.master.common.<a href="org/apache/taverna/server/master/common/Credential.KeyPair.html" title="class in org.apache.taverna.server.master.common"><span class="typeNameLink">Credential.KeyPair</span></a></li>
+<li type="circle">org.apache.taverna.server.master.common.<a href="org/apache/taverna/server/master/common/Credential.Password.html" title="class in org.apache.taverna.server.master.common"><span class="typeNameLink">Credential.Password</span></a></li>
 </ul>
 </li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/Credential.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">Credential</span></a></li>
@@ -211,9 +211,9 @@
 <li type="circle">org.apache.taverna.server.client.generic.<a href="org/apache/taverna/server/client/generic/PasswordCredential.html" title="class in org.apache.taverna.server.client.generic"><span class="typeNameLink">PasswordCredential</span></a></li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/DerbyUtils.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">DerbyUtils</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/DerbyUtils.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">DerbyUtils</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.dsig.<a href="org/apache/taverna/server/usagerecord/xml/dsig/DigestMethodType.html" title="class in org.apache.taverna.server.usagerecord.xml.dsig"><span class="typeNameLink">DigestMethodType</span></a></li>
-<li type="circle">org.taverna.server.master.rest.<a href="org/taverna/server/master/rest/DirectoryContents.html" title="class in org.taverna.server.master.rest"><span class="typeNameLink">DirectoryContents</span></a></li>
+<li type="circle">org.apache.taverna.server.master.rest.<a href="org/apache/taverna/server/master/rest/DirectoryContents.html" title="class in org.apache.taverna.server.master.rest"><span class="typeNameLink">DirectoryContents</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/DirectoryContents.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">DirectoryContents</span></a></li>
 <li type="circle">org.apache.taverna.server.client.generic.<a href="org/apache/taverna/server/client/generic/DirectoryEntry.html" title="class in org.apache.taverna.server.client.generic"><span class="typeNameLink">DirectoryEntry</span></a>
 <ul>
@@ -221,10 +221,10 @@
 <li type="circle">org.apache.taverna.server.client.generic.<a href="org/apache/taverna/server/client/generic/FileReference.html" title="class in org.apache.taverna.server.client.generic"><span class="typeNameLink">FileReference</span></a></li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.master.soap.<a href="org/taverna/server/master/soap/DirEntry.html" title="class in org.taverna.server.master.soap"><span class="typeNameLink">DirEntry</span></a>
+<li type="circle">org.apache.taverna.server.master.soap.<a href="org/apache/taverna/server/master/soap/DirEntry.html" title="class in org.apache.taverna.server.master.soap"><span class="typeNameLink">DirEntry</span></a>
 <ul>
-<li type="circle">org.taverna.server.master.soap.<a href="org/taverna/server/master/soap/DirEntry.Directory.html" title="class in org.taverna.server.master.soap"><span class="typeNameLink">DirEntry.Directory</span></a></li>
-<li type="circle">org.taverna.server.master.soap.<a href="org/taverna/server/master/soap/DirEntry.File.html" title="class in org.taverna.server.master.soap"><span class="typeNameLink">DirEntry.File</span></a></li>
+<li type="circle">org.apache.taverna.server.master.soap.<a href="org/apache/taverna/server/master/soap/DirEntry.Directory.html" title="class in org.apache.taverna.server.master.soap"><span class="typeNameLink">DirEntry.Directory</span></a></li>
+<li type="circle">org.apache.taverna.server.master.soap.<a href="org/apache/taverna/server/master/soap/DirEntry.File.html" title="class in org.apache.taverna.server.master.soap"><span class="typeNameLink">DirEntry.File</span></a></li>
 </ul>
 </li>
 <li type="circle">org.apache.taverna.server.client.<a href="org/apache/taverna/server/client/DirEntry.html" title="class in org.apache.taverna.server.client"><span class="typeNameLink">DirEntry</span></a>
@@ -233,29 +233,29 @@
 <li type="circle">org.apache.taverna.server.client.<a href="org/apache/taverna/server/client/File.html" title="class in org.apache.taverna.server.client"><span class="typeNameLink">File</span></a></li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.master.common.<a href="org/taverna/server/master/common/DirEntryReference.html" title="class in org.taverna.server.master.common"><span class="typeNameLink">DirEntryReference</span></a>
+<li type="circle">org.apache.taverna.server.master.common.<a href="org/apache/taverna/server/master/common/DirEntryReference.html" title="class in org.apache.taverna.server.master.common"><span class="typeNameLink">DirEntryReference</span></a>
 <ul>
-<li type="circle">org.taverna.server.master.common.<a href="org/taverna/server/master/common/DirEntryReference.DirectoryReference.html" title="class in org.taverna.server.master.common"><span class="typeNameLink">DirEntryReference.DirectoryReference</span></a></li>
-<li type="circle">org.taverna.server.master.common.<a href="org/taverna/server/master/common/DirEntryReference.FileReference.html" title="class in org.taverna.server.master.common"><span class="typeNameLink">DirEntryReference.FileReference</span></a></li>
+<li type="circle">org.apache.taverna.server.master.common.<a href="org/apache/taverna/server/master/common/DirEntryReference.DirectoryReference.html" title="class in org.apache.taverna.server.master.common"><span class="typeNameLink">DirEntryReference.DirectoryReference</span></a></li>
+<li type="circle">org.apache.taverna.server.master.common.<a href="org/apache/taverna/server/master/common/DirEntryReference.FileReference.html" title="class in org.apache.taverna.server.master.common"><span class="typeNameLink">DirEntryReference.FileReference</span></a></li>
 </ul>
 </li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/Disk.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">Disk</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.dsig.<a href="org/apache/taverna/server/usagerecord/xml/dsig/DSAKeyValueType.html" title="class in org.apache.taverna.server.usagerecord.xml.dsig"><span class="typeNameLink">DSAKeyValueType</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/EnabledNotificationFabrics.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">EnabledNotificationFabrics</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/EndTime.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">EndTime</span></a></li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/EntryHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">EntryHandler</span></a> (implements javax.ws.rs.ext.MessageBodyReader&lt;T&gt;, javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
-<li type="circle">org.taverna.server.master.notification.atom.<a href="org/taverna/server/master/notification/atom/Event.html" title="class in org.taverna.server.master.notification.atom"><span class="typeNameLink">Event</span></a> (implements java.io.<a href="http://docs.oracle.com/javase/7/docs/api/java/io/Serializable.html?is-external=true" title="class or interface in java.io">Serializable</a>)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/EntryHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">EntryHandler</span></a> (implements javax.ws.rs.ext.MessageBodyReader&lt;T&gt;, javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.notification.atom.<a href="org/apache/taverna/server/master/notification/atom/Event.html" title="class in org.apache.taverna.server.master.notification.atom"><span class="typeNameLink">Event</span></a> (implements java.io.<a href="http://docs.oracle.com/javase/7/docs/api/java/io/Serializable.html?is-external=true" title="class or interface in java.io">Serializable</a>)</li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/ExecutionHostType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">ExecutionHostType</span></a></li>
-<li type="circle">org.taverna.server.master.facade.<a href="org/taverna/server/master/facade/Facade.html" title="class in org.taverna.server.master.facade"><span class="typeNameLink">Facade</span></a></li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/FeedHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">FeedHandler</span></a> (implements javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
-<li type="circle">org.taverna.server.master.<a href="org/taverna/server/master/FileConcatenation.html" title="class in org.taverna.server.master"><span class="typeNameLink">FileConcatenation</span></a> (implements java.lang.<a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Iterable.html?is-external=true" title="class or interface in java.lang">Iterable</a>&lt;T&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/FileConcatenationHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">FileConcatenationHandler</span></a> (implements javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
-<li type="circle">org.taverna.server.master.soap.<a href="org/taverna/server/master/soap/FileContents.html" title="class in org.taverna.server.master.soap"><span class="typeNameLink">FileContents</span></a></li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/FileMessageHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">FileMessageHandler</span></a> (implements javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/FilenameUtils.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">FilenameUtils</span></a></li>
-<li type="circle">org.taverna.server.localworker.impl.utils.<a href="org/taverna/server/localworker/impl/utils/FilenameVerifier.html" title="class in org.taverna.server.localworker.impl.utils"><span class="typeNameLink">FilenameVerifier</span></a></li>
-<li type="circle">org.taverna.server.master.rest.<a href="org/taverna/server/master/rest/FileSegment.html" title="class in org.taverna.server.master.rest"><span class="typeNameLink">FileSegment</span></a></li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/FileSegmentHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">FileSegmentHandler</span></a> (implements javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.facade.<a href="org/apache/taverna/server/master/facade/Facade.html" title="class in org.apache.taverna.server.master.facade"><span class="typeNameLink">Facade</span></a></li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/FeedHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">FeedHandler</span></a> (implements javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.<a href="org/apache/taverna/server/master/FileConcatenation.html" title="class in org.apache.taverna.server.master"><span class="typeNameLink">FileConcatenation</span></a> (implements java.lang.<a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Iterable.html?is-external=true" title="class or interface in java.lang">Iterable</a>&lt;T&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/FileConcatenationHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">FileConcatenationHandler</span></a> (implements javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.soap.<a href="org/apache/taverna/server/master/soap/FileContents.html" title="class in org.apache.taverna.server.master.soap"><span class="typeNameLink">FileContents</span></a></li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/FileMessageHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">FileMessageHandler</span></a> (implements javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/FilenameUtils.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">FilenameUtils</span></a></li>
+<li type="circle">org.apache.taverna.server.localworker.impl.utils.<a href="org/apache/taverna/server/localworker/impl/utils/FilenameVerifier.html" title="class in org.apache.taverna.server.localworker.impl.utils"><span class="typeNameLink">FilenameVerifier</span></a></li>
+<li type="circle">org.apache.taverna.server.master.rest.<a href="org/apache/taverna/server/master/rest/FileSegment.html" title="class in org.apache.taverna.server.master.rest"><span class="typeNameLink">FileSegment</span></a></li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/FileSegmentHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">FileSegmentHandler</span></a> (implements javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/FilesystemCreationOperation.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">FilesystemCreationOperation</span></a>
 <ul>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/MakeDirectory.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">MakeDirectory</span></a></li>
@@ -263,71 +263,71 @@
 </ul>
 </li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/GlobalGroupAttributeType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">GlobalGroupAttributeType</span></a></li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/HandlerCore.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">HandlerCore</span></a>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/HandlerCore.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">HandlerCore</span></a>
 <ul>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/AccessDeniedHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">AccessDeniedHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/BadInputPortNameHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">BadInputPortNameHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/BadPropertyValueHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">BadPropertyValueHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/BadStateChangeHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">BadStateChangeHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/FilesystemAccessHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">FilesystemAccessHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/GeneralFailureHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">GeneralFailureHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/IllegalArgumentHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">IllegalArgumentHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/ImplementationProblemHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">ImplementationProblemHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/InvalidCredentialHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">InvalidCredentialHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/JAXBExceptionHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">JAXBExceptionHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/NoCreateHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">NoCreateHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/NoCredentialHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">NoCredentialHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/NoDestroyHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">NoDestroyHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/NoDirectoryEntryHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">NoDirectoryEntryHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/NoListenerHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">NoListenerHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/NotOwnerHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">NotOwnerHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/NoUpdateHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">NoUpdateHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/OverloadedHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">OverloadedHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/UnknownRunHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">UnknownRunHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/AccessDeniedHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">AccessDeniedHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/BadInputPortNameHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">BadInputPortNameHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/BadPropertyValueHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">BadPropertyValueHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/BadStateChangeHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">BadStateChangeHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/FilesystemAccessHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">FilesystemAccessHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/GeneralFailureHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">GeneralFailureHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/IllegalArgumentHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">IllegalArgumentHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/ImplementationProblemHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">ImplementationProblemHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/InvalidCredentialHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">InvalidCredentialHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/JAXBExceptionHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">JAXBExceptionHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/NoCreateHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">NoCreateHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/NoCredentialHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">NoCredentialHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/NoDestroyHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">NoDestroyHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/NoDirectoryEntryHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">NoDirectoryEntryHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/NoListenerHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">NoListenerHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/NotOwnerHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">NotOwnerHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/NoUpdateHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">NoUpdateHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/OverloadedHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">OverloadedHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/UnknownRunHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">UnknownRunHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
 </ul>
 </li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/Host.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">Host</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/HostnameType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">HostnameType</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/InfrastructureType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">InfrastructureType</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/InputDescription.File.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">InputDescription.File</span></a></li>
-<li type="circle">org.taverna.server.master.common.<a href="org/taverna/server/master/common/InputDescription.Port.html" title="class in org.taverna.server.master.common"><span class="typeNameLink">InputDescription.Port</span></a></li>
+<li type="circle">org.apache.taverna.server.master.common.<a href="org/apache/taverna/server/master/common/InputDescription.Port.html" title="class in org.apache.taverna.server.master.common"><span class="typeNameLink">InputDescription.Port</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/InputDescription.Reference.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">InputDescription.Reference</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/InputDescription.Value.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">InputDescription.Value</span></a></li>
 <li type="circle">java.io.<a href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true" title="class or interface in java.io"><span class="typeNameLink">InputStream</span></a> (implements java.io.<a href="http://docs.oracle.com/javase/7/docs/api/java/io/Closeable.html?is-external=true" title="class or interface in java.io">Closeable</a>)
 <ul>
 <li type="circle">java.io.<a href="http://docs.oracle.com/javase/7/docs/api/java/io/PipedInputStream.html?is-external=true" title="class or interface in java.io"><span class="typeNameLink">PipedInputStream</span></a>
 <ul>
-<li type="circle">org.taverna.server.master.interfaces.<a href="org/taverna/server/master/interfaces/Directory.ZipStream.html" title="class in org.taverna.server.master.interfaces"><span class="typeNameLink">Directory.ZipStream</span></a></li>
+<li type="circle">org.apache.taverna.server.master.interfaces.<a href="org/apache/taverna/server/master/interfaces/Directory.ZipStream.html" title="class in org.apache.taverna.server.master.interfaces"><span class="typeNameLink">Directory.ZipStream</span></a></li>
 </ul>
 </li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/InputStreamMessageHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">InputStreamMessageHandler</span></a> (implements javax.ws.rs.ext.MessageBodyReader&lt;T&gt;)</li>
-<li type="circle">org.taverna.server.master.<a href="org/taverna/server/master/InteractionFeed.html" title="class in org.taverna.server.master"><span class="typeNameLink">InteractionFeed</span></a> (implements org.taverna.server.master.api.<a href="org/taverna/server/master/api/FeedBean.html" title="interface in org.taverna.server.master.api">FeedBean</a>, org.taverna.server.master.rest.<a href="org/taverna/server/master/rest/InteractionFeedREST.html" title="interface in org.taverna.server.master.rest">InteractionFeedREST</a>)</li>
-<li type="circle">org.taverna.server.master.interaction.<a href="org/taverna/server/master/interaction/InteractionFeedSupport.html" title="class in org.taverna.server.master.interaction"><span class="typeNameLink">InteractionFeedSupport</span></a></li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/InvocationCounter.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">InvocationCounter</span></a></li>
-<li type="circle">org.taverna.server.master.notification.<a href="org/taverna/server/master/notification/JabberDispatcher.html" title="class in org.taverna.server.master.notification"><span class="typeNameLink">JabberDispatcher</span></a> (implements org.taverna.server.master.interfaces.<a href="org/taverna/server/master/interfaces/MessageDispatcher.html" title="interface in org.taverna.server.master.interfaces">MessageDispatcher</a>)</li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/JCECheck.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">JCECheck</span></a></li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/JDOSupport.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">JDOSupport</span></a>&lt;T&gt;
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/InputStreamMessageHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">InputStreamMessageHandler</span></a> (implements javax.ws.rs.ext.MessageBodyReader&lt;T&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.<a href="org/apache/taverna/server/master/InteractionFeed.html" title="class in org.apache.taverna.server.master"><span class="typeNameLink">InteractionFeed</span></a> (implements org.apache.taverna.server.master.api.<a href="org/apache/taverna/server/master/api/FeedBean.html" title="interface in org.apache.taverna.server.master.api">FeedBean</a>, org.apache.taverna.server.master.rest.<a href="org/apache/taverna/server/master/rest/InteractionFeedREST.html" title="interface in org.apache.taverna.server.master.rest">InteractionFeedREST</a>)</li>
+<li type="circle">org.apache.taverna.server.master.interaction.<a href="org/apache/taverna/server/master/interaction/InteractionFeedSupport.html" title="class in org.apache.taverna.server.master.interaction"><span class="typeNameLink">InteractionFeedSupport</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/InvocationCounter.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">InvocationCounter</span></a></li>
+<li type="circle">org.apache.taverna.server.master.notification.<a href="org/apache/taverna/server/master/notification/JabberDispatcher.html" title="class in org.apache.taverna.server.master.notification"><span class="typeNameLink">JabberDispatcher</span></a> (implements org.apache.taverna.server.master.interfaces.<a href="org/apache/taverna/server/master/interfaces/MessageDispatcher.html" title="interface in org.apache.taverna.server.master.interfaces">MessageDispatcher</a>)</li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/JCECheck.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">JCECheck</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/JDOSupport.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">JDOSupport</span></a>&lt;T&gt;
 <ul>
-<li type="circle">org.taverna.server.master.notification.atom.<a href="org/taverna/server/master/notification/atom/EventDAO.html" title="class in org.taverna.server.master.notification.atom"><span class="typeNameLink">EventDAO</span></a> (implements org.taverna.server.master.interfaces.<a href="org/taverna/server/master/interfaces/MessageDispatcher.html" title="interface in org.taverna.server.master.interfaces">MessageDispatcher</a>)</li>
-<li type="circle">org.taverna.server.master.localworker.<a href="org/taverna/server/master/localworker/LocalWorkerState.html" title="class in org.taverna.server.master.localworker"><span class="typeNameLink">LocalWorkerState</span></a> (implements org.taverna.server.master.worker.<a href="org/taverna/server/master/worker/WorkerModel.html" title="interface in org.taverna.server.master.worker">WorkerModel</a>)</li>
-<li type="circle">org.taverna.server.master.worker.<a href="org/taverna/server/master/worker/RunDatabaseDAO.html" title="class in org.taverna.server.master.worker"><span class="typeNameLink">RunDatabaseDAO</span></a></li>
-<li type="circle">org.taverna.server.master.usage.<a href="org/taverna/server/master/usage/UsageRecordRecorder.html" title="class in org.taverna.server.master.usage"><span class="typeNameLink">UsageRecordRecorder</span></a></li>
-<li type="circle">org.taverna.server.master.identity.<a href="org/taverna/server/master/identity/UserStore.html" title="class in org.taverna.server.master.identity"><span class="typeNameLink">UserStore</span></a> (implements org.springframework.security.core.userdetails.UserDetailsService, org.taverna.server.master.identity.<a href="org/taverna/server/master/identity/UserStoreAPI.html" title="interface in org.taverna.server.master.identity">UserStoreAPI</a>)</li>
+<li type="circle">org.apache.taverna.server.master.notification.atom.<a href="org/apache/taverna/server/master/notification/atom/EventDAO.html" title="class in org.apache.taverna.server.master.notification.atom"><span class="typeNameLink">EventDAO</span></a> (implements org.apache.taverna.server.master.interfaces.<a href="org/apache/taverna/server/master/interfaces/MessageDispatcher.html" title="interface in org.apache.taverna.server.master.interfaces">MessageDispatcher</a>)</li>
+<li type="circle">org.apache.taverna.server.master.localworker.<a href="org/apache/taverna/server/master/localworker/LocalWorkerState.html" title="class in org.apache.taverna.server.master.localworker"><span class="typeNameLink">LocalWorkerState</span></a> (implements org.apache.taverna.server.master.worker.<a href="org/apache/taverna/server/master/worker/WorkerModel.html" title="interface in org.apache.taverna.server.master.worker">WorkerModel</a>)</li>
+<li type="circle">org.apache.taverna.server.master.worker.<a href="org/apache/taverna/server/master/worker/RunDatabaseDAO.html" title="class in org.apache.taverna.server.master.worker"><span class="typeNameLink">RunDatabaseDAO</span></a></li>
+<li type="circle">org.apache.taverna.server.master.usage.<a href="org/apache/taverna/server/master/usage/UsageRecordRecorder.html" title="class in org.apache.taverna.server.master.usage"><span class="typeNameLink">UsageRecordRecorder</span></a></li>
+<li type="circle">org.apache.taverna.server.master.identity.<a href="org/apache/taverna/server/master/identity/UserStore.html" title="class in org.apache.taverna.server.master.identity"><span class="typeNameLink">UserStore</span></a> (implements org.springframework.security.core.userdetails.UserDetailsService, org.apache.taverna.server.master.identity.<a href="org/apache/taverna/server/master/identity/UserStoreAPI.html" title="interface in org.apache.taverna.server.master.identity">UserStoreAPI</a>)</li>
 </ul>
 </li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/JDOSupport.PersistenceManagerBuilder.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">JDOSupport.PersistenceManagerBuilder</span></a></li>
-<li type="circle">org.taverna.server.master.utils.<a href="org/taverna/server/master/utils/JDOSupport.TransactionAspect.html" title="class in org.taverna.server.master.utils"><span class="typeNameLink">JDOSupport.TransactionAspect</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/JDOSupport.PersistenceManagerBuilder.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">JDOSupport.PersistenceManagerBuilder</span></a></li>
+<li type="circle">org.apache.taverna.server.master.utils.<a href="org/apache/taverna/server/master/utils/JDOSupport.TransactionAspect.html" title="class in org.apache.taverna.server.master.utils"><span class="typeNameLink">JDOSupport.TransactionAspect</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/JobIdentity.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">JobIdentity</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/JobName.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">JobName</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/JobUsageBlockType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">JobUsageBlockType</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.dsig.<a href="org/apache/taverna/server/usagerecord/xml/dsig/KeyInfoType.html" title="class in org.apache.taverna.server.usagerecord.xml.dsig"><span class="typeNameLink">KeyInfoType</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.dsig.<a href="org/apache/taverna/server/usagerecord/xml/dsig/KeyValueType.html" title="class in org.apache.taverna.server.usagerecord.xml.dsig"><span class="typeNameLink">KeyValueType</span></a></li>
-<li type="circle">org.taverna.server.master.rest.<a href="org/taverna/server/master/rest/ListenerDefinition.html" title="class in org.taverna.server.master.rest"><span class="typeNameLink">ListenerDefinition</span></a></li>
+<li type="circle">org.apache.taverna.server.master.rest.<a href="org/apache/taverna/server/master/rest/ListenerDefinition.html" title="class in org.apache.taverna.server.master.rest"><span class="typeNameLink">ListenerDefinition</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/ListenerDefinition.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">ListenerDefinition</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/ListenerDescription.Properties.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">ListenerDescription.Properties</span></a></li>
-<li type="circle">org.taverna.server.master.localworker.<a href="org/taverna/server/master/localworker/LocalWorkerFactory.html" title="class in org.taverna.server.master.localworker"><span class="typeNameLink">LocalWorkerFactory</span></a></li>
+<li type="circle">org.apache.taverna.server.master.localworker.<a href="org/apache/taverna/server/master/localworker/LocalWorkerFactory.html" title="class in org.apache.taverna.server.master.localworker"><span class="typeNameLink">LocalWorkerFactory</span></a></li>
 <li type="circle">org.apache.taverna.server.client.generic.<a href="org/apache/taverna/server/client/generic/Location.html" title="class in org.apache.taverna.server.client.generic"><span class="typeNameLink">Location</span></a>
 <ul>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/LinkedPermissionDescription.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">LinkedPermissionDescription</span></a></li>
@@ -336,24 +336,24 @@
 </ul>
 </li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/MachineName.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">MachineName</span></a></li>
-<li type="circle">org.taverna.server.master.rest.<a href="org/taverna/server/master/rest/MakeOrUpdateDirEntry.html" title="class in org.taverna.server.master.rest"><span class="typeNameLink">MakeOrUpdateDirEntry</span></a>
+<li type="circle">org.apache.taverna.server.master.rest.<a href="org/apache/taverna/server/master/rest/MakeOrUpdateDirEntry.html" title="class in org.apache.taverna.server.master.rest"><span class="typeNameLink">MakeOrUpdateDirEntry</span></a>
 <ul>
-<li type="circle">org.taverna.server.master.rest.<a href="org/taverna/server/master/rest/MakeOrUpdateDirEntry.MakeDirectory.html" title="class in org.taverna.server.master.rest"><span class="typeNameLink">MakeOrUpdateDirEntry.MakeDirectory</span></a></li>
-<li type="circle">org.taverna.server.master.rest.<a href="org/taverna/server/master/rest/MakeOrUpdateDirEntry.SetFileContents.html" title="class in org.taverna.server.master.rest"><span class="typeNameLink">MakeOrUpdateDirEntry.SetFileContents</span></a></li>
+<li type="circle">org.apache.taverna.server.master.rest.<a href="org/apache/taverna/server/master/rest/MakeOrUpdateDirEntry.MakeDirectory.html" title="class in org.apache.taverna.server.master.rest"><span class="typeNameLink">MakeOrUpdateDirEntry.MakeDirectory</span></a></li>
+<li type="circle">org.apache.taverna.server.master.rest.<a href="org/apache/taverna/server/master/rest/MakeOrUpdateDirEntry.SetFileContents.html" title="class in org.apache.taverna.server.master.rest"><span class="typeNameLink">MakeOrUpdateDirEntry.SetFileContents</span></a></li>
 </ul>
 </li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.dsig.<a href="org/apache/taverna/server/usagerecord/xml/dsig/ManifestType.html" title="class in org.apache.taverna.server.usagerecord.xml.dsig"><span class="typeNameLink">ManifestType</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/Memory.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">Memory</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/MemoryUsageBlockType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">MemoryUsageBlockType</span></a></li>
-<li type="circle">org.taverna.server.master.identity.<a href="org/taverna/server/master/identity/NameIDMapper.html" title="class in org.taverna.server.master.identity"><span class="typeNameLink">NameIDMapper</span></a> (implements org.taverna.server.master.interfaces.<a href="org/taverna/server/master/interfaces/LocalIdentityMapper.html" title="interface in org.taverna.server.master.interfaces">LocalIdentityMapper</a>)</li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/NegotiationFailedHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">NegotiationFailedHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.identity.<a href="org/apache/taverna/server/master/identity/NameIDMapper.html" title="class in org.apache.taverna.server.master.identity"><span class="typeNameLink">NameIDMapper</span></a> (implements org.apache.taverna.server.master.interfaces.<a href="org/apache/taverna/server/master/interfaces/LocalIdentityMapper.html" title="interface in org.apache.taverna.server.master.interfaces">LocalIdentityMapper</a>)</li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/NegotiationFailedHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">NegotiationFailedHandler</span></a> (implements javax.ws.rs.ext.ExceptionMapper&lt;E&gt;)</li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/Network.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">Network</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/NetworkClassType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">NetworkClassType</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/NetworkInboundUsedType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">NetworkInboundUsedType</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/NetworkOutboundUsedType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">NetworkOutboundUsedType</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/NetworkUsageBlockType.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">NetworkUsageBlockType</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/NodeCount.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">NodeCount</span></a></li>
-<li type="circle">org.taverna.server.master.notification.<a href="org/taverna/server/master/notification/NotificationEngine.html" title="class in org.taverna.server.master.notification"><span class="typeNameLink">NotificationEngine</span></a></li>
+<li type="circle">org.apache.taverna.server.master.notification.<a href="org/apache/taverna/server/master/notification/NotificationEngine.html" title="class in org.apache.taverna.server.master.notification"><span class="typeNameLink">NotificationEngine</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/ObjectFactory.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">ObjectFactory</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf2.<a href="org/apache/taverna/server/usagerecord/xml/urf2/ObjectFactory.html" title="class in org.apache.taverna.server.usagerecord.xml.urf2"><span class="typeNameLink">ObjectFactory</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.dsig.<a href="org/apache/taverna/server/usagerecord/xml/dsig/ObjectFactory.html" title="class in org.apache.taverna.server.usagerecord.xml.dsig"><span class="typeNameLink">ObjectFactory</span></a></li>
@@ -361,11 +361,11 @@
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/ObjectFactory.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">ObjectFactory</span></a></li>
 <li type="circle">org.apache.taverna.server.client.port.<a href="org/apache/taverna/server/client/port/ObjectFactory.html" title="class in org.apache.taverna.server.client.port"><span class="typeNameLink">ObjectFactory</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.dsig.<a href="org/apache/taverna/server/usagerecord/xml/dsig/ObjectType.html" title="class in org.apache.taverna.server.usagerecord.xml.dsig"><span class="typeNameLink">ObjectType</span></a></li>
-<li type="circle">org.taverna.server.master.worker.<a href="org/taverna/server/master/worker/PasswordIssuer.html" title="class in org.taverna.server.master.worker"><span class="typeNameLink">PasswordIssuer</span></a></li>
+<li type="circle">org.apache.taverna.server.master.worker.<a href="org/apache/taverna/server/master/worker/PasswordIssuer.html" title="class in org.apache.taverna.server.master.worker"><span class="typeNameLink">PasswordIssuer</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/PermissionDescription.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">PermissionDescription</span></a></li>
-<li type="circle">org.taverna.server.master.rest.handler.<a href="org/taverna/server/master/rest/handler/PermissionHandler.html" title="class in org.taverna.server.master.rest.handler"><span class="typeNameLink">PermissionHandler</span></a> (implements javax.ws.rs.ext.MessageBodyReader&lt;T&gt;, javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
-<li type="circle">org.taverna.server.master.soap.<a href="org/taverna/server/master/soap/PermissionList.html" title="class in org.taverna.server.master.soap"><span class="typeNameLink">PermissionList</span></a></li>
-<li type="circle">org.taverna.server.master.soap.<a href="org/taverna/server/master/soap/PermissionList.SinglePermissionMapping.html" title="class in org.taverna.server.master.soap"><span class="typeNameLink">PermissionList.SinglePermissionMapping</span></a></li>
+<li type="circle">org.apache.taverna.server.master.rest.handler.<a href="org/apache/taverna/server/master/rest/handler/PermissionHandler.html" title="class in org.apache.taverna.server.master.rest.handler"><span class="typeNameLink">PermissionHandler</span></a> (implements javax.ws.rs.ext.MessageBodyReader&lt;T&gt;, javax.ws.rs.ext.MessageBodyWriter&lt;T&gt;)</li>
+<li type="circle">org.apache.taverna.server.master.soap.<a href="org/apache/taverna/server/master/soap/PermissionList.html" title="class in org.apache.taverna.server.master.soap"><span class="typeNameLink">PermissionList</span></a></li>
+<li type="circle">org.apache.taverna.server.master.soap.<a href="org/apache/taverna/server/master/soap/PermissionList.SinglePermissionMapping.html" title="class in org.apache.taverna.server.master.soap"><span class="typeNameLink">PermissionList.SinglePermissionMapping</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/PermittedListeners.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">PermittedListeners</span></a></li>
 <li type="circle">org.apache.taverna.server.client.rest.<a href="org/apache/taverna/server/client/rest/PermittedWorkflows.html" title="class in org.apache.taverna.server.client.rest"><span class="typeNameLink">PermittedWorkflows</span></a></li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.dsig.<a href="org/apache/taverna/server/usagerecord/xml/dsig/PGPDataType.html" title="class in org.apache.taverna.server.usagerecord.xml.dsig"><span class="typeNameLink">PGPDataType</span></a></li>
@@ -382,64 +382,64 @@
 </ul>
 </li>
 <li type="circle">org.apache.taverna.server.usagerecord.xml.urf.<a href="org/apache/taverna/server/usagerecord/xml/urf/Processors.html" title="class in org.apache.taverna.server.usagerecord.xml.urf"><span class="typeNameLink">Processors</span></a></li>

[... 569 lines stripped ...]